Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64825.t1 | AES95221.2 | 76.5 | 388 | 49 | 3 | 1 | 358 | 105 | 480 | 2.80E-97 | 365.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64825.t1 | Q05753 | 47.5 | 223 | 101 | 4 | 1 | 220 | 100 | 309 | 2.7e-48 | 194.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64825.t1 | G7JYS4 | 76.5 | 388 | 49 | 3 | 1 | 358 | 105 | 480 | 2.1e-97 | 365.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049149 | MS.gene64825 | 0.812001 | 5.28E-51 | -1.69E-46 |
| MS.gene049170 | MS.gene64825 | 0.801001 | 1.11E-48 | -1.69E-46 |
| MS.gene050426 | MS.gene64825 | -0.835704 | 1.44E-56 | -1.69E-46 |
| MS.gene052011 | MS.gene64825 | -0.814889 | 1.22E-51 | -1.69E-46 |
| MS.gene052134 | MS.gene64825 | 0.813903 | 2.02E-51 | -1.69E-46 |
| MS.gene052135 | MS.gene64825 | 0.817536 | 3.13E-52 | -1.69E-46 |
| MS.gene052414 | MS.gene64825 | 0.813175 | 2.92E-51 | -1.69E-46 |
| MS.gene052469 | MS.gene64825 | 0.84083 | 6.87E-58 | -1.69E-46 |
| MS.gene053330 | MS.gene64825 | 0.810258 | 1.26E-50 | -1.69E-46 |
| MS.gene055539 | MS.gene64825 | 0.84965 | 2.82E-60 | -1.69E-46 |
| MS.gene05553 | MS.gene64825 | 0.803248 | 3.82E-49 | -1.69E-46 |
| MS.gene056659 | MS.gene64825 | 0.824663 | 7.14E-54 | -1.69E-46 |
| MS.gene057396 | MS.gene64825 | 0.816005 | 6.91E-52 | -1.69E-46 |
| MS.gene058142 | MS.gene64825 | 0.821994 | 3.00E-53 | -1.69E-46 |
| MS.gene059285 | MS.gene64825 | 0.801579 | 8.43E-49 | -1.69E-46 |
| MS.gene059420 | MS.gene64825 | 0.820233 | 7.64E-53 | -1.69E-46 |
| MS.gene059717 | MS.gene64825 | 0.802138 | 6.47E-49 | -1.69E-46 |
| MS.gene059946 | MS.gene64825 | 0.803927 | 2.76E-49 | -1.69E-46 |
| MS.gene061154 | MS.gene64825 | 0.801005 | 1.10E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64825.t1 | MTR_5g023090 | 84.085 | 377 | 40 | 3 | 1 | 358 | 105 | 480 | 0.0 | 627 |
| MS.gene64825.t1 | MTR_5g022050 | 72.423 | 359 | 68 | 4 | 1 | 358 | 100 | 428 | 1.24e-175 | 495 |
| MS.gene64825.t1 | MTR_5g022050 | 72.862 | 269 | 60 | 3 | 1 | 268 | 110 | 366 | 6.56e-130 | 377 |
| MS.gene64825.t1 | MTR_2g048680 | 44.865 | 185 | 100 | 2 | 147 | 330 | 124 | 307 | 2.04e-51 | 174 |
| MS.gene64825.t1 | MTR_2g048680 | 41.379 | 203 | 117 | 2 | 128 | 330 | 27 | 227 | 1.74e-49 | 166 |
| MS.gene64825.t1 | MTR_5g043640 | 31.655 | 139 | 94 | 1 | 169 | 307 | 89 | 226 | 4.89e-15 | 74.3 |
| MS.gene64825.t1 | MTR_5g043640 | 32.353 | 136 | 90 | 1 | 174 | 307 | 58 | 193 | 1.75e-14 | 72.8 |
| MS.gene64825.t1 | MTR_5g026800 | 30.657 | 137 | 95 | 0 | 174 | 310 | 15 | 151 | 3.04e-14 | 72.4 |
| MS.gene64825.t1 | MTR_5g077770 | 37.179 | 156 | 89 | 4 | 173 | 327 | 591 | 738 | 2.49e-12 | 68.9 |
| MS.gene64825.t1 | MTR_2g096760 | 30.675 | 163 | 95 | 4 | 169 | 314 | 45 | 206 | 6.86e-12 | 67.0 |
| MS.gene64825.t1 | MTR_6g027840 | 26.172 | 256 | 175 | 6 | 82 | 325 | 111 | 364 | 1.88e-11 | 65.9 |
| MS.gene64825.t1 | MTR_3g491870 | 34.234 | 111 | 69 | 2 | 204 | 310 | 233 | 343 | 3.06e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64825.t1 | AT5G66055 | 56.156 | 333 | 130 | 4 | 1 | 330 | 100 | 419 | 3.09e-124 | 365 |
| MS.gene64825.t1 | AT5G66055 | 52.381 | 273 | 114 | 4 | 1 | 270 | 100 | 359 | 5.57e-88 | 270 |
| MS.gene64825.t1 | AT5G40160 | 46.277 | 188 | 99 | 2 | 147 | 333 | 128 | 314 | 3.27e-50 | 171 |
| MS.gene64825.t1 | AT5G40160 | 46.154 | 156 | 82 | 2 | 147 | 301 | 128 | 282 | 3.60e-40 | 144 |
| MS.gene64825.t1 | AT5G53470 | 36.000 | 100 | 62 | 1 | 213 | 310 | 225 | 324 | 2.19e-13 | 70.9 |
| MS.gene64825.t1 | AT4G27780 | 40.506 | 79 | 47 | 0 | 232 | 310 | 261 | 339 | 1.23e-12 | 68.9 |
| MS.gene64825.t1 | AT2G14255 | 32.450 | 151 | 98 | 3 | 162 | 309 | 83 | 232 | 7.16e-12 | 67.0 |
| MS.gene64825.t1 | AT2G25600 | 33.803 | 142 | 91 | 2 | 174 | 315 | 581 | 719 | 1.15e-11 | 67.0 |
| MS.gene64825.t1 | AT5G02620 | 28.251 | 223 | 148 | 8 | 154 | 369 | 108 | 325 | 3.97e-11 | 64.7 |
| MS.gene64825.t1 | AT5G02620 | 28.251 | 223 | 148 | 8 | 154 | 369 | 108 | 325 | 3.97e-11 | 64.7 |
| MS.gene64825.t1 | AT5G02620 | 28.251 | 223 | 148 | 8 | 154 | 369 | 108 | 325 | 3.97e-11 | 64.7 |
| MS.gene64825.t1 | AT2G03430 | 30.216 | 139 | 96 | 1 | 169 | 307 | 82 | 219 | 4.64e-11 | 62.8 |
| MS.gene64825.t1 | AT2G31820 | 26.778 | 239 | 157 | 8 | 103 | 328 | 182 | 415 | 9.99e-11 | 63.9 |
