Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61999.t1 | RHN44535.1 | 93.7 | 1044 | 66 | 0 | 1 | 1044 | 37 | 1080 | 0.00E+00 | 1798.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61999.t1 | Q8VWF8 | 73.5 | 854 | 216 | 4 | 192 | 1044 | 176 | 1020 | 0.0e+00 | 1291.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61999.t1 | A0A396H096 | 93.7 | 1044 | 66 | 0 | 1 | 1044 | 37 | 1080 | 0.0e+00 | 1798.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049207 | MS.gene61999 | 0.870827 | 1.09E-66 | -1.69E-46 |
| MS.gene049824 | MS.gene61999 | 0.860394 | 2.13E-63 | -1.69E-46 |
| MS.gene049825 | MS.gene61999 | 0.844373 | 7.87E-59 | -1.69E-46 |
| MS.gene049873 | MS.gene61999 | 0.815582 | 8.59E-52 | -1.69E-46 |
| MS.gene04987 | MS.gene61999 | 0.800093 | 1.69E-48 | -1.69E-46 |
| MS.gene050303 | MS.gene61999 | 0.808478 | 3.04E-50 | -1.69E-46 |
| MS.gene050885 | MS.gene61999 | 0.805357 | 1.39E-49 | -1.69E-46 |
| MS.gene052584 | MS.gene61999 | 0.802005 | 6.89E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene61999 | 0.840206 | 9.99E-58 | -1.69E-46 |
| MS.gene053226 | MS.gene61999 | 0.809438 | 1.89E-50 | -1.69E-46 |
| MS.gene053294 | MS.gene61999 | 0.824761 | 6.78E-54 | -1.69E-46 |
| MS.gene053995 | MS.gene61999 | 0.805496 | 1.30E-49 | -1.69E-46 |
| MS.gene055808 | MS.gene61999 | 0.856835 | 2.46E-62 | -1.69E-46 |
| MS.gene056091 | MS.gene61999 | 0.838217 | 3.28E-57 | -1.69E-46 |
| MS.gene056403 | MS.gene61999 | 0.833673 | 4.66E-56 | -1.69E-46 |
| MS.gene056605 | MS.gene61999 | 0.828495 | 8.71E-55 | -1.69E-46 |
| MS.gene05689 | MS.gene61999 | 0.825912 | 3.62E-54 | -1.69E-46 |
| MS.gene057060 | MS.gene61999 | 0.800017 | 1.76E-48 | -1.69E-46 |
| MS.gene057555 | MS.gene61999 | 0.807513 | 4.87E-50 | -1.69E-46 |
| MS.gene05953 | MS.gene61999 | 0.817249 | 3.64E-52 | -1.69E-46 |
| MS.gene05954 | MS.gene61999 | 0.829106 | 6.20E-55 | -1.69E-46 |
| MS.gene059935 | MS.gene61999 | 0.840549 | 8.13E-58 | -1.69E-46 |
| MS.gene060830 | MS.gene61999 | 0.808245 | 3.41E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61999.t1 | MTR_7g017440 | 97.522 | 565 | 14 | 0 | 480 | 1044 | 2 | 566 | 0.0 | 1163 |
| MS.gene61999.t1 | MTR_8g065900 | 73.446 | 708 | 182 | 3 | 339 | 1044 | 24 | 727 | 0.0 | 1089 |
| MS.gene61999.t1 | MTR_8g065960 | 54.545 | 165 | 70 | 2 | 162 | 323 | 97 | 259 | 6.81e-50 | 177 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61999.t1 | AT5G15700 | 70.106 | 853 | 246 | 3 | 192 | 1044 | 168 | 1011 | 0.0 | 1279 |
| MS.gene61999.t1 | AT5G15700 | 69.529 | 850 | 249 | 4 | 192 | 1040 | 168 | 1008 | 0.0 | 1262 |
| MS.gene61999.t1 | AT1G68990 | 65.960 | 896 | 286 | 6 | 162 | 1044 | 87 | 976 | 0.0 | 1253 |
| MS.gene61999.t1 | AT1G68990 | 65.449 | 903 | 286 | 7 | 162 | 1044 | 87 | 983 | 0.0 | 1246 |
| MS.gene61999.t1 | AT2G24120 | 65.258 | 852 | 276 | 6 | 197 | 1044 | 158 | 993 | 0.0 | 1177 |
| MS.gene61999.t1 | AT2G24120 | 62.903 | 744 | 256 | 6 | 197 | 936 | 158 | 885 | 0.0 | 979 |
Find 235 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGGCTCTAATTGCTTTCT+AGG | 0.152818 | 7.2:+80430121 | None:intergenic |
