Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66287.t1 | XP_013453257.1 | 95.1 | 812 | 38 | 2 | 1 | 812 | 1 | 810 | 0.00E+00 | 1493.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66287.t1 | F4IK92 | 41.0 | 825 | 452 | 17 | 1 | 812 | 14 | 816 | 2.1e-146 | 521.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66287.t1 | A0A072UCW5 | 95.1 | 812 | 38 | 2 | 1 | 812 | 1 | 810 | 0.0e+00 | 1493.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049397 | MS.gene66287 | 0.822244 | 2.63E-53 | -1.69E-46 |
| MS.gene049418 | MS.gene66287 | 0.821596 | 3.71E-53 | -1.69E-46 |
| MS.gene04985 | MS.gene66287 | 0.809388 | 1.94E-50 | -1.69E-46 |
| MS.gene049989 | MS.gene66287 | 0.883703 | 3.58E-71 | -1.69E-46 |
| MS.gene050297 | MS.gene66287 | 0.881232 | 2.85E-70 | -1.69E-46 |
| MS.gene050310 | MS.gene66287 | 0.812104 | 5.02E-51 | -1.69E-46 |
| MS.gene050648 | MS.gene66287 | 0.837755 | 4.31E-57 | -1.69E-46 |
| MS.gene051067 | MS.gene66287 | 0.804775 | 1.84E-49 | -1.69E-46 |
| MS.gene051094 | MS.gene66287 | 0.835284 | 1.84E-56 | -1.69E-46 |
| MS.gene051263 | MS.gene66287 | 0.840321 | 9.33E-58 | -1.69E-46 |
| MS.gene051478 | MS.gene66287 | 0.81131 | 7.46E-51 | -1.69E-46 |
| MS.gene051629 | MS.gene66287 | 0.843291 | 1.53E-58 | -1.69E-46 |
| MS.gene052367 | MS.gene66287 | 0.823242 | 1.54E-53 | -1.69E-46 |
| MS.gene053416 | MS.gene66287 | 0.835479 | 1.64E-56 | -1.69E-46 |
| MS.gene053417 | MS.gene66287 | 0.83489 | 2.31E-56 | -1.69E-46 |
| MS.gene053929 | MS.gene66287 | 0.815015 | 1.15E-51 | -1.69E-46 |
| MS.gene055957 | MS.gene66287 | 0.846364 | 2.28E-59 | -1.69E-46 |
| MS.gene056041 | MS.gene66287 | 0.827512 | 1.50E-54 | -1.69E-46 |
| MS.gene056042 | MS.gene66287 | 0.831395 | 1.71E-55 | -1.69E-46 |
| MS.gene056169 | MS.gene66287 | 0.830462 | 2.90E-55 | -1.69E-46 |
| MS.gene056228 | MS.gene66287 | 0.850599 | 1.53E-60 | -1.69E-46 |
| MS.gene056526 | MS.gene66287 | 0.828117 | 1.07E-54 | -1.69E-46 |
| MS.gene057004 | MS.gene66287 | 0.80663 | 7.49E-50 | -1.69E-46 |
| MS.gene058196 | MS.gene66287 | 0.828833 | 7.22E-55 | -1.69E-46 |
| MS.gene058197 | MS.gene66287 | 0.859903 | 3.00E-63 | -1.69E-46 |
| MS.gene058198 | MS.gene66287 | 0.861361 | 1.08E-63 | -1.69E-46 |
| MS.gene059300 | MS.gene66287 | 0.887508 | 1.34E-72 | -1.69E-46 |
| MS.gene060473 | MS.gene66287 | 0.833734 | 4.50E-56 | -1.69E-46 |
| MS.gene060565 | MS.gene66287 | 0.838829 | 2.28E-57 | -1.69E-46 |
| MS.gene06057 | MS.gene66287 | 0.885145 | 1.05E-71 | -1.69E-46 |
| MS.gene061260 | MS.gene66287 | 0.822522 | 2.26E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66287.t1 | MTR_6g093150 | 95.074 | 812 | 38 | 2 | 1 | 812 | 1 | 810 | 0.0 | 1593 |
| MS.gene66287.t1 | MTR_6g093150 | 94.389 | 606 | 32 | 2 | 207 | 812 | 50 | 653 | 0.0 | 1177 |
| MS.gene66287.t1 | MTR_3g050060 | 25.685 | 876 | 529 | 19 | 12 | 787 | 27 | 880 | 1.16e-68 | 244 |
| MS.gene66287.t1 | MTR_3g050060 | 25.143 | 875 | 546 | 19 | 12 | 787 | 27 | 891 | 1.74e-67 | 241 |
| MS.gene66287.t1 | MTR_4g107110 | 36.268 | 284 | 176 | 1 | 7 | 290 | 1 | 279 | 1.24e-50 | 185 |
| MS.gene66287.t1 | MTR_4g107110 | 36.268 | 284 | 176 | 1 | 7 | 290 | 1 | 279 | 1.61e-49 | 185 |
| MS.gene66287.t1 | MTR_5g036950 | 26.950 | 564 | 348 | 13 | 13 | 556 | 22 | 541 | 4.12e-44 | 171 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66287.t1 | AT2G07170 | 41.963 | 815 | 437 | 16 | 11 | 812 | 25 | 816 | 0.0 | 567 |
| MS.gene66287.t1 | AT1G27210 | 30.669 | 538 | 325 | 12 | 12 | 548 | 34 | 524 | 4.35e-53 | 195 |
| MS.gene66287.t1 | AT4G27060 | 36.949 | 295 | 177 | 4 | 12 | 299 | 41 | 333 | 6.34e-49 | 186 |
| MS.gene66287.t1 | AT4G27060 | 21.978 | 364 | 227 | 12 | 494 | 812 | 504 | 855 | 3.52e-19 | 93.6 |
| MS.gene66287.t1 | AT1G50890 | 33.564 | 289 | 181 | 5 | 12 | 291 | 36 | 322 | 7.83e-45 | 174 |
| MS.gene66287.t1 | AT1G50890 | 24.731 | 279 | 193 | 7 | 501 | 772 | 503 | 771 | 9.69e-17 | 85.5 |
| MS.gene66287.t1 | AT1G59850 | 33.333 | 282 | 181 | 2 | 12 | 291 | 21 | 297 | 8.33e-37 | 145 |
| MS.gene66287.t1 | AT5G62580 | 32.056 | 287 | 181 | 5 | 14 | 290 | 7 | 289 | 8.91e-34 | 138 |
| MS.gene66287.t1 | AT5G62580 | 32.056 | 287 | 181 | 5 | 14 | 290 | 7 | 289 | 8.91e-34 | 138 |
Find 157 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCGTTCTTGTCATCTTTA+AGG | 0.084954 | 6.4:-63771826 | MS.gene66287:CDS |
| TTTAGGATCCTGCATCTTTA+TGG | 0.153457 | 6.4:+63770801 | None:intergenic |
| AAATTATCCTCTCTGACTTT+TGG | 0.155108 | 6.4:+63769914 | None:intergenic |
| TTGGCTCTGCCTCACAAATT+TGG | 0.181166 | 6.4:+63770126 | None:intergenic |
| CACAACATTGATGTGTAATT+TGG | 0.196160 | 6.4:+63770746 | None:intergenic |
| AACAACCGCAGCAACAATTT+TGG | 0.226264 | 6.4:+63772303 | None:intergenic |
| ATGGATAAACTTTCTATAAC+TGG | 0.262628 | 6.4:+63769653 | None:intergenic |
| TCCTGGGAGAAGCGACATTT+TGG | 0.275170 | 6.4:+63770107 | None:intergenic |