Find 68 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCATTATTTGTAGGATAAA+TGG | 0.172018 | 5.1:+13919238 | MS.gene64825:intron |
| AATCCTAGGTGGGCTGTTTA+TGG | 0.193086 | 5.1:+13917452 | MS.gene64825:CDS |
| ATAATCTTGTTCCTGATAAA+TGG | 0.227663 | 5.1:+13917129 | MS.gene64825:CDS |
| GTTGGTTCCTTTGAGGGATA+TGG | 0.236009 | 5.1:+13917283 | MS.gene64825:CDS |
| TGAACTTGTTTCCATTTATC+AGG | 0.246834 | 5.1:-13917140 | None:intergenic |
| GCTCTTTACAAAGCAATAAT+TGG | 0.250325 | 5.1:+13919452 | MS.gene64825:CDS |
| GACTCTGCTGCTAAGAAAAT+TGG | 0.257867 | 5.1:+13917521 | MS.gene64825:CDS |
| GTGGAGCTTCTGCTGATTAA+AGG | 0.288035 | 5.1:+13920269 | MS.gene64825:CDS |
| GCTGCAACAAAGTATCTAAA+AGG | 0.328401 | 5.1:-13919299 | None:intergenic |
| AGCTTATAAAGAAACTAAAT+TGG | 0.344627 | 5.1:+13917322 | MS.gene64825:CDS |
| GCTATTCTTCACTTCCTTGT+TGG | 0.353333 | 5.1:-13921456 | None:intergenic |
| TCAATCTCTTGAGCTTTCTT+AGG | 0.357792 | 5.1:-13917227 | None:intergenic |
| ATTGGCTCAGCTGACGCCTT+TGG | 0.365909 | 5.1:+13917340 | MS.gene64825:CDS |
| CCGTCGGGCGCGTCTATATA+AGG | 0.372189 | 5.1:-13921395 | None:intergenic |
| CAATGTGGATATAAATCTTC+GGG | 0.377195 | 5.1:+13920099 | MS.gene64825:CDS |
| CTCTCGGGCGCGTCTATATA+AGG | 0.380106 | 5.1:-13921346 | None:intergenic |
| ATCCTAGGTGGGCTGTTTAT+GGG | 0.393025 | 5.1:+13917453 | MS.gene64825:CDS |
| GACGCCTTTGGTTCTTGATA+AGG | 0.399997 | 5.1:+13917352 | MS.gene64825:CDS |
| AGCAGAAGCTCCACTATATC+AGG | 0.401672 | 5.1:-13920260 | None:intergenic |
| CAGAGTTTCTCACGAGAAGA+TGG | 0.403613 | 5.1:-13919493 | None:intergenic |
| CTCACATTATCTTGCACAAA+CGG | 0.408366 | 5.1:-13919521 | None:intergenic |
| TTTATCAGGAACAAGATTAT+CGG | 0.417473 | 5.1:-13917126 | None:intergenic |
| AAGAAGGTTGGTTCCTTTGA+GGG | 0.419078 | 5.1:+13917277 | MS.gene64825:CDS |
| ACAATGTGGATATAAATCTT+CGG | 0.421567 | 5.1:+13920098 | MS.gene64825:CDS |
| TTGCTCTGTCTTAGGATGGC+TGG | 0.424376 | 5.1:+13920204 | MS.gene64825:intron |
| GAAAGGGTTGGAGGATGTTA+AGG | 0.424735 | 5.1:+13917475 | MS.gene64825:CDS |
| AAAGAAGGTTGGTTCCTTTG+AGG | 0.431464 | 5.1:+13917276 | MS.gene64825:CDS |
| TGATATTAATGCTATGGATA+AGG | 0.439944 | 5.1:+13919332 | MS.gene64825:CDS |
| TCTCACGAGAAGATGGGTTA+TGG | 0.444360 | 5.1:-13919486 | None:intergenic |
| AGGTGGGCTGTTTATGGGAA+AGG | 0.444581 | 5.1:+13917458 | MS.gene64825:CDS |
| ACAAGAGTGCTTTAATTGCT+CGG | 0.449055 | 5.1:-13920072 | None:intergenic |
| CAACAAATCCCTCTCTTCCC+AGG | 0.458338 | 5.1:-13918877 | None:intergenic |
| GGCTGTTTATGGGAAAGGGT+TGG | 0.464497 | 5.1:+13917463 | MS.gene64825:CDS |
| CAAGAGTGCTTTAATTGCTC+GGG | 0.466031 | 5.1:-13920071 | None:intergenic |
| ATAGACGCGCCCGACGGAAG+TGG | 0.466914 | 5.1:+13921401 | MS.gene64825:CDS |
| GGGTAGAGGCTAGGAATCCT+AGG | 0.467709 | 5.1:+13917438 | MS.gene64825:CDS |
| TGTTTATGGGAAAGGGTTGG+AGG | 0.474904 | 5.1:+13917466 | MS.gene64825:CDS |
| GACTCAGAGACCTGATATAG+TGG | 0.487183 | 5.1:+13920250 | MS.gene64825:CDS |
| GAAGTAGCAACTGTCAAGTC+TGG | 0.492247 | 5.1:-13918912 | None:intergenic |
| AACTTGATTAACTCGTCTCT+CGG | 0.494680 | 5.1:-13921362 | None:intergenic |
| GGTGGGCTGTTTATGGGAAA+GGG | 0.497865 | 5.1:+13917459 | MS.gene64825:CDS |
| GTGAAGAGAGGGTAGAGGCT+AGG | 0.499732 | 5.1:+13917429 | MS.gene64825:CDS |
| CTCGACCTTTGCCTTTACTC+TGG | 0.500612 | 5.1:+13921277 | MS.gene64825:CDS |
| ACTTGATTAACTCGTCTCTC+GGG | 0.510011 | 5.1:-13921361 | None:intergenic |
| TAGATGGGTTGAGTGAAGAG+AGG | 0.516517 | 5.1:+13917417 | MS.gene64825:CDS |
| AGATGGGTTGAGTGAAGAGA+GGG | 0.518172 | 5.1:+13917418 | MS.gene64825:CDS |
| AAGTTATGAAGCTGAAAAGA+AGG | 0.520767 | 5.1:+13917261 | MS.gene64825:CDS |
| TGTTGTTGATATTAATGCTA+TGG | 0.523920 | 5.1:+13919326 | MS.gene64825:CDS |
| GTTGAGTGAAGAGAGGGTAG+AGG | 0.529804 | 5.1:+13917424 | MS.gene64825:CDS |
| TATGAAGCTGAAAAGAAGGT+TGG | 0.530164 | 5.1:+13917265 | MS.gene64825:CDS |
| TTTGTTTACCTGGGAAGAGA+GGG | 0.546480 | 5.1:+13918869 | MS.gene64825:CDS |
| GTCTGAACAGCAAGATGTAA+TGG | 0.552014 | 5.1:-13920230 | None:intergenic |
| TGCTGATTAAAGGCGCTGAT+CGG | 0.556487 | 5.1:+13920279 | MS.gene64825:CDS |
| AGAGTTTCTCACGAGAAGAT+GGG | 0.560384 | 5.1:-13919492 | None:intergenic |
| TCTGCTGCTAAGAAAATTGG+AGG | 0.583455 | 5.1:+13917524 | MS.gene64825:CDS |
| GAGTAAAGGCAAAGGTCGAG+TGG | 0.584489 | 5.1:-13921274 | None:intergenic |