| AGCTCGTCATGCAAAGATTT+TGG | 0.206895 | 7.2:-80425087 | MS.gene61999:CDS |
| TGTGACCCTCTAATTCTTAA+AGG | 0.217002 | 7.2:-80433805 | MS.gene61999:CDS |
| TGTAACTTTGGGAAGGAAAA+TGG | 0.231806 | 7.2:-80435968 | MS.gene61999:CDS |
| TTTCAGTTAGTTGAGAATTT+TGG | 0.235773 | 7.2:-80435920 | MS.gene61999:CDS |
| AAGCCGCTTGGTTGAACTTT+TGG | 0.249283 | 7.2:-80434070 | MS.gene61999:CDS |
| TCAAGAGTCGTTCCCATCTT+TGG | 0.261651 | 7.2:-80422640 | MS.gene61999:CDS |
| TACATGAAGTCATTGTTTCT+TGG | 0.266912 | 7.2:-80435371 | MS.gene61999:CDS |
| TCAAGTGAGTGAACAAAATT+TGG | 0.271509 | 7.2:+80423650 | None:intergenic |
| TTCTCAATTGCATCCCTTAG+AGG | 0.271883 | 7.2:+80435338 | None:intergenic |
| TGTCTAGGTGGATAGAAAAT+TGG | 0.287964 | 7.2:-80424854 | MS.gene61999:intron |
| CAAACCTTTACAGACTTGTT+TGG | 0.290650 | 7.2:+80436066 | None:intergenic |
| TTACAACATTATGCTGCTTT+AGG | 0.291824 | 7.2:-80428467 | MS.gene61999:CDS |
| CACACCTTTGTCTTCATAAC+TGG | 0.294324 | 7.2:+80434182 | None:intergenic |
| TTGGTTGGTTTGAGCCTCTA+AGG | 0.295476 | 7.2:-80435352 | MS.gene61999:CDS |
| GACTTCATGTAAGGCAAATT+AGG | 0.306145 | 7.2:+80435383 | None:intergenic |
| GGTGACCTTAACCGCCTTAC+AGG | 0.310319 | 7.2:-80424609 | MS.gene61999:CDS |
| ATCTTTGCATGACGAGCTTC+AGG | 0.313166 | 7.2:+80425092 | None:intergenic |
| CAGAGAAAAGGAAGTGGAAA+TGG | 0.334572 | 7.2:-80429628 | MS.gene61999:CDS |
| GCTGGTGGAGGTCGACTTGC+TGG | 0.335072 | 7.2:-80429895 | MS.gene61999:CDS |
| GGACGTCCTCTTGGAAAATC+TGG | 0.335188 | 7.2:-80429310 | MS.gene61999:CDS |
| GTTCCACCGGTCAACTGGTC+AGG | 0.336231 | 7.2:-80431634 | MS.gene61999:CDS |
| GGTTAGAATACACAAGTTCT+TGG | 0.342488 | 7.2:-80434381 | MS.gene61999:CDS |
| ATACTCTCGGGAATACAAAA+TGG | 0.346287 | 7.2:-80429960 | MS.gene61999:CDS |
| AGAAGAGAAACTGCGTAAAA+AGG | 0.348070 | 7.2:-80434285 | MS.gene61999:CDS |
| CATCTCCTGTAAGGCGGTTA+AGG | 0.349958 | 7.2:+80424604 | None:intergenic |
| CAGTATCAGTTGAAGAAATA+TGG | 0.353263 | 7.2:+80422561 | None:intergenic |
| TAAAGAGTTGTTGGAGGAGA+TGG | 0.356164 | 7.2:-80435699 | MS.gene61999:CDS |
| GCAATTAGAGCCTGTATTTG+AGG | 0.363031 | 7.2:-80430113 | MS.gene61999:intron |
| TGGAGGTCGACTTGCTGGTT+TGG | 0.363702 | 7.2:-80429890 | MS.gene61999:CDS |
| ATACACTTGGCAAATCTATA+TGG | 0.364455 | 7.2:-80429271 | MS.gene61999:CDS |
| GAGAGGAATTATCACAATTC+GGG | 0.368172 | 7.2:-80435818 | MS.gene61999:CDS |
| GCAGATGATTCAGAGCTCTT+TGG | 0.372941 | 7.2:-80424739 | MS.gene61999:CDS |
| TGAGAGGAATTATCACAATT+CGG | 0.377036 | 7.2:-80435819 | MS.gene61999:CDS |
| TAGGGGTCCATGATTCATAT+TGG | 0.379140 | 7.2:-80423326 | MS.gene61999:CDS |
| TCAGTGTTGTGGATAGGATA+TGG | 0.385606 | 7.2:-80429918 | MS.gene61999:CDS |
| AGATGTATGCCGAGGGATAT+TGG | 0.386176 | 7.2:-80429344 | MS.gene61999:CDS |
| GTGACCCTCTAATTCTTAAA+GGG | 0.389444 | 7.2:-80433804 | MS.gene61999:CDS |
| CGAAATTAACGAGTTGTTGA+AGG | 0.392287 | 7.2:-80435579 | MS.gene61999:CDS |
| GGAACAACCATAGGCATATA+AGG | 0.393554 | 7.2:+80431652 | None:intergenic |
| TCGTTAATTTCGTCATCAAC+CGG | 0.395786 | 7.2:+80435590 | None:intergenic |
| ATCTGTGAAGAAAGAGAATA+GGG | 0.398187 | 7.2:-80429597 | MS.gene61999:CDS |