| GTTGAATAGGTGTATTATTC+AGG | 0.277892 | 6.4:-63771978 | MS.gene66287:CDS |
| GGTGAAAAGTAGTGAAAGTT+TGG | 0.278968 | 6.4:-63770023 | MS.gene66287:CDS |
| CAGGATGTGGGTTATGAATA+TGG | 0.288308 | 6.4:-63770979 | MS.gene66287:CDS |
| TTCGTTCTTGTCATCTTTAA+GGG | 0.289104 | 6.4:-63771825 | MS.gene66287:CDS |
| TTATCTCAAGAATCTTTAAA+AGG | 0.289916 | 6.4:-63770175 | MS.gene66287:CDS |
| TAAATATTGGAAAATGCTTC+CGG | 0.292412 | 6.4:-63771621 | MS.gene66287:CDS |
| ACAACATTGATGTGTAATTT+GGG | 0.297728 | 6.4:+63770747 | None:intergenic |
| TACTCTCAAACTCTTCATTA+TGG | 0.299131 | 6.4:+63771052 | None:intergenic |
| CTGCTGCAGCCATGGGATTA+TGG | 0.311128 | 6.4:+63769565 | None:intergenic |
| CACTTTAGCACCGTATCTTC+TGG | 0.313958 | 6.4:-63769606 | MS.gene66287:CDS |
| AACGGTTTGCTTCTCACATT+TGG | 0.314748 | 6.4:+63770859 | None:intergenic |
| AGATCTAAACTCTGCATATA+TGG | 0.315587 | 6.4:-63769732 | MS.gene66287:CDS |
| AACGTGCCAATCATCTCTTT+TGG | 0.320011 | 6.4:+63771113 | None:intergenic |
| ATTGAAAGAGCAATGCAATT+TGG | 0.320218 | 6.4:+63769114 | None:intergenic |
| CAATAAAATTACATCATATC+TGG | 0.334865 | 6.4:-63768999 | MS.gene66287:CDS |
| CCAACAAGAGCATCGAAAAT+AGG | 0.336403 | 6.4:+63772160 | None:intergenic |
| GAGAATTGTTTCGAGTTCTT+TGG | 0.336737 | 6.4:+63772474 | None:intergenic |
| CACGCGGAATCCTCCTGTTT+CGG | 0.343898 | 6.4:-63772077 | MS.gene66287:CDS |
| TGTGAGAAGCAAACCGTTAG+AGG | 0.344735 | 6.4:-63770854 | MS.gene66287:CDS |
| CTAGTTTCTGAAGATGGCTT+TGG | 0.352507 | 6.4:+63770070 | None:intergenic |
| CCAAGCCTACCATTCTTGAT+TGG | 0.357127 | 6.4:+63770215 | None:intergenic |
| ACTACCGAGCCTTCAGAAAC+TGG | 0.367334 | 6.4:-63771590 | MS.gene66287:CDS |
| AAACATGATGCATCAGTTAC+AGG | 0.369760 | 6.4:-63770659 | MS.gene66287:intron |
| TTCCACTACAGAATGTGTTC+TGG | 0.378816 | 6.4:+63771077 | None:intergenic |
| AGGATAATTTGAACTGCTTA+GGG | 0.382496 | 6.4:-63769901 | MS.gene66287:CDS |
| GAGGATAATTTGAACTGCTT+AGG | 0.390712 | 6.4:-63769902 | MS.gene66287:CDS |
| ACCATTTCTAGCATTGGTTC+TGG | 0.391155 | 6.4:+63769814 | None:intergenic |
| GATCGAGACACACACGATAT+CGG | 0.403024 | 6.4:-63772499 | MS.gene66287:CDS |
| TGCGTTGGGACAAATTGCTT+TGG | 0.405945 | 6.4:-63771855 | MS.gene66287:CDS |
| TTAGTACTAGTTTCTGAAGA+TGG | 0.408101 | 6.4:+63770064 | None:intergenic |
| TGGAGTGCATACGGAGATCC+TGG | 0.410874 | 6.4:+63770090 | None:intergenic |
| ATACCATACAAAACCGAAAC+AGG | 0.420721 | 6.4:+63772064 | None:intergenic |
| CCAGTAGTTTGTGTTACTCT+CGG | 0.422069 | 6.4:+63769784 | None:intergenic |
| CAAATGAAATGACTTGTATT+CGG | 0.426495 | 6.4:-63770714 | MS.gene66287:CDS |
| TTCAGATATTGAAATCAAAC+AGG | 0.427865 | 6.4:-63770683 | MS.gene66287:CDS |
| CACAATGCATTAAACAAAGT+TGG | 0.432006 | 6.4:-63772523 | MS.gene66287:CDS |
| TTGCTTCTCACATTTGGCTT+CGG | 0.433575 | 6.4:+63770865 | None:intergenic |
| AAATATTGGAAAATGCTTCC+GGG | 0.434596 | 6.4:-63771620 | MS.gene66287:CDS |
| GAGCCTAACATCTCTATGTC+TGG | 0.437595 | 6.4:+63771224 | None:intergenic |
| CTGCGTTGATTGAGTTGAAT+AGG | 0.437729 | 6.4:-63771991 | MS.gene66287:CDS |
| TATATGGAAGCTTTGTGTTC+CGG | 0.441349 | 6.4:-63769716 | MS.gene66287:CDS |
| ATTACTACTCAGCTTGTTGT+TGG | 0.446978 | 6.4:+63772567 | None:intergenic |
| CCTTCTCTAACAGAAGAATC+TGG | 0.448809 | 6.4:+63772265 | None:intergenic |
| TTCTTGATTGGATTGTAGAA+AGG | 0.451684 | 6.4:+63770227 | None:intergenic |
| GCTTTGAAATTAGCGAATCA+AGG | 0.460154 | 6.4:-63772217 | MS.gene66287:CDS |
| AGGAATGAGGAGATGGAATG+TGG | 0.463881 | 6.4:+63772439 | None:intergenic |
| AGGGTTTGAAAGATACGGAT+TGG | 0.465253 | 6.4:-63771901 | MS.gene66287:CDS |
| CAGTAGTTTGTGTTACTCTC+GGG | 0.467032 | 6.4:+63769785 | None:intergenic |
| TCCACTACAGAATGTGTTCT+GGG | 0.471821 | 6.4:+63771078 | None:intergenic |
| TAGAGAGGGTTTGAAAGATA+CGG | 0.472957 | 6.4:-63771906 | MS.gene66287:CDS |
| AAAGCGGCTTCTGTTGCGTT+GGG | 0.473923 | 6.4:-63771869 | MS.gene66287:CDS |
| GAGCAAAGGTAAACCTTTGA+AGG | 0.475464 | 6.4:+63771562 | None:intergenic |
| TCTTGATTGGATTGTAGAAA+GGG | 0.477546 | 6.4:+63770228 | None:intergenic |
| AACTTGCCTGCTGCAGCCAT+GGG | 0.477757 | 6.4:+63769558 | None:intergenic |
| GCAAGAGAGGAATGAGGAGA+TGG | 0.478087 | 6.4:+63772432 | None:intergenic |
| AGGACAACCATTTCTAGCAT+TGG | 0.479539 | 6.4:+63769808 | None:intergenic |
| GAAACTGGATCCTCCTTCAA+AGG | 0.479927 | 6.4:-63771575 | MS.gene66287:intron |
| GAAACTAGTACTAAGCAATC+AGG | 0.487912 | 6.4:-63770055 | MS.gene66287:CDS |
| CATTGTTTACAAAGCAGTCA+TGG | 0.488796 | 6.4:+63770893 | None:intergenic |
| ACATCAATGTTGTGTACAAA+GGG | 0.488994 | 6.4:-63770737 | MS.gene66287:CDS |
| GAACTTGCCTGCTGCAGCCA+TGG | 0.490305 | 6.4:+63769557 | None:intergenic |
| ACTTAATATGAAATCAACTA+CGG | 0.491293 | 6.4:-63771196 | MS.gene66287:CDS |
| AGTCCAGACATAGAGATGTT+AGG | 0.496261 | 6.4:-63771227 | MS.gene66287:CDS |