| TTCAAATCCATATCCCTCAA+AGG | 0.588549 | 5.1:-13917290 | None:intergenic |
| TAAACATAACAAAGAAAGAA+CGG | 0.601565 | 5.1:+13917204 | MS.gene64825:CDS |
| AGAGGCTAGGAATCCTAGGT+GGG | 0.610369 | 5.1:+13917442 | MS.gene64825:CDS |
| CTCGCAGCAAAAGTGTGCAA+AGG | 0.613261 | 5.1:-13919264 | None:intergenic |
| TAGAGGCTAGGAATCCTAGG+TGG | 0.621675 | 5.1:+13917441 | MS.gene64825:CDS |
| TTTGAAGATCTGGACCAACA+AGG | 0.648499 | 5.1:+13921442 | MS.gene64825:CDS |
| TTGTACAGCATAGTGCATCA+AGG | 0.649508 | 5.1:-13920038 | None:intergenic |
| TTCCCATAAACAGCCCACCT+AGG | 0.650174 | 5.1:-13917455 | None:intergenic |
| TTTGACCAGAGTAAAGGCAA+AGG | 0.667685 | 5.1:-13921282 | None:intergenic |
| GGAACCTTATCAAGAACCAA+AGG | 0.680338 | 5.1:-13917356 | None:intergenic |
| CCTTATATAGACGCGCCCGA+CGG | 0.680984 | 5.1:+13921395 | MS.gene64825:CDS |
| TACAGCATAGTGCATCAAGG+TGG | 0.722597 | 5.1:-13920035 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATCAATGTAAAAGAAA+TGG | - | chr5.1:13921213-13921232 | None:intergenic | 15.0% |
| !! | AACTATATGTTAATAGATTA+AGG | - | chr5.1:13919935-13919954 | None:intergenic | 15.0% |
| !! | AATAATTTACAAAATAGAAG+CGG | + | chr5.1:13920419-13920438 | MS.gene64825:intron | 15.0% |
| !! | ACTATATGTTAATAGATTAA+GGG | - | chr5.1:13919934-13919953 | None:intergenic | 15.0% |
| !! | ATTATATATTGAACTGTTAT+TGG | + | chr5.1:13918986-13919005 | MS.gene64825:intron | 15.0% |
| !! | GTTAGTTAAAACAAATTTAT+GGG | + | chr5.1:13918143-13918162 | MS.gene64825:intron | 15.0% |
| !! | TGAAATTGATAGATTAATAT+AGG | - | chr5.1:13920338-13920357 | None:intergenic | 15.0% |
| !! | TGTTAGTTAAAACAAATTTA+TGG | + | chr5.1:13918142-13918161 | MS.gene64825:intron | 15.0% |
| !!! | AAAACTTTCAATTGTTATTT+AGG | + | chr5.1:13920803-13920822 | MS.gene64825:intron | 15.0% |
| !!! | CTCTATATTTATGTTTTTAA+TGG | + | chr5.1:13919209-13919228 | MS.gene64825:intron | 15.0% |
| !!! | TATATATGGTTTTTAAATGT+TGG | + | chr5.1:13918799-13918818 | MS.gene64825:intron | 15.0% |
| !! | AAAAATGCTTATAAGTTTAC+CGG | + | chr5.1:13918167-13918186 | MS.gene64825:intron | 20.0% |
| !! | AACAAAATATTCATCAATGA+CGG | - | chr5.1:13921025-13921044 | None:intergenic | 20.0% |
| !! | AAGAAATATGAAAAAAGCAA+TGG | + | chr5.1:13918547-13918566 | MS.gene64825:intron | 20.0% |
| !! | AAGATAGTAGTATTAATTAG+GGG | - | chr5.1:13918422-13918441 | None:intergenic | 20.0% |
| !! | AATATGTTGAAAACAACTTA+TGG | + | chr5.1:13919816-13919835 | MS.gene64825:intron | 20.0% |
| !! | AATCACAATAGTTTAAATAG+AGG | - | chr5.1:13919403-13919422 | None:intergenic | 20.0% |
| !! | ACAAGATAGTAGTATTAATT+AGG | - | chr5.1:13918424-13918443 | None:intergenic | 20.0% |
| !! | AGAAATATGAAAAAAGCAAT+GGG | + | chr5.1:13918548-13918567 | MS.gene64825:intron | 20.0% |
| !! | AGCTTATAAAGAAACTAAAT+TGG | + | chr5.1:13917322-13917341 | MS.gene64825:CDS | 20.0% |
| !! | AGTTATCTGATTTAAATGAA+AGG | + | chr5.1:13920687-13920706 | MS.gene64825:intron | 20.0% |
| !! | ATAATTTACAAAATAGAAGC+GGG | + | chr5.1:13920420-13920439 | MS.gene64825:intron | 20.0% |
| !! | ATATAGAGATTATTAACCAA+AGG | - | chr5.1:13919197-13919216 | None:intergenic | 20.0% |
| !! | ATGTATCTAGTAATTTGAAA+AGG | - | chr5.1:13918376-13918395 | None:intergenic | 20.0% |
| !! | CAAGATAGTAGTATTAATTA+GGG | - | chr5.1:13918423-13918442 | None:intergenic | 20.0% |
| !! | GCTTCATATATTATTGTTTA+GGG | + | chr5.1:13917869-13917888 | MS.gene64825:intron | 20.0% |
| !! | GGACAAAAATAAAATCAAAT+GGG | - | chr5.1:13918340-13918359 | None:intergenic | 20.0% |
| !! | TAAACATAACAAAGAAAGAA+CGG | + | chr5.1:13917204-13917223 | MS.gene64825:CDS | 20.0% |
| !! | TCTATTGTATTAAAAACTCA+CGG | + | chr5.1:13918265-13918284 | MS.gene64825:intron | 20.0% |
| !! | TGCTTCATATATTATTGTTT+AGG | + | chr5.1:13917868-13917887 | MS.gene64825:intron | 20.0% |
| !! | TGTATCTAGTAATTTGAAAA+GGG | - | chr5.1:13918375-13918394 | None:intergenic | 20.0% |
| !! | TTTAATACACATACAAACAA+AGG | + | chr5.1:13918465-13918484 | MS.gene64825:intron | 20.0% |
| !!! | AAATAAAACTTTTGAAGATC+TGG | + | chr5.1:13921432-13921451 | MS.gene64825:CDS | 20.0% |
| !!! | AAATGGATCATTTTATTCAT+TGG | + | chr5.1:13918721-13918740 | MS.gene64825:intron | 20.0% |
| !!! | GACATTTTAAAAAATAAGTG+TGG | + | chr5.1:13918090-13918109 | MS.gene64825:intron | 20.0% |
| !!! | TGAATATAGATGCTTTTAAT+GGG | + | chr5.1:13920444-13920463 | MS.gene64825:intron | 20.0% |