| GCTGCTGTCAATCTAGTTGC+AGG | 0.402450 | 7.2:-80427158 | MS.gene61999:CDS |
| ATTGTTATAAATTACCTTGT+CGG | 0.405440 | 7.2:+80424140 | None:intergenic |
| AACTTTGGCAAGAAGCTGCC+AGG | 0.406398 | 7.2:-80435451 | MS.gene61999:CDS |
| GAGCAAGAGATGTATCGAAA+TGG | 0.408230 | 7.2:-80435314 | MS.gene61999:CDS |
| CGTGAAAATACCTGATGTAC+TGG | 0.410317 | 7.2:+80429043 | None:intergenic |
| TCAAGCCCTTTAAGAATTAG+AGG | 0.415223 | 7.2:+80433799 | None:intergenic |
| AATCTGTGAAGAAAGAGAAT+AGG | 0.415826 | 7.2:-80429598 | MS.gene61999:CDS |
| CATCCACACTTAAATCATCT+TGG | 0.420358 | 7.2:-80429370 | MS.gene61999:CDS |
| TCATGCATGCAGCTAAGAAC+TGG | 0.425311 | 7.2:+80429119 | None:intergenic |
| AGTAATTACAGCCATCTTAT+CGG | 0.433035 | 7.2:+80435247 | None:intergenic |
| TGAAGTCATTGTTTCTTGGT+TGG | 0.435566 | 7.2:-80435367 | MS.gene61999:CDS |
| TGATGAAATTAAAGAGTTGT+TGG | 0.436703 | 7.2:-80435708 | MS.gene61999:CDS |
| TGGTTGTTCCACCGGTCAAC+TGG | 0.437546 | 7.2:-80431639 | MS.gene61999:CDS |
| TTTGGCAGAGGGGAAATATA+AGG | 0.437602 | 7.2:-80435507 | MS.gene61999:CDS |
| TCTTATCTAAACAGGAAAAC+AGG | 0.437890 | 7.2:-80433850 | MS.gene61999:intron |
| TTTGCAGATGGACGTCCTCT+TGG | 0.440912 | 7.2:-80429319 | MS.gene61999:CDS |
| ACAAATGCAGGACGGATATC+AGG | 0.445370 | 7.2:+80433985 | None:intergenic |
| TTGATGGCGGGAAGTGAGAA+AGG | 0.445487 | 7.2:-80435203 | MS.gene61999:CDS |
| GAAGAGAGGAAGCAGAATGC+TGG | 0.445926 | 7.2:-80435545 | MS.gene61999:CDS |
| CAGGCTCTAATTGCTTTCTA+GGG | 0.447162 | 7.2:+80430122 | None:intergenic |
| GGTCATTCCTTATATGCCTA+TGG | 0.447250 | 7.2:-80431659 | MS.gene61999:CDS |
| TGGGTTCAAGTGGCATGGTT+TGG | 0.449115 | 7.2:-80435525 | MS.gene61999:CDS |
| GACTGCGATTGCCTGCAAAA+AGG | 0.449861 | 7.2:-80423609 | MS.gene61999:CDS |
| CTGTCTCACCTCTTGCTCAA+TGG | 0.450545 | 7.2:+80435130 | None:intergenic |
| TCGTCAGTTTCTAGCTCCTC+AGG | 0.450905 | 7.2:+80429656 | None:intergenic |
| TGATTCTGCTGAACAACCTA+TGG | 0.453658 | 7.2:-80429179 | MS.gene61999:CDS |
| AGATGGAGAGAGAAGATAAG+AGG | 0.456540 | 7.2:-80435682 | MS.gene61999:CDS |
| ACGTGGAGACTTGGATTTGA+AGG | 0.456846 | 7.2:-80422598 | MS.gene61999:CDS |
| TAAGATGATGGCGTTGTTGA+TGG | 0.458511 | 7.2:-80435219 | MS.gene61999:CDS |
| AGCAAGAGATGTATCGAAAT+GGG | 0.460164 | 7.2:-80435313 | MS.gene61999:CDS |
| CAAAAGCTCTTTATATTCCC+TGG | 0.460496 | 7.2:+80435433 | None:intergenic |
| AAATCCAAGTCTCCACGTTC+AGG | 0.463506 | 7.2:+80422603 | None:intergenic |
| CAAGTCTCCACGTTCAGGTA+AGG | 0.464682 | 7.2:+80422608 | None:intergenic |
| CAATATGCCTTCCTTGATAA+CGG | 0.465855 | 7.2:+80424311 | None:intergenic |
| TGATCTGATTCTGATTCTGC+TGG | 0.466017 | 7.2:+80434024 | None:intergenic |
| ATCACATATTCCAGTACATC+AGG | 0.466402 | 7.2:-80429053 | MS.gene61999:intron |
| CTTACCTGAACGTGGAGACT+TGG | 0.468890 | 7.2:-80422607 | MS.gene61999:CDS |
| TCAGTTGCCATCCGATAAGA+TGG | 0.470842 | 7.2:-80435258 | MS.gene61999:CDS |
| CCCCTAAAATCAAGGTTATG+TGG | 0.472003 | 7.2:+80429409 | None:intergenic |
| TCCTATGTCATGCGTACTCA+TGG | 0.476825 | 7.2:-80430178 | MS.gene61999:CDS |
| TAAATTCAGACCTCAAATAC+AGG | 0.477743 | 7.2:+80430103 | None:intergenic |
