Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050439.t1 | NP_001341006.1 | 100 | 181 | 0 | 0 | 1 | 181 | 1 | 181 | 8.10E-98 | 366.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050439.t1 | O48920 | 99.4 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 5.7e-100 | 364.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050439.t1 | A0A5D2G2X1 | 100.0 | 181 | 0 | 0 | 1 | 181 | 1 | 181 | 5.9e-98 | 366.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene050439 | 0.817959 | 2.52E-52 | -1.69E-46 |
| MS.gene049178 | MS.gene050439 | 0.826584 | 2.50E-54 | -1.69E-46 |
| MS.gene050114 | MS.gene050439 | 0.821715 | 3.48E-53 | -1.69E-46 |
| MS.gene050439 | MS.gene051490 | 0.803416 | 3.52E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene055311 | 0.813561 | 2.40E-51 | -1.69E-46 |
| MS.gene050439 | MS.gene055313 | 0.836741 | 7.83E-57 | -1.69E-46 |
| MS.gene050439 | MS.gene055314 | 0.804415 | 2.18E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene055469 | 0.810047 | 1.40E-50 | -1.69E-46 |
| MS.gene050439 | MS.gene055513 | 0.806772 | 6.99E-50 | -1.69E-46 |
| MS.gene050439 | MS.gene055603 | 0.809921 | 1.49E-50 | -1.69E-46 |
| MS.gene050439 | MS.gene057360 | 0.847744 | 9.53E-60 | -1.69E-46 |
| MS.gene050439 | MS.gene058543 | 0.807974 | 3.89E-50 | -1.69E-46 |
| MS.gene050439 | MS.gene058639 | 0.801607 | 8.32E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene058852 | 0.803657 | 3.14E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene059171 | 0.805466 | 1.32E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene059774 | 0.802853 | 4.61E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene060637 | 0.810919 | 9.07E-51 | -1.69E-46 |
| MS.gene050439 | MS.gene060697 | 0.80518 | 1.51E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene060870 | 0.801342 | 9.42E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene06133 | 0.820141 | 8.02E-53 | -1.69E-46 |
| MS.gene050439 | MS.gene061966 | 0.816791 | 4.61E-52 | -1.69E-46 |
| MS.gene050439 | MS.gene063132 | 0.801435 | 9.02E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene06322 | 0.825264 | 5.15E-54 | -1.69E-46 |
| MS.gene050439 | MS.gene06324 | 0.839978 | 1.15E-57 | -1.69E-46 |
| MS.gene050439 | MS.gene063275 | 0.804254 | 2.36E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene065159 | 0.803005 | 4.29E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene066033 | 0.809172 | 2.16E-50 | -1.69E-46 |
| MS.gene050439 | MS.gene066683 | 0.806197 | 9.24E-50 | -1.69E-46 |
| MS.gene050439 | MS.gene069002 | 0.801909 | 7.21E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene07038 | 0.810992 | 8.75E-51 | -1.69E-46 |
| MS.gene050439 | MS.gene07088 | 0.913979 | 3.28E-84 | -1.69E-46 |
| MS.gene050439 | MS.gene072116 | 0.811663 | 6.26E-51 | -1.69E-46 |
| MS.gene050439 | MS.gene072455 | 0.824515 | 7.74E-54 | -1.69E-46 |
| MS.gene050439 | MS.gene072672 | 0.947987 | 2.30E-106 | -1.69E-46 |
| MS.gene050439 | MS.gene072709 | 0.821142 | 4.72E-53 | -1.69E-46 |
| MS.gene050439 | MS.gene07281 | 0.802756 | 4.82E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene07339 | 0.805256 | 1.46E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene07372 | 0.814923 | 1.20E-51 | -1.69E-46 |