| !!! | TGATTTGTTTTACTTTTTCA+AGG | + | chr5.1:13919418-13919437 | MS.gene64825:intron | 20.0% |
| !!! | TGCATTTGCTTTTAATTTAT+GGG | + | chr5.1:13918115-13918134 | MS.gene64825:intron | 20.0% |
| !!! | TTGCATTTGCTTTTAATTTA+TGG | + | chr5.1:13918114-13918133 | MS.gene64825:intron | 20.0% |
| !!! | TTTGTATTTACAATCTGTTT+TGG | + | chr5.1:13917550-13917569 | MS.gene64825:intron | 20.0% |
| ! | ACAATGTGGATATAAATCTT+CGG | + | chr5.1:13920098-13920117 | MS.gene64825:CDS | 25.0% |
| ! | ATAATCTTGTTCCTGATAAA+TGG | + | chr5.1:13917129-13917148 | MS.gene64825:CDS | 25.0% |
| ! | ATGAAAAAGTTGAGATATAG+AGG | + | chr5.1:13918220-13918239 | MS.gene64825:intron | 25.0% |
| ! | CTCATTATTTGTAGGATAAA+TGG | + | chr5.1:13919238-13919257 | MS.gene64825:intron | 25.0% |
| ! | GAAATTTGATTGCGATAAAA+TGG | + | chr5.1:13918704-13918723 | MS.gene64825:intron | 25.0% |
| ! | GCTAATTAGATTATTGTGTT+GGG | + | chr5.1:13917752-13917771 | MS.gene64825:intron | 25.0% |
| ! | GGGACAAAAATAAAATCAAA+TGG | - | chr5.1:13918341-13918360 | None:intergenic | 25.0% |
| ! | GTAAGAAAATCAACAGATAA+AGG | - | chr5.1:13919588-13919607 | None:intergenic | 25.0% |
| ! | GTATCTAGTAATTTGAAAAG+GGG | - | chr5.1:13918374-13918393 | None:intergenic | 25.0% |
| ! | TCTCATTGTTTGCATATATA+TGG | + | chr5.1:13918785-13918804 | MS.gene64825:intron | 25.0% |
| ! | TGATATTAATGCTATGGATA+AGG | + | chr5.1:13919332-13919351 | MS.gene64825:CDS | 25.0% |
| ! | TGCTAATTAGATTATTGTGT+TGG | + | chr5.1:13917751-13917770 | MS.gene64825:intron | 25.0% |
| ! | TGTTGTTGATATTAATGCTA+TGG | + | chr5.1:13919326-13919345 | MS.gene64825:CDS | 25.0% |
| ! | TTATATGTAACCTCATGTAT+TGG | + | chr5.1:13920578-13920597 | MS.gene64825:intron | 25.0% |
| ! | TTTATCAGGAACAAGATTAT+CGG | - | chr5.1:13917129-13917148 | None:intergenic | 25.0% |
| !! | AAAGTTTTTCTTCAACTGAT+AGG | - | chr5.1:13920791-13920810 | None:intergenic | 25.0% |
| !! | AATCAGATAACTAGTTCTTA+AGG | - | chr5.1:13920679-13920698 | None:intergenic | 25.0% |
| !! | ATCTTCATTTTATCCGATTT+TGG | + | chr5.1:13918761-13918780 | MS.gene64825:intron | 25.0% |
| !! | CTGAATATAGATGCTTTTAA+TGG | + | chr5.1:13920443-13920462 | MS.gene64825:intron | 25.0% |
| !! | GTTTTTAAATGTTGGCATTT+TGG | + | chr5.1:13918807-13918826 | MS.gene64825:intron | 25.0% |
| !! | TATTAATTAGGGGTATGTTT+AGG | - | chr5.1:13918412-13918431 | None:intergenic | 25.0% |
| !! | TCTCTTTAGATAAGTGTTTT+TGG | + | chr5.1:13918600-13918619 | MS.gene64825:intron | 25.0% |
| !! | TGAATTTTGTTCTCAAACAT+CGG | - | chr5.1:13920183-13920202 | None:intergenic | 25.0% |
| !! | TGATCAATTTTTCCAATACT+TGG | + | chr5.1:13920130-13920149 | MS.gene64825:intron | 25.0% |
| !!! | AGTTGCATTTTTTTCAATGT+TGG | + | chr5.1:13919125-13919144 | MS.gene64825:intron | 25.0% |
| !!! | TAATTTTTTGATCCAAGCAT+AGG | - | chr5.1:13920891-13920910 | None:intergenic | 25.0% |
| !!! | TTGTTTTACTTTTTCAAGGA+TGG | + | chr5.1:13919422-13919441 | MS.gene64825:intron | 25.0% |
| AAAATGTCAATACATCACCA+AGG | - | chr5.1:13918078-13918097 | None:intergenic | 30.0% | |
| AAATTCATTTGCTCTGTCTT+AGG | + | chr5.1:13920196-13920215 | MS.gene64825:intron | 30.0% | |
| AAGAAGGAAAAAGAAGTAGA+TGG | + | chr5.1:13917401-13917420 | MS.gene64825:CDS | 30.0% | |
| AAGTTATGAAGCTGAAAAGA+AGG | + | chr5.1:13917261-13917280 | MS.gene64825:CDS | 30.0% | |
| ACACAGAAGATTATAATGTG+TGG | + | chr5.1:13919374-13919393 | MS.gene64825:intron | 30.0% | |
| AGAAGGAAAAAGAAGTAGAT+GGG | + | chr5.1:13917402-13917421 | MS.gene64825:CDS | 30.0% | |
| AGCGATACAGATAAATATAC+CGG | - | chr5.1:13917849-13917868 | None:intergenic | 30.0% | |
| CAAACAATGAGAACCAAAAT+CGG | - | chr5.1:13918777-13918796 | None:intergenic | 30.0% | |
| CAATGTGGATATAAATCTTC+GGG | + | chr5.1:13920099-13920118 | MS.gene64825:CDS | 30.0% | |
| CGTTGTTATCATTACATCTT+AGG | + | chr5.1:13919661-13919680 | MS.gene64825:intron | 30.0% | |
| CTAAGATTACTCAACATCAA+CGG | - | chr5.1:13919069-13919088 | None:intergenic | 30.0% | |
| GAGACTAGAAGTTATTACAT+AGG | - | chr5.1:13917616-13917635 | None:intergenic | 30.0% | |
| GCTCTTTACAAAGCAATAAT+TGG | + | chr5.1:13919452-13919471 | MS.gene64825:CDS | 30.0% | |
| TAAACAACAAAGCAAATGCA+TGG | - | chr5.1:13919994-13920013 | None:intergenic | 30.0% | |
| TACGTTTGGTATATATGTGT+CGG | + | chr5.1:13917698-13917717 | MS.gene64825:intron | 30.0% | |
