Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66674.t1 | XP_013455749.1 | 84.5 | 375 | 51 | 1 | 2 | 369 | 3 | 377 | 8.50E-86 | 327.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66674.t1 | Q9Y3A4 | 28.0 | 157 | 85 | 3 | 225 | 369 | 140 | 280 | 1.4e-07 | 58.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66674.t1 | A0A072UV85 | 84.5 | 375 | 51 | 1 | 2 | 369 | 3 | 377 | 6.1e-86 | 327.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene66674 | 0.846264 | 2.42E-59 | -1.69E-46 |
| MS.gene049159 | MS.gene66674 | 0.805195 | 1.50E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene66674 | 0.800651 | 1.30E-48 | -1.69E-46 |
| MS.gene051210 | MS.gene66674 | 0.830249 | 3.27E-55 | -1.69E-46 |
| MS.gene051490 | MS.gene66674 | 0.811074 | 8.40E-51 | -1.69E-46 |
| MS.gene052434 | MS.gene66674 | 0.801373 | 9.28E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene66674 | 0.801913 | 7.19E-49 | -1.69E-46 |
| MS.gene052896 | MS.gene66674 | 0.837625 | 4.65E-57 | -1.69E-46 |
| MS.gene053381 | MS.gene66674 | 0.809578 | 1.77E-50 | -1.69E-46 |
| MS.gene054472 | MS.gene66674 | 0.806816 | 6.85E-50 | -1.69E-46 |
| MS.gene055313 | MS.gene66674 | 0.817234 | 3.67E-52 | -1.69E-46 |
| MS.gene055465 | MS.gene66674 | 0.817395 | 3.37E-52 | -1.69E-46 |
| MS.gene055466 | MS.gene66674 | 0.807386 | 5.19E-50 | -1.69E-46 |
| MS.gene055468 | MS.gene66674 | 0.819713 | 1.01E-52 | -1.69E-46 |
| MS.gene055469 | MS.gene66674 | 0.818899 | 1.54E-52 | -1.69E-46 |
| MS.gene055513 | MS.gene66674 | 0.816057 | 6.73E-52 | -1.69E-46 |
| MS.gene057360 | MS.gene66674 | 0.808324 | 3.27E-50 | -1.69E-46 |
| MS.gene057915 | MS.gene66674 | 0.841713 | 4.02E-58 | -1.69E-46 |
| MS.gene059725 | MS.gene66674 | 0.819269 | 1.27E-52 | -1.69E-46 |
| MS.gene06052 | MS.gene66674 | 0.82294 | 1.81E-53 | -1.69E-46 |
| MS.gene060998 | MS.gene66674 | 0.810285 | 1.24E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66674.t1 | MTR_4g051625 | 92.000 | 375 | 23 | 1 | 2 | 369 | 3 | 377 | 0.0 | 661 |
| MS.gene66674.t1 | MTR_4g051625 | 79.076 | 368 | 39 | 3 | 2 | 369 | 3 | 332 | 0.0 | 539 |
| MS.gene66674.t1 | MTR_8g085800 | 75.472 | 371 | 51 | 3 | 1 | 369 | 2 | 334 | 0.0 | 535 |
| MS.gene66674.t1 | MTR_1g090650 | 82.803 | 157 | 27 | 0 | 213 | 369 | 32 | 188 | 2.87e-91 | 272 |
| MS.gene66674.t1 | MTR_8g085830 | 62.626 | 99 | 10 | 2 | 271 | 369 | 2 | 73 | 2.51e-31 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66674.t1 | AT5G38720 | 67.114 | 149 | 48 | 1 | 222 | 369 | 158 | 306 | 1.17e-70 | 223 |
| MS.gene66674.t1 | AT5G38720 | 67.114 | 149 | 48 | 1 | 222 | 369 | 165 | 313 | 1.20e-70 | 224 |
| MS.gene66674.t1 | AT5G38720 | 67.114 | 149 | 48 | 1 | 222 | 369 | 177 | 325 | 8.23e-70 | 222 |
Find 60 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTTTATAATCTCCATTTC+AGG | 0.167824 | 4.3:-48459582 | None:intergenic |
| ATTAGAATCTCTGTGCTTCT+TGG | 0.245269 | 4.3:-48459850 | None:intergenic |
| GAAAGTAAGTAAGGGGAAAA+AGG | 0.255499 | 4.3:+48458790 | MS.gene66674:CDS |
| TCTAAATCAATTTCATCTTC+TGG | 0.271415 | 4.3:-48459675 | None:intergenic |
| AAATCAACTTCAACAGCTTC+TGG | 0.277158 | 4.3:-48459400 | None:intergenic |
| AAGTTTCAACTGGCCGAAAA+AGG | 0.320780 | 4.3:+48459341 | MS.gene66674:CDS |
| GCAGCTTGTAAAGGTGAAAA+AGG | 0.327323 | 4.3:+48458889 | MS.gene66674:CDS |
| CATCTCCAGAGGAAATAATA+TGG | 0.345728 | 4.3:-48460061 | None:intergenic |
| TCCTGAAATGGAGATTATAA+AGG | 0.363253 | 4.3:+48459581 | MS.gene66674:CDS |
| CGTTATGATGAAAGTAAGTA+AGG | 0.364022 | 4.3:+48458781 | None:intergenic |
| AGTTGCAACATCATTTAATA+AGG | 0.369876 | 4.3:-48463071 | None:intergenic |
| AAGTTATTACTATCCGAAAA+AGG | 0.377799 | 4.3:+48458915 | MS.gene66674:CDS |
| GTTGATTTAGAAGAGCAAAA+TGG | 0.379449 | 4.3:+48459415 | MS.gene66674:CDS |
| AGCTGCTCTAGAGAATAAAT+TGG | 0.384415 | 4.3:+48462288 | MS.gene66674:CDS |
| CCAACCCTGGTCTACTTTGA+TGG | 0.384521 | 4.3:-48460599 | None:intergenic |
| ATTGATTTAGAAGAGCAAAA+TGG | 0.385496 | 4.3:+48459687 | MS.gene66674:CDS |
| AAGCTACTACTAGTCGAAAA+AGG | 0.402492 | 4.3:+48459616 | MS.gene66674:CDS |
| GACATCCATATTATTTCCTC+TGG | 0.405588 | 4.3:+48460056 | MS.gene66674:CDS |
| TGTTTCAGTGGATCCTGAAA+TGG | 0.428608 | 4.3:+48459569 | MS.gene66674:intron |
| AAAAGAGAAGCTCAGAGAAA+TGG | 0.446445 | 4.3:+48462358 | MS.gene66674:CDS |