| CCAATCAAGAATGGTAGGCT+TGG | 0.497219 | 6.4:-63770215 | MS.gene66287:CDS |
| TAAAGCGGCTTCTGTTGCGT+TGG | 0.497925 | 6.4:-63771870 | MS.gene66287:CDS |
| TAAACTTTCTATAACTGGAC+CGG | 0.499508 | 6.4:+63769658 | None:intergenic |
| GCCAAAATGTCGCTTCTCCC+AGG | 0.502514 | 6.4:-63770108 | MS.gene66287:CDS |
| GTCATCCCAAAAGAGATGAT+TGG | 0.502641 | 6.4:-63771119 | MS.gene66287:CDS |
| CATAATCCCATGGCTGCAGC+AGG | 0.504288 | 6.4:-63769564 | MS.gene66287:intron |
| AAAGCATGTCAAAATGATGT+TGG | 0.506304 | 6.4:-63771150 | MS.gene66287:CDS |
| TCTGCTCAAGTGAGAAAGAA+TGG | 0.511359 | 6.4:-63769857 | MS.gene66287:CDS |
| CCGAGAGTAACACAAACTAC+TGG | 0.513150 | 6.4:-63769784 | MS.gene66287:CDS |
| GTTGAGCTTCTGAATAAAAC+CGG | 0.517186 | 6.4:-63769677 | MS.gene66287:CDS |
| ACTCATTGTTTGTAGCGGCT+TGG | 0.517709 | 6.4:+63771020 | None:intergenic |
| TGTAAAACCGCATCCCTCAC+TGG | 0.518045 | 6.4:+63771650 | None:intergenic |
| GCCAGAACCAATGCTAGAAA+TGG | 0.519664 | 6.4:-63769815 | MS.gene66287:CDS |
| CAACTTATTACTTCCTCTAA+CGG | 0.520424 | 6.4:+63770841 | None:intergenic |
| CCAGATTCTTCTGTTAGAGA+AGG | 0.522317 | 6.4:-63772265 | MS.gene66287:CDS |
| CACATCAATGTTGTGTACAA+AGG | 0.523686 | 6.4:-63770738 | MS.gene66287:CDS |
| AATAGGTGTATTATTCAGGC+TGG | 0.528873 | 6.4:-63771974 | MS.gene66287:CDS |
| TTCTACAATCCAATCAAGAA+TGG | 0.529982 | 6.4:-63770224 | MS.gene66287:CDS |
| TGTTACAAGCATGCAGGATG+TGG | 0.535835 | 6.4:-63770992 | MS.gene66287:CDS |
| AATGTACTCCATAAAGATGC+AGG | 0.536807 | 6.4:-63770809 | MS.gene66287:CDS |
| AAGGAGGATCCAGTTTCTGA+AGG | 0.539883 | 6.4:+63771581 | None:intergenic |
| TGTAATTTGGGGACTTGACT+CGG | 0.540972 | 6.4:+63770759 | None:intergenic |
| CTCCAGCATGAATCCTCGGT+TGG | 0.542014 | 6.4:+63769978 | None:intergenic |
| TGGGCCTATGGATGACAAGC+AGG | 0.545178 | 6.4:-63770959 | MS.gene66287:CDS |
| AACATCTCTATGTCTGGACT+CGG | 0.546866 | 6.4:+63771230 | None:intergenic |
| CATGACTGCTTTGTAAACAA+TGG | 0.547183 | 6.4:-63770892 | MS.gene66287:CDS |
| AGATGGCTTTGGAGTGCATA+CGG | 0.548202 | 6.4:+63770081 | None:intergenic |
| GGGTTATGAATATGGGCCTA+TGG | 0.549080 | 6.4:-63770971 | MS.gene66287:CDS |
| GAATCAAGGTAATGAAGATA+AGG | 0.552496 | 6.4:-63772203 | MS.gene66287:CDS |
| ATTGTTTACAAAGCAGTCAT+GGG | 0.553394 | 6.4:+63770894 | None:intergenic |
| CTTAATATGAAATCAACTAC+GGG | 0.555405 | 6.4:-63771195 | MS.gene66287:CDS |
| CTATCTCCAGCATGAATCCT+CGG | 0.562259 | 6.4:+63769974 | None:intergenic |
| TCTCAAGAATCTTTAAAAGG+AGG | 0.564666 | 6.4:-63770172 | MS.gene66287:CDS |
| AGCATTGGTTCTGGCAGCAG+AGG | 0.565867 | 6.4:+63769823 | None:intergenic |
| CAGAAAACTCCAAATTTGTG+AGG | 0.569734 | 6.4:-63770135 | MS.gene66287:CDS |
| ACAATCCAATCAAGAATGGT+AGG | 0.573841 | 6.4:-63770220 | MS.gene66287:CDS |
| GCAGGTTTCGCCATAAAATG+TGG | 0.574624 | 6.4:+63772010 | None:intergenic |
| AGGATGTGGGTTATGAATAT+GGG | 0.575148 | 6.4:-63770978 | MS.gene66287:CDS |
| GGCTGTTGGTAGTATTAGAG+AGG | 0.583720 | 6.4:-63771921 | MS.gene66287:CDS |
| AGCCAACCGAGGATTCATGC+TGG | 0.584954 | 6.4:-63769980 | MS.gene66287:CDS |
| TGATTCCTCGAGGTTTGACA+AGG | 0.586369 | 6.4:-63771783 | MS.gene66287:intron |
| GGATCCAGTTTCTGAAGGCT+CGG | 0.586766 | 6.4:+63771586 | None:intergenic |
| AGGTTGTATTGAAATGTTCG+CGG | 0.587532 | 6.4:-63772245 | MS.gene66287:CDS |
| TTCATTCTCTTGATTCCTCG+AGG | 0.588058 | 6.4:-63771793 | MS.gene66287:CDS |
| AGGTGTATTATTCAGGCTGG+TGG | 0.594436 | 6.4:-63771971 | MS.gene66287:CDS |
| GAGAATGCAAGAGAGGAATG+AGG | 0.599531 | 6.4:+63772426 | None:intergenic |
| TCAAGACTCATTGTTTGTAG+CGG | 0.603027 | 6.4:+63771015 | None:intergenic |
| ATCTCTATGTCTGGACTCGG+TGG | 0.603533 | 6.4:+63771233 | None:intergenic |
| AACGAGAATAAGTTCGTCAC+CGG | 0.604731 | 6.4:+63769697 | None:intergenic |
| GGAGTGCATACGGAGATCCT+GGG | 0.608022 | 6.4:+63770091 | None:intergenic |
| CCCCAGAACACATTCTGTAG+TGG | 0.608984 | 6.4:-63771079 | MS.gene66287:CDS |
| CAACATTGATGTGTAATTTG+GGG | 0.611777 | 6.4:+63770748 | None:intergenic |
| AATGCAATTTGGTCCGTGGA+CGG | 0.613979 | 6.4:+63769125 | None:intergenic |
| TTAGCACCGTATCTTCTGGA+AGG | 0.614062 | 6.4:-63769602 | MS.gene66287:CDS |
| GGTGAAACCAGTGAGGGATG+CGG | 0.615202 | 6.4:-63771657 | MS.gene66287:CDS |
| GGATAATTTGAACTGCTTAG+GGG | 0.616156 | 6.4:-63769900 | MS.gene66287:CDS |
| GATTCATGCTGGAGATAGTG+TGG | 0.617649 | 6.4:-63769969 | MS.gene66287:CDS |
| TAATTTGAACTGCTTAGGGG+AGG | 0.618224 | 6.4:-63769897 | MS.gene66287:CDS |
| GTTGAAATGAGCACCGTCCA+CGG | 0.618871 | 6.4:-63769138 | MS.gene66287:CDS |
| GAGCAATGCAATTTGGTCCG+TGG | 0.621953 | 6.4:+63769121 | None:intergenic |
| TCTCACCAAAATTGTTGCTG+CGG | 0.626501 | 6.4:-63772308 | MS.gene66287:CDS |
| GGATATGTGTAAAAGTTACA+AGG | 0.626865 | 6.4:-63769948 | MS.gene66287:CDS |
| ATATGAAATCAACTACGGGA+AGG | 0.627700 | 6.4:-63771191 | MS.gene66287:CDS |
| GCTGTTGGTAGTATTAGAGA+GGG | 0.629368 | 6.4:-63771920 | MS.gene66287:CDS |