| TGAAAAGGGGTTTACATTTA+GGG | - | chr5.1:13918361-13918380 | None:intergenic | 30.0% | |
| TGATCGGACATTAAAAAACA+AGG | + | chr5.1:13920295-13920314 | MS.gene64825:CDS | 30.0% | |
| TTACTTCAACATCAAAACGA+AGG | - | chr5.1:13919034-13919053 | None:intergenic | 30.0% | |
| TTATATCCTTAGTTAGCTGT+TGG | + | chr5.1:13919956-13919975 | MS.gene64825:intron | 30.0% | |
| TTCTCAGCAAAACAAAAACT+CGG | - | chr5.1:13917380-13917399 | None:intergenic | 30.0% | |
| TTGAAAAGGGGTTTACATTT+AGG | - | chr5.1:13918362-13918381 | None:intergenic | 30.0% | |
| TTTAATGACTCTGACAACTT+TGG | - | chr5.1:13920766-13920785 | None:intergenic | 30.0% | |
| ! | ACTGTTTTCATTAGCTATTC+TGG | + | chr5.1:13919782-13919801 | MS.gene64825:intron | 30.0% |
| ! | AGATAACTAGTTCTTAAGGA+CGG | - | chr5.1:13920675-13920694 | None:intergenic | 30.0% |
| ! | ATCTACCTCTTATTCTTTTG+TGG | + | chr5.1:13920156-13920175 | MS.gene64825:intron | 30.0% |
| ! | ATTTATCTCTTGTTTGTCTC+AGG | + | chr5.1:13921240-13921259 | MS.gene64825:intron | 30.0% |
| ! | CTGTTTTCATTAGCTATTCT+GGG | + | chr5.1:13919783-13919802 | MS.gene64825:intron | 30.0% |
| ! | TAATAGATTAAGGGCATGTT+TGG | - | chr5.1:13919925-13919944 | None:intergenic | 30.0% |
| ! | TGAACTTGTTTCCATTTATC+AGG | - | chr5.1:13917143-13917162 | None:intergenic | 30.0% |
| ! | TGGATCATTTTATTCATTGG+CGG | + | chr5.1:13918724-13918743 | MS.gene64825:intron | 30.0% |
| ! | TTCTGCTTGTTAGATAACTT+TGG | + | chr5.1:13918014-13918033 | MS.gene64825:intron | 30.0% |
| !! | TACTAGAGTATTGTTCAACT+CGG | + | chr5.1:13921074-13921093 | MS.gene64825:intron | 30.0% |
| !! | TTGTTTTGCTGAGAAAAAGA+AGG | + | chr5.1:13917385-13917404 | MS.gene64825:CDS | 30.0% |
| !! | TTTAACTTTTCAATAAGCGC+CGG | - | chr5.1:13918189-13918208 | None:intergenic | 30.0% |
| !!! | TCTTCCTTTTTTGTTTACCT+GGG | + | chr5.1:13918860-13918879 | MS.gene64825:CDS | 30.0% |
| !!! | TTAGATAAGTGTTTTTGGAG+AGG | + | chr5.1:13918605-13918624 | MS.gene64825:intron | 30.0% |
| AACTTGATTAACTCGTCTCT+CGG | - | chr5.1:13921365-13921384 | None:intergenic | 35.0% | |
| AAGCAAATGCATGGAATATC+AGG | - | chr5.1:13919985-13920004 | None:intergenic | 35.0% | |
| AGACTATTCAGAAGAGCTTA+TGG | - | chr5.1:13919861-13919880 | None:intergenic | 35.0% | |
| ATCCAAAATGGCTCTTAAGT+TGG | + | chr5.1:13918631-13918650 | MS.gene64825:intron | 35.0% | |
| CAAAAAAGGAAGACCTATTC+AGG | - | chr5.1:13918853-13918872 | None:intergenic | 35.0% | |
| CAAATGGGTGCTTAGATATA+GGG | - | chr5.1:13918325-13918344 | None:intergenic | 35.0% | |
| CATACACATGTAGTTACCTT+TGG | + | chr5.1:13917801-13917820 | MS.gene64825:intron | 35.0% | |
| CATCATCCATTAAGTACCAA+AGG | - | chr5.1:13918670-13918689 | None:intergenic | 35.0% | |
| CTATGTGTCAATGTCATATC+CGG | + | chr5.1:13917955-13917974 | MS.gene64825:intron | 35.0% | |
| CTCACATTATCTTGCACAAA+CGG | - | chr5.1:13919524-13919543 | None:intergenic | 35.0% | |
| GGCTAACACTCATTATTTGT+AGG | + | chr5.1:13919230-13919249 | MS.gene64825:intron | 35.0% | |
| GGTAAAATATCAGTTGTCAC+TGG | + | chr5.1:13920472-13920491 | MS.gene64825:intron | 35.0% | |
| GTAGTGAAAATCAACTTCCT+TGG | + | chr5.1:13918058-13918077 | MS.gene64825:intron | 35.0% | |
| GTTGTCTAGCAGATTAATAC+TGG | + | chr5.1:13921187-13921206 | MS.gene64825:intron | 35.0% | |
| TATGAAGCTGAAAAGAAGGT+TGG | + | chr5.1:13917265-13917284 | MS.gene64825:CDS | 35.0% | |
| TCAAATGGGTGCTTAGATAT+AGG | - | chr5.1:13918326-13918345 | None:intergenic | 35.0% | |
| TCAACAAAGAAGCAAGTGAT+TGG | - | chr5.1:13920844-13920863 | None:intergenic | 35.0% | |
| TCAATCTCTTGAGCTTTCTT+AGG | - | chr5.1:13917230-13917249 | None:intergenic | 35.0% | |
| TCACAACCTTTGGTACTTAA+TGG | + | chr5.1:13918661-13918680 | MS.gene64825:intron | 35.0% | |
| TCTTCCCAGGTAAACAAAAA+AGG | - | chr5.1:13918867-13918886 | None:intergenic | 35.0% | |
| TCTTTCATACTTGCCTGAAT+AGG | + | chr5.1:13918837-13918856 | MS.gene64825:intron | 35.0% | |
| TGAGTAATCTTAGTAGCTGT+TGG | + | chr5.1:13919076-13919095 | MS.gene64825:intron | 35.0% | |
| TTCAAATCCATATCCCTCAA+AGG | - | chr5.1:13917293-13917312 | None:intergenic | 35.0% | |
| TTGGAGAGGTTTATCCAAAA+TGG | + | chr5.1:13918619-13918638 | MS.gene64825:intron | 35.0% | |
| TTGTGTCTGACACAAATACT+TGG | - | chr5.1:13917912-13917931 | None:intergenic | 35.0% | |
| TTTGTTAATGTACGTTGTCG+AGG | + | chr5.1:13917580-13917599 | MS.gene64825:intron | 35.0% | |