| AAAGAGAGAACAAAATCATC+AGG | 0.460936 | 4.3:+48460031 | MS.gene66674:CDS |
| CCTGAAATGGAGATTATAAA+GGG | 0.465886 | 4.3:+48459582 | MS.gene66674:CDS |
| TCCATCCTCCTTCTGCAGCA+AGG | 0.468377 | 4.3:-48462189 | None:intergenic |
| AAGTGGGATTGCTGTGGGCT+CGG | 0.474663 | 4.3:+48462258 | MS.gene66674:CDS |
| TTCAGTGGATCATGTAATGC+AGG | 0.478510 | 4.3:+48459297 | MS.gene66674:intron |
| GGAGATTATAAAGGGAAGAA+AGG | 0.484365 | 4.3:+48459590 | MS.gene66674:CDS |
| GGAATTGCAGAGCAAATTTG+AGG | 0.494356 | 4.3:+48463001 | MS.gene66674:CDS |
| CCATCCTCCTTCTGCAGCAA+GGG | 0.496362 | 4.3:-48462188 | None:intergenic |
| CTCTGAAAGTGGGATTGCTG+TGG | 0.497570 | 4.3:+48462252 | MS.gene66674:CDS |
| GATGTTGAGACAGTGGATAA+TGG | 0.505580 | 4.3:+48458863 | MS.gene66674:CDS |
| AAAACTACTGACTCTGAAAG+TGG | 0.522611 | 4.3:+48462241 | MS.gene66674:CDS |
| GGCCAAGAAGAAAAGAAGAA+AGG | 0.528576 | 4.3:+48459989 | MS.gene66674:CDS |
| AATGATGTCAGATGGAATAG+TGG | 0.531547 | 4.3:+48459791 | MS.gene66674:intron |
| CCATCAAAGTAGACCAGGGT+TGG | 0.532437 | 4.3:+48460599 | MS.gene66674:CDS |
| CGAGAAGAAGAAGAAAAGTA+AGG | 0.533573 | 4.3:+48458826 | MS.gene66674:CDS |
| TCAAACTACAGAGTGGATCA+TGG | 0.543131 | 4.3:+48460572 | MS.gene66674:intron |
| TCTGAAAGTGGGATTGCTGT+GGG | 0.543670 | 4.3:+48462253 | MS.gene66674:CDS |
| CCCTTGCTGCAGAAGGAGGA+TGG | 0.545811 | 4.3:+48462188 | MS.gene66674:CDS |
| TCAAAGTAGACCAGGGTTGG+AGG | 0.546972 | 4.3:+48460602 | MS.gene66674:CDS |
| GTTATGATGAAAGTAAGTAA+GGG | 0.558300 | 4.3:+48458782 | None:intergenic |
| TGCTGCAGAAGGAGGATGGA+CGG | 0.572937 | 4.3:+48462192 | MS.gene66674:CDS |
| AAAGCCCTTGCTGCAGAAGG+AGG | 0.575071 | 4.3:+48462184 | MS.gene66674:CDS |
| ACATAGTGATTCTAAAGAAG+AGG | 0.580245 | 4.3:+48459815 | MS.gene66674:CDS |
| GAATACCATCAAAGTAGACC+AGG | 0.581962 | 4.3:+48460594 | MS.gene66674:CDS |
| GTTGTTGTAGAAGAGCAAAA+TGG | 0.586388 | 4.3:+48458989 | MS.gene66674:CDS |
| TAATGGAATGCAGCTTGTAA+AGG | 0.594396 | 4.3:+48458880 | MS.gene66674:CDS |
| AAACTACTGACTCTGAAAGT+GGG | 0.597816 | 4.3:+48462242 | MS.gene66674:CDS |
| GAAGAAGAAGAAAAGTAAGG+TGG | 0.599273 | 4.3:+48458829 | MS.gene66674:CDS |
| GGAGATGATGACTGTTCACA+TGG | 0.610186 | 4.3:+48460077 | MS.gene66674:CDS |
| GACGGTGGTTCAACACCACA+AGG | 0.613486 | 4.3:+48462210 | MS.gene66674:CDS |
| TTATGATGAAAGTAAGTAAG+GGG | 0.616703 | 4.3:+48458783 | None:intergenic |
| TGGTTCAACACCACAAGGGT+AGG | 0.619462 | 4.3:+48462215 | MS.gene66674:CDS |
| CATGTAATGCAGGTTACAGA+GGG | 0.619802 | 4.3:+48459307 | MS.gene66674:CDS |
| TCATGTAATGCAGGTTACAG+AGG | 0.632395 | 4.3:+48459306 | MS.gene66674:CDS |
| TGCAGCAGTTGAGAGCTGCT+AGG | 0.640397 | 4.3:+48463039 | MS.gene66674:CDS |
| AAATGCTGATGTTGAGACAG+TGG | 0.670253 | 4.3:+48458856 | MS.gene66674:CDS |
| TGAACAGTCATCATCTCCAG+AGG | 0.671970 | 4.3:-48460072 | None:intergenic |
| TGCAGAAGGAGGATGGACGG+TGG | 0.709610 | 4.3:+48462195 | MS.gene66674:CDS |
| AATACCATCAAAGTAGACCA+GGG | 0.721380 | 4.3:+48460595 | MS.gene66674:CDS |
| ACGGTGGTTCAACACCACAA+GGG | 0.755501 | 4.3:+48462211 | MS.gene66674:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATATTTATTGTTATACA+TGG | + | chr4.3:48460477-48460496 | MS.gene66674:intron | 10.0% |
| !!! | TTTTAGTTTATGAAATATTA+AGG | + | chr4.3:48462624-48462643 | MS.gene66674:intron | 10.0% |
| !! | AAAAAGAAAAATAAAGAAGT+TGG | + | chr4.3:48462313-48462332 | MS.gene66674:CDS | 15.0% |
| !!! | AAATTATATGATTTTATGTG+AGG | + | chr4.3:48462868-48462887 | MS.gene66674:intron | 15.0% |
| !!! | AACTTCTTTATTTTTCTTTT+TGG | - | chr4.3:48462314-48462333 | None:intergenic | 15.0% |
| !!! | AATAATAATTTTGTGACAAA+TGG | - | chr4.3:48459053-48459072 | None:intergenic | 15.0% |
| !!! | AATTATATAGTTTTTGACTT+GGG | + | chr4.3:48460544-48460563 | MS.gene66674:intron | 15.0% |
| !!! | AGAAGAAAATTAATTTTGAA+TGG | - | chr4.3:48461957-48461976 | None:intergenic | 15.0% |
| !!! | TAATTATATAGTTTTTGACT+TGG | + | chr4.3:48460543-48460562 | MS.gene66674:intron | 15.0% |
| !!! | TTATCTAGGATATAAAAATA+TGG | - | chr4.3:48462410-48462429 | None:intergenic | 15.0% |
| !! | AAATCATAAAGATGGTAATT+AGG | + | chr4.3:48462531-48462550 | MS.gene66674:intron | 20.0% |
| !! | AACCTTATACAATTATAACT+TGG | - | chr4.3:48460971-48460990 | None:intergenic | 20.0% |
| !! | AATCATAAAGATGGTAATTA+GGG | + | chr4.3:48462532-48462551 | MS.gene66674:intron | 20.0% |