| GAATGTCGAGAATGCAAGAG+AGG | 0.629620 | 6.4:+63772419 | None:intergenic |
| GGCTCGGTAGTATAATGACC+CGG | 0.630775 | 6.4:+63771602 | None:intergenic |
| CACTCCTGCTTGTCATCCAT+AGG | 0.633163 | 6.4:+63770955 | None:intergenic |
| TGGAATGTGGAGTTAATGAG+TGG | 0.637506 | 6.4:+63772452 | None:intergenic |
| TCTTGATGTTACAAGCATGC+AGG | 0.641520 | 6.4:-63770998 | MS.gene66287:CDS |
| TAGTTTGTGTTACTCTCGGG+AGG | 0.642716 | 6.4:+63769788 | None:intergenic |
| GGATTGGAAAACACGTAAAG+CGG | 0.647564 | 6.4:-63771885 | MS.gene66287:CDS |
| TATAAGAGATTCATAAACAG+TGG | 0.652703 | 6.4:+63772339 | None:intergenic |
| ATTATAGGTGAAACCAGTGA+GGG | 0.652743 | 6.4:-63771663 | MS.gene66287:intron |
| CAAAGGTAAACCTTTGAAGG+AGG | 0.653235 | 6.4:+63771565 | None:intergenic |
| CTGGTATTGTACAAAACACG+CGG | 0.655159 | 6.4:-63772093 | MS.gene66287:CDS |
| CTATTCAACTCAATCAACGC+AGG | 0.655568 | 6.4:+63771992 | None:intergenic |
| TCTACAGAAAATATCTGCGG+AGG | 0.664334 | 6.4:-63771288 | MS.gene66287:intron |
| CCATACAAAACCGAAACAGG+AGG | 0.673672 | 6.4:+63772067 | None:intergenic |
| GTTACAAGCATGCAGGATGT+GGG | 0.676382 | 6.4:-63770991 | MS.gene66287:CDS |
| TATCTGCGGAGGTGACTCTG+TGG | 0.685008 | 6.4:-63771277 | MS.gene66287:CDS |
| CTTTCTACAGAAAATATCTG+CGG | 0.688105 | 6.4:-63771291 | MS.gene66287:intron |
| GACTGCCCCAAAAGTCAGAG+AGG | 0.694271 | 6.4:-63769921 | MS.gene66287:CDS |
| GATTATAGGTGAAACCAGTG+AGG | 0.696142 | 6.4:-63771664 | MS.gene66287:intron |
| CCACTACAGAATGTGTTCTG+GGG | 0.711381 | 6.4:+63771079 | None:intergenic |
| GTGAATCGTCTTGTATGTGA+AGG | 0.716670 | 6.4:-63769755 | MS.gene66287:CDS |
| AATCACCTTGTCAAACCTCG+AGG | 0.724129 | 6.4:+63771778 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGAAAAATAACTAATTA+AGG | - | chr6.4:63772094-63772113 | MS.gene66287:CDS | 10.0% |
| !! | ATATATTAATAATCGATTAT+AGG | - | chr6.4:63769894-63769913 | MS.gene66287:CDS | 10.0% |
| !! | TACACTTATAATTTAGTTAA+CGG | + | chr6.4:63769875-63769894 | None:intergenic | 15.0% |
| !!! | AATATGAATATTGTAACTTT+TGG | - | chr6.4:63771191-63771210 | MS.gene66287:CDS | 15.0% |
| !!! | TAATTTTTATTTTCTTCTGA+TGG | - | chr6.4:63772216-63772235 | MS.gene66287:CDS | 15.0% |
| !!! | TTGATTTCATATTAAGTTTT+TGG | + | chr6.4:63770373-63770392 | None:intergenic | 15.0% |
| !! | ACTTAATATGAAATCAACTA+CGG | - | chr6.4:63770376-63770395 | MS.gene66287:intron | 20.0% |
| !! | AGGATATATATAAAGACATT+TGG | - | chr6.4:63770083-63770102 | MS.gene66287:CDS | 20.0% |
| !! | CAATAAAATTACATCATATC+TGG | - | chr6.4:63772573-63772592 | MS.gene66287:CDS | 20.0% |
| !! | GATATCAAAATTCAAAAAGA+GGG | + | chr6.4:63770041-63770060 | None:intergenic | 20.0% |
| !! | TGATATCAAAATTCAAAAAG+AGG | + | chr6.4:63770042-63770061 | None:intergenic | 20.0% |
| !! | TTATCTCAAGAATCTTTAAA+AGG | - | chr6.4:63771397-63771416 | MS.gene66287:intron | 20.0% |
| !! | TTTGATATCAATATTGCTAT+TGG | - | chr6.4:63770052-63770071 | MS.gene66287:CDS | 20.0% |
| !!! | TTTTACAAGCTCTTAAATAT+TGG | - | chr6.4:63769938-63769957 | MS.gene66287:CDS | 20.0% |
| ! | AAACAAGAACACTATCTAAT+TGG | + | chr6.4:63770123-63770142 | None:intergenic | 25.0% |
| ! | AACAAGAACACTATCTAATT+GGG | + | chr6.4:63770122-63770141 | None:intergenic | 25.0% |
| ! | ACAACATTGATGTGTAATTT+GGG | + | chr6.4:63770828-63770847 | None:intergenic | 25.0% |
| ! | ATAAATGAGCTACTGTATAT+CGG | + | chr6.4:63771014-63771033 | None:intergenic | 25.0% |
| ! | ATGGATAAACTTTCTATAAC+TGG | + | chr6.4:63771922-63771941 | None:intergenic | 25.0% |
| ! | CTTAATATGAAATCAACTAC+GGG | - | chr6.4:63770377-63770396 | MS.gene66287:intron | 25.0% |
| ! | GTTAAACAATTTAATAACCC+AGG | + | chr6.4:63772310-63772329 | None:intergenic | 25.0% |
| ! | TAAATATTGGAAAATGCTTC+CGG | - | chr6.4:63769951-63769970 | MS.gene66287:CDS | 25.0% |
| ! | TATAAGAGATTCATAAACAG+TGG | + | chr6.4:63769236-63769255 | None:intergenic | 25.0% |
| ! | TGATTGCTAATCTTATACAT+TGG | - | chr6.4:63770230-63770249 | MS.gene66287:CDS | 25.0% |
| ! | TTCAGATATTGAAATCAAAC+AGG | - | chr6.4:63770889-63770908 | MS.gene66287:CDS | 25.0% |
| !! | AATGCTTTGAATACCATTTA+AGG | + | chr6.4:63772157-63772176 | None:intergenic | 25.0% |
| !! | ATATCAATATTGCTATTGGT+TGG | - | chr6.4:63770056-63770075 | MS.gene66287:CDS | 25.0% |
| !! | CAAATGAAATGACTTGTATT+CGG | - | chr6.4:63770858-63770877 | MS.gene66287:CDS | 25.0% |
| !! | TGGAAAAAAGATCATTTTCA+AGG | - | chr6.4:63771569-63771588 | MS.gene66287:intron | 25.0% |
| !! | TTTGAGAGATTGTTTTCTAA+TGG | + | chr6.4:63769197-63769216 | None:intergenic | 25.0% |
| !!! | AAATTTGGAGTTTTCTGAAA+AGG | + | chr6.4:63771434-63771453 | None:intergenic | 25.0% |
| !!! | ATCATTGATAATGCAAATGT+AGG | - | chr6.4:63772331-63772350 | MS.gene66287:CDS | 25.0% |
| !!! | ATGTTAGTCTTTCTTGTTTT+AGG | - | chr6.4:63772409-63772428 | MS.gene66287:CDS | 25.0% |