| CTGACGATGAAGCAGAGAAA+AGG | 0.485306 | 7.2:-80429640 | MS.gene61999:CDS |
| CGTGCGTCCAATATGAATCA+TGG | 0.486009 | 7.2:+80423319 | None:intergenic |
| TGGTTGGTTTGAGCCTCTAA+GGG | 0.486956 | 7.2:-80435351 | MS.gene61999:CDS |
| TTGGAAAATCTGGTTTGCAC+TGG | 0.487172 | 7.2:-80429300 | MS.gene61999:CDS |
| GTGTGTTGGACCACTCCTCT+TGG | 0.488274 | 7.2:-80424355 | MS.gene61999:CDS |
| GCCTTACAGGAGATGTTTGA+AGG | 0.489071 | 7.2:-80424596 | MS.gene61999:CDS |
| TGAGTCCACTGAAGTCATAA+AGG | 0.489428 | 7.2:-80434309 | MS.gene61999:CDS |
| TTGTTCGCAATTTGATGCAA+AGG | 0.489673 | 7.2:-80435888 | MS.gene61999:CDS |
| TGCTGCTTGTTATGCTGCAA+AGG | 0.490652 | 7.2:-80424716 | MS.gene61999:intron |
| AGAAACAATGACTTCATGTA+AGG | 0.491431 | 7.2:+80435374 | None:intergenic |
| GTTTCCAAACAAGTCTGTAA+AGG | 0.491895 | 7.2:-80436070 | MS.gene61999:CDS |
| AGGAAAACAGGCAGAAAATA+CGG | 0.499883 | 7.2:-80433838 | MS.gene61999:CDS |
| CAAGTGGCATGGTTTGGCAG+AGG | 0.500667 | 7.2:-80435519 | MS.gene61999:CDS |
| TGTTTCTTCTACTGATGTTG+AGG | 0.501090 | 7.2:-80435843 | MS.gene61999:CDS |
| TATGCCTATGGTTGTTCCAC+CGG | 0.502178 | 7.2:-80431647 | MS.gene61999:CDS |
| CTAAATGAATGCACAAATGC+AGG | 0.505958 | 7.2:+80433973 | None:intergenic |
| TGAAATTAAAGAGTTGTTGG+AGG | 0.506233 | 7.2:-80435705 | MS.gene61999:CDS |
| AAGGGTGGAAATTCCAAAGA+TGG | 0.506458 | 7.2:+80422627 | None:intergenic |
| TGGCACTGCTAGGGTTGTAC+AGG | 0.507605 | 7.2:-80435174 | MS.gene61999:CDS |
| TTCATTTAGAACGATGAAAG+AGG | 0.509193 | 7.2:-80433959 | MS.gene61999:CDS |
| CGTTAATTTCGTCATCAACC+GGG | 0.510497 | 7.2:+80435591 | None:intergenic |
| GATGGCAACTGAAGAAAGTA+AGG | 0.511997 | 7.2:+80435269 | None:intergenic |
| CAGTGTTGTGGATAGGATAT+GGG | 0.513617 | 7.2:-80429917 | MS.gene61999:CDS |
| TTCTTCCTTTATGACTTCAG+TGG | 0.514403 | 7.2:+80434304 | None:intergenic |
| GTGCACGAAGTATCATGAAC+TGG | 0.515680 | 7.2:-80424574 | MS.gene61999:CDS |
| ACCTTCAAACATCTCCTGTA+AGG | 0.517660 | 7.2:+80424595 | None:intergenic |
| TAACGGTATGGTTGCACCAC+AGG | 0.521786 | 7.2:+80424328 | None:intergenic |
| TCATAGGATGGCTCTTGCAA+CGG | 0.521920 | 7.2:-80428491 | MS.gene61999:intron |
| GATTAGGCTCTGGATACTCT+CGG | 0.523001 | 7.2:-80429973 | MS.gene61999:intron |
| AAGGATTCGTTGGCACTGCT+AGG | 0.525342 | 7.2:-80435184 | MS.gene61999:CDS |
| AATTACTATGCATAAGATGA+TGG | 0.525392 | 7.2:-80435231 | MS.gene61999:CDS |
| CAGAAGCTTGCTGCAGTGAG+AGG | 0.526059 | 7.2:-80434242 | MS.gene61999:CDS |
| TGTTCGCAATTTGATGCAAA+GGG | 0.526461 | 7.2:-80435887 | MS.gene61999:CDS |
| ACGGTGATGACATCAGTTTA+CGG | 0.527119 | 7.2:-80424823 | MS.gene61999:CDS |
| TGCCTTCCTTGATAACGGTA+TGG | 0.528378 | 7.2:+80424316 | None:intergenic |
| TTTGAGAGAAAACAAGAGGT+GGG | 0.534789 | 7.2:+80436023 | None:intergenic |
| AGGATTCGTTGGCACTGCTA+GGG | 0.536168 | 7.2:-80435183 | MS.gene61999:CDS |
| TCTGTAAAGGTTTGTTACGT+CGG | 0.536865 | 7.2:-80436057 | MS.gene61999:CDS |
| AGGTCGACTTGCTGGTTTGG+TGG | 0.536882 | 7.2:-80429887 | MS.gene61999:CDS |
| GTTGATAAACTATCAAATGA+AGG | 0.537392 | 7.2:-80429241 | MS.gene61999:CDS |
| AACAAAATTTGGCGGAAATG+CGG | 0.541188 | 7.2:+80423661 | None:intergenic |