| !! | ATAAAGGAAAATCATAAAGA+TGG | + | chr4.3:48462523-48462542 | MS.gene66674:intron | 20.0% |
| !! | ATCCAAGTTATAATTGTATA+AGG | + | chr4.3:48460966-48460985 | MS.gene66674:intron | 20.0% |
| !! | CATACATATACATAAAGTAA+TGG | + | chr4.3:48460276-48460295 | MS.gene66674:intron | 20.0% |
| !! | CATTACTTTATGTATATGTA+TGG | - | chr4.3:48460278-48460297 | None:intergenic | 20.0% |
| !! | TCATAGAAACAAAGATATTA+GGG | - | chr4.3:48462738-48462757 | None:intergenic | 20.0% |
| !! | TTCATAGAAACAAAGATATT+AGG | - | chr4.3:48462739-48462758 | None:intergenic | 20.0% |
| !!! | AATGAACCTTTTATACTATT+AGG | - | chr4.3:48462689-48462708 | None:intergenic | 20.0% |
| !!! | CATAAAATAGCAAAATTTTG+AGG | - | chr4.3:48460746-48460765 | None:intergenic | 20.0% |
| !!! | GAACTTTCTTTGAAATAAAT+CGG | + | chr4.3:48459545-48459564 | MS.gene66674:intron | 20.0% |
| ! | AAATAAATTGCTTGTTTCAG+TGG | + | chr4.3:48459282-48459301 | MS.gene66674:intron | 25.0% |
| ! | AAGTTATTACTATCCGAAAA+AGG | + | chr4.3:48458915-48458934 | MS.gene66674:CDS | 25.0% |
| ! | ACCAAAATTAGTAGCAAATA+TGG | - | chr4.3:48462119-48462138 | None:intergenic | 25.0% |
| ! | ATCATAAAGATGGTAATTAG+GGG | + | chr4.3:48462533-48462552 | MS.gene66674:intron | 25.0% |
| ! | ATCTTAATTTAATGGCAGAA+GGG | - | chr4.3:48462768-48462787 | None:intergenic | 25.0% |
| ! | CCAAAATTAGTAGCAAATAT+GGG | - | chr4.3:48462118-48462137 | None:intergenic | 25.0% |
| ! | GAGAGTAATTGATAGAAATA+CGG | + | chr4.3:48461309-48461328 | MS.gene66674:intron | 25.0% |
| ! | GAGATAAATATCAATTCATC+AGG | - | chr4.3:48461119-48461138 | None:intergenic | 25.0% |
| ! | TAAATTTAAACCAACGATGT+TGG | + | chr4.3:48462492-48462511 | MS.gene66674:intron | 25.0% |
| ! | TATTCACAATATCATGAAGT+CGG | + | chr4.3:48459069-48459088 | MS.gene66674:intron | 25.0% |
| ! | TCGCTGTATAATAAAATTCA+TGG | - | chr4.3:48460827-48460846 | None:intergenic | 25.0% |
| ! | TCTAAATCAATTTCATCTTC+TGG | - | chr4.3:48459678-48459697 | None:intergenic | 25.0% |
| ! | TTGACCAAAAAATAATTGCA+TGG | - | chr4.3:48462144-48462163 | None:intergenic | 25.0% |
| !! | ATTGATTTAGAAGAGCAAAA+TGG | + | chr4.3:48459687-48459706 | MS.gene66674:CDS | 25.0% |
| !! | ATTTGACTGTATTTTTCTCT+TGG | + | chr4.3:48461661-48461680 | MS.gene66674:intron | 25.0% |
| !! | GGTTTTTATGAGTAAGAATA+AGG | + | chr4.3:48461330-48461349 | MS.gene66674:intron | 25.0% |
| !! | TCGTGACATTTAGTATTTTT+CGG | + | chr4.3:48459175-48459194 | MS.gene66674:intron | 25.0% |
| !!! | AAAAGTCATTTTCATTCATC+TGG | + | chr4.3:48460929-48460948 | MS.gene66674:intron | 25.0% |
| !!! | AAAGTCATTTTCATTCATCT+GGG | + | chr4.3:48460930-48460949 | MS.gene66674:intron | 25.0% |
| !!! | AATGTGTTATGTTTTTGTAC+TGG | + | chr4.3:48459510-48459529 | MS.gene66674:intron | 25.0% |
| !!! | AATTATTTTTTGGTCAATGC+AGG | + | chr4.3:48462147-48462166 | MS.gene66674:intron | 25.0% |
| !!! | AGAGTTTTTCTTTGTTTTGT+AGG | + | chr4.3:48459954-48459973 | MS.gene66674:intron | 25.0% |
| !!! | CTTTTGCAAGTTATTTTTCA+AGG | - | chr4.3:48460914-48460933 | None:intergenic | 25.0% |
| !!! | GTTTCCATGCAATTATTTTT+TGG | + | chr4.3:48462137-48462156 | MS.gene66674:intron | 25.0% |
| !!! | TTTTTCTTTGTTTTGTAGGT+AGG | + | chr4.3:48459958-48459977 | MS.gene66674:intron | 25.0% |
| AAAAAGCTGAAAGTTTCAAC+TGG | + | chr4.3:48459331-48459350 | MS.gene66674:CDS | 30.0% | |
| AAAGAGAGAACAAAATCATC+AGG | + | chr4.3:48460031-48460050 | MS.gene66674:CDS | 30.0% | |
| AAAGTAAGTAAGGGGAAAAA+GGG | + | chr4.3:48458791-48458810 | MS.gene66674:CDS | 30.0% | |
| AACAAGGACAAAAATCTAGT+TGG | + | chr4.3:48458941-48458960 | MS.gene66674:CDS | 30.0% | |
| AACTACTTACGAGGAAAAAT+TGG | + | chr4.3:48460653-48460672 | MS.gene66674:CDS | 30.0% | |
| AGGGTTATCTGACTATAATT+AGG | - | chr4.3:48460779-48460798 | None:intergenic | 30.0% | |
| ATTCAAATGATATGCATGCA+GGG | - | chr4.3:48461168-48461187 | None:intergenic | 30.0% | |
| CAAAACAAAGAAAAACTCTG+AGG | - | chr4.3:48459953-48459972 | None:intergenic | 30.0% | |
| CATCTAAATTTACACCAACA+TGG | + | chr4.3:48462568-48462587 | MS.gene66674:intron | 30.0% | |
| CATGTTGGTGTAAATTTAGA+TGG | - | chr4.3:48462570-48462589 | None:intergenic | 30.0% | |
| CATTACTGTTCTGTAATCAA+GGG | - | chr4.3:48461363-48461382 | None:intergenic | 30.0% | |
| CCTGAAATGGAGATTATAAA+GGG | + | chr4.3:48459582-48459601 | MS.gene66674:CDS | 30.0% | |