| !!! | CTTTTTCAGATTTTTACAAC+TGG | - | chr6.4:63771310-63771329 | MS.gene66287:intron | 25.0% |
| !!! | TTTTGTATGGTATGTTGATT+AGG | - | chr6.4:63769518-63769537 | MS.gene66287:intron | 25.0% |
| AAAGCATGTCAAAATGATGT+TGG | - | chr6.4:63770422-63770441 | MS.gene66287:intron | 30.0% | |
| AAATAACTGATATACTTCCC+AGG | + | chr6.4:63772389-63772408 | None:intergenic | 30.0% | |
| AAATATTGGAAAATGCTTCC+GGG | - | chr6.4:63769952-63769971 | MS.gene66287:CDS | 30.0% | |
| ACATCAATGTTGTGTACAAA+GGG | - | chr6.4:63770835-63770854 | MS.gene66287:CDS | 30.0% | |
| AGATCTAAACTCTGCATATA+TGG | - | chr6.4:63771840-63771859 | MS.gene66287:CDS | 30.0% | |
| AGGATAATTTGAACTGCTTA+GGG | - | chr6.4:63771671-63771690 | MS.gene66287:intron | 30.0% | |
| ATTGAAAGAGCAATGCAATT+TGG | + | chr6.4:63772461-63772480 | None:intergenic | 30.0% | |
| ATTGTTTACAAAGCAGTCAT+GGG | + | chr6.4:63770681-63770700 | None:intergenic | 30.0% | |
| CAACATTGATGTGTAATTTG+GGG | + | chr6.4:63770827-63770846 | None:intergenic | 30.0% | |
| CAACTTATTACTTCCTCTAA+CGG | + | chr6.4:63770734-63770753 | None:intergenic | 30.0% | |
| CACAACATTGATGTGTAATT+TGG | + | chr6.4:63770829-63770848 | None:intergenic | 30.0% | |
| CACAATGCATTAAACAAAGT+TGG | - | chr6.4:63769049-63769068 | MS.gene66287:CDS | 30.0% | |
| CTTTCTACAGAAAATATCTG+CGG | - | chr6.4:63770281-63770300 | MS.gene66287:intron | 30.0% | |
| GAATCAAGGTAATGAAGATA+AGG | - | chr6.4:63769369-63769388 | MS.gene66287:intron | 30.0% | |
| GGATATGTGTAAAAGTTACA+AGG | - | chr6.4:63771624-63771643 | MS.gene66287:CDS | 30.0% | |
| GTTGAATAGGTGTATTATTC+AGG | - | chr6.4:63769594-63769613 | MS.gene66287:CDS | 30.0% | |
| TAAACTTTCTATAACTGGAC+CGG | + | chr6.4:63771917-63771936 | None:intergenic | 30.0% | |
| TACTCTCAAACTCTTCATTA+TGG | + | chr6.4:63770523-63770542 | None:intergenic | 30.0% | |
| TCTTGATTGGATTGTAGAAA+GGG | + | chr6.4:63771347-63771366 | None:intergenic | 30.0% | |
| TTCGTTCTTGTCATCTTTAA+GGG | - | chr6.4:63769747-63769766 | MS.gene66287:CDS | 30.0% | |
| TTCTACAATCCAATCAAGAA+TGG | - | chr6.4:63771348-63771367 | MS.gene66287:intron | 30.0% | |
| TTCTTGATTGGATTGTAGAA+AGG | + | chr6.4:63771348-63771367 | None:intergenic | 30.0% | |
| ! | AAATTATCCTCTCTGACTTT+TGG | + | chr6.4:63771661-63771680 | None:intergenic | 30.0% |
| ! | AAGAACATTGACAGTTTTCA+TGG | + | chr6.4:63771941-63771960 | None:intergenic | 30.0% |
| ! | AATTATCCTCTCTGACTTTT+GGG | + | chr6.4:63771660-63771679 | None:intergenic | 30.0% |
| ! | AGAGATTGTTTTCTAATGGA+AGG | + | chr6.4:63769193-63769212 | None:intergenic | 30.0% |
| ! | ATTGTATTTTTCACATGGCA+TGG | + | chr6.4:63772255-63772274 | None:intergenic | 30.0% |
| ! | ATTTGAAGTAATGTCCGAAA+TGG | - | chr6.4:63771233-63771252 | MS.gene66287:CDS | 30.0% |
| ! | ATTTTTCCTTCCAGAAGATA+CGG | + | chr6.4:63771979-63771998 | None:intergenic | 30.0% |
| ! | GATTTTTACAACTGGCATAA+TGG | - | chr6.4:63771318-63771337 | MS.gene66287:intron | 30.0% |
| ! | GCTTAAGAATCCACATTTTA+TGG | - | chr6.4:63769552-63769571 | MS.gene66287:intron | 30.0% |
| ! | GCTTTTATATGCAATTCAAG+AGG | - | chr6.4:63772496-63772515 | MS.gene66287:CDS | 30.0% |
| ! | TATTGCTATTGGTTGGAATA+AGG | - | chr6.4:63770063-63770082 | MS.gene66287:CDS | 30.0% |
| ! | TCTCAAGAATCTTTAAAAGG+AGG | - | chr6.4:63771400-63771419 | MS.gene66287:intron | 30.0% |
| ! | TGCACATTGTATTTTTCACA+TGG | + | chr6.4:63772260-63772279 | None:intergenic | 30.0% |
| ! | TGCGGTTGTTAAATGTTTTA+GGG | - | chr6.4:63769282-63769301 | MS.gene66287:intron | 30.0% |
| ! | TTAGTACTAGTTTCTGAAGA+TGG | + | chr6.4:63771511-63771530 | None:intergenic | 30.0% |
| ! | TTTTCAATACCATAATCCCA+TGG | - | chr6.4:63771998-63772017 | MS.gene66287:CDS | 30.0% |
| !!! | TCTAATGGAAGGTTTTAGTT+CGG | + | chr6.4:63769182-63769201 | None:intergenic | 30.0% |
| AAACATGATGCATCAGTTAC+AGG | - | chr6.4:63770913-63770932 | MS.gene66287:CDS | 35.0% | |
| AATAGGTGTATTATTCAGGC+TGG | - | chr6.4:63769598-63769617 | MS.gene66287:CDS | 35.0% | |
| AATATATACCACATACCGTG+TGG | + | chr6.4:63771270-63771289 | None:intergenic | 35.0% | |
| AATGTACTCCATAAAGATGC+AGG | - | chr6.4:63770763-63770782 | MS.gene66287:CDS | 35.0% | |
| ACAATCCAATCAAGAATGGT+AGG | - | chr6.4:63771352-63771371 | MS.gene66287:intron | 35.0% | |
| AGGTTGTATTGAAATGTTCG+CGG | - | chr6.4:63769327-63769346 | MS.gene66287:intron | 35.0% | |
| ATACCATACAAAACCGAAAC+AGG | + | chr6.4:63769511-63769530 | None:intergenic | 35.0% | |
| ATATGAAATCAACTACGGGA+AGG | - | chr6.4:63770381-63770400 | MS.gene66287:intron | 35.0% | |
| ATTATAGGTGAAACCAGTGA+GGG | - | chr6.4:63769909-63769928 | MS.gene66287:CDS | 35.0% | |
| CACATCAATGTTGTGTACAA+AGG | - | chr6.4:63770834-63770853 | MS.gene66287:CDS | 35.0% | |
| CAGAAAACTCCAAATTTGTG+AGG | - | chr6.4:63771437-63771456 | MS.gene66287:intron | 35.0% | |
| CATGACTGCTTTGTAAACAA+TGG | - | chr6.4:63770680-63770699 | MS.gene66287:CDS | 35.0% | |