| GTCTTCATAACTGGTCCCCA+CGG | 0.542194 | 7.2:+80434191 | None:intergenic |
| AATCGATGCTCAGAAAGATC+CGG | 0.543189 | 7.2:-80425123 | MS.gene61999:CDS |
| AAGAGAGGAAGCAGAATGCT+GGG | 0.544143 | 7.2:-80435544 | MS.gene61999:CDS |
| TCATACCCTGACCAGTTGAC+CGG | 0.545482 | 7.2:+80431628 | None:intergenic |
| GGAAGTGAGAAAGGATTCGT+TGG | 0.546351 | 7.2:-80435194 | MS.gene61999:CDS |
| AAGTCTCCACGTTCAGGTAA+GGG | 0.546539 | 7.2:+80422609 | None:intergenic |
| TGCAGTGAGAGGAATATTGA+AGG | 0.546670 | 7.2:-80434231 | MS.gene61999:CDS |
| GATAGGATATGGGCTGGTGG+AGG | 0.547233 | 7.2:-80429907 | MS.gene61999:CDS |
| GAAGCCAGCTGATGTTTACT+CGG | 0.548235 | 7.2:-80427132 | MS.gene61999:CDS |
| GTGCAACCATACCGTTATCA+AGG | 0.548809 | 7.2:-80424322 | MS.gene61999:CDS |
| CATGCAGCTAAGAACTGGAA+TGG | 0.552093 | 7.2:+80429124 | None:intergenic |
| TGAAGATTGAGACTGAACTT+TGG | 0.553495 | 7.2:-80435466 | MS.gene61999:CDS |
| TAACAAGGTGCTCAGTGTTG+TGG | 0.553805 | 7.2:-80429929 | MS.gene61999:CDS |
| AAGTGGCATGGTTTGGCAGA+GGG | 0.555346 | 7.2:-80435518 | MS.gene61999:CDS |
| CACTCCTCTTGGACTTCCTG+TGG | 0.555604 | 7.2:-80424344 | MS.gene61999:CDS |
| TAGAAAATTGGTTAAGCAGA+CGG | 0.556508 | 7.2:-80424842 | MS.gene61999:CDS |
| AGGGGAAATATAAGGAGTTG+AGG | 0.558326 | 7.2:-80435499 | MS.gene61999:CDS |
| ATGATTTAAGTGTGGATGCA+TGG | 0.559183 | 7.2:+80429375 | None:intergenic |
| ATACCCGAGTAAACATCAGC+TGG | 0.559744 | 7.2:+80427128 | None:intergenic |
| CTACTGATGTTGAGGATGAG+AGG | 0.562882 | 7.2:-80435835 | MS.gene61999:CDS |
| ATGCACGGCCCCTAAAATCA+AGG | 0.564863 | 7.2:+80429401 | None:intergenic |
| ATGAGTACGCATGACATAGG+AGG | 0.565026 | 7.2:+80430180 | None:intergenic |
| TTCCACCGGTCAACTGGTCA+GGG | 0.565246 | 7.2:-80431633 | MS.gene61999:intron |
| AGGAGATGAAGAAAGAAGAG+AGG | 0.566892 | 7.2:-80435559 | MS.gene61999:CDS |
| TTTGGGAAGGAAAATGGAAG+TGG | 0.569126 | 7.2:-80435962 | MS.gene61999:CDS |
| AGCAGAATGCTGGGTTCAAG+TGG | 0.569157 | 7.2:-80435535 | MS.gene61999:CDS |
| ATGAAGCAGAGAAAAGGAAG+TGG | 0.569290 | 7.2:-80429634 | MS.gene61999:CDS |
| AGTGAGTGAACAAAATTTGG+CGG | 0.569833 | 7.2:+80423653 | None:intergenic |
| GCAGGTAGCACGTAAAATGA+AGG | 0.570674 | 7.2:-80429452 | MS.gene61999:intron |
| GTGGATAGGATATGGGCTGG+TGG | 0.571994 | 7.2:-80429910 | MS.gene61999:CDS |
| TGTATCGAAATGGGAAGAAG+AGG | 0.574216 | 7.2:-80435304 | MS.gene61999:CDS |
| ATTAGGCTCTGGATACTCTC+GGG | 0.574245 | 7.2:-80429972 | MS.gene61999:intron |
| CTGAAAATGAACCAGTGTGT+TGG | 0.574335 | 7.2:-80424369 | MS.gene61999:CDS |
| AGGTGCTCAGTGTTGTGGAT+AGG | 0.577161 | 7.2:-80429924 | MS.gene61999:CDS |
| GTACAGGCCGTGTGCAGTGT+AGG | 0.578661 | 7.2:-80435158 | MS.gene61999:CDS |
| CGAAGTATCATGAACTGGCT+TGG | 0.578975 | 7.2:-80424569 | MS.gene61999:CDS |
| CCTTGATGATACAAAACCGT+GGG | 0.579566 | 7.2:-80434207 | MS.gene61999:CDS |
| CCCTAAAATCAAGGTTATGT+GGG | 0.579880 | 7.2:+80429410 | None:intergenic |
| AGGTGATTCCATTGAGCAAG+AGG | 0.585709 | 7.2:-80435138 | MS.gene61999:intron |
| GGGATATTGGAATTTGCAGA+TGG | 0.587303 | 7.2:-80429331 | MS.gene61999:CDS |
| AATGCTGGGTTCAAGTGGCA+TGG | 0.588175 | 7.2:-80435530 | MS.gene61999:CDS |