| CTGAAATGACATATCCAAAA+TGG | + | chr4.3:48461798-48461817 | MS.gene66674:intron | 30.0% | |
| GAAACAGCTAGAAATTATCT+AGG | - | chr4.3:48462424-48462443 | None:intergenic | 30.0% | |
| GAACATTAAACACTTGAGTA+TGG | - | chr4.3:48462068-48462087 | None:intergenic | 30.0% | |
| GCTAGACCTAATAGTATAAA+AGG | + | chr4.3:48462680-48462699 | MS.gene66674:intron | 30.0% | |
| GTAATTCTGCGAAGAAAAAA+AGG | - | chr4.3:48460120-48460139 | None:intergenic | 30.0% | |
| TATTCAAATGATATGCATGC+AGG | - | chr4.3:48461169-48461188 | None:intergenic | 30.0% | |
| TCATAAAGATGGTAATTAGG+GGG | + | chr4.3:48462534-48462553 | MS.gene66674:intron | 30.0% | |
| TCATAGCTGTAAATTGAACA+TGG | - | chr4.3:48462090-48462109 | None:intergenic | 30.0% | |
| TCCTGAAATGGAGATTATAA+AGG | + | chr4.3:48459581-48459600 | MS.gene66674:CDS | 30.0% | |
| TCTTAAAGCAAAACAGAAGT+TGG | + | chr4.3:48460701-48460720 | MS.gene66674:intron | 30.0% | |
| TTGTAATAAACTGCACTTTC+TGG | + | chr4.3:48459893-48459912 | MS.gene66674:intron | 30.0% | |
| ! | AAATAAATCGGTTGTTTCAG+TGG | + | chr4.3:48459557-48459576 | MS.gene66674:intron | 30.0% |
| ! | ACAGAACTTTTCTGTTTATG+GGG | + | chr4.3:48461040-48461059 | MS.gene66674:intron | 30.0% |
| ! | ACATAGTGATTCTAAAGAAG+AGG | + | chr4.3:48459815-48459834 | MS.gene66674:CDS | 30.0% |
| ! | AGAAAGTGCAGTTTATTACA+AGG | - | chr4.3:48459894-48459913 | None:intergenic | 30.0% |
| ! | ATATGTCATTTCAGTTACGA+TGG | - | chr4.3:48461792-48461811 | None:intergenic | 30.0% |
| ! | GACAGAACTTTTCTGTTTAT+GGG | + | chr4.3:48461039-48461058 | MS.gene66674:intron | 30.0% |
| ! | GTTGATTTAGAAGAGCAAAA+TGG | + | chr4.3:48459415-48459434 | MS.gene66674:CDS | 30.0% |
| ! | TCAACAGGTTGAAAGAATAA+TGG | - | chr4.3:48460401-48460420 | None:intergenic | 30.0% |
| ! | TGACAGAACTTTTCTGTTTA+TGG | + | chr4.3:48461038-48461057 | MS.gene66674:intron | 30.0% |
| ! | TGATTTTGTTCTCTCTTTTC+TGG | - | chr4.3:48460029-48460048 | None:intergenic | 30.0% |
| ! | TTCCTTTCTTCTTTTCTTCT+TGG | - | chr4.3:48459994-48460013 | None:intergenic | 30.0% |
| !! | AGACTTTTTAACTACTTACG+AGG | + | chr4.3:48460644-48460663 | MS.gene66674:CDS | 30.0% |
| !! | CCCATATTTGCTACTAATTT+TGG | + | chr4.3:48462115-48462134 | MS.gene66674:intron | 30.0% |
| !! | GATGTTGGTGGTTTAAATAA+AGG | + | chr4.3:48462507-48462526 | MS.gene66674:intron | 30.0% |
| !!! | GAGCTTCTCTTTTTTGAAAA+CGG | - | chr4.3:48462351-48462370 | None:intergenic | 30.0% |
| !!! | GGTTATTTTTACATGAACGA+TGG | + | chr4.3:48460231-48460250 | MS.gene66674:intron | 30.0% |
| !!! | TGTCCTTGTTTTTCCTTTTT+CGG | - | chr4.3:48459357-48459376 | None:intergenic | 30.0% |
| AAAAGAGAAGCTCAGAGAAA+TGG | + | chr4.3:48462358-48462377 | MS.gene66674:CDS | 35.0% | |
| AAATAGAAGGAGAACGTTTC+GGG | - | chr4.3:48461517-48461536 | None:intergenic | 35.0% | |
| AAATCAACTTCAACAGCTTC+TGG | - | chr4.3:48459403-48459422 | None:intergenic | 35.0% | |
| AAGCGAGAAACATCACAAAT+AGG | - | chr4.3:48462715-48462734 | None:intergenic | 35.0% | |
| AAGCTACTACTAGTCGAAAA+AGG | + | chr4.3:48459616-48459635 | MS.gene66674:CDS | 35.0% | |
| AATACCATCAAAGTAGACCA+GGG | + | chr4.3:48460595-48460614 | MS.gene66674:CDS | 35.0% | |
| AATGATGTCAGATGGAATAG+TGG | + | chr4.3:48459791-48459810 | MS.gene66674:intron | 35.0% | |
| ACAAGTATGCACAAAGTACA+CGG | - | chr4.3:48460443-48460462 | None:intergenic | 35.0% | |
| ACACTAGCAGATAATGTTTC+TGG | + | chr4.3:48462801-48462820 | MS.gene66674:intron | 35.0% | |
| ACAGTAATGCAGAATCATTG+AGG | + | chr4.3:48461374-48461393 | MS.gene66674:intron | 35.0% | |
| ACCTTTCTCTTCCTTAAGTT+GGG | + | chr4.3:48461926-48461945 | MS.gene66674:intron | 35.0% | |
| AGCGAGAAACATCACAAATA+GGG | - | chr4.3:48462714-48462733 | None:intergenic | 35.0% | |
| ATATGAGAAGTGAAGCTTGA+AGG | - | chr4.3:48461883-48461902 | None:intergenic | 35.0% | |
| ATTAGAATCTCTGTGCTTCT+TGG | - | chr4.3:48459853-48459872 | None:intergenic | 35.0% | |
| ATTTAAACCAACGATGTTGG+TGG | + | chr4.3:48462495-48462514 | MS.gene66674:intron | 35.0% | |
| ATTTAAACCACCAACATCGT+TGG | - | chr4.3:48462505-48462524 | None:intergenic | 35.0% | |
| CAAATAGAAGGAGAACGTTT+CGG | - | chr4.3:48461518-48461537 | None:intergenic | 35.0% | |
| CAGCATAGTTACATATTGTG+AGG | + | chr4.3:48460210-48460229 | MS.gene66674:intron | 35.0% | |
