Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59582.t1 | RHN39760.1 | 96.7 | 575 | 19 | 0 | 1 | 575 | 1 | 575 | 0.00E+00 | 1119.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59582.t1 | A0A314KSQ4 | 69.4 | 575 | 175 | 1 | 1 | 574 | 5 | 579 | 1.3e-243 | 843.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59582.t1 | A0A396GF40 | 96.7 | 575 | 19 | 0 | 1 | 575 | 1 | 575 | 0.0e+00 | 1119.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene073214 | MS.gene59582 | PPI |
| MS.gene053964 | MS.gene59582 | PPI |
| MS.gene36841 | MS.gene59582 | PPI |
| MS.gene064168 | MS.gene59582 | PPI |
| MS.gene95748 | MS.gene59582 | PPI |
| MS.gene045936 | MS.gene59582 | PPI |
| MS.gene34650 | MS.gene59582 | PPI |
| MS.gene78774 | MS.gene59582 | PPI |
| MS.gene59582 | MS.gene046033 | PPI |
| MS.gene59582 | MS.gene99230 | PPI |
| MS.gene25516 | MS.gene59582 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59582.t1 | MTR_8g027920 | 96.522 | 575 | 20 | 0 | 1 | 575 | 1 | 575 | 0.0 | 1152 |
| MS.gene59582.t1 | MTR_8g027965 | 89.391 | 575 | 61 | 0 | 1 | 575 | 1 | 575 | 0.0 | 1071 |
| MS.gene59582.t1 | MTR_8g027955 | 88.348 | 575 | 67 | 0 | 1 | 575 | 8 | 582 | 0.0 | 1066 |
| MS.gene59582.t1 | MTR_8g027970 | 81.739 | 575 | 105 | 0 | 1 | 575 | 1 | 575 | 0.0 | 1002 |
| MS.gene59582.t1 | MTR_7g117110 | 75.130 | 579 | 140 | 1 | 1 | 575 | 1 | 579 | 0.0 | 927 |
| MS.gene59582.t1 | MTR_7g117110 | 72.771 | 415 | 105 | 2 | 1 | 411 | 1 | 411 | 0.0 | 635 |
| MS.gene59582.t1 | MTR_0102s0060 | 46.575 | 584 | 292 | 8 | 9 | 575 | 17 | 597 | 0.0 | 546 |
| MS.gene59582.t1 | MTR_5g016320 | 37.801 | 582 | 343 | 8 | 5 | 573 | 15 | 590 | 2.07e-141 | 422 |
| MS.gene59582.t1 | MTR_8g037720 | 62.928 | 321 | 93 | 2 | 259 | 575 | 137 | 435 | 4.30e-141 | 416 |
| MS.gene59582.t1 | MTR_8g037720 | 68.794 | 141 | 44 | 0 | 10 | 150 | 1 | 141 | 1.25e-56 | 196 |
| MS.gene59582.t1 | MTR_0035s0150 | 37.876 | 565 | 337 | 8 | 12 | 571 | 21 | 576 | 1.83e-134 | 404 |
| MS.gene59582.t1 | MTR_4g045903 | 36.395 | 577 | 343 | 8 | 11 | 572 | 30 | 597 | 1.69e-129 | 392 |
| MS.gene59582.t1 | MTR_8g467000 | 35.345 | 580 | 351 | 6 | 11 | 571 | 15 | 589 | 1.81e-128 | 389 |
| MS.gene59582.t1 | MTR_2g081860 | 35.849 | 583 | 347 | 6 | 11 | 571 | 14 | 591 | 7.09e-128 | 388 |
| MS.gene59582.t1 | MTR_1g047730 | 66.412 | 262 | 73 | 3 | 318 | 575 | 112 | 362 | 9.13e-121 | 361 |
| MS.gene59582.t1 | MTR_1g047730 | 44.937 | 158 | 42 | 3 | 10 | 166 | 1 | 114 | 2.42e-28 | 117 |
| MS.gene59582.t1 | MTR_1g088765 | 36.185 | 561 | 335 | 11 | 11 | 550 | 11 | 569 | 6.73e-116 | 357 |
| MS.gene59582.t1 | MTR_7g094190 | 33.391 | 575 | 348 | 14 | 11 | 561 | 5 | 568 | 1.11e-91 | 293 |
| MS.gene59582.t1 | MTR_1g088765 | 39.062 | 384 | 214 | 9 | 185 | 550 | 44 | 425 | 1.86e-85 | 273 |
| MS.gene59582.t1 | MTR_7g094190 | 32.427 | 478 | 291 | 13 | 105 | 561 | 2 | 468 | 3.38e-68 | 229 |
| MS.gene59582.t1 | MTR_7g094330 | 32.468 | 308 | 167 | 8 | 105 | 404 | 2 | 276 | 1.41e-38 | 143 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59582.t1 | AT2G46370 | 65.858 | 577 | 192 | 4 | 1 | 574 | 12 | 586 | 0.0 | 806 |
| MS.gene59582.t1 | AT2G46370 | 65.858 | 577 | 192 | 4 | 1 | 574 | 1 | 575 | 0.0 | 806 |
| MS.gene59582.t1 | AT2G46370 | 65.858 | 577 | 192 | 4 | 1 | 574 | 1 | 575 | 0.0 | 806 |
| MS.gene59582.t1 | AT2G46370 | 66.867 | 498 | 162 | 2 | 78 | 574 | 1 | 496 | 0.0 | 721 |
| MS.gene59582.t1 | AT4G03400 | 48.889 | 585 | 277 | 8 | 11 | 575 | 9 | 591 | 0.0 | 563 |
| MS.gene59582.t1 | AT4G03400 | 48.889 | 585 | 277 | 8 | 11 | 575 | 9 | 591 | 0.0 | 563 |
| MS.gene59582.t1 | AT2G23170 | 38.772 | 570 | 336 | 7 | 12 | 573 | 21 | 585 | 6.22e-141 | 421 |
| MS.gene59582.t1 | AT4G37390 | 38.609 | 575 | 333 | 9 | 12 | 571 | 22 | 591 | 1.30e-138 | 416 |
| MS.gene59582.t1 | AT4G27260 | 37.479 | 595 | 342 | 7 | 2 | 571 | 7 | 596 | 8.89e-138 | 414 |
| MS.gene59582.t1 | AT1G23160 | 37.889 | 578 | 333 | 10 | 9 | 572 | 13 | 578 | 7.96e-137 | 410 |
| MS.gene59582.t1 | AT2G14960 | 38.246 | 570 | 333 | 9 | 12 | 573 | 21 | 579 | 2.14e-135 | 407 |
| MS.gene59582.t1 | AT1G59500 | 39.123 | 570 | 331 | 9 | 12 | 571 | 22 | 585 | 9.91e-134 | 402 |
| MS.gene59582.t1 | AT5G13320 | 37.478 | 579 | 338 | 10 | 8 | 571 | 5 | 574 | 3.82e-133 | 400 |
| MS.gene59582.t1 | AT5G13320 | 37.478 | 579 | 338 | 10 | 8 | 571 | 5 | 574 | 3.82e-133 | 400 |
| MS.gene59582.t1 | AT5G13320 | 37.478 | 579 | 338 | 10 | 8 | 571 | 20 | 589 | 6.50e-133 | 400 |
| MS.gene59582.t1 | AT1G48660 | 36.684 | 567 | 342 | 8 | 14 | 571 | 7 | 565 | 3.62e-132 | 398 |
| MS.gene59582.t1 | AT1G48660 | 36.667 | 570 | 341 | 9 | 14 | 571 | 7 | 568 | 9.60e-132 | 397 |
| MS.gene59582.t1 | AT5G54510 | 37.043 | 575 | 336 | 8 | 17 | 571 | 28 | 596 | 9.46e-130 | 393 |
| MS.gene59582.t1 | AT5G51470 | 37.370 | 578 | 341 | 9 | 3 | 571 | 6 | 571 | 5.64e-127 | 385 |