| ! | AATCATGATAGAAGTGTAGG+AGG | + | chr5.1:13919148-13919167 | MS.gene64825:intron | 35.0% |
| ! | ATGCATTCAATCTGAAGTGT+TGG | + | chr5.1:13920621-13920640 | MS.gene64825:intron | 35.0% |
| ! | ATTCACTTGTTTGTTGCCTT+TGG | + | chr5.1:13919178-13919197 | MS.gene64825:intron | 35.0% |
| ! | CTTTGGTACTTAATGGATGA+TGG | + | chr5.1:13918668-13918687 | MS.gene64825:intron | 35.0% |
| ! | GATAACTAGTTCTTAAGGAC+GGG | - | chr5.1:13920674-13920693 | None:intergenic | 35.0% |
| ! | GCTGCAACAAAGTATCTAAA+AGG | - | chr5.1:13919302-13919321 | None:intergenic | 35.0% |
| ! | TGGAATCATGATAGAAGTGT+AGG | + | chr5.1:13919145-13919164 | MS.gene64825:intron | 35.0% |
| ! | TTTTTCTTATCCACTTCCGT+CGG | - | chr5.1:13921414-13921433 | None:intergenic | 35.0% |
| !! | ACAAGAGTGCTTTAATTGCT+CGG | - | chr5.1:13920075-13920094 | None:intergenic | 35.0% |
| !! | AGATGCTTTTAATGGGTCAT+TGG | + | chr5.1:13920451-13920470 | MS.gene64825:intron | 35.0% |
| !! | TGACATTTTGACCAGAGTAA+AGG | - | chr5.1:13921291-13921310 | None:intergenic | 35.0% |
| !! | TTGCTTTGTTGTTTATGTGC+TGG | + | chr5.1:13919999-13920018 | MS.gene64825:intron | 35.0% |
| !!! | AGCACTCTTGTTTTACAATG+TGG | + | chr5.1:13920084-13920103 | MS.gene64825:CDS | 35.0% |
| !!! | GTCTTCCTTTTTTGTTTACC+TGG | + | chr5.1:13918859-13918878 | MS.gene64825:CDS | 35.0% |
| ACAAACATTCATCATGACCC+TGG | + | chr5.1:13920381-13920400 | MS.gene64825:intron | 40.0% | |
| ACAACGATGAATTTCCAGTG+AGG | - | chr5.1:13919647-13919666 | None:intergenic | 40.0% | |
| ACTTGATTAACTCGTCTCTC+GGG | - | chr5.1:13921364-13921383 | None:intergenic | 40.0% | |
| AGAGTTTCTCACGAGAAGAT+GGG | - | chr5.1:13919495-13919514 | None:intergenic | 40.0% | |
| AGATTACTCAACATCAACGG+TGG | - | chr5.1:13919066-13919085 | None:intergenic | 40.0% | |
| AGCAACACAGATGCATATAC+CGG | - | chr5.1:13917977-13917996 | None:intergenic | 40.0% | |
| AGGATACCAACAGCTAACTA+AGG | - | chr5.1:13919965-13919984 | None:intergenic | 40.0% | |
| CAAACACACGTAGTTACGTT+TGG | + | chr5.1:13917684-13917703 | MS.gene64825:intron | 40.0% | |
| CAACATGACACCAATACATG+AGG | - | chr5.1:13920591-13920610 | None:intergenic | 40.0% | |
| CAACGATGAATTTCCAGTGA+GGG | - | chr5.1:13919646-13919665 | None:intergenic | 40.0% | |
| CACTGACATGTAGATACCAA+AGG | - | chr5.1:13917820-13917839 | None:intergenic | 40.0% | |
| CGAGATTCTCCCTTTAAACA+GGG | + | chr5.1:13920732-13920751 | MS.gene64825:intron | 40.0% | |
| CTACATGTCAGTGTCATATC+CGG | + | chr5.1:13917827-13917846 | MS.gene64825:intron | 40.0% | |
| GAAAGACGTCCCTGTTTAAA+GGG | - | chr5.1:13920744-13920763 | None:intergenic | 40.0% | |
| GACTCTGCTGCTAAGAAAAT+TGG | + | chr5.1:13917521-13917540 | MS.gene64825:CDS | 40.0% | |
| GAGGTAGATAAGCCAAGTAT+TGG | - | chr5.1:13920145-13920164 | None:intergenic | 40.0% | |
| GGAACCTTATCAAGAACCAA+AGG | - | chr5.1:13917359-13917378 | None:intergenic | 40.0% | |
| GTCTGAACAGCAAGATGTAA+TGG | - | chr5.1:13920233-13920252 | None:intergenic | 40.0% | |
| GTTGTTTATGTGCTGGAAAC+AGG | + | chr5.1:13920006-13920025 | MS.gene64825:intron | 40.0% | |
| TCAGTCATTGCTCATAGACA+TGG | - | chr5.1:13918948-13918967 | None:intergenic | 40.0% | |
| TCATTTGCTCTGTCTTAGGA+TGG | + | chr5.1:13920200-13920219 | MS.gene64825:intron | 40.0% | |
| TCGAGATTCTCCCTTTAAAC+AGG | + | chr5.1:13920731-13920750 | MS.gene64825:intron | 40.0% | |
| TCGGTCCACAAAAGAATAAG+AGG | - | chr5.1:13920164-13920183 | None:intergenic | 40.0% | |
| TCTGCTGCTAAGAAAATTGG+AGG | + | chr5.1:13917524-13917543 | MS.gene64825:CDS | 40.0% | |
| TGTCTGACACCAATATGTGT+CGG | - | chr5.1:13917781-13917800 | None:intergenic | 40.0% | |
| TTATGTGCTGGAAACAGGAT+GGG | + | chr5.1:13920011-13920030 | MS.gene64825:intron | 40.0% | |
| TTGTACAGCATAGTGCATCA+AGG | - | chr5.1:13920041-13920060 | None:intergenic | 40.0% | |
| TTTATGTGCTGGAAACAGGA+TGG | + | chr5.1:13920010-13920029 | MS.gene64825:intron | 40.0% | |
| TTTGAAGATCTGGACCAACA+AGG | + | chr5.1:13921442-13921461 | MS.gene64825:CDS | 40.0% | |
| TTTGACCAGAGTAAAGGCAA+AGG | - | chr5.1:13921285-13921304 | None:intergenic | 40.0% | |
| TTTGTTTACCTGGGAAGAGA+GGG | + | chr5.1:13918869-13918888 | MS.gene64825:CDS | 40.0% | |
| ! | AAAGAAGGTTGGTTCCTTTG+AGG | + | chr5.1:13917276-13917295 | MS.gene64825:CDS | 40.0% |
| ! | AAGAAGGTTGGTTCCTTTGA+GGG | + | chr5.1:13917277-13917296 | MS.gene64825:CDS | 40.0% |
| ! | ATCTCTTGTTTGTCTCAGGA+TGG | + | chr5.1:13921244-13921263 | MS.gene64825:intron | 40.0% |