| CAGTAATGCAGAATCATTGA+GGG | + | chr4.3:48461375-48461394 | MS.gene66674:intron | 35.0% | |
| CATCTCCAGAGGAAATAATA+TGG | - | chr4.3:48460064-48460083 | None:intergenic | 35.0% | |
| CCCTTTATAATCTCCATTTC+AGG | - | chr4.3:48459585-48459604 | None:intergenic | 35.0% | |
| CGAGAAGAAGAAGAAAAGTA+AGG | + | chr4.3:48458826-48458845 | MS.gene66674:CDS | 35.0% | |
| CTGACATCATTGAGGAAAAA+AGG | - | chr4.3:48459782-48459801 | None:intergenic | 35.0% | |
| GAAAGGTTTCAGCAAATAGA+AGG | - | chr4.3:48461530-48461549 | None:intergenic | 35.0% | |
| GAAAGTAAGTAAGGGGAAAA+AGG | + | chr4.3:48458790-48458809 | MS.gene66674:CDS | 35.0% | |
| GAAGAAGAAGAAAAGTAAGG+TGG | + | chr4.3:48458829-48458848 | MS.gene66674:CDS | 35.0% | |
| GAATTCATAGCTAGGTAACT+TGG | + | chr4.3:48461730-48461749 | MS.gene66674:intron | 35.0% | |
| GACATCCATATTATTTCCTC+TGG | + | chr4.3:48460056-48460075 | MS.gene66674:CDS | 35.0% | |
| GATGTTTCACAATACGACAA+TGG | - | chr4.3:48459925-48459944 | None:intergenic | 35.0% | |
| GATTTCTGTAGAGACATCAA+TGG | - | chr4.3:48461636-48461655 | None:intergenic | 35.0% | |
| GCATTACTGTTCTGTAATCA+AGG | - | chr4.3:48461364-48461383 | None:intergenic | 35.0% | |
| GGAGATTATAAAGGGAAGAA+AGG | + | chr4.3:48459590-48459609 | MS.gene66674:CDS | 35.0% | |
| GTGAGGTGAGAGATTATAAA+GGG | - | chr4.3:48462024-48462043 | None:intergenic | 35.0% | |
| GTTGTTGTAGAAGAGCAAAA+TGG | + | chr4.3:48458989-48459008 | MS.gene66674:CDS | 35.0% | |
| TAAACAACATGCTCACTCTT+AGG | - | chr4.3:48460378-48460397 | None:intergenic | 35.0% | |
| TAATGGAATGCAGCTTGTAA+AGG | + | chr4.3:48458880-48458899 | MS.gene66674:CDS | 35.0% | |
| TAGAAGAAACAAGGCATGTT+GGG | - | chr4.3:48461416-48461435 | None:intergenic | 35.0% | |
| TAGTCGAAAAAGGAAGAACA+AGG | + | chr4.3:48459626-48459645 | MS.gene66674:CDS | 35.0% | |
| TATCCGAAAAAGGAAGAACA+AGG | + | chr4.3:48458925-48458944 | MS.gene66674:CDS | 35.0% | |
| TATGGCAAAGAGAGTTAGTT+TGG | - | chr4.3:48462050-48462069 | None:intergenic | 35.0% | |
| TATTATCCCCACTGATAAGA+GGG | - | chr4.3:48460798-48460817 | None:intergenic | 35.0% | |
| TATTCCATCTGACATCATTG+AGG | - | chr4.3:48459790-48459809 | None:intergenic | 35.0% | |
| TGAGAAGGTTAGAAGAAACA+AGG | - | chr4.3:48461425-48461444 | None:intergenic | 35.0% | |
| TGCTGTCTCAAATTAGTACA+TGG | + | chr4.3:48462908-48462927 | MS.gene66674:intron | 35.0% | |
| TGTGAGGTGAGAGATTATAA+AGG | - | chr4.3:48462025-48462044 | None:intergenic | 35.0% | |
| TTACGAGGAAAAATTGGAAG+AGG | + | chr4.3:48460659-48460678 | MS.gene66674:CDS | 35.0% | |
| TTAGAAGAAACAAGGCATGT+TGG | - | chr4.3:48461417-48461436 | None:intergenic | 35.0% | |
| TTATTATCCCCACTGATAAG+AGG | - | chr4.3:48460799-48460818 | None:intergenic | 35.0% | |
| ! | AAGGCATACCGATTACATTA+AGG | + | chr4.3:48459117-48459136 | MS.gene66674:intron | 35.0% |
| ! | ACTTTTCTGTTTATGGGGTT+TGG | + | chr4.3:48461045-48461064 | MS.gene66674:intron | 35.0% |
| ! | ATGGCAAAGAGAGTTAGTTT+GGG | - | chr4.3:48462049-48462068 | None:intergenic | 35.0% |
| ! | CTCAACTCAAAAAGCACATA+AGG | - | chr4.3:48461199-48461218 | None:intergenic | 35.0% |
| ! | TATTGGGTTGTTACCCTTTA+TGG | - | chr4.3:48461847-48461866 | None:intergenic | 35.0% |
| ! | TCTTTCAACCTGTTGACTAT+TGG | + | chr4.3:48460405-48460424 | MS.gene66674:intron | 35.0% |
| ! | TGTCCTTGTTCTTCCTTTTT+CGG | - | chr4.3:48458931-48458950 | None:intergenic | 35.0% |
| ! | TTTTCCTCAATGATGTCAGA+TGG | + | chr4.3:48459783-48459802 | MS.gene66674:intron | 35.0% |
| !! | AAAACTACTGACTCTGAAAG+TGG | + | chr4.3:48462241-48462260 | MS.gene66674:CDS | 35.0% |
| !! | AAACTACTGACTCTGAAAGT+GGG | + | chr4.3:48462242-48462261 | MS.gene66674:CDS | 35.0% |
| !! | AATTTGGTGTTAGGATGTGA+AGG | + | chr4.3:48461080-48461099 | MS.gene66674:intron | 35.0% |
| !! | AGAAAGGTGTTAGAACTTTG+AGG | - | chr4.3:48461914-48461933 | None:intergenic | 35.0% |
| !! | AGCTGCTCTAGAGAATAAAT+TGG | + | chr4.3:48462288-48462307 | MS.gene66674:CDS | 35.0% |
| !! | GAAAGGTGTTAGAACTTTGA+GGG | - | chr4.3:48461913-48461932 | None:intergenic | 35.0% |
| !! | TTGGTGCTAAATTTGGTGTT+AGG | + | chr4.3:48461071-48461090 | MS.gene66674:intron | 35.0% |
| !! | TTGGTTGTTGGTGCTAAATT+TGG | + | chr4.3:48461064-48461083 | MS.gene66674:intron | 35.0% |
| !! | TTTTGACTCGTGATCAAGAT+TGG | - | chr4.3:48461572-48461591 | None:intergenic | 35.0% |