| MS.gene59582.t1 | AT5G13360 | 37.629 | 582 | 333 | 12 | 9 | 571 | 9 | 579 | 2.40e-122 | 373 |
| MS.gene59582.t1 | AT5G13360 | 37.629 | 582 | 333 | 12 | 9 | 571 | 9 | 579 | 2.40e-122 | 373 |
| MS.gene59582.t1 | AT5G13360 | 37.629 | 582 | 333 | 12 | 9 | 571 | 87 | 657 | 2.12e-121 | 373 |
| MS.gene59582.t1 | AT5G13370 | 36.116 | 587 | 349 | 12 | 4 | 571 | 1 | 580 | 9.45e-121 | 369 |
| MS.gene59582.t1 | AT5G13350 | 35.533 | 591 | 347 | 15 | 4 | 571 | 1 | 580 | 1.77e-120 | 368 |
| MS.gene59582.t1 | AT5G13350 | 35.533 | 591 | 347 | 15 | 4 | 571 | 1 | 580 | 1.77e-120 | 368 |
| MS.gene59582.t1 | AT2G47750 | 36.552 | 580 | 350 | 10 | 5 | 571 | 3 | 577 | 4.59e-118 | 362 |
| MS.gene59582.t1 | AT5G13380 | 36.189 | 572 | 339 | 12 | 17 | 571 | 47 | 609 | 1.06e-115 | 357 |
| MS.gene59582.t1 | AT1G28130 | 34.391 | 599 | 346 | 12 | 9 | 571 | 9 | 596 | 3.87e-113 | 350 |
| MS.gene59582.t1 | AT5G51470 | 36.853 | 483 | 289 | 6 | 98 | 571 | 6 | 481 | 1.81e-101 | 316 |
| MS.gene59582.t1 | AT1G48670 | 32.509 | 566 | 314 | 11 | 16 | 571 | 10 | 517 | 7.10e-101 | 315 |
| MS.gene59582.t1 | AT1G48670 | 35.539 | 408 | 249 | 6 | 172 | 571 | 5 | 406 | 6.53e-90 | 283 |
| MS.gene59582.t1 | AT1G28130 | 36.905 | 420 | 222 | 9 | 185 | 571 | 44 | 453 | 1.79e-86 | 276 |
| MS.gene59582.t1 | AT1G48690 | 34.197 | 193 | 112 | 4 | 14 | 200 | 7 | 190 | 2.77e-24 | 100 |
Find 116 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTAAGGCCTTGCCATTT+TGG | 0.173440 | 8.3:-65848089 | None:intergenic |
| ACACATGCCTTGAAGCTTTC+AGG | 0.188228 | 8.3:-65847178 | None:intergenic |
| GGAAACACTGAAGAAGATTT+TGG | 0.215335 | 8.3:+65847099 | MS.gene59582:CDS |
| CCTAATGCTAAGTATGTTCT+AGG | 0.223934 | 8.3:+65848558 | MS.gene59582:CDS |
| CAGGACACTATGTTATCTTT+TGG | 0.231173 | 8.3:+65850167 | MS.gene59582:CDS |
| AACATAGTGTCCTGGTTCTT+TGG | 0.254133 | 8.3:-65850158 | None:intergenic |
| TCAGAACCTTTGAACAAGTT+TGG | 0.258443 | 8.3:+65848364 | MS.gene59582:CDS |
| CCTTTGGTGACTTCTGAGTA+TGG | 0.268418 | 8.3:+65848642 | MS.gene59582:CDS |
| TAGAGTGATTGGTGAAAATT+AGG | 0.278144 | 8.3:-65848258 | None:intergenic |
| ATTGGTCACTTACAAAGATT+TGG | 0.278435 | 8.3:+65847204 | MS.gene59582:CDS |
| CTTGAACATTATGTTGGATT+AGG | 0.286844 | 8.3:+65850346 | MS.gene59582:CDS |
| CATAATGTTCAAGAATCTTC+TGG | 0.290500 | 8.3:-65850336 | None:intergenic |
| CCTAGAACATACTTAGCATT+AGG | 0.297424 | 8.3:-65848558 | None:intergenic |
| GCAAACTCAGGAGCCACTTT+AGG | 0.305629 | 8.3:-65848699 | None:intergenic |
| AGGGGATGTGGTAAGGGTTA+TGG | 0.307891 | 8.3:+65849961 | MS.gene59582:CDS |
| ATTCCTTTGAATCAACTTGA+TGG | 0.320686 | 8.3:+65848762 | MS.gene59582:CDS |
| CAGAACCTTTGAACAAGTTT+GGG | 0.324841 | 8.3:+65848365 | MS.gene59582:CDS |
| GGGGATGTGGTAAGGGTTAT+GGG | 0.337169 | 8.3:+65849962 | MS.gene59582:CDS |
| TGGATCAAGTTAGCTAGTTC+AGG | 0.340099 | 8.3:-65848483 | None:intergenic |
| TCAACTATTCTATTGATATA+AGG | 0.342032 | 8.3:-65847229 | None:intergenic |
| CTTGAGCCAGTGGGGTTAAC+TGG | 0.350859 | 8.3:+65848798 | MS.gene59582:CDS |
| GTTGTTAGCTGAAGAGAAAA+TGG | 0.368303 | 8.3:+65850102 | MS.gene59582:CDS |
| TTCATTGCATGCTTGTATCC+TGG | 0.373701 | 8.3:-65848189 | None:intergenic |
| AAGTTAGCTAGTTCAGGATT+TGG | 0.373912 | 8.3:-65848477 | None:intergenic |
| GCTGAATACTTGCAGAGTTT+AGG | 0.375997 | 8.3:+65847136 | MS.gene59582:CDS |
| TGATGAATGTTGCACATGTT+TGG | 0.385814 | 8.3:+65850222 | MS.gene59582:CDS |
| CAAAGTGTTGCAAATATTGT+TGG | 0.386965 | 8.3:+65850420 | MS.gene59582:CDS |
| AACTGATCCTGAAAGCTTCA+AGG | 0.401122 | 8.3:+65847171 | MS.gene59582:CDS |
| AGAGAGTTTCCTATCCAAAA+TGG | 0.404103 | 8.3:+65848075 | MS.gene59582:intron |
| AATGCATAGGATTGAGCAAT+TGG | 0.406780 | 8.3:+65848511 | MS.gene59582:CDS |
| GTGCAGGCTTATACAGATAT+AGG | 0.409763 | 8.3:+65849936 | MS.gene59582:intron |
| CTAGAACATACTTAGCATTA+GGG | 0.409837 | 8.3:-65848557 | None:intergenic |
| AGTATGGTTCTTCTGAAGGT+TGG | 0.412179 | 8.3:+65848658 | MS.gene59582:CDS |
| TCCGAACAAGTCGGAGTTCA+AGG | 0.425031 | 8.3:-65850303 | None:intergenic |
| CAATCACTGCTATCTCCTTA+AGG | 0.427592 | 8.3:+65847284 | MS.gene59582:CDS |
| CTTAAGGAGATAGCAGTGAT+TGG | 0.436756 | 8.3:-65847283 | None:intergenic |
| GCAAACTATCACAAGCTAAA+GGG | 0.436897 | 8.3:+65848124 | MS.gene59582:CDS |
| CCTGTTCCTAAAGGCAAAAG+AGG | 0.441171 | 8.3:-65847495 | None:intergenic |
| CAACAATATTTGCAACACTT+TGG | 0.447856 | 8.3:-65850419 | None:intergenic |
| GAATCAACTTGATGGAACTA+AGG | 0.452348 | 8.3:+65848770 | MS.gene59582:CDS |
| TCTGAGTATGGTTCTTCTGA+AGG | 0.455124 | 8.3:+65848654 | MS.gene59582:CDS |
| TATATCAATAGAATAGTTGA+TGG | 0.455629 | 8.3:+65847232 | MS.gene59582:CDS |
| ATGAAAGCACTTCAATCTCC+TGG | 0.455873 | 8.3:+65848207 | MS.gene59582:CDS |
| TGCAACACTTTGGTGTTTGT+AGG | 0.456160 | 8.3:-65850409 | None:intergenic |