| ! | ATTATCGATGTCAAAGTGCC+AGG | - | chr5.1:13920402-13920421 | None:intergenic | 40.0% |
| ! | CACCAACTTAAGAGCCATTT+TGG | - | chr5.1:13918636-13918655 | None:intergenic | 40.0% |
| ! | GATAGAAGTGTAGGAGGAAA+GGG | + | chr5.1:13919154-13919173 | MS.gene64825:intron | 40.0% |
| ! | TGATAGAAGTGTAGGAGGAA+AGG | + | chr5.1:13919153-13919172 | MS.gene64825:intron | 40.0% |
| ! | TTATCGATGTCAAAGTGCCA+GGG | - | chr5.1:13920401-13920420 | None:intergenic | 40.0% |
| ! | TTTTCTTATCCACTTCCGTC+GGG | - | chr5.1:13921413-13921432 | None:intergenic | 40.0% |
| !! | CAAGAGTGCTTTAATTGCTC+GGG | - | chr5.1:13920074-13920093 | None:intergenic | 40.0% |
| !! | CAAGCACATGTGGTTACTTT+TGG | + | chr5.1:13917929-13917948 | MS.gene64825:intron | 40.0% |
| !! | CTCATGTATTGGTGTCATGT+TGG | + | chr5.1:13920589-13920608 | MS.gene64825:intron | 40.0% |
| !! | TTTTGTTTACCTGGGAAGAG+AGG | + | chr5.1:13918868-13918887 | MS.gene64825:CDS | 40.0% |
| AGCAACACAGACACATGCAT+CGG | - | chr5.1:13917732-13917751 | None:intergenic | 45.0% | |
| AGCAATGGGTGCCTACATTA+AGG | + | chr5.1:13918562-13918581 | MS.gene64825:intron | 45.0% | |
| AGCAGAAGCTCCACTATATC+AGG | - | chr5.1:13920263-13920282 | None:intergenic | 45.0% | |
| ATACTTGGCAGGCACATGAA+CGG | - | chr5.1:13917897-13917916 | None:intergenic | 45.0% | |
| ATTCATTGGCGGTTGAGTTC+AGG | + | chr5.1:13918735-13918754 | MS.gene64825:intron | 45.0% | |
| CAGAGTTTCTCACGAGAAGA+TGG | - | chr5.1:13919496-13919515 | None:intergenic | 45.0% | |
| CTAGTCAGTAGTCCTATGCT+TGG | + | chr5.1:13920876-13920895 | MS.gene64825:intron | 45.0% | |
| GAAAGGGTTGGAGGATGTTA+AGG | + | chr5.1:13917475-13917494 | MS.gene64825:CDS | 45.0% | |
| GAAGTAGCAACTGTCAAGTC+TGG | - | chr5.1:13918915-13918934 | None:intergenic | 45.0% | |
| GACTCAGAGACCTGATATAG+TGG | + | chr5.1:13920250-13920269 | MS.gene64825:CDS | 45.0% | |
| GATGAATTTCCAGTGAGGGA+AGG | - | chr5.1:13919642-13919661 | None:intergenic | 45.0% | |
| GCAATGGGTGCCTACATTAA+GGG | + | chr5.1:13918563-13918582 | MS.gene64825:intron | 45.0% | |
| GGAAAGACGTCCCTGTTTAA+AGG | - | chr5.1:13920745-13920764 | None:intergenic | 45.0% | |
| GTCTGACACAAATACTTGGC+AGG | - | chr5.1:13917908-13917927 | None:intergenic | 45.0% | |
| GTTGGCTAATCGACGCATAA+CGG | - | chr5.1:13920946-13920965 | None:intergenic | 45.0% | |
| TACAGCATAGTGCATCAAGG+TGG | - | chr5.1:13920038-13920057 | None:intergenic | 45.0% | |
| TATGTGCTGGAAACAGGATG+GGG | + | chr5.1:13920012-13920031 | MS.gene64825:intron | 45.0% | |
| TGCTTAGATATAGGGACGGA+GGG | - | chr5.1:13918317-13918336 | None:intergenic | 45.0% | |
| TGGGTGCTTAGATATAGGGA+CGG | - | chr5.1:13918321-13918340 | None:intergenic | 45.0% | |
| TGTTTATGGGAAAGGGTTGG+AGG | + | chr5.1:13917466-13917485 | MS.gene64825:CDS | 45.0% | |
| ! | CTCTAGATTGAAAGCGTGTC+AGG | + | chr5.1:13917633-13917652 | MS.gene64825:intron | 45.0% |
| ! | GTGGAGCTTCTGCTGATTAA+AGG | + | chr5.1:13920269-13920288 | MS.gene64825:CDS | 45.0% |
| ! | GTTGGTTCCTTTGAGGGATA+TGG | + | chr5.1:13917283-13917302 | MS.gene64825:CDS | 45.0% |
| !! | AATCCTAGGTGGGCTGTTTA+TGG | + | chr5.1:13917452-13917471 | MS.gene64825:CDS | 45.0% |
| !! | AGATGGGTTGAGTGAAGAGA+GGG | + | chr5.1:13917418-13917437 | MS.gene64825:CDS | 45.0% |
| !! | ATCCTAGGTGGGCTGTTTAT+GGG | + | chr5.1:13917453-13917472 | MS.gene64825:CDS | 45.0% |
| !! | GACGCCTTTGGTTCTTGATA+AGG | + | chr5.1:13917352-13917371 | MS.gene64825:CDS | 45.0% |
| !! | TAGATGGGTTGAGTGAAGAG+AGG | + | chr5.1:13917417-13917436 | MS.gene64825:CDS | 45.0% |
| !! | TCTCACGAGAAGATGGGTTA+TGG | - | chr5.1:13919489-13919508 | None:intergenic | 45.0% |
| !! | TGCTGATTAAAGGCGCTGAT+CGG | + | chr5.1:13920279-13920298 | MS.gene64825:CDS | 45.0% |
| AGAGGCTAGGAATCCTAGGT+GGG | + | chr5.1:13917442-13917461 | MS.gene64825:CDS | 50.0% | |
| CAACAAATCCCTCTCTTCCC+AGG | - | chr5.1:13918880-13918899 | None:intergenic | 50.0% | |
| CTCACCTAGCAGAAGTGACA+AGG | + | chr5.1:13920973-13920992 | MS.gene64825:intron | 50.0% | |
| CTCGACCTTTGCCTTTACTC+TGG | + | chr5.1:13921277-13921296 | MS.gene64825:CDS | 50.0% | |
| GAGTAAAGGCAAAGGTCGAG+TGG | - | chr5.1:13921277-13921296 | None:intergenic | 50.0% | |
| GGCTGTTTATGGGAAAGGGT+TGG | + | chr5.1:13917463-13917482 | MS.gene64825:CDS | 50.0% | |
| GTCTAACACCATCACGTGTC+AGG | - | chr5.1:13917663-13917682 | None:intergenic | 50.0% | |