| !!! | CTTATGTGCTTTTTGAGTTG+AGG | + | chr4.3:48461197-48461216 | MS.gene66674:intron | 35.0% |
| !!! | TTTGTTTTGTAGGTAGGTCA+AGG | + | chr4.3:48459964-48459983 | MS.gene66674:intron | 35.0% |
| AAAGATGGTAATTAGGGGGA+TGG | + | chr4.3:48462538-48462557 | MS.gene66674:intron | 40.0% | |
| AAATGCTGATGTTGAGACAG+TGG | + | chr4.3:48458856-48458875 | MS.gene66674:CDS | 40.0% | |
| AAGGTGGAATAGGTCTCTAT+TGG | - | chr4.3:48461864-48461883 | None:intergenic | 40.0% | |
| AAGTTTCAACTGGCCGAAAA+AGG | + | chr4.3:48459341-48459360 | MS.gene66674:CDS | 40.0% | |
| AATAGAAGGAGAACGTTTCG+GGG | - | chr4.3:48461516-48461535 | None:intergenic | 40.0% | |
| AATGGTTACCTAATGAGCCA+CGG | + | chr4.3:48461816-48461835 | MS.gene66674:intron | 40.0% | |
| ACCCAACTTAAGGAAGAGAA+AGG | - | chr4.3:48461930-48461949 | None:intergenic | 40.0% | |
| AGATAACCCTCTTATCAGTG+GGG | + | chr4.3:48460789-48460808 | MS.gene66674:intron | 40.0% | |
| AGGTGGAATAGGTCTCTATT+GGG | - | chr4.3:48461863-48461882 | None:intergenic | 40.0% | |
| CAAGTATGCACAAAGTACAC+GGG | - | chr4.3:48460442-48460461 | None:intergenic | 40.0% | |
| CACCTTTCTCTTCCTTAAGT+TGG | + | chr4.3:48461925-48461944 | MS.gene66674:intron | 40.0% | |
| CAGATAACCCTCTTATCAGT+GGG | + | chr4.3:48460788-48460807 | MS.gene66674:intron | 40.0% | |
| CATGTAATGCAGGTTACAGA+GGG | + | chr4.3:48459307-48459326 | MS.gene66674:CDS | 40.0% | |
| CATTTCAGTTACGATGGTCA+AGG | - | chr4.3:48461786-48461805 | None:intergenic | 40.0% | |
| CCTTATCTATCGTTGTGGAA+AGG | - | chr4.3:48461547-48461566 | None:intergenic | 40.0% | |
| CCTTTCCACAACGATAGATA+AGG | + | chr4.3:48461544-48461563 | MS.gene66674:intron | 40.0% | |
| CTATAAGATCTGCTCCATGT+TGG | - | chr4.3:48462585-48462604 | None:intergenic | 40.0% | |
| CTCTGCAAGCAAAACATGAA+TGG | - | chr4.3:48462976-48462995 | None:intergenic | 40.0% | |
| GAATACCATCAAAGTAGACC+AGG | + | chr4.3:48460594-48460613 | MS.gene66674:CDS | 40.0% | |
| GAATGGACAAACCCAACTTA+AGG | - | chr4.3:48461940-48461959 | None:intergenic | 40.0% | |
| GATGTTGAGACAGTGGATAA+TGG | + | chr4.3:48458863-48458882 | MS.gene66674:CDS | 40.0% | |
| GCAGCTTGTAAAGGTGAAAA+AGG | + | chr4.3:48458889-48458908 | MS.gene66674:CDS | 40.0% | |
| GGAAGAGTGAATTCATAGCT+AGG | + | chr4.3:48461722-48461741 | MS.gene66674:intron | 40.0% | |
| GGAATACTCAAACTACAGAG+TGG | + | chr4.3:48460565-48460584 | MS.gene66674:intron | 40.0% | |
| GGAATTGCAGAGCAAATTTG+AGG | + | chr4.3:48463001-48463020 | MS.gene66674:CDS | 40.0% | |
| GGCCAAGAAGAAAAGAAGAA+AGG | + | chr4.3:48459989-48460008 | MS.gene66674:CDS | 40.0% | |
| GTGAGTTAATGATCGTGTTG+TGG | + | chr4.3:48459011-48459030 | MS.gene66674:intron | 40.0% | |
| TCAAACTACAGAGTGGATCA+TGG | + | chr4.3:48460572-48460591 | MS.gene66674:intron | 40.0% | |
| TCAGATAACCCTCTTATCAG+TGG | + | chr4.3:48460787-48460806 | MS.gene66674:intron | 40.0% | |
| TCATAGCTAGGTAACTTGGA+AGG | + | chr4.3:48461734-48461753 | MS.gene66674:intron | 40.0% | |
| TCATGTAATGCAGGTTACAG+AGG | + | chr4.3:48459306-48459325 | MS.gene66674:CDS | 40.0% | |
| TGGAACCTTATCTATCGTTG+TGG | - | chr4.3:48461552-48461571 | None:intergenic | 40.0% | |
| TGGCCGAAAAAGGAAAAACA+AGG | + | chr4.3:48459351-48459370 | MS.gene66674:CDS | 40.0% | |
| TGTTTCAGTGGATCCTGAAA+TGG | + | chr4.3:48459569-48459588 | MS.gene66674:intron | 40.0% | |
| TTCAGTGGATCATGTAATGC+AGG | + | chr4.3:48459297-48459316 | MS.gene66674:intron | 40.0% | |
| ! | ACCGATTACATTAAGGCATC+CGG | + | chr4.3:48459124-48459143 | MS.gene66674:intron | 40.0% |
| ! | ACCTGTTGACTATTGGATTG+CGG | + | chr4.3:48460412-48460431 | MS.gene66674:intron | 40.0% |
| ! | AGAGCAAAATGGTGAGTTGA+TGG | + | chr4.3:48459426-48459445 | MS.gene66674:intron | 40.0% |
| ! | ATTTTCTTCTGCATCCTAGC+AGG | + | chr4.3:48461967-48461986 | MS.gene66674:intron | 40.0% |
| ! | GAGGTTTATTTCTTCTGCCT+AGG | + | chr4.3:48461216-48461235 | MS.gene66674:intron | 40.0% |
| ! | GGCTCATTAGGTAACCATTT+TGG | - | chr4.3:48461815-48461834 | None:intergenic | 40.0% |
| ! | TAGTTTTCTTCCTACCCTTG+TGG | - | chr4.3:48462228-48462247 | None:intergenic | 40.0% |
| ! | TCTTCCACTTGCTGAAACAT+GGG | - | chr4.3:48461708-48461727 | None:intergenic | 40.0% |
| ! | TGGCAAAGAGAGTTAGTTTG+GGG | - | chr4.3:48462048-48462067 | None:intergenic | 40.0% |
| ! | TGTTTATGGGGTTTGGTTGT+TGG | + | chr4.3:48461052-48461071 | MS.gene66674:intron | 40.0% |