| CAATGTTGATAGTAAGCATA+AGG | 0.460464 | 8.3:-65850030 | None:intergenic |
| CTATGCAGGAGAGGTTCCTT+TGG | 0.461737 | 8.3:+65848626 | MS.gene59582:CDS |
| AAGATTCTTGAACATTATGT+TGG | 0.462415 | 8.3:+65850340 | MS.gene59582:CDS |
| AATTCAAAGTAAGCAATTTG+AGG | 0.463474 | 8.3:-65848738 | None:intergenic |
| TTGCAGAGTTTAGGACTCAA+TGG | 0.466761 | 8.3:+65847145 | MS.gene59582:CDS |
| CAGATATAGGCTAGGGGATG+TGG | 0.467515 | 8.3:+65849949 | MS.gene59582:CDS |
| ATAGGCTAGGGGATGTGGTA+AGG | 0.468129 | 8.3:+65849954 | MS.gene59582:CDS |
| GTTCCATCAAGTTGATTCAA+AGG | 0.473335 | 8.3:-65848765 | None:intergenic |
| CCCTTGAACTCCGACTTGTT+CGG | 0.477568 | 8.3:+65850302 | MS.gene59582:CDS |
| GAGAGGCTAACAAAGGATGC+TGG | 0.479734 | 8.3:+65847064 | MS.gene59582:CDS |
| GCTGCTGTAGATGAAGCTTA+AGG | 0.486505 | 8.3:-65848103 | None:intergenic |
| AGGGATCATGACAGGTTCAA+TGG | 0.486740 | 8.3:+65848578 | MS.gene59582:CDS |
| TGTAGTTCTGGTACTAGTCA+AGG | 0.489759 | 8.3:+65847410 | MS.gene59582:intron |
| AGCAAACTATCACAAGCTAA+AGG | 0.491878 | 8.3:+65848123 | MS.gene59582:CDS |
| GCCAATGTATTCAGAAATCC+AGG | 0.494020 | 8.3:+65848171 | MS.gene59582:CDS |
| AGAGGTGGCAGTAGAGTGAT+TGG | 0.496209 | 8.3:-65848269 | None:intergenic |
| GAAGATTGGTGAAGATTATG+AGG | 0.505123 | 8.3:+65848824 | MS.gene59582:CDS |
| CTCTACTGCCACCTCTTATG+TGG | 0.505432 | 8.3:+65848276 | MS.gene59582:CDS |
| TAGGCTAGGGGATGTGGTAA+GGG | 0.506564 | 8.3:+65849955 | MS.gene59582:CDS |
| TGCAAAGCAGTCCACATAAG+AGG | 0.507954 | 8.3:-65848287 | None:intergenic |
| GGATGCTGGGAATGTTCAAA+AGG | 0.507958 | 8.3:+65847078 | MS.gene59582:CDS |
| GACATAGCAGTTCTAATGGA+TGG | 0.509602 | 8.3:-65848441 | None:intergenic |
| CTTCAAGGCATGTGTTCCAT+TGG | 0.511917 | 8.3:+65847186 | MS.gene59582:CDS |
| TTCAAATGTGAATCCTAAAG+TGG | 0.512193 | 8.3:+65848686 | MS.gene59582:CDS |
| TTCTTCCCAAACTTGTTCAA+AGG | 0.512345 | 8.3:-65848370 | None:intergenic |
| TCAAACAATTCATCATTCCA+TGG | 0.514252 | 8.3:-65847449 | None:intergenic |
| ATAGTAATACCTGTTCCTAA+AGG | 0.516100 | 8.3:-65847504 | None:intergenic |
| ACATCATGAGGGCTGCATCC+AGG | 0.523792 | 8.3:-65848225 | None:intergenic |
| TCAATCCTATGCATTTCTTG+TGG | 0.525426 | 8.3:-65848503 | None:intergenic |
| CTTATTACTGACATCAAAGA+AGG | 0.535229 | 8.3:+65848393 | MS.gene59582:CDS |
| ATTTCTGAATACATTGGCTG+TGG | 0.541655 | 8.3:-65848166 | None:intergenic |
| GCTTATACAGATATAGGCTA+GGG | 0.552915 | 8.3:+65849942 | MS.gene59582:CDS |
| CCGAACAAGTCGGAGTTCAA+GGG | 0.559483 | 8.3:-65850302 | None:intergenic |
| AGAGGCTAACAAAGGATGCT+GGG | 0.561325 | 8.3:+65847065 | MS.gene59582:CDS |
| GGGTTAACTGGTGTGAAGAT+TGG | 0.563355 | 8.3:+65848810 | MS.gene59582:CDS |
| CAATTGGTATGGATTGATAC+CGG | 0.565341 | 8.3:+65848527 | MS.gene59582:CDS |
| AAGGTAGAGCTTGAGCCAGT+GGG | 0.565600 | 8.3:+65848789 | MS.gene59582:CDS |
| AAATCTTTGTAAGTGACCAA+TGG | 0.572733 | 8.3:-65847202 | None:intergenic |
| TTCACACCAGTTAACCCCAC+TGG | 0.574263 | 8.3:-65848804 | None:intergenic |
| CAAAAGATAACATAGTGTCC+TGG | 0.574844 | 8.3:-65850166 | None:intergenic |
| GGCTTATACAGATATAGGCT+AGG | 0.576800 | 8.3:+65849941 | MS.gene59582:intron |
| TCCTGGATTTCTGAATACAT+TGG | 0.580005 | 8.3:-65848172 | None:intergenic |
| TAAGGTAGAGCTTGAGCCAG+TGG | 0.580352 | 8.3:+65848788 | MS.gene59582:CDS |
| TTTCTCTTCAGCTAACAACA+TGG | 0.580961 | 8.3:-65850098 | None:intergenic |
| CAAACTATCACAAGCTAAAG+GGG | 0.586566 | 8.3:+65848125 | MS.gene59582:CDS |
| TTGATCCACAAGAAATGCAT+AGG | 0.591375 | 8.3:+65848498 | MS.gene59582:CDS |
| CTAATGCTAAGTATGTTCTA+GGG | 0.593411 | 8.3:+65848559 | MS.gene59582:CDS |
| GAATGATTTACAATTATCAG+TGG | 0.599036 | 8.3:+65850066 | MS.gene59582:CDS |
| AAGTGATAGAAGAATTTGAG+AGG | 0.600729 | 8.3:+65847047 | MS.gene59582:CDS |
| TATGTTCTAGGGATCATGAC+AGG | 0.608440 | 8.3:+65848570 | MS.gene59582:CDS |
| ACAACATAAGTAGCAAACTC+AGG | 0.609304 | 8.3:-65848711 | None:intergenic |
| GGACTGAATATCACATCATG+AGG | 0.611298 | 8.3:-65848237 | None:intergenic |
| GTTAGTTCTAGAAAAGTCAA+AGG | 0.611504 | 8.3:+65850271 | MS.gene59582:CDS |
| TTAGCATTAGGGAAAAGCTC+CGG | 0.616345 | 8.3:-65848546 | None:intergenic |
| AATAATTGAGAAATTTGACA+TGG | 0.619152 | 8.3:+65847021 | MS.gene59582:CDS |
| ATAGGATTGAGCAATTGGTA+TGG | 0.622644 | 8.3:+65848516 | MS.gene59582:CDS |
| TAGAAAAGTCAAAGGTATTG+CGG | 0.623191 | 8.3:+65850279 | MS.gene59582:CDS |
| GAACTCCGACTTGTTCGGAA+AGG | 0.630222 | 8.3:+65850307 | MS.gene59582:CDS |
| AGAATTTGAGAGGCTAACAA+AGG | 0.640125 | 8.3:+65847057 | MS.gene59582:CDS |
| ATGTTCCTTTCCGAACAAGT+CGG | 0.642426 | 8.3:-65850312 | None:intergenic |
| GTTTCCTATCCAAAATGGCA+AGG | 0.646453 | 8.3:+65848080 | MS.gene59582:CDS |
| GTTGAGACACTATGCAGGAG+AGG | 0.647395 | 8.3:+65848617 | MS.gene59582:CDS |
| TGAGTCAGTTCAAGACACCT+AGG | 0.648473 | 8.3:+65850377 | MS.gene59582:CDS |
| TTTGTAGGAGCAACACACCT+AGG | 0.657654 | 8.3:-65850394 | None:intergenic |