| MS.gene050439 | MS.gene074435 | 0.818294 | 2.11E-52 | -1.69E-46 |
| MS.gene050439 | MS.gene07608 | 0.82973 | 4.37E-55 | -1.69E-46 |
| MS.gene050439 | MS.gene20621 | 0.82698 | 2.01E-54 | -1.69E-46 |
| MS.gene050439 | MS.gene20886 | 0.816605 | 5.07E-52 | -1.69E-46 |
| MS.gene050439 | MS.gene22119 | 0.801658 | 8.12E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene22177 | 0.818138 | 2.29E-52 | -1.69E-46 |
| MS.gene050439 | MS.gene23013 | 0.826473 | 2.66E-54 | -1.69E-46 |
| MS.gene050439 | MS.gene23078 | 0.814093 | 1.84E-51 | -1.69E-46 |
| MS.gene050439 | MS.gene23697 | 0.802305 | 5.98E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene23963 | 0.812438 | 4.24E-51 | -1.69E-46 |
| MS.gene050439 | MS.gene25707 | 0.808789 | 2.61E-50 | -1.69E-46 |
| MS.gene050439 | MS.gene26488 | 0.830077 | 3.60E-55 | -1.69E-46 |
| MS.gene050439 | MS.gene27073 | 0.835495 | 1.62E-56 | -1.69E-46 |
| MS.gene050439 | MS.gene27700 | 0.805725 | 1.16E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene28159 | 0.803215 | 3.88E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene28798 | 0.808719 | 2.70E-50 | -1.69E-46 |
| MS.gene050439 | MS.gene28840 | 0.994193 | 2.73E-205 | -1.69E-46 |
| MS.gene050439 | MS.gene30419 | 0.827414 | 1.59E-54 | -1.69E-46 |
| MS.gene050439 | MS.gene31667 | 0.800282 | 1.55E-48 | -1.69E-46 |
| MS.gene050439 | MS.gene32181 | 0.800346 | 1.50E-48 | -1.69E-46 |
| MS.gene050439 | MS.gene32555 | 0.804142 | 2.49E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene32589 | 0.80241 | 5.68E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene32685 | 0.809734 | 1.63E-50 | -1.69E-46 |
| MS.gene050439 | MS.gene33185 | 0.804923 | 1.71E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene34011 | 0.801979 | 6.97E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene34485 | 0.808701 | 2.72E-50 | -1.69E-46 |
| MS.gene050439 | MS.gene37653 | 0.802033 | 6.80E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene37876 | 0.838485 | 2.80E-57 | -1.69E-46 |
| MS.gene050439 | MS.gene38382 | 0.801677 | 8.04E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene39860 | 0.80445 | 2.15E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene40330 | 0.807085 | 6.00E-50 | -1.69E-46 |
| MS.gene050439 | MS.gene40918 | 0.800331 | 1.52E-48 | -1.69E-46 |
| MS.gene050439 | MS.gene40969 | 0.826365 | 2.82E-54 | -1.69E-46 |
| MS.gene050439 | MS.gene41427 | 0.800983 | 1.12E-48 | -1.69E-46 |
| MS.gene050439 | MS.gene41630 | 0.831352 | 1.75E-55 | -1.69E-46 |
| MS.gene050439 | MS.gene41678 | 0.80157 | 8.46E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene42128 | 0.817307 | 3.53E-52 | -1.69E-46 |
| MS.gene050439 | MS.gene42649 | 0.818435 | 1.96E-52 | -1.69E-46 |
| MS.gene050439 | MS.gene43202 | 0.815059 | 1.12E-51 | -1.69E-46 |
| MS.gene050439 | MS.gene44001 | 0.803184 | 3.94E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene44326 | 0.812721 | 3.68E-51 | -1.69E-46 |
| MS.gene050439 | MS.gene45624 | 0.817082 | 3.97E-52 | -1.69E-46 |