| ! | TGTTTTGCTTGCAGAGCTAA+TGG | + | chr4.3:48462980-48462999 | MS.gene66674:intron | 40.0% |
| ! | TTAGACTAGTTGAGCTGAGA+AGG | - | chr4.3:48461440-48461459 | None:intergenic | 40.0% |
| !! | AAATGGTGAGTTGATGACAG+TGG | + | chr4.3:48459432-48459451 | MS.gene66674:intron | 40.0% |
| !! | ATTATAAAGGGTGTTGCCGT+GGG | - | chr4.3:48462012-48462031 | None:intergenic | 40.0% |
| !! | GTGAGTTGATGGTTATGATG+TGG | + | chr4.3:48459709-48459728 | MS.gene66674:intron | 40.0% |
| AAAAAAGCCCTTGCTGCAGA+AGG | + | chr4.3:48462181-48462200 | MS.gene66674:CDS | 45.0% | |
| ACAACATGCTCACTCTTAGG+TGG | - | chr4.3:48460375-48460394 | None:intergenic | 45.0% | |
| ACCACAGAACTCACAAAAGC+CGG | - | chr4.3:48459146-48459165 | None:intergenic | 45.0% | |
| ACCGCAATCCAATAGTCAAC+AGG | - | chr4.3:48460416-48460435 | None:intergenic | 45.0% | |
| AGCCACGGAACAACCATAAA+GGG | + | chr4.3:48461831-48461850 | MS.gene66674:intron | 45.0% | |
| ATAGAAGGAGAACGTTTCGG+GGG | - | chr4.3:48461515-48461534 | None:intergenic | 45.0% | |
| ATGATCGCTATCTTGTTCGC+TGG | + | chr4.3:48462835-48462854 | MS.gene66674:intron | 45.0% | |
| CAAAACGACAGACAGCTGAA+TGG | + | chr4.3:48461587-48461606 | MS.gene66674:intron | 45.0% | |
| GAAACAAGGCATGTTGGGTA+AGG | - | chr4.3:48461411-48461430 | None:intergenic | 45.0% | |
| GCCGGATGCCTTAATGTAAT+CGG | - | chr4.3:48459128-48459147 | None:intergenic | 45.0% | |
| GGAGATGATGACTGTTCACA+TGG | + | chr4.3:48460077-48460096 | MS.gene66674:CDS | 45.0% | |
| GTCGGAAATCACCAAGTAGT+CGG | + | chr4.3:48459087-48459106 | MS.gene66674:intron | 45.0% | |
| GTGAAGCTTGAAGGTGGAAT+AGG | - | chr4.3:48461874-48461893 | None:intergenic | 45.0% | |
| TACCCTTTATGGTTGTTCCG+TGG | - | chr4.3:48461836-48461855 | None:intergenic | 45.0% | |
| TCTGAAAGTGGGATTGCTGT+GGG | + | chr4.3:48462253-48462272 | MS.gene66674:CDS | 45.0% | |
| TGAACAGTCATCATCTCCAG+AGG | - | chr4.3:48460075-48460094 | None:intergenic | 45.0% | |
| TGAGAAGTGAAGCTTGAAGG+TGG | - | chr4.3:48461880-48461899 | None:intergenic | 45.0% | |
| TTAGGTGGTAGGATGGATGT+TGG | - | chr4.3:48460360-48460379 | None:intergenic | 45.0% | |
| ! | AGTCACTTTCTATGCTGCCT+AGG | - | chr4.3:48461236-48461255 | None:intergenic | 45.0% |
| ! | CTCTTCCACTTGCTGAAACA+TGG | - | chr4.3:48461709-48461728 | None:intergenic | 45.0% |
| ! | TTTTGTAGGTAGGTCAAGGC+AGG | + | chr4.3:48459968-48459987 | MS.gene66674:intron | 45.0% |
| !! | GATTATAAAGGGTGTTGCCG+TGG | - | chr4.3:48462013-48462032 | None:intergenic | 45.0% |
| AAAGGCCTAGTACTCTCCCA+CGG | + | chr4.3:48461993-48462012 | MS.gene66674:intron | 50.0% | |
| ACAAGGCATGTTGGGTAAGG+AGG | - | chr4.3:48461408-48461427 | None:intergenic | 50.0% | |
| ACGATGGTCAAGGTTCTCGT+GGG | - | chr4.3:48461776-48461795 | None:intergenic | 50.0% | |
| ACGGTGGTTCAACACCACAA+GGG | + | chr4.3:48462211-48462230 | MS.gene66674:CDS | 50.0% | |
| ACTAGGCCTTTCATCCTGCT+AGG | - | chr4.3:48461984-48462003 | None:intergenic | 50.0% | |
| AGAACTGTTGGTCAGGACTC+GGG | - | chr4.3:48461472-48461491 | None:intergenic | 50.0% | |
| ATCCGTCAGAACTGTTGGTC+AGG | - | chr4.3:48461479-48461498 | None:intergenic | 50.0% | |
| ATGGCCCATGTTTCAGCAAG+TGG | + | chr4.3:48461701-48461720 | MS.gene66674:intron | 50.0% | |
| ATGGTAATTAGGGGGATGGC+GGG | + | chr4.3:48462542-48462561 | MS.gene66674:intron | 50.0% | |
| CAGAACTGTTGGTCAGGACT+CGG | - | chr4.3:48461473-48461492 | None:intergenic | 50.0% | |
| CATGCTCACTCTTAGGTGGT+AGG | - | chr4.3:48460371-48460390 | None:intergenic | 50.0% | |
| CCAACCCTGGTCTACTTTGA+TGG | - | chr4.3:48460602-48460621 | None:intergenic | 50.0% | |
| CCATCAAAGTAGACCAGGGT+TGG | + | chr4.3:48460599-48460618 | MS.gene66674:CDS | 50.0% | |
| CCTTATGCAAGCCGACTACT+TGG | - | chr4.3:48459101-48459120 | None:intergenic | 50.0% | |
| CGTTTCGGGGGACTATTGAT+TGG | - | chr4.3:48461503-48461522 | None:intergenic | 50.0% | |
| CTCACTCTTAGGTGGTAGGA+TGG | - | chr4.3:48460367-48460386 | None:intergenic | 50.0% | |
| CTGCATCCTAGCAGGATGAA+AGG | + | chr4.3:48461975-48461994 | MS.gene66674:intron | 50.0% | |
| GAAACATGGGCCATTGTTGC+TGG | - | chr4.3:48461695-48461714 | None:intergenic | 50.0% | |
| GAGCCACGGAACAACCATAA+AGG | + | chr4.3:48461830-48461849 | MS.gene66674:intron | 50.0% | |
| GATGGTAATTAGGGGGATGG+CGG | + | chr4.3:48462541-48462560 | MS.gene66674:intron | 50.0% | |