| CTGCAAATTCCAATATCCCT+CGG | 0.588690 | 7.2:+80429335 | None:intergenic |
| GTTGTGGATAGGATATGGGC+TGG | 0.590230 | 7.2:-80429913 | MS.gene61999:CDS |
| GGGTTATTCTAGTGTTGCTG+AGG | 0.590458 | 7.2:-80435867 | MS.gene61999:CDS |
| TGATTTAAGTGTGGATGCAT+GGG | 0.591026 | 7.2:+80429376 | None:intergenic |
| TGCACAGGTAGGAAGCCGCT+TGG | 0.591173 | 7.2:-80434082 | MS.gene61999:intron |
| TGTCACATACATTGGAGCAC+GGG | 0.596055 | 7.2:-80424800 | MS.gene61999:CDS |
| AACCATACCGTTATCAAGGA+AGG | 0.596673 | 7.2:-80424318 | MS.gene61999:CDS |
| CACCACCGTCTTCCTTCCAT+AGG | 0.597295 | 7.2:+80429163 | None:intergenic |
| TTGACCGGTGGAACAACCAT+AGG | 0.597340 | 7.2:+80431643 | None:intergenic |
| GGATATGTGTGAACAGAAGT+TGG | 0.597879 | 7.2:-80435408 | MS.gene61999:CDS |
| GAATCAGATCAGTCACAAGA+TGG | 0.598338 | 7.2:-80434012 | MS.gene61999:CDS |
| TCTGATTCTGATTCTGCTGG+CGG | 0.600012 | 7.2:+80434027 | None:intergenic |
| GTTTACGGTGTCACATACAT+TGG | 0.601503 | 7.2:-80424808 | MS.gene61999:CDS |
| ACTTTGGCAAGAAGCTGCCA+GGG | 0.602239 | 7.2:-80435450 | MS.gene61999:CDS |
| AGGCTCTAATTGCTTTCTAG+GGG | 0.603058 | 7.2:+80430123 | None:intergenic |
| TCTCGGGAATACAAAATGGA+AGG | 0.603948 | 7.2:-80429956 | MS.gene61999:CDS |
| ATATGTGATATAAATGACTC+TGG | 0.605499 | 7.2:+80429067 | None:intergenic |
| AGAGGAGTGGTCCAACACAC+TGG | 0.609454 | 7.2:+80424358 | None:intergenic |
| AGGGTGGAAATTCCAAAGAT+GGG | 0.609540 | 7.2:+80422628 | None:intergenic |
| TACCCTGACCAGTTGACCGG+TGG | 0.611302 | 7.2:+80431631 | None:intergenic |
| CTATGGAAGGAAGACGGTGG+TGG | 0.612945 | 7.2:-80429162 | MS.gene61999:CDS |
| ATGATGGCGTTGTTGATGGC+GGG | 0.613550 | 7.2:-80435215 | MS.gene61999:CDS |
| AGTGGCATGGTTTGGCAGAG+GGG | 0.613800 | 7.2:-80435517 | MS.gene61999:CDS |
| GCATTTCATCAAACATGTGG+CGG | 0.613861 | 7.2:-80436096 | None:intergenic |
| CAAGCCCTTTAAGAATTAGA+GGG | 0.614217 | 7.2:+80433800 | None:intergenic |
| GGAATCACCTACACTGCACA+CGG | 0.614870 | 7.2:+80435151 | None:intergenic |
| TTTGTAGGTTGAAATTCCTG+AGG | 0.617422 | 7.2:-80429672 | MS.gene61999:intron |
| ATTACAGCCATCTTATCGGA+TGG | 0.617600 | 7.2:+80435251 | None:intergenic |
| AAGCCAGCTGATGTTTACTC+GGG | 0.619354 | 7.2:-80427131 | MS.gene61999:CDS |
| TTTACTCGGGTATAGCAGCT+AGG | 0.619553 | 7.2:-80427118 | MS.gene61999:intron |
| GTTAATTTCGTCATCAACCG+GGG | 0.622932 | 7.2:+80435592 | None:intergenic |
| GTGTCACATACATTGGAGCA+CGG | 0.625881 | 7.2:-80424801 | MS.gene61999:CDS |
| TCAGATCAGTCACAAGATGG+TGG | 0.627524 | 7.2:-80434009 | MS.gene61999:CDS |
| TCTGCTGAACAACCTATGGA+AGG | 0.632279 | 7.2:-80429175 | MS.gene61999:CDS |
| TGGAGTCAAGCAACAACGAG+AGG | 0.632411 | 7.2:-80430158 | MS.gene61999:CDS |
| TCTCCACGTTCAGGTAAGGG+TGG | 0.633894 | 7.2:+80422612 | None:intergenic |
| TATTGCAGGTCATGGTCAAG+CGG | 0.635992 | 7.2:-80423691 | MS.gene61999:intron |
| CACAGGAAGTCCAAGAGGAG+TGG | 0.639013 | 7.2:+80424345 | None:intergenic |
| CTTGGTTCAGATGTATGCCG+AGG | 0.639237 | 7.2:-80429352 | MS.gene61999:CDS |
| GCAGTGAGAGGAATATTGAA+GGG | 0.639669 | 7.2:-80434230 | MS.gene61999:CDS |
| GATGATGGCGTTGTTGATGG+CGG | 0.640272 | 7.2:-80435216 | MS.gene61999:CDS |
| TTGGTTCAGATGTATGCCGA+GGG | 0.640529 | 7.2:-80429351 | MS.gene61999:CDS |