| GTGCTTAGATATAGGGACGG+AGG | - | chr5.1:13918318-13918337 | None:intergenic | 50.0% | |
| GTGTCAGACACAAGCACATG+TGG | + | chr5.1:13917919-13917938 | MS.gene64825:intron | 50.0% | |
| GTTGAGTGAAGAGAGGGTAG+AGG | + | chr5.1:13917424-13917443 | MS.gene64825:CDS | 50.0% | |
| GTTGGGTGTCCGACACATAT+TGG | + | chr5.1:13917769-13917788 | MS.gene64825:intron | 50.0% | |
| TAGAGGCTAGGAATCCTAGG+TGG | + | chr5.1:13917441-13917460 | MS.gene64825:CDS | 50.0% | |
| TGCCTACATTAAGGGACGGA+GGG | + | chr5.1:13918571-13918590 | MS.gene64825:intron | 50.0% | |
| TGCTAGGTGAGGACTGATGT+TGG | - | chr5.1:13920964-13920983 | None:intergenic | 50.0% | |
| TGGGTGCCTACATTAAGGGA+CGG | + | chr5.1:13918567-13918586 | MS.gene64825:intron | 50.0% | |
| TGTCAGTGTCAGTGCTTCGT+AGG | - | chr5.1:13920504-13920523 | None:intergenic | 50.0% | |
| TTCCCATAAACAGCCCACCT+AGG | - | chr5.1:13917458-13917477 | None:intergenic | 50.0% | |
| TTGCTCTGTCTTAGGATGGC+TGG | + | chr5.1:13920204-13920223 | MS.gene64825:intron | 50.0% | |
| ! | CAAGCCTTGTCACTTCTGCT+AGG | - | chr5.1:13920980-13920999 | None:intergenic | 50.0% |
| ! | CTCGCAGCAAAAGTGTGCAA+AGG | - | chr5.1:13919267-13919286 | None:intergenic | 50.0% |
| ! | CTTGTCACTTCTGCTAGGTG+AGG | - | chr5.1:13920975-13920994 | None:intergenic | 50.0% |
| ! | TTGCACACTTTTGCTGCGAG+TGG | + | chr5.1:13919267-13919286 | MS.gene64825:CDS | 50.0% |
| !! | AGGTGGGCTGTTTATGGGAA+AGG | + | chr5.1:13917458-13917477 | MS.gene64825:CDS | 50.0% |
| !! | GGTGGGCTGTTTATGGGAAA+GGG | + | chr5.1:13917459-13917478 | MS.gene64825:CDS | 50.0% |
| !! | TGGTGCTGCTTCACAACCTT+TGG | + | chr5.1:13918651-13918670 | MS.gene64825:intron | 50.0% |
| CCTTATATAGACGCGCCCGA+CGG | + | chr5.1:13921346-13921365 | MS.gene64825:CDS | 55.0% | |
| CTCCCTCCGTCCCTTAATGT+AGG | - | chr5.1:13918576-13918595 | None:intergenic | 55.0% | |
| CTCTCGGGCGCGTCTATATA+AGG | - | chr5.1:13921349-13921368 | None:intergenic | 55.0% | |
| GGGTAGAGGCTAGGAATCCT+AGG | + | chr5.1:13917438-13917457 | MS.gene64825:CDS | 55.0% | |
| GTGAAGAGAGGGTAGAGGCT+AGG | + | chr5.1:13917429-13917448 | MS.gene64825:CDS | 55.0% | |
| GTGCCTACATTAAGGGACGG+AGG | + | chr5.1:13918570-13918589 | MS.gene64825:intron | 55.0% | |
| TGTGCTCTTCCTTCCCTCAC+TGG | + | chr5.1:13919630-13919649 | MS.gene64825:intron | 55.0% | |
| ! | ATTGGCTCAGCTGACGCCTT+TGG | + | chr5.1:13917340-13917359 | MS.gene64825:CDS | 55.0% |
| CAGGTGCACCTGACACGTGA+TGG | + | chr5.1:13917652-13917671 | MS.gene64825:intron | 60.0% | |
| CCGTCGGGCGCGTCTATATA+AGG | - | chr5.1:13921398-13921417 | None:intergenic | 60.0% | |
| ATAGACGCGCCCGACGGAAG+TGG | + | chr5.1:13921401-13921420 | MS.gene64825:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 13917119 | 13921477 | 13917119 | ID=MS.gene64825 |
| chr5.1 | mRNA | 13917119 | 13921477 | 13917119 | ID=MS.gene64825.t1;Parent=MS.gene64825 |
| chr5.1 | exon | 13917119 | 13917545 | 13917119 | ID=MS.gene64825.t1.exon1;Parent=MS.gene64825.t1 |
| chr5.1 | CDS | 13917119 | 13917545 | 13917119 | ID=cds.MS.gene64825.t1;Parent=MS.gene64825.t1 |
| chr5.1 | exon | 13918859 | 13918935 | 13918859 | ID=MS.gene64825.t1.exon2;Parent=MS.gene64825.t1 |
| chr5.1 | CDS | 13918859 | 13918935 | 13918859 | ID=cds.MS.gene64825.t1;Parent=MS.gene64825.t1 |
| chr5.1 | exon | 13919252 | 13919353 | 13919252 | ID=MS.gene64825.t1.exon3;Parent=MS.gene64825.t1 |
| chr5.1 | CDS | 13919252 | 13919353 | 13919252 | ID=cds.MS.gene64825.t1;Parent=MS.gene64825.t1 |
| chr5.1 | exon | 13919440 | 13919538 | 13919440 | ID=MS.gene64825.t1.exon4;Parent=MS.gene64825.t1 |
| chr5.1 | CDS | 13919440 | 13919538 | 13919440 | ID=cds.MS.gene64825.t1;Parent=MS.gene64825.t1 |
| chr5.1 | exon | 13920028 | 13920126 | 13920028 | ID=MS.gene64825.t1.exon5;Parent=MS.gene64825.t1 |
| chr5.1 | CDS | 13920028 | 13920126 | 13920028 | ID=cds.MS.gene64825.t1;Parent=MS.gene64825.t1 |
| chr5.1 | exon | 13920218 | 13920316 | 13920218 | ID=MS.gene64825.t1.exon6;Parent=MS.gene64825.t1 |
| chr5.1 | CDS | 13920218 | 13920316 | 13920218 | ID=cds.MS.gene64825.t1;Parent=MS.gene64825.t1 |
| chr5.1 | exon | 13921262 | 13921477 | 13921262 | ID=MS.gene64825.t1.exon7;Parent=MS.gene64825.t1 |
| chr5.1 | CDS | 13921262 | 13921477 | 13921262 | ID=cds.MS.gene64825.t1;Parent=MS.gene64825.t1 |
| Gene Sequence |
| Protein sequence |