| GGTAGGATGGATGTTGGCAA+AGG | - | chr4.3:48460354-48460373 | None:intergenic | 50.0% | |
| TACGATGGTCAAGGTTCTCG+TGG | - | chr4.3:48461777-48461796 | None:intergenic | 50.0% | |
| TCAAAGTAGACCAGGGTTGG+AGG | + | chr4.3:48460602-48460621 | MS.gene66674:CDS | 50.0% | |
| TGGTTCAACACCACAAGGGT+AGG | + | chr4.3:48462215-48462234 | MS.gene66674:CDS | 50.0% | |
| TGGTTGTTCCGTGGCTCATT+AGG | - | chr4.3:48461827-48461846 | None:intergenic | 50.0% | |
| TTGGCATCCGTCAGAACTGT+TGG | - | chr4.3:48461484-48461503 | None:intergenic | 50.0% | |
| ! | CTCTGAAAGTGGGATTGCTG+TGG | + | chr4.3:48462252-48462271 | MS.gene66674:CDS | 50.0% |
| ! | GAGAGTTAGTTTGGGGTGTG+AGG | - | chr4.3:48462041-48462060 | None:intergenic | 50.0% |
| ! | GGGAAAAAGGGCATACGAAC+AGG | + | chr4.3:48458803-48458822 | MS.gene66674:CDS | 50.0% |
| ! | GTCCTGACCAACAGTTCTGA+CGG | + | chr4.3:48461474-48461493 | MS.gene66674:intron | 50.0% |
| ! | TCCGGCTTTTGTGAGTTCTG+TGG | + | chr4.3:48459142-48459161 | MS.gene66674:intron | 50.0% |
| ! | TTTTGCAACACCTCCAACCC+TGG | - | chr4.3:48460615-48460634 | None:intergenic | 50.0% |
| !! | CATGCAGGGTACTGTGTCTA+TGG | - | chr4.3:48461154-48461173 | None:intergenic | 50.0% |
| !! | CCAAGTAGTCGGCTTGCATA+AGG | + | chr4.3:48459098-48459117 | MS.gene66674:intron | 50.0% |
| AAAGCCCTTGCTGCAGAAGG+AGG | + | chr4.3:48462184-48462203 | MS.gene66674:CDS | 55.0% | |
| AAGTGGGATTGCTGTGGGCT+CGG | + | chr4.3:48462258-48462277 | MS.gene66674:CDS | 55.0% | |
| CCATCCTCCTTCTGCAGCAA+GGG | - | chr4.3:48462191-48462210 | None:intergenic | 55.0% | |
| GACGGTGGTTCAACACCACA+AGG | + | chr4.3:48462210-48462229 | MS.gene66674:CDS | 55.0% | |
| GGCCATTGCTCCAGCAACAA+TGG | + | chr4.3:48461682-48461701 | MS.gene66674:intron | 55.0% | |
| GGCCATTGTTGCTGGAGCAA+TGG | - | chr4.3:48461687-48461706 | None:intergenic | 55.0% | |
| TCCATCCTCCTTCTGCAGCA+AGG | - | chr4.3:48462192-48462211 | None:intergenic | 55.0% | |
| TGCAGCAGTTGAGAGCTGCT+AGG | + | chr4.3:48463039-48463058 | MS.gene66674:CDS | 55.0% | |
| TGCTGCAGAAGGAGGATGGA+CGG | + | chr4.3:48462192-48462211 | MS.gene66674:CDS | 55.0% | |
| !! | GTGAGTTGATGACAGTGGCG+TGG | + | chr4.3:48459437-48459456 | MS.gene66674:intron | 55.0% |
| !! | TGTTGCCGTGGGAGAGTACT+AGG | - | chr4.3:48462001-48462020 | None:intergenic | 55.0% |
| CCCTTGCTGCAGAAGGAGGA+TGG | + | chr4.3:48462188-48462207 | MS.gene66674:CDS | 60.0% | |
| TGCAGAAGGAGGATGGACGG+TGG | + | chr4.3:48462195-48462214 | MS.gene66674:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 48458788 | 48463079 | 48458788 | ID=MS.gene66674 |
| chr4.3 | mRNA | 48458788 | 48463079 | 48458788 | ID=MS.gene66674.t1;Parent=MS.gene66674 |
| chr4.3 | exon | 48458788 | 48459010 | 48458788 | ID=MS.gene66674.t1.exon1;Parent=MS.gene66674.t1 |
| chr4.3 | CDS | 48458788 | 48459010 | 48458788 | ID=cds.MS.gene66674.t1;Parent=MS.gene66674.t1 |
| chr4.3 | exon | 48459302 | 48459436 | 48459302 | ID=MS.gene66674.t1.exon2;Parent=MS.gene66674.t1 |
| chr4.3 | CDS | 48459302 | 48459436 | 48459302 | ID=cds.MS.gene66674.t1;Parent=MS.gene66674.t1 |
| chr4.3 | exon | 48459577 | 48459708 | 48459577 | ID=MS.gene66674.t1.exon3;Parent=MS.gene66674.t1 |
| chr4.3 | CDS | 48459577 | 48459708 | 48459577 | ID=cds.MS.gene66674.t1;Parent=MS.gene66674.t1 |
| chr4.3 | exon | 48459802 | 48459894 | 48459802 | ID=MS.gene66674.t1.exon4;Parent=MS.gene66674.t1 |
| chr4.3 | CDS | 48459802 | 48459894 | 48459802 | ID=cds.MS.gene66674.t1;Parent=MS.gene66674.t1 |
| chr4.3 | exon | 48459976 | 48460107 | 48459976 | ID=MS.gene66674.t1.exon5;Parent=MS.gene66674.t1 |
| chr4.3 | CDS | 48459976 | 48460107 | 48459976 | ID=cds.MS.gene66674.t1;Parent=MS.gene66674.t1 |
| chr4.3 | exon | 48460583 | 48460680 | 48460583 | ID=MS.gene66674.t1.exon6;Parent=MS.gene66674.t1 |
| chr4.3 | CDS | 48460583 | 48460680 | 48460583 | ID=cds.MS.gene66674.t1;Parent=MS.gene66674.t1 |
| chr4.3 | exon | 48462169 | 48462379 | 48462169 | ID=MS.gene66674.t1.exon7;Parent=MS.gene66674.t1 |
| chr4.3 | CDS | 48462169 | 48462379 | 48462169 | ID=cds.MS.gene66674.t1;Parent=MS.gene66674.t1 |
| chr4.3 | exon | 48462994 | 48463079 | 48462994 | ID=MS.gene66674.t1.exon8;Parent=MS.gene66674.t1 |
| chr4.3 | CDS | 48462994 | 48463079 | 48462994 | ID=cds.MS.gene66674.t1;Parent=MS.gene66674.t1 |
| Gene Sequence |
| Protein sequence |