| MS.gene050439 | MS.gene47554 | 0.806615 | 7.55E-50 | -1.69E-46 |
| MS.gene050439 | MS.gene47822 | 0.832611 | 8.57E-56 | -1.69E-46 |
| MS.gene050439 | MS.gene48283 | 0.814878 | 1.23E-51 | -1.69E-46 |
| MS.gene050439 | MS.gene49772 | 0.809555 | 1.79E-50 | -1.69E-46 |
| MS.gene050439 | MS.gene50365 | 0.80639 | 8.42E-50 | -1.69E-46 |
| MS.gene050439 | MS.gene52272 | 0.824416 | 8.17E-54 | -1.69E-46 |
| MS.gene050439 | MS.gene52973 | 0.803454 | 3.46E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene54280 | 0.803132 | 4.03E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene54537 | 0.822767 | 1.99E-53 | -1.69E-46 |
| MS.gene050439 | MS.gene54766 | 0.83374 | 4.48E-56 | -1.69E-46 |
| MS.gene050439 | MS.gene55870 | 0.801705 | 7.94E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene58358 | 0.802578 | 5.25E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene58579 | 0.818627 | 1.78E-52 | -1.69E-46 |
| MS.gene050439 | MS.gene60120 | 0.805715 | 1.17E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene60163 | 0.801028 | 1.09E-48 | -1.69E-46 |
| MS.gene050439 | MS.gene60265 | 0.807525 | 4.84E-50 | -1.69E-46 |
| MS.gene050439 | MS.gene61288 | 0.819405 | 1.18E-52 | -1.69E-46 |
| MS.gene050439 | MS.gene61682 | 0.818564 | 1.84E-52 | -1.69E-46 |
| MS.gene050439 | MS.gene61768 | 0.806125 | 9.57E-50 | -1.69E-46 |
| MS.gene050439 | MS.gene62501 | 0.801685 | 8.01E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene64023 | 0.802084 | 6.64E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene64024 | 0.803119 | 4.06E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene64225 | 0.802862 | 4.59E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene65300 | 0.805367 | 1.38E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene66674 | 0.800651 | 1.30E-48 | -1.69E-46 |
| MS.gene050439 | MS.gene67107 | 0.822747 | 2.01E-53 | -1.69E-46 |
| MS.gene050439 | MS.gene67141 | 0.823026 | 1.73E-53 | -1.69E-46 |
| MS.gene050439 | MS.gene67553 | 0.811241 | 7.72E-51 | -1.69E-46 |
| MS.gene050439 | MS.gene68115 | 0.822039 | 2.93E-53 | -1.69E-46 |
| MS.gene050439 | MS.gene68718 | 0.801204 | 1.01E-48 | -1.69E-46 |
| MS.gene050439 | MS.gene68783 | 0.80302 | 4.26E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene69934 | 0.822577 | 2.20E-53 | -1.69E-46 |
| MS.gene050439 | MS.gene70112 | 0.808209 | 3.47E-50 | -1.69E-46 |
| MS.gene050439 | MS.gene70282 | 0.837836 | 4.11E-57 | -1.69E-46 |
| MS.gene050439 | MS.gene71879 | 0.810098 | 1.36E-50 | -1.69E-46 |
| MS.gene050439 | MS.gene71988 | 0.812899 | 3.36E-51 | -1.69E-46 |
| MS.gene050439 | MS.gene72621 | 0.80462 | 1.98E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene73340 | 0.800905 | 1.16E-48 | -1.69E-46 |
| MS.gene050439 | MS.gene74900 | 0.856072 | 4.12E-62 | -1.69E-46 |
| MS.gene050439 | MS.gene75185 | 0.804961 | 1.68E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene75412 | 0.844854 | 5.84E-59 | -1.69E-46 |
| MS.gene050439 | MS.gene75413 | 0.802671 | 5.02E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene75781 | 0.8515 | 8.52E-61 | -1.69E-46 |
| MS.gene050439 | MS.gene76440 | 0.821128 | 4.76E-53 | -1.69E-46 |