| CATTGTTTACAAAGCAGTCA+TGG | + | chr6.4:63770682-63770701 | None:intergenic | 35.0% | |
| CTTCGTTCTTGTCATCTTTA+AGG | - | chr6.4:63769746-63769765 | MS.gene66287:CDS | 35.0% | |
| GAAACTAGTACTAAGCAATC+AGG | - | chr6.4:63771517-63771536 | MS.gene66287:intron | 35.0% | |
| GAGGATAATTTGAACTGCTT+AGG | - | chr6.4:63771670-63771689 | MS.gene66287:intron | 35.0% | |
| GATATACTTCCCAGGTTATT+CGG | + | chr6.4:63772381-63772400 | None:intergenic | 35.0% | |
| GGATAATTTGAACTGCTTAG+GGG | - | chr6.4:63771672-63771691 | MS.gene66287:intron | 35.0% | |
| GGTGAAAAGTAGTGAAAGTT+TGG | - | chr6.4:63771549-63771568 | MS.gene66287:intron | 35.0% | |
| GTTGAGCTTCTGAATAAAAC+CGG | - | chr6.4:63771895-63771914 | MS.gene66287:CDS | 35.0% | |
| TAGAGAGGGTTTGAAAGATA+CGG | - | chr6.4:63769666-63769685 | MS.gene66287:CDS | 35.0% | |
| TCAAGACTCATTGTTTGTAG+CGG | + | chr6.4:63770560-63770579 | None:intergenic | 35.0% | |
| TGGTGTAACAAGAACCATTT+CGG | + | chr6.4:63771250-63771269 | None:intergenic | 35.0% | |
| ! | ACATTTTTGTTGCATCTTCG+TGG | - | chr6.4:63772127-63772146 | MS.gene66287:CDS | 35.0% |
| ! | ACTGTCGAATCAGAACTTTT+AGG | + | chr6.4:63770791-63770810 | None:intergenic | 35.0% |
| ! | AGGATGTGGGTTATGAATAT+GGG | - | chr6.4:63770594-63770613 | MS.gene66287:intron | 35.0% |
| ! | ATTATCCTCTCTGACTTTTG+GGG | + | chr6.4:63771659-63771678 | None:intergenic | 35.0% |
| ! | CATGCTTTTCTTACAGACAA+AGG | + | chr6.4:63770410-63770429 | None:intergenic | 35.0% |
| ! | CATGTAGTGGAAAGTAAACA+AGG | + | chr6.4:63771050-63771069 | None:intergenic | 35.0% |
| ! | CTGCGGTTGTTAAATGTTTT+AGG | - | chr6.4:63769281-63769300 | MS.gene66287:intron | 35.0% |
| ! | TATATGGAAGCTTTGTGTTC+CGG | - | chr6.4:63771856-63771875 | MS.gene66287:CDS | 35.0% |
| ! | TTTAGGATCCTGCATCTTTA+TGG | + | chr6.4:63770774-63770793 | None:intergenic | 35.0% |
| !! | ATTACTACTCAGCTTGTTGT+TGG | + | chr6.4:63769008-63769027 | None:intergenic | 35.0% |
| !! | CAACAATTTTGGTGAGATGT+GGG | + | chr6.4:63769261-63769280 | None:intergenic | 35.0% |
| !! | GAGAATTGTTTCGAGTTCTT+TGG | + | chr6.4:63769101-63769120 | None:intergenic | 35.0% |
| !! | GCTTTGAAATTAGCGAATCA+AGG | - | chr6.4:63769355-63769374 | MS.gene66287:intron | 35.0% |
| !! | TAAGCAATCAGGCTTGTTTT+CGG | - | chr6.4:63771528-63771547 | MS.gene66287:intron | 35.0% |
| AAAAGAGGGAGAAAGAGCAA+AGG | + | chr6.4:63770027-63770046 | None:intergenic | 40.0% | |
| AACATCTCTATGTCTGGACT+CGG | + | chr6.4:63770345-63770364 | None:intergenic | 40.0% | |
| AACGAGAATAAGTTCGTCAC+CGG | + | chr6.4:63771878-63771897 | None:intergenic | 40.0% | |
| ACAAGGTGATTTCTCACTCT+CGG | - | chr6.4:63769806-63769825 | MS.gene66287:CDS | 40.0% | |
| AGGGTTTGAAAGATACGGAT+TGG | - | chr6.4:63769671-63769690 | MS.gene66287:CDS | 40.0% | |
| AGTCCAGACATAGAGATGTT+AGG | - | chr6.4:63770345-63770364 | MS.gene66287:intron | 40.0% | |
| ATGGTTCTTGTTACACCACA+CGG | - | chr6.4:63771252-63771271 | MS.gene66287:CDS | 40.0% | |
| CCAGATTCTTCTGTTAGAGA+AGG | - | chr6.4:63769307-63769326 | MS.gene66287:intron | 40.0% | |
| CCTTCTCTAACAGAAGAATC+TGG | + | chr6.4:63769310-63769329 | None:intergenic | 40.0% | |
| CTATTCAACTCAATCAACGC+AGG | + | chr6.4:63769583-63769602 | None:intergenic | 40.0% | |
| CTGGTATTGTACAAAACACG+CGG | - | chr6.4:63769479-63769498 | MS.gene66287:intron | 40.0% | |
| GAGCAAAGGTAAACCTTTGA+AGG | + | chr6.4:63770013-63770032 | None:intergenic | 40.0% | |
| GATTATAGGTGAAACCAGTG+AGG | - | chr6.4:63769908-63769927 | MS.gene66287:CDS | 40.0% | |
| GGATTGGAAAACACGTAAAG+CGG | - | chr6.4:63769687-63769706 | MS.gene66287:CDS | 40.0% | |
| GTCATCCCAAAAGAGATGAT+TGG | - | chr6.4:63770453-63770472 | MS.gene66287:intron | 40.0% | |
| GTGAATCGTCTTGTATGTGA+AGG | - | chr6.4:63771817-63771836 | MS.gene66287:CDS | 40.0% | |
| TAATTTGAACTGCTTAGGGG+AGG | - | chr6.4:63771675-63771694 | MS.gene66287:intron | 40.0% | |
| TCCACTACAGAATGTGTTCT+GGG | + | chr6.4:63770497-63770516 | None:intergenic | 40.0% | |
| TCTACAGAAAATATCTGCGG+AGG | - | chr6.4:63770284-63770303 | MS.gene66287:intron | 40.0% | |
| TCTCACCAAAATTGTTGCTG+CGG | - | chr6.4:63769264-63769283 | MS.gene66287:intron | 40.0% | |
| TCTGCTCAAGTGAGAAAGAA+TGG | - | chr6.4:63771715-63771734 | MS.gene66287:intron | 40.0% | |
| TCTTCGTGGCATACCTTAAA+TGG | - | chr6.4:63772141-63772160 | MS.gene66287:CDS | 40.0% | |
| TCTTGATGTTACAAGCATGC+AGG | - | chr6.4:63770574-63770593 | MS.gene66287:intron | 40.0% | |
| TGGAATGTGGAGTTAATGAG+TGG | + | chr6.4:63769123-63769142 | None:intergenic | 40.0% | |
| TGTAATTTGGGGACTTGACT+CGG | + | chr6.4:63770816-63770835 | None:intergenic | 40.0% | |
| TTCATTCTCTTGATTCCTCG+AGG | - | chr6.4:63769779-63769798 | MS.gene66287:CDS | 40.0% | |
| TTCCACTACAGAATGTGTTC+TGG | + | chr6.4:63770498-63770517 | None:intergenic | 40.0% | |
| TTTAATAACCCAGGCCTGTT+TGG | + | chr6.4:63772301-63772320 | None:intergenic | 40.0% | |