| ATTGATTTATCCAAAGAACC+AGG | 0.665402 | 8.3:+65850148 | MS.gene59582:CDS |
| CCATACTCAGAAGTCACCAA+AGG | 0.666038 | 8.3:-65848642 | None:intergenic |
| AAAGCAGTCCACATAAGAGG+TGG | 0.677682 | 8.3:-65848284 | None:intergenic |
| GACTGAATATCACATCATGA+GGG | 0.679391 | 8.3:-65848236 | None:intergenic |
| CTTATACAGATATAGGCTAG+GGG | 0.689485 | 8.3:+65849943 | MS.gene59582:CDS |
| AGGTAGAGCTTGAGCCAGTG+GGG | 0.703294 | 8.3:+65848790 | MS.gene59582:CDS |
| AAACTATCACAAGCTAAAGG+GGG | 0.711603 | 8.3:+65848126 | MS.gene59582:CDS |
| GGTTTGATATATCTGCACTG+TGG | 0.735598 | 8.3:-65847474 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAACTAATTTATAAAATGAT+AGG | - | chr8.3:65849042-65849061 | None:intergenic | 10.0% |
| !! | AACATAATTAGACTTAATAA+AGG | - | chr8.3:65849893-65849912 | None:intergenic | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | + | chr8.3:65849746-65849765 | MS.gene59582:intron | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | + | chr8.3:65849745-65849764 | MS.gene59582:intron | 15.0% |
| !!! | AAGAAAAGTGTATAAATAAA+GGG | + | chr8.3:65849681-65849700 | MS.gene59582:intron | 15.0% |
| !!! | ACTTTTCATTTTTATTGTAT+GGG | + | chr8.3:65849475-65849494 | MS.gene59582:intron | 15.0% |
| !!! | TAAGAAAAGTGTATAAATAA+AGG | + | chr8.3:65849680-65849699 | MS.gene59582:intron | 15.0% |
| !!! | TACTTTTCATTTTTATTGTA+TGG | + | chr8.3:65849474-65849493 | MS.gene59582:intron | 15.0% |
| !!! | TTCATTTTATAAATCATTAC+TGG | + | chr8.3:65847665-65847684 | MS.gene59582:intron | 15.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | + | chr8.3:65849705-65849724 | MS.gene59582:intron | 20.0% |
| !! | AATAATTGAGAAATTTGACA+TGG | + | chr8.3:65847021-65847040 | MS.gene59582:CDS | 20.0% |
| !! | CTTAAGAAGAGAAAAAAAAA+AGG | - | chr8.3:65848893-65848912 | None:intergenic | 20.0% |
| !! | TATAAATTAGTTAATGTGTC+AGG | + | chr8.3:65849049-65849068 | MS.gene59582:intron | 20.0% |
| !! | TATATCAATAGAATAGTTGA+TGG | + | chr8.3:65847232-65847251 | MS.gene59582:CDS | 20.0% |
| !! | TCAACTATTCTATTGATATA+AGG | - | chr8.3:65847232-65847251 | None:intergenic | 20.0% |
| !!! | AGAAAAGTGTATAAATAAAG+GGG | + | chr8.3:65849682-65849701 | MS.gene59582:intron | 20.0% |
| !!! | CTTCTTTTTAAAAACATCAT+CGG | + | chr8.3:65847874-65847893 | MS.gene59582:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | + | chr8.3:65849815-65849834 | MS.gene59582:intron | 20.0% |
| !!! | TATTAGTCCCTAAATATTTT+AGG | - | chr8.3:65848990-65849009 | None:intergenic | 20.0% |
| !!! | TCTCTAAAGTATAAAAAAAC+CGG | - | chr8.3:65849016-65849035 | None:intergenic | 20.0% |
| !!! | TTATGTTTTGTTTTTGTCTA+GGG | + | chr8.3:65849159-65849178 | MS.gene59582:intron | 20.0% |
| !!! | TTTATGTTTTGTTTTTGTCT+AGG | + | chr8.3:65849158-65849177 | MS.gene59582:intron | 20.0% |
| ! | AAACTTTCAATATCAAGTGT+CGG | + | chr8.3:65847995-65848014 | MS.gene59582:intron | 25.0% |
| ! | AAGATTCTTGAACATTATGT+TGG | + | chr8.3:65850340-65850359 | MS.gene59582:CDS | 25.0% |
| ! | AATTATGGAGGAATTGATTA+GGG | + | chr8.3:65849372-65849391 | MS.gene59582:intron | 25.0% |
| ! | AATTCAAAGTAAGCAATTTG+AGG | - | chr8.3:65848741-65848760 | None:intergenic | 25.0% |
| ! | AGAGACTACCTAAAATATTT+AGG | + | chr8.3:65848979-65848998 | MS.gene59582:intron | 25.0% |
| ! | AGTTGTATTGAGAATTGAAA+TGG | + | chr8.3:65849778-65849797 | MS.gene59582:intron | 25.0% |
| ! | ATGTTAGTGACAATTAATCT+TGG | + | chr8.3:65849908-65849927 | MS.gene59582:intron | 25.0% |
| ! | GAAAGCAAAAATATATACCA+TGG | + | chr8.3:65847432-65847451 | MS.gene59582:CDS | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | + | chr8.3:65849704-65849723 | MS.gene59582:intron | 25.0% |
| ! | GAATGATTTACAATTATCAG+TGG | + | chr8.3:65850066-65850085 | MS.gene59582:CDS | 25.0% |
| ! | GAGACTACCTAAAATATTTA+GGG | + | chr8.3:65848980-65848999 | MS.gene59582:intron | 25.0% |
| ! | GGATACAAATTACCTAAATT+TGG | - | chr8.3:65849561-65849580 | None:intergenic | 25.0% |
| ! | GGTACATATTTAATGTGATT+AGG | - | chr8.3:65849607-65849626 | None:intergenic | 25.0% |
| ! | GTAATTAAATATTGAGTGAG+TGG | + | chr8.3:65849347-65849366 | MS.gene59582:intron | 25.0% |
| ! | GTTGTATTGAGAATTGAAAT+GGG | + | chr8.3:65849779-65849798 | MS.gene59582:intron | 25.0% |
| ! | TACATAACAAATGTTACACA+AGG | + | chr8.3:65849433-65849452 | MS.gene59582:intron | 25.0% |
| ! | TATTTAGGGACTAATATAAC+CGG | + | chr8.3:65848994-65849013 | MS.gene59582:intron | 25.0% |
| ! | TTTCTCTTCTTAAGATGTTA+GGG | + | chr8.3:65848899-65848918 | MS.gene59582:intron | 25.0% |
| !! | ATATACTAGTAGTGTGTTTT+TGG | + | chr8.3:65849286-65849305 | MS.gene59582:intron | 25.0% |
| !! | CATTTTTATTGTATGGGATT+GGG | + | chr8.3:65849481-65849500 | MS.gene59582:intron | 25.0% |
| !! | CTTGATATTGAAAGTTTGTT+TGG | - | chr8.3:65847992-65848011 | None:intergenic | 25.0% |