| TCCATGAGTACGCATGACAT+AGG | 0.641022 | 7.2:+80430177 | None:intergenic |
| GAAAAGGAAGTGGAAATGGA+AGG | 0.642159 | 7.2:-80429624 | MS.gene61999:CDS |
| TTGGGAAGGAAAATGGAAGT+GGG | 0.645962 | 7.2:-80435961 | MS.gene61999:CDS |
| GCTTACTTCGACTGATGCAG+AGG | 0.646586 | 7.2:-80435753 | MS.gene61999:CDS |
| CACGGGAACAGATAAAGAGA+AGG | 0.648861 | 7.2:-80424783 | MS.gene61999:CDS |
| TGAGTACGCATGACATAGGA+GGG | 0.649322 | 7.2:+80430181 | None:intergenic |
| TGCTGCTTTAGGAAGAGACA+AGG | 0.653323 | 7.2:-80428456 | MS.gene61999:intron |
| AACAACCTATGGAAGGAAGA+CGG | 0.654773 | 7.2:-80429168 | MS.gene61999:CDS |
| GCACTGGCTGAAGATACACT+TGG | 0.654832 | 7.2:-80429284 | MS.gene61999:CDS |
| ATGAATGCACAAATGCAGGA+CGG | 0.661737 | 7.2:+80433977 | None:intergenic |
| TTGGCAAATCTATATGGTGG+TGG | 0.662171 | 7.2:-80429265 | MS.gene61999:CDS |
| CACTTGGCAAATCTATATGG+TGG | 0.663601 | 7.2:-80429268 | MS.gene61999:CDS |
| TTCAAACATCTCCTGTAAGG+CGG | 0.669556 | 7.2:+80424598 | None:intergenic |
| GAACCAAAAGTTCAACCAAG+CGG | 0.670487 | 7.2:+80434067 | None:intergenic |
| TTTCCACCCTTACCTGAACG+TGG | 0.672956 | 7.2:-80422615 | MS.gene61999:CDS |
| GCCTTGATGATACAAAACCG+TGG | 0.673052 | 7.2:-80434208 | MS.gene61999:CDS |
| TGCACCACAGGAAGTCCAAG+AGG | 0.678719 | 7.2:+80424340 | None:intergenic |
| GAACCAAGATGATTTAAGTG+TGG | 0.679329 | 7.2:+80429367 | None:intergenic |
| AAAATGGAAGGTAAATAACA+AGG | 0.684330 | 7.2:-80429944 | MS.gene61999:CDS |
| TAGTTGAGCTTACATCATTG+CGG | 0.684560 | 7.2:+80429863 | None:intergenic |
| GGGGAATTTGCATAACGATG+CGG | 0.695175 | 7.2:-80435630 | MS.gene61999:CDS |
| GTGGATGCATGGGATATGCA+CGG | 0.698824 | 7.2:+80429386 | None:intergenic |
| GGGACCAGTTATGAAGACAA+AGG | 0.702961 | 7.2:-80434186 | MS.gene61999:intron |
| AATTTCGTCATCAACCGGGG+CGG | 0.715363 | 7.2:+80435595 | None:intergenic |
| CTTGATGATACAAAACCGTG+GGG | 0.720789 | 7.2:-80434206 | MS.gene61999:CDS |
| GTGGGCGTGTGAATAAATCG+AGG | 0.739083 | 7.2:-80435943 | MS.gene61999:CDS |
| ATTGAAACGAGAAACCGACA+AGG | 0.751717 | 7.2:-80424154 | MS.gene61999:intron |
| AACCTATGGAAGGAAGACGG+TGG | 0.771471 | 7.2:-80429165 | MS.gene61999:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 80422566 | 80436104 | 80422566 | ID=MS.gene61999 |
| chr7.2 | mRNA | 80422566 | 80436104 | 80422566 | ID=MS.gene61999.t1;Parent=MS.gene61999 |
| chr7.2 | exon | 80435139 | 80436104 | 80435139 | ID=MS.gene61999.t1.exon1;Parent=MS.gene61999.t1 |
| chr7.2 | CDS | 80435139 | 80436104 | 80435139 | ID=cds.MS.gene61999.t1;Parent=MS.gene61999.t1 |
| chr7.2 | exon | 80434187 | 80434402 | 80434187 | ID=MS.gene61999.t1.exon2;Parent=MS.gene61999.t1 |
| chr7.2 | CDS | 80434187 | 80434402 | 80434187 | ID=cds.MS.gene61999.t1;Parent=MS.gene61999.t1 |
| chr7.2 | exon | 80433955 | 80434097 | 80433955 | ID=MS.gene61999.t1.exon3;Parent=MS.gene61999.t1 |
| chr7.2 | CDS | 80433955 | 80434097 | 80433955 | ID=cds.MS.gene61999.t1;Parent=MS.gene61999.t1 |
| chr7.2 | exon | 80433792 | 80433858 | 80433792 | ID=MS.gene61999.t1.exon4;Parent=MS.gene61999.t1 |
| chr7.2 | CDS | 80433792 | 80433858 | 80433792 | ID=cds.MS.gene61999.t1;Parent=MS.gene61999.t1 |