| ! | AACAACCGCAGCAACAATTT+TGG | + | chr6.4:63769272-63769291 | None:intergenic | 40.0% |
| ! | AACGGTTTGCTTCTCACATT+TGG | + | chr6.4:63770716-63770735 | None:intergenic | 40.0% |
| ! | AACGTGCCAATCATCTCTTT+TGG | + | chr6.4:63770462-63770481 | None:intergenic | 40.0% |
| ! | ACGTGCCAATCATCTCTTTT+GGG | + | chr6.4:63770461-63770480 | None:intergenic | 40.0% |
| ! | CAAAGGTAAACCTTTGAAGG+AGG | + | chr6.4:63770010-63770029 | None:intergenic | 40.0% |
| ! | CAGGATGTGGGTTATGAATA+TGG | - | chr6.4:63770593-63770612 | MS.gene66287:intron | 40.0% |
| ! | CAGTAGTTTGTGTTACTCTC+GGG | + | chr6.4:63771790-63771809 | None:intergenic | 40.0% |
| ! | CCAGTAGTTTGTGTTACTCT+CGG | + | chr6.4:63771791-63771810 | None:intergenic | 40.0% |
| ! | CCTATTTTCGATGCTCTTGT+TGG | - | chr6.4:63769412-63769431 | MS.gene66287:intron | 40.0% |
| ! | CTAGTTTCTGAAGATGGCTT+TGG | + | chr6.4:63771505-63771524 | None:intergenic | 40.0% |
| ! | CTTGAAGCGTTATCATGTAG+TGG | + | chr6.4:63771063-63771082 | None:intergenic | 40.0% |
| ! | TTGCTTCTCACATTTGGCTT+CGG | + | chr6.4:63770710-63770729 | None:intergenic | 40.0% |
| ! | TTTTCAGCCATGCAGAAAAG+AGG | - | chr6.4:63772534-63772553 | MS.gene66287:CDS | 40.0% |
| !! | ACCATTTCTAGCATTGGTTC+TGG | + | chr6.4:63771761-63771780 | None:intergenic | 40.0% |
| !! | AGGACAACCATTTCTAGCAT+TGG | + | chr6.4:63771767-63771786 | None:intergenic | 40.0% |
| !! | ATCGCTTTTACCGAATAACC+TGG | - | chr6.4:63772368-63772387 | MS.gene66287:CDS | 40.0% |
| !! | CCAACAAGAGCATCGAAAAT+AGG | + | chr6.4:63769415-63769434 | None:intergenic | 40.0% |
| !! | CTGCGTTGATTGAGTTGAAT+AGG | - | chr6.4:63769581-63769600 | MS.gene66287:CDS | 40.0% |
| !! | GCAACAATTTTGGTGAGATG+TGG | + | chr6.4:63769262-63769281 | None:intergenic | 40.0% |
| !! | GCTGTTGGTAGTATTAGAGA+GGG | - | chr6.4:63769652-63769671 | MS.gene66287:CDS | 40.0% |
| !! | TCGCTTTTACCGAATAACCT+GGG | - | chr6.4:63772369-63772388 | MS.gene66287:CDS | 40.0% |
| AAGGAGGATCCAGTTTCTGA+AGG | + | chr6.4:63769994-63770013 | None:intergenic | 45.0% | |
| AATCACCTTGTCAAACCTCG+AGG | + | chr6.4:63769797-63769816 | None:intergenic | 45.0% | |
| AATGCAATTTGGTCCGTGGA+CGG | + | chr6.4:63772450-63772469 | None:intergenic | 45.0% | |
| ACTCATTGTTTGTAGCGGCT+TGG | + | chr6.4:63770555-63770574 | None:intergenic | 45.0% | |
| AGGAATGAGGAGATGGAATG+TGG | + | chr6.4:63769136-63769155 | None:intergenic | 45.0% | |
| AGGTGTATTATTCAGGCTGG+TGG | - | chr6.4:63769601-63769620 | MS.gene66287:CDS | 45.0% | |
| CACTTTAGCACCGTATCTTC+TGG | - | chr6.4:63771966-63771985 | MS.gene66287:CDS | 45.0% | |
| CCAAGCCTACCATTCTTGAT+TGG | + | chr6.4:63771360-63771379 | None:intergenic | 45.0% | |
| CCAATCAAGAATGGTAGGCT+TGG | - | chr6.4:63771357-63771376 | MS.gene66287:intron | 45.0% | |
| CCACTACAGAATGTGTTCTG+GGG | + | chr6.4:63770496-63770515 | None:intergenic | 45.0% | |
| CCATACAAAACCGAAACAGG+AGG | + | chr6.4:63769508-63769527 | None:intergenic | 45.0% | |
| CCGAGAGTAACACAAACTAC+TGG | - | chr6.4:63771788-63771807 | MS.gene66287:CDS | 45.0% | |
| CTATCTCCAGCATGAATCCT+CGG | + | chr6.4:63771601-63771620 | None:intergenic | 45.0% | |
| GAAACTGGATCCTCCTTCAA+AGG | - | chr6.4:63769997-63770016 | MS.gene66287:CDS | 45.0% | |
| GAATGTCGAGAATGCAAGAG+AGG | + | chr6.4:63769156-63769175 | None:intergenic | 45.0% | |
| GAGAATGCAAGAGAGGAATG+AGG | + | chr6.4:63769149-63769168 | None:intergenic | 45.0% | |
| GAGCCTAACATCTCTATGTC+TGG | + | chr6.4:63770351-63770370 | None:intergenic | 45.0% | |
| GATCGAGACACACACGATAT+CGG | - | chr6.4:63769073-63769092 | MS.gene66287:CDS | 45.0% | |
| GATTCATGCTGGAGATAGTG+TGG | - | chr6.4:63771603-63771622 | MS.gene66287:CDS | 45.0% | |
| GCAGGTTTCGCCATAAAATG+TGG | + | chr6.4:63769565-63769584 | None:intergenic | 45.0% | |
| GCCAGAACCAATGCTAGAAA+TGG | - | chr6.4:63771757-63771776 | MS.gene66287:intron | 45.0% | |
| GGGTTATGAATATGGGCCTA+TGG | - | chr6.4:63770601-63770620 | MS.gene66287:intron | 45.0% | |
| GTTACAAGCATGCAGGATGT+GGG | - | chr6.4:63770581-63770600 | MS.gene66287:intron | 45.0% | |
| TGATTCCTCGAGGTTTGACA+AGG | - | chr6.4:63769789-63769808 | MS.gene66287:CDS | 45.0% | |
| TGCGTTGGGACAAATTGCTT+TGG | - | chr6.4:63769717-63769736 | MS.gene66287:CDS | 45.0% | |
| TGTGAGAAGCAAACCGTTAG+AGG | - | chr6.4:63770718-63770737 | MS.gene66287:CDS | 45.0% | |
| TGTTACAAGCATGCAGGATG+TGG | - | chr6.4:63770580-63770599 | MS.gene66287:intron | 45.0% | |
| TTAGCACCGTATCTTCTGGA+AGG | - | chr6.4:63771970-63771989 | MS.gene66287:CDS | 45.0% | |
| TTGTTACACCACACGGTATG+TGG | - | chr6.4:63771259-63771278 | MS.gene66287:CDS | 45.0% | |
| ! | AGTGTTCTTTTGACGGCTGT+TGG | - | chr6.4:63769637-63769656 | MS.gene66287:CDS | 45.0% |
| ! | TAGTTTGTGTTACTCTCGGG+AGG | + | chr6.4:63771787-63771806 | None:intergenic | 45.0% |
| !! | AGATGGCTTTGGAGTGCATA+CGG | + | chr6.4:63771494-63771513 | None:intergenic | 45.0% |