| !! | TTAATGTATTGATGCTATGT+AGG | - | chr8.3:65847570-65847589 | None:intergenic | 25.0% |
| !! | TTTTCTCTTCTTAAGATGTT+AGG | + | chr8.3:65848898-65848917 | MS.gene59582:intron | 25.0% |
| !!! | ATAAATATTTTAGTACCTGC+AGG | - | chr8.3:65848864-65848883 | None:intergenic | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | + | chr8.3:65849814-65849833 | MS.gene59582:intron | 25.0% |
| !!! | TCATTTTTATTGTATGGGAT+TGG | + | chr8.3:65849480-65849499 | MS.gene59582:intron | 25.0% |
| AAAGGTGAGAAAATTTCACT+AGG | - | chr8.3:65849875-65849894 | None:intergenic | 30.0% | |
| AAATCTTTGTAAGTGACCAA+TGG | - | chr8.3:65847205-65847224 | None:intergenic | 30.0% | |
| AAGAATATAATCAACTGTGC+TGG | - | chr8.3:65849138-65849157 | None:intergenic | 30.0% | |
| AAGTGATAGAAGAATTTGAG+AGG | + | chr8.3:65847047-65847066 | MS.gene59582:CDS | 30.0% | |
| ATAGTAATACCTGTTCCTAA+AGG | - | chr8.3:65847507-65847526 | None:intergenic | 30.0% | |
| ATGTACTTTGTTCCTTATGT+AGG | - | chr8.3:65849583-65849602 | None:intergenic | 30.0% | |
| ATGTTAGGGACTAATATGAT+GGG | + | chr8.3:65848913-65848932 | MS.gene59582:intron | 30.0% | |
| ATTAATCTTGGATAATGTGC+AGG | + | chr8.3:65849920-65849939 | MS.gene59582:intron | 30.0% | |
| ATTCCTTTGAATCAACTTGA+TGG | + | chr8.3:65848762-65848781 | MS.gene59582:CDS | 30.0% | |
| ATTGGTCACTTACAAAGATT+TGG | + | chr8.3:65847204-65847223 | MS.gene59582:CDS | 30.0% | |
| CAAAAATCAAGTTTCTTCGT+AGG | + | chr8.3:65850002-65850021 | MS.gene59582:CDS | 30.0% | |
| CAACAATATTTGCAACACTT+TGG | - | chr8.3:65850422-65850441 | None:intergenic | 30.0% | |
| CAATTATGGAGGAATTGATT+AGG | + | chr8.3:65849371-65849390 | MS.gene59582:intron | 30.0% | |
| CATAATGTTCAAGAATCTTC+TGG | - | chr8.3:65850339-65850358 | None:intergenic | 30.0% | |
| CTAATGCTAAGTATGTTCTA+GGG | + | chr8.3:65848559-65848578 | MS.gene59582:CDS | 30.0% | |
| CTACTTTGTTCTGTTACAAT+GGG | + | chr8.3:65849101-65849120 | MS.gene59582:intron | 30.0% | |
| CTAGAACATACTTAGCATTA+GGG | - | chr8.3:65848560-65848579 | None:intergenic | 30.0% | |
| CTTATTACTGACATCAAAGA+AGG | + | chr8.3:65848393-65848412 | MS.gene59582:CDS | 30.0% | |
| CTTGAACATTATGTTGGATT+AGG | + | chr8.3:65850346-65850365 | MS.gene59582:CDS | 30.0% | |
| TAAATTGAAGTCACCTTTGA+CGG | + | chr8.3:65847587-65847606 | MS.gene59582:intron | 30.0% | |
| TAGAGTGATTGGTGAAAATT+AGG | - | chr8.3:65848261-65848280 | None:intergenic | 30.0% | |
| TCAAACAATTCATCATTCCA+TGG | - | chr8.3:65847452-65847471 | None:intergenic | 30.0% | |
| TGTACTTTGTTCCTTATGTA+GGG | - | chr8.3:65849582-65849601 | None:intergenic | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | + | chr8.3:65849689-65849708 | MS.gene59582:intron | 30.0% | |
| TTCAAATGTGAATCCTAAAG+TGG | + | chr8.3:65848686-65848705 | MS.gene59582:CDS | 30.0% | |
| ! | AGAGTGGTTATTGTGAATTT+TGG | + | chr8.3:65849190-65849209 | MS.gene59582:intron | 30.0% |
| ! | AGGACACTATGTTATCTTTT+GGG | + | chr8.3:65850168-65850187 | MS.gene59582:CDS | 30.0% |
| ! | ATTGATTTATCCAAAGAACC+AGG | + | chr8.3:65850148-65850167 | MS.gene59582:CDS | 30.0% |
| ! | CTACGAAGAAACTTGATTTT+TGG | - | chr8.3:65850004-65850023 | None:intergenic | 30.0% |
| ! | GATAAAGCTTTTAGCACAAA+TGG | + | chr8.3:65849407-65849426 | MS.gene59582:intron | 30.0% |
| ! | GTAATTTGTATCCCTACATA+AGG | + | chr8.3:65849568-65849587 | MS.gene59582:intron | 30.0% |
| ! | TTGAAATGGGTCAGTTATTT+TGG | + | chr8.3:65849792-65849811 | MS.gene59582:intron | 30.0% |
| !! | AACTTGTGTTTTTGTAGTTC+TGG | + | chr8.3:65847398-65847417 | MS.gene59582:intron | 30.0% |
| !! | ATGAAGCATTGACACTTAAA+TGG | - | chr8.3:65847905-65847924 | None:intergenic | 30.0% |
| !! | CAAAGTGTTGCAAATATTGT+TGG | + | chr8.3:65850420-65850439 | MS.gene59582:CDS | 30.0% |
| !! | CAATGTTGATAGTAAGCATA+AGG | - | chr8.3:65850033-65850052 | None:intergenic | 30.0% |
| !! | GTTAGTTCTAGAAAAGTCAA+AGG | + | chr8.3:65850271-65850290 | MS.gene59582:CDS | 30.0% |
| !! | TAGAAAAGTCAAAGGTATTG+CGG | + | chr8.3:65850279-65850298 | MS.gene59582:CDS | 30.0% |
| !! | TGAAATGGGTCAGTTATTTT+GGG | + | chr8.3:65849793-65849812 | MS.gene59582:intron | 30.0% |
| !! | TTTTGACATAGCAGTTCTAA+TGG | - | chr8.3:65848448-65848467 | None:intergenic | 30.0% |
| !!! | AAGAGTGTTTTCATACCTTA+AGG | - | chr8.3:65847302-65847321 | None:intergenic | 30.0% |
| !!! | ATGATGGGTTTTCATACTTT+AGG | + | chr8.3:65848928-65848947 | MS.gene59582:intron | 30.0% |
| !!! | CAACTTTTTCACATTCAACT+GGG | - | chr8.3:65847341-65847360 | None:intergenic | 30.0% |
| !!! | GTGTTTTTGGAAAGATTGAA+TGG | + | chr8.3:65849299-65849318 | MS.gene59582:intron | 30.0% |
| !!! | TCAACTTTTTCACATTCAAC+TGG | - | chr8.3:65847342-65847361 | None:intergenic | 30.0% |
| !!! | TGATTTTTGGAGTTGAGTTA+TGG | - | chr8.3:65849991-65850010 | None:intergenic | 30.0% |
| AAAAAGTTGAGACACTATGC+AGG | + | chr8.3:65848612-65848631 | MS.gene59582:CDS | 35.0% | |