| chr7.2 | exon | 80431634 | 80431692 | 80431634 | ID=MS.gene61999.t1.exon5;Parent=MS.gene61999.t1 |
| chr7.2 | CDS | 80431634 | 80431692 | 80431634 | ID=cds.MS.gene61999.t1;Parent=MS.gene61999.t1 |
| chr7.2 | exon | 80430114 | 80430231 | 80430114 | ID=MS.gene61999.t1.exon6;Parent=MS.gene61999.t1 |
| chr7.2 | CDS | 80430114 | 80430231 | 80430114 | ID=cds.MS.gene61999.t1;Parent=MS.gene61999.t1 |
| chr7.2 | exon | 80429876 | 80429989 | 80429876 | ID=MS.gene61999.t1.exon7;Parent=MS.gene61999.t1 |
| chr7.2 | CDS | 80429876 | 80429989 | 80429876 | ID=cds.MS.gene61999.t1;Parent=MS.gene61999.t1 |
| chr7.2 | exon | 80429556 | 80429687 | 80429556 | ID=MS.gene61999.t1.exon8;Parent=MS.gene61999.t1 |
| chr7.2 | CDS | 80429556 | 80429687 | 80429556 | ID=cds.MS.gene61999.t1;Parent=MS.gene61999.t1 |
| chr7.2 | exon | 80429054 | 80429470 | 80429054 | ID=MS.gene61999.t1.exon9;Parent=MS.gene61999.t1 |
| chr7.2 | CDS | 80429054 | 80429470 | 80429054 | ID=cds.MS.gene61999.t1;Parent=MS.gene61999.t1 |
| chr7.2 | exon | 80428457 | 80428507 | 80428457 | ID=MS.gene61999.t1.exon10;Parent=MS.gene61999.t1 |
| chr7.2 | CDS | 80428457 | 80428507 | 80428457 | ID=cds.MS.gene61999.t1;Parent=MS.gene61999.t1 |
| chr7.2 | exon | 80427119 | 80427189 | 80427119 | ID=MS.gene61999.t1.exon11;Parent=MS.gene61999.t1 |
| chr7.2 | CDS | 80427119 | 80427189 | 80427119 | ID=cds.MS.gene61999.t1;Parent=MS.gene61999.t1 |
| chr7.2 | exon | 80425079 | 80425163 | 80425079 | ID=MS.gene61999.t1.exon12;Parent=MS.gene61999.t1 |
| chr7.2 | CDS | 80425079 | 80425163 | 80425079 | ID=cds.MS.gene61999.t1;Parent=MS.gene61999.t1 |
| chr7.2 | exon | 80424717 | 80424869 | 80424717 | ID=MS.gene61999.t1.exon13;Parent=MS.gene61999.t1 |
| chr7.2 | CDS | 80424717 | 80424869 | 80424717 | ID=cds.MS.gene61999.t1;Parent=MS.gene61999.t1 |
| chr7.2 | exon | 80424556 | 80424630 | 80424556 | ID=MS.gene61999.t1.exon14;Parent=MS.gene61999.t1 |
| chr7.2 | CDS | 80424556 | 80424630 | 80424556 | ID=cds.MS.gene61999.t1;Parent=MS.gene61999.t1 |
| chr7.2 | exon | 80424312 | 80424401 | 80424312 | ID=MS.gene61999.t1.exon15;Parent=MS.gene61999.t1 |
| chr7.2 | CDS | 80424312 | 80424401 | 80424312 | ID=cds.MS.gene61999.t1;Parent=MS.gene61999.t1 |
| chr7.2 | exon | 80424155 | 80424202 | 80424155 | ID=MS.gene61999.t1.exon16;Parent=MS.gene61999.t1 |
| chr7.2 | CDS | 80424155 | 80424202 | 80424155 | ID=cds.MS.gene61999.t1;Parent=MS.gene61999.t1 |
| chr7.2 | exon | 80423591 | 80423705 | 80423591 | ID=MS.gene61999.t1.exon17;Parent=MS.gene61999.t1 |
| chr7.2 | CDS | 80423591 | 80423705 | 80423591 | ID=cds.MS.gene61999.t1;Parent=MS.gene61999.t1 |
| chr7.2 | exon | 80423242 | 80423345 | 80423242 | ID=MS.gene61999.t1.exon18;Parent=MS.gene61999.t1 |
| chr7.2 | CDS | 80423242 | 80423345 | 80423242 | ID=cds.MS.gene61999.t1;Parent=MS.gene61999.t1 |
| chr7.2 | exon | 80422566 | 80422676 | 80422566 | ID=MS.gene61999.t1.exon19;Parent=MS.gene61999.t1 |
| chr7.2 | CDS | 80422566 | 80422676 | 80422566 | ID=cds.MS.gene61999.t1;Parent=MS.gene61999.t1 |
| Gene Sequence |
| Protein sequence |