| !! | CCTCCTGTTTCGGTTTTGTA+TGG | - | chr6.4:63769505-63769524 | MS.gene66287:intron | 45.0% |
| !! | GACGCAGAGTGTTCTTTTGA+CGG | - | chr6.4:63769630-63769649 | MS.gene66287:CDS | 45.0% |
| !! | GGCTGTTGGTAGTATTAGAG+AGG | - | chr6.4:63769651-63769670 | MS.gene66287:CDS | 45.0% |
| !! | TTGGCTCTGCCTCACAAATT+TGG | + | chr6.4:63771449-63771468 | None:intergenic | 45.0% |
| AAAGCGGCTTCTGTTGCGTT+GGG | - | chr6.4:63769703-63769722 | MS.gene66287:CDS | 50.0% | |
| ACTACCGAGCCTTCAGAAAC+TGG | - | chr6.4:63769982-63770001 | MS.gene66287:CDS | 50.0% | |
| ATCTCTATGTCTGGACTCGG+TGG | + | chr6.4:63770342-63770361 | None:intergenic | 50.0% | |
| CACTCCTGCTTGTCATCCAT+AGG | + | chr6.4:63770620-63770639 | None:intergenic | 50.0% | |
| CCCCAGAACACATTCTGTAG+TGG | - | chr6.4:63770493-63770512 | MS.gene66287:intron | 50.0% | |
| CTTAACCAGTGCAGCCAAAC+AGG | - | chr6.4:63772284-63772303 | MS.gene66287:CDS | 50.0% | |
| GAGCAATGCAATTTGGTCCG+TGG | + | chr6.4:63772454-63772473 | None:intergenic | 50.0% | |
| GCAAGAGAGGAATGAGGAGA+TGG | + | chr6.4:63769143-63769162 | None:intergenic | 50.0% | |
| TAAAGCGGCTTCTGTTGCGT+TGG | - | chr6.4:63769702-63769721 | MS.gene66287:CDS | 50.0% | |
| TGTAAAACCGCATCCCTCAC+TGG | + | chr6.4:63769925-63769944 | None:intergenic | 50.0% | |
| ! | GCTTCAGCGTTTTGTCTTGC+TGG | - | chr6.4:63769460-63769479 | MS.gene66287:intron | 50.0% |
| ! | GGATCCAGTTTCTGAAGGCT+CGG | + | chr6.4:63769989-63770008 | None:intergenic | 50.0% |
| ! | GGCTCGGTAGTATAATGACC+CGG | + | chr6.4:63769973-63769992 | None:intergenic | 50.0% |
| ! | GTTGAAATGAGCACCGTCCA+CGG | - | chr6.4:63772434-63772453 | MS.gene66287:CDS | 50.0% |
| ! | TCCTGGGAGAAGCGACATTT+TGG | + | chr6.4:63771468-63771487 | None:intergenic | 50.0% |
| !! | CATTTTCAAGGAGCCAACCG+AGG | - | chr6.4:63771581-63771600 | MS.gene66287:CDS | 50.0% |
| AACTTGCCTGCTGCAGCCAT+GGG | + | chr6.4:63772017-63772036 | None:intergenic | 55.0% | |
| AGCCAACCGAGGATTCATGC+TGG | - | chr6.4:63771592-63771611 | MS.gene66287:CDS | 55.0% | |
| CACGCGGAATCCTCCTGTTT+CGG | - | chr6.4:63769495-63769514 | MS.gene66287:intron | 55.0% | |
| CATAATCCCATGGCTGCAGC+AGG | - | chr6.4:63772008-63772027 | MS.gene66287:CDS | 55.0% | |
| CTCCAGCATGAATCCTCGGT+TGG | + | chr6.4:63771597-63771616 | None:intergenic | 55.0% | |
| CTGCTGCAGCCATGGGATTA+TGG | + | chr6.4:63772010-63772029 | None:intergenic | 55.0% | |
| GACTGCCCCAAAAGTCAGAG+AGG | - | chr6.4:63771651-63771670 | MS.gene66287:CDS | 55.0% | |
| GGAGTGCATACGGAGATCCT+GGG | + | chr6.4:63771484-63771503 | None:intergenic | 55.0% | |
| GGTGAAACCAGTGAGGGATG+CGG | - | chr6.4:63769915-63769934 | MS.gene66287:CDS | 55.0% | |
| TATCTGCGGAGGTGACTCTG+TGG | - | chr6.4:63770295-63770314 | MS.gene66287:intron | 55.0% | |
| TGGAGTGCATACGGAGATCC+TGG | + | chr6.4:63771485-63771504 | None:intergenic | 55.0% | |
| TGGGCCTATGGATGACAAGC+AGG | - | chr6.4:63770613-63770632 | MS.gene66287:intron | 55.0% | |
| ! | CTGCACGCCTCTTTTCTGCA+TGG | + | chr6.4:63772544-63772563 | None:intergenic | 55.0% |
| ! | GCCAAAATGTCGCTTCTCCC+AGG | - | chr6.4:63771464-63771483 | MS.gene66287:intron | 55.0% |
| !! | AGCATTGGTTCTGGCAGCAG+AGG | + | chr6.4:63771752-63771771 | None:intergenic | 55.0% |
| CAGTGCAGCCAAACAGGCCT+GGG | - | chr6.4:63772290-63772309 | MS.gene66287:CDS | 60.0% | |
| GAACTTGCCTGCTGCAGCCA+TGG | + | chr6.4:63772018-63772037 | None:intergenic | 60.0% | |
| CCAGGCCTGTTTGGCTGCAC+TGG | + | chr6.4:63772292-63772311 | None:intergenic | 65.0% | |
| CCAGTGCAGCCAAACAGGCC+TGG | - | chr6.4:63772289-63772308 | MS.gene66287:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 63768998 | 63772596 | 63768998 | ID=MS.gene66287 |
| chr6.4 | mRNA | 63768998 | 63772596 | 63768998 | ID=MS.gene66287.t1;Parent=MS.gene66287 |
| chr6.4 | exon | 63771784 | 63772596 | 63771784 | ID=MS.gene66287.t1.exon1;Parent=MS.gene66287.t1 |
| chr6.4 | CDS | 63771784 | 63772596 | 63771784 | ID=cds.MS.gene66287.t1;Parent=MS.gene66287.t1 |
| chr6.4 | exon | 63771576 | 63771678 | 63771576 | ID=MS.gene66287.t1.exon2;Parent=MS.gene66287.t1 |
| chr6.4 | CDS | 63771576 | 63771678 | 63771576 | ID=cds.MS.gene66287.t1;Parent=MS.gene66287.t1 |
| chr6.4 | exon | 63770660 | 63771303 | 63770660 | ID=MS.gene66287.t1.exon3;Parent=MS.gene66287.t1 |
| chr6.4 | CDS | 63770660 | 63771303 | 63770660 | ID=cds.MS.gene66287.t1;Parent=MS.gene66287.t1 |
| chr6.4 | exon | 63769565 | 63770275 | 63769565 | ID=MS.gene66287.t1.exon4;Parent=MS.gene66287.t1 |
| chr6.4 | CDS | 63769565 | 63770275 | 63769565 | ID=cds.MS.gene66287.t1;Parent=MS.gene66287.t1 |
| chr6.4 | exon | 63768998 | 63769163 | 63768998 | ID=MS.gene66287.t1.exon5;Parent=MS.gene66287.t1 |
| chr6.4 | CDS | 63768998 | 63769163 | 63768998 | ID=cds.MS.gene66287.t1;Parent=MS.gene66287.t1 |
| Gene Sequence |
| Protein sequence |