| AAACTATCACAAGCTAAAGG+GGG | + | chr8.3:65848126-65848145 | MS.gene59582:CDS | 35.0% | |
| AAGTTAGCTAGTTCAGGATT+TGG | - | chr8.3:65848480-65848499 | None:intergenic | 35.0% | |
| AATGCATAGGATTGAGCAAT+TGG | + | chr8.3:65848511-65848530 | MS.gene59582:CDS | 35.0% | |
| ACAACATAAGTAGCAAACTC+AGG | - | chr8.3:65848714-65848733 | None:intergenic | 35.0% | |
| ACCTAAATTTGGTCCCATAA+AGG | - | chr8.3:65849550-65849569 | None:intergenic | 35.0% | |
| ACCTTTATGGGACCAAATTT+AGG | + | chr8.3:65849546-65849565 | MS.gene59582:intron | 35.0% | |
| ACGCGTCAATAATGTTTCAT+AGG | - | chr8.3:65847940-65847959 | None:intergenic | 35.0% | |
| AGAAAATGGGTCAGATATTC+CGG | + | chr8.3:65849828-65849847 | MS.gene59582:intron | 35.0% | |
| AGAATTTGAGAGGCTAACAA+AGG | + | chr8.3:65847057-65847076 | MS.gene59582:CDS | 35.0% | |
| AGAGAGTTTCCTATCCAAAA+TGG | + | chr8.3:65848075-65848094 | MS.gene59582:intron | 35.0% | |
| AGCAAACTATCACAAGCTAA+AGG | + | chr8.3:65848123-65848142 | MS.gene59582:CDS | 35.0% | |
| ATAGGAAACTCTCTGCATAA+TGG | - | chr8.3:65848069-65848088 | None:intergenic | 35.0% | |
| ATAGGATTGAGCAATTGGTA+TGG | + | chr8.3:65848516-65848535 | MS.gene59582:CDS | 35.0% | |
| ATTGAGTGAGTGGACAATTA+TGG | + | chr8.3:65849357-65849376 | MS.gene59582:intron | 35.0% | |
| CAAAAGATAACATAGTGTCC+TGG | - | chr8.3:65850169-65850188 | None:intergenic | 35.0% | |
| CAAACTATCACAAGCTAAAG+GGG | + | chr8.3:65848125-65848144 | MS.gene59582:CDS | 35.0% | |
| CAGAACCTTTGAACAAGTTT+GGG | + | chr8.3:65848365-65848384 | MS.gene59582:CDS | 35.0% | |
| CCTAATGCTAAGTATGTTCT+AGG | + | chr8.3:65848558-65848577 | MS.gene59582:CDS | 35.0% | |
| CCTAGAACATACTTAGCATT+AGG | - | chr8.3:65848561-65848580 | None:intergenic | 35.0% | |
| CTTATACAGATATAGGCTAG+GGG | + | chr8.3:65849943-65849962 | MS.gene59582:CDS | 35.0% | |
| GAAGATTGGTGAAGATTATG+AGG | + | chr8.3:65848824-65848843 | MS.gene59582:CDS | 35.0% | |
| GAATCAACTTGATGGAACTA+AGG | + | chr8.3:65848770-65848789 | MS.gene59582:CDS | 35.0% | |
| GACTGAATATCACATCATGA+GGG | - | chr8.3:65848239-65848258 | None:intergenic | 35.0% | |
| GATGTTAGGGACTAATATGA+TGG | + | chr8.3:65848912-65848931 | MS.gene59582:intron | 35.0% | |
| GCAAACTATCACAAGCTAAA+GGG | + | chr8.3:65848124-65848143 | MS.gene59582:CDS | 35.0% | |
| GCTTATACAGATATAGGCTA+GGG | + | chr8.3:65849942-65849961 | MS.gene59582:CDS | 35.0% | |
| GTTGTTAGCTGAAGAGAAAA+TGG | + | chr8.3:65850102-65850121 | MS.gene59582:CDS | 35.0% | |
| TCAATCCTATGCATTTCTTG+TGG | - | chr8.3:65848506-65848525 | None:intergenic | 35.0% | |
| TCAGAACCTTTGAACAAGTT+TGG | + | chr8.3:65848364-65848383 | MS.gene59582:CDS | 35.0% | |
| TCCTGGATTTCTGAATACAT+TGG | - | chr8.3:65848175-65848194 | None:intergenic | 35.0% | |
| TGAATGTAACATTGTGAGTG+TGG | - | chr8.3:65847639-65847658 | None:intergenic | 35.0% | |
| TGATGAATGTTGCACATGTT+TGG | + | chr8.3:65850222-65850241 | MS.gene59582:CDS | 35.0% | |
| TGGAAAGATTGAATGGTTAC+TGG | + | chr8.3:65849306-65849325 | MS.gene59582:intron | 35.0% | |
| TGTTCAATATCTGCATGACA+CGG | - | chr8.3:65847810-65847829 | None:intergenic | 35.0% | |
| TTGATCCACAAGAAATGCAT+AGG | + | chr8.3:65848498-65848517 | MS.gene59582:CDS | 35.0% | |
| TTTCTCTTCAGCTAACAACA+TGG | - | chr8.3:65850101-65850120 | None:intergenic | 35.0% | |
| ! | ATCAAACCTCTTTTGCCTTT+AGG | + | chr8.3:65847489-65847508 | MS.gene59582:CDS | 35.0% |
| ! | ATTTCTGAATACATTGGCTG+TGG | - | chr8.3:65848169-65848188 | None:intergenic | 35.0% |
| ! | CAATTGGTATGGATTGATAC+CGG | + | chr8.3:65848527-65848546 | MS.gene59582:CDS | 35.0% |
| ! | CAGGACACTATGTTATCTTT+TGG | + | chr8.3:65850167-65850186 | MS.gene59582:CDS | 35.0% |
| ! | GATTTTTCTCCTATTCTCAC+TGG | + | chr8.3:65847256-65847275 | MS.gene59582:CDS | 35.0% |
| ! | GCTACTTTGTTCTGTTACAA+TGG | + | chr8.3:65849100-65849119 | MS.gene59582:intron | 35.0% |
| ! | GGAAACACTGAAGAAGATTT+TGG | + | chr8.3:65847099-65847118 | MS.gene59582:CDS | 35.0% |
| ! | TTCTTCCCAAACTTGTTCAA+AGG | - | chr8.3:65848373-65848392 | None:intergenic | 35.0% |
| !! | GTTACTTTGCCTTTTATGCT+TGG | + | chr8.3:65849516-65849535 | MS.gene59582:intron | 35.0% |
| !! | GTTATCTTTTGGGAAATCAG+TGG | + | chr8.3:65850178-65850197 | MS.gene59582:CDS | 35.0% |
| !! | GTTCCATCAAGTTGATTCAA+AGG | - | chr8.3:65848768-65848787 | None:intergenic | 35.0% |
| !!! | ATTGGTTTTCCAGTGAGAAT+AGG | - | chr8.3:65847268-65847287 | None:intergenic | 35.0% |
| !!! | TATTTTAGTACCTGCAGGAT+TGG | - | chr8.3:65848859-65848878 | None:intergenic | 35.0% |
| !!! | TTGTTTTTGTCTAGGGTGTA+AGG | + | chr8.3:65849166-65849185 | MS.gene59582:intron | 35.0% |
| AACTGATCCTGAAAGCTTCA+AGG | + | chr8.3:65847171-65847190 | MS.gene59582:CDS | 40.0% | |
| AATCTGTGTGAAATGAGCCA+AGG | - | chr8.3:65849661-65849680 | None:intergenic | 40.0% | |
| AGCCAAGGGCTCAAATAAAT+TGG | - | chr8.3:65849646-65849665 | None:intergenic | 40.0% | |
| AGGGCTCAAATAAATTGGGA+CGG | - | chr8.3:65849641-65849660 | None:intergenic | 40.0% | |
| ATCTGTGTGAAATGAGCCAA+GGG | - | chr8.3:65849660-65849679 | None:intergenic | 40.0% | |
| ATGTAACATTGTGAGTGTGG+TGG | - | chr8.3:65847636-65847655 | None:intergenic | 40.0% | |
| ATGTTCCTTTCCGAACAAGT+CGG | - | chr8.3:65850315-65850334 | None:intergenic | 40.0% | |
| CAATCACTGCTATCTCCTTA+AGG | + | chr8.3:65847284-65847303 | MS.gene59582:CDS | 40.0% | |
| CTCAAATAAATTGGGACGGA+GGG | - | chr8.3:65849637-65849656 | None:intergenic | 40.0% | |
| CTTAAGGAGATAGCAGTGAT+TGG | - | chr8.3:65847286-65847305 | None:intergenic | 40.0% | |
| GAAAATGGGTCAGATATTCC+GGG | + | chr8.3:65849829-65849848 | MS.gene59582:intron | 40.0% | |
| GCCAAGGGCTCAAATAAATT+GGG | - | chr8.3:65849645-65849664 | None:intergenic | 40.0% | |
| GCCAATGTATTCAGAAATCC+AGG | + | chr8.3:65848171-65848190 | MS.gene59582:CDS | 40.0% | |
| GCTGAATACTTGCAGAGTTT+AGG | + | chr8.3:65847136-65847155 | MS.gene59582:CDS | 40.0% | |
| GGACTGAATATCACATCATG+AGG | - | chr8.3:65848240-65848259 | None:intergenic | 40.0% | |
| GGCTTATACAGATATAGGCT+AGG | + | chr8.3:65849941-65849960 | MS.gene59582:intron | 40.0% | |
| GGTTTGATATATCTGCACTG+TGG | - | chr8.3:65847477-65847496 | None:intergenic | 40.0% | |
| GTAACAGAACAAAGTAGCAG+TGG | - | chr8.3:65849098-65849117 | None:intergenic | 40.0% | |
| GTCATGTCACCAAGCATAAA+AGG | - | chr8.3:65849528-65849547 | None:intergenic | 40.0% | |
| GTGCAGGCTTATACAGATAT+AGG | + | chr8.3:65849936-65849955 | MS.gene59582:intron | 40.0% | |
| GTTTCCTATCCAAAATGGCA+AGG | + | chr8.3:65848080-65848099 | MS.gene59582:CDS | 40.0% | |
| TCCCAATTTATTTGAGCCCT+TGG | + | chr8.3:65849641-65849660 | MS.gene59582:intron | 40.0% | |
| TCTGAGTATGGTTCTTCTGA+AGG | + | chr8.3:65848654-65848673 | MS.gene59582:CDS | 40.0% | |
| TGGATCAAGTTAGCTAGTTC+AGG | - | chr8.3:65848486-65848505 | None:intergenic | 40.0% | |
| TGGCAAACATTGACACATGT+CGG | - | chr8.3:65847616-65847635 | None:intergenic | 40.0% | |
| TTAGCATTAGGGAAAAGCTC+CGG | - | chr8.3:65848549-65848568 | None:intergenic | 40.0% | |
| TTCATTGCATGCTTGTATCC+TGG | - | chr8.3:65848192-65848211 | None:intergenic | 40.0% | |
| TTGTTGACGTGTCAGTGTTT+GGG | - | chr8.3:65847739-65847758 | None:intergenic | 40.0% | |
| TTTAGCTGCCTATGAAGCAT+TGG | + | chr8.3:65847713-65847732 | MS.gene59582:intron | 40.0% | |
| ! | AACATAGTGTCCTGGTTCTT+TGG | - | chr8.3:65850161-65850180 | None:intergenic | 40.0% |
| ! | AGTATGGTTCTTCTGAAGGT+TGG | + | chr8.3:65848658-65848677 | MS.gene59582:CDS | 40.0% |
| ! | CTTGGTGACATGACCTTTAT+GGG | + | chr8.3:65849534-65849553 | MS.gene59582:intron | 40.0% |
| ! | GACAAGTCTTTTGTTGATGC+TGG | + | chr8.3:65850244-65850263 | MS.gene59582:CDS | 40.0% |
| ! | GACATAGCAGTTCTAATGGA+TGG | - | chr8.3:65848444-65848463 | None:intergenic | 40.0% |
| ! | TTGCAGAGTTTAGGACTCAA+TGG | + | chr8.3:65847145-65847164 | MS.gene59582:CDS | 40.0% |
| !! | ATGAAAGCACTTCAATCTCC+TGG | + | chr8.3:65848207-65848226 | MS.gene59582:CDS | 40.0% |
| !! | TATGTTCTAGGGATCATGAC+AGG | + | chr8.3:65848570-65848589 | MS.gene59582:CDS | 40.0% |
| !! | TGCAACACTTTGGTGTTTGT+AGG | - | chr8.3:65850412-65850431 | None:intergenic | 40.0% |
| !! | TGTAGTTCTGGTACTAGTCA+AGG | + | chr8.3:65847410-65847429 | MS.gene59582:intron | 40.0% |
| AAAGCAGTCCACATAAGAGG+TGG | - | chr8.3:65848287-65848306 | None:intergenic | 45.0% | |
| AACAAAGTAGCAGTGGTTGG+TGG | - | chr8.3:65849091-65849110 | None:intergenic | 45.0% | |
| ACACATGCCTTGAAGCTTTC+AGG | - | chr8.3:65847181-65847200 | None:intergenic | 45.0% | |
| AGAGGCTAACAAAGGATGCT+GGG | + | chr8.3:65847065-65847084 | MS.gene59582:CDS | 45.0% | |
| AGGGATCATGACAGGTTCAA+TGG | + | chr8.3:65848578-65848597 | MS.gene59582:CDS | 45.0% | |
| CAGAACAAAGTAGCAGTGGT+TGG | - | chr8.3:65849094-65849113 | None:intergenic | 45.0% | |
| CCATACTCAGAAGTCACCAA+AGG | - | chr8.3:65848645-65848664 | None:intergenic | 45.0% | |
| CCTGTTCCTAAAGGCAAAAG+AGG | - | chr8.3:65847498-65847517 | None:intergenic | 45.0% | |
| CTTCAAGGCATGTGTTCCAT+TGG | + | chr8.3:65847186-65847205 | MS.gene59582:CDS | 45.0% | |
| GAACACACATGTTAGACACC+TGG | + | chr8.3:65847825-65847844 | MS.gene59582:intron | 45.0% | |
| GAGTGAGTGGACAATTATGG+AGG | + | chr8.3:65849360-65849379 | MS.gene59582:intron | 45.0% | |
| GCTCAAATAAATTGGGACGG+AGG | - | chr8.3:65849638-65849657 | None:intergenic | 45.0% | |
| GCTGCTGTAGATGAAGCTTA+AGG | - | chr8.3:65848106-65848125 | None:intergenic | 45.0% | |
| GGATGCTGGGAATGTTCAAA+AGG | + | chr8.3:65847078-65847097 | MS.gene59582:CDS | 45.0% | |
| GGGTTAACTGGTGTGAAGAT+TGG | + | chr8.3:65848810-65848829 | MS.gene59582:CDS | 45.0% | |
| GTTGTTGACGTGTCAGTGTT+TGG | - | chr8.3:65847740-65847759 | None:intergenic | 45.0% | |
| TGAGTCAGTTCAAGACACCT+AGG | + | chr8.3:65850377-65850396 | MS.gene59582:CDS | 45.0% | |
| TGCAAAGCAGTCCACATAAG+AGG | - | chr8.3:65848290-65848309 | None:intergenic | 45.0% | |
| TGTTCGACATCGACATGCTT+TGG | - | chr8.3:65847969-65847988 | None:intergenic | 45.0% | |
| TGTTTGGGCCAATGCTTCAT+AGG | - | chr8.3:65847724-65847743 | None:intergenic | 45.0% | |
| TTTGTAGGAGCAACACACCT+AGG | - | chr8.3:65850397-65850416 | None:intergenic | 45.0% | |
| ! | CCTTTGGTGACTTCTGAGTA+TGG | + | chr8.3:65848642-65848661 | MS.gene59582:CDS | 45.0% |
| ! | GCTTGGTGACATGACCTTTA+TGG | + | chr8.3:65849533-65849552 | MS.gene59582:intron | 45.0% |
| !! | AGCTTAAGGCCTTGCCATTT+TGG | - | chr8.3:65848092-65848111 | None:intergenic | 45.0% |
| !! | CCTCTTTTGCCTTTAGGAAC+AGG | + | chr8.3:65847495-65847514 | MS.gene59582:CDS | 45.0% |
| !! | GTTGTTTTCACCAATCCTGC+AGG | + | chr8.3:65848846-65848865 | MS.gene59582:CDS | 45.0% |
| !!! | AAGGCCTTGCCATTTTGGAT+AGG | - | chr8.3:65848087-65848106 | None:intergenic | 45.0% |
| !!! | TTTTTTTACTCCCTCCGTCC+CGG | - | chr8.3:65849850-65849869 | None:intergenic | 45.0% |
| AAGGTAGAGCTTGAGCCAGT+GGG | + | chr8.3:65848789-65848808 | MS.gene59582:CDS | 50.0% | |
| AGAGGTGGCAGTAGAGTGAT+TGG | - | chr8.3:65848272-65848291 | None:intergenic | 50.0% | |
| AGGGGATGTGGTAAGGGTTA+TGG | + | chr8.3:65849961-65849980 | MS.gene59582:CDS | 50.0% | |
| ATAGGCTAGGGGATGTGGTA+AGG | + | chr8.3:65849954-65849973 | MS.gene59582:CDS | 50.0% | |
| ATGGGTCAGATATTCCGGGA+CGG | + | chr8.3:65849833-65849852 | MS.gene59582:intron | 50.0% | |
| ATTGGGACGGAGGGAGTAAA+AGG | - | chr8.3:65849628-65849647 | None:intergenic | 50.0% | |
| CAGATATAGGCTAGGGGATG+TGG | + | chr8.3:65849949-65849968 | MS.gene59582:CDS | 50.0% | |
| CCGAACAAGTCGGAGTTCAA+GGG | - | chr8.3:65850305-65850324 | None:intergenic | 50.0% | |
| CGAATGTTACCACATGTGCC+AGG | - | chr8.3:65847846-65847865 | None:intergenic | 50.0% | |
| CTATGCAGGAGAGGTTCCTT+TGG | + | chr8.3:65848626-65848645 | MS.gene59582:CDS | 50.0% | |
| CTCTACTGCCACCTCTTATG+TGG | + | chr8.3:65848276-65848295 | MS.gene59582:CDS | 50.0% | |
| GAGAGGCTAACAAAGGATGC+TGG | + | chr8.3:65847064-65847083 | MS.gene59582:CDS | 50.0% | |
| GGGGATGTGGTAAGGGTTAT+GGG | + | chr8.3:65849962-65849981 | MS.gene59582:CDS | 50.0% | |
| GTTGAGACACTATGCAGGAG+AGG | + | chr8.3:65848617-65848636 | MS.gene59582:CDS | 50.0% | |
| TAAGGTAGAGCTTGAGCCAG+TGG | + | chr8.3:65848788-65848807 | MS.gene59582:CDS | 50.0% | |
| TAGGCTAGGGGATGTGGTAA+GGG | + | chr8.3:65849955-65849974 | MS.gene59582:CDS | 50.0% | |
| TCCGAACAAGTCGGAGTTCA+AGG | - | chr8.3:65850306-65850325 | None:intergenic | 50.0% | |
| TGGGATTGGGAGAGAAGAAG+TGG | + | chr8.3:65849494-65849513 | MS.gene59582:intron | 50.0% | |
| TGTTAGACACCTGGCACATG+TGG | + | chr8.3:65847834-65847853 | MS.gene59582:intron | 50.0% | |
| TTCACACCAGTTAACCCCAC+TGG | - | chr8.3:65848807-65848826 | None:intergenic | 50.0% | |
| ! | CCCTTGAACTCCGACTTGTT+CGG | + | chr8.3:65850302-65850321 | MS.gene59582:CDS | 50.0% |
| ! | GAACTCCGACTTGTTCGGAA+AGG | + | chr8.3:65850307-65850326 | MS.gene59582:CDS | 50.0% |
| ! | GCAAACTCAGGAGCCACTTT+AGG | - | chr8.3:65848702-65848721 | None:intergenic | 50.0% |
| ! | GTCTAGGGTGTAAGGTAGAG+TGG | + | chr8.3:65849174-65849193 | MS.gene59582:intron | 50.0% |
| ACATCATGAGGGCTGCATCC+AGG | - | chr8.3:65848228-65848247 | None:intergenic | 55.0% | |
| AGGTAGAGCTTGAGCCAGTG+GGG | + | chr8.3:65848790-65848809 | MS.gene59582:CDS | 55.0% | |
| CACATGTCGGACACCGTCAA+AGG | - | chr8.3:65847603-65847622 | None:intergenic | 55.0% | |
| CTGCATGACACGGACACATG+TGG | - | chr8.3:65847800-65847819 | None:intergenic | 55.0% | |
| CTTGAGCCAGTGGGGTTAAC+TGG | + | chr8.3:65848798-65848817 | MS.gene59582:CDS | 55.0% | |
| GTCAGATATTCCGGGACGGA+GGG | + | chr8.3:65849837-65849856 | MS.gene59582:intron | 55.0% | |
| GGTCAGATATTCCGGGACGG+AGG | + | chr8.3:65849836-65849855 | MS.gene59582:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 65847013 | 65850483 | 65847013 | ID=MS.gene59582 |
| chr8.3 | mRNA | 65847013 | 65850483 | 65847013 | ID=MS.gene59582.t1;Parent=MS.gene59582 |
| chr8.3 | exon | 65847013 | 65847305 | 65847013 | ID=MS.gene59582.t1.exon1;Parent=MS.gene59582.t1 |
| chr8.3 | CDS | 65847013 | 65847305 | 65847013 | ID=cds.MS.gene59582.t1;Parent=MS.gene59582.t1 |
| chr8.3 | exon | 65847415 | 65847516 | 65847415 | ID=MS.gene59582.t1.exon2;Parent=MS.gene59582.t1 |
| chr8.3 | CDS | 65847415 | 65847516 | 65847415 | ID=cds.MS.gene59582.t1;Parent=MS.gene59582.t1 |
| chr8.3 | exon | 65848077 | 65848867 | 65848077 | ID=MS.gene59582.t1.exon3;Parent=MS.gene59582.t1 |
| chr8.3 | CDS | 65848077 | 65848867 | 65848077 | ID=cds.MS.gene59582.t1;Parent=MS.gene59582.t1 |
| chr8.3 | exon | 65849942 | 65850483 | 65849942 | ID=MS.gene59582.t1.exon4;Parent=MS.gene59582.t1 |
| chr8.3 | CDS | 65849942 | 65850483 | 65849942 | ID=cds.MS.gene59582.t1;Parent=MS.gene59582.t1 |
| Gene Sequence |
| Protein sequence |