| MS.gene050439 | MS.gene77647 | 0.802329 | 5.91E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene77759 | 0.82103 | 5.01E-53 | -1.69E-46 |
| MS.gene050439 | MS.gene78829 | 0.804814 | 1.80E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene79280 | 0.810312 | 1.23E-50 | -1.69E-46 |
| MS.gene050439 | MS.gene79466 | 0.816527 | 5.28E-52 | -1.69E-46 |
| MS.gene050439 | MS.gene81768 | 0.830286 | 3.20E-55 | -1.69E-46 |
| MS.gene050439 | MS.gene81831 | 0.810195 | 1.30E-50 | -1.69E-46 |
| MS.gene050439 | MS.gene82600 | 0.818449 | 1.95E-52 | -1.69E-46 |
| MS.gene050439 | MS.gene87972 | 0.840148 | 1.03E-57 | -1.69E-46 |
| MS.gene050439 | MS.gene88450 | 0.82083 | 5.58E-53 | -1.69E-46 |
| MS.gene050439 | MS.gene88594 | 0.803162 | 3.98E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene91116 | 0.808643 | 2.80E-50 | -1.69E-46 |
| MS.gene050439 | MS.gene92186 | 0.842734 | 2.16E-58 | -1.69E-46 |
| MS.gene050439 | MS.gene93985 | 0.811394 | 7.16E-51 | -1.69E-46 |
| MS.gene050439 | MS.gene98848 | 0.807545 | 4.80E-50 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050439.t1 | MTR_7g109960 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 4.29e-135 | 375 |
| MS.gene050439.t1 | MTR_6g005820 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 5.83e-135 | 374 |
| MS.gene050439.t1 | MTR_1g086480 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 9.77e-135 | 374 |
| MS.gene050439.t1 | MTR_5g034130 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 2.65e-134 | 373 |
| MS.gene050439.t1 | MTR_5g034125 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 2.65e-134 | 373 |
| MS.gene050439.t1 | MTR_5g016540 | 86.111 | 180 | 25 | 0 | 1 | 180 | 1 | 180 | 2.07e-119 | 335 |
| MS.gene050439.t1 | MTR_4g128910 | 63.128 | 179 | 66 | 0 | 1 | 179 | 1 | 179 | 1.71e-84 | 247 |
| MS.gene050439.t1 | MTR_5g007810 | 61.582 | 177 | 68 | 0 | 1 | 177 | 1 | 177 | 6.89e-83 | 243 |
| MS.gene050439.t1 | MTR_4g077640 | 60.452 | 177 | 70 | 0 | 1 | 177 | 1 | 177 | 1.17e-80 | 238 |
| MS.gene050439.t1 | MTR_5g007820 | 55.495 | 182 | 79 | 1 | 1 | 180 | 1 | 182 | 9.18e-76 | 225 |
| MS.gene050439.t1 | MTR_1g076550 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 1.62e-67 | 204 |
| MS.gene050439.t1 | MTR_5g007840 | 42.723 | 213 | 77 | 2 | 1 | 180 | 1 | 201 | 2.24e-57 | 179 |
| MS.gene050439.t1 | MTR_8g077540 | 49.091 | 165 | 81 | 3 | 18 | 180 | 17 | 180 | 2.83e-50 | 160 |
| MS.gene050439.t1 | MTR_8g077540 | 49.091 | 165 | 81 | 3 | 18 | 180 | 43 | 206 | 4.76e-50 | 160 |
| MS.gene050439.t1 | MTR_2g022200 | 34.831 | 178 | 105 | 2 | 5 | 173 | 5 | 180 | 4.60e-37 | 127 |
| MS.gene050439.t1 | MTR_5g078090 | 34.659 | 176 | 112 | 2 | 1 | 173 | 1 | 176 | 4.00e-31 | 111 |
| MS.gene050439.t1 | MTR_5g015370 | 32.609 | 184 | 121 | 2 | 1 | 181 | 1 | 184 | 1.39e-30 | 110 |
| MS.gene050439.t1 | MTR_8g077540 | 51.020 | 98 | 46 | 2 | 18 | 114 | 17 | 113 | 1.57e-28 | 103 |
| MS.gene050439.t1 | MTR_4g026950 | 31.707 | 164 | 111 | 1 | 18 | 180 | 1 | 164 | 2.22e-26 | 99.0 |
| MS.gene050439.t1 | MTR_2g034640 | 31.638 | 177 | 105 | 2 | 15 | 177 | 18 | 192 | 1.12e-24 | 95.1 |
| MS.gene050439.t1 | MTR_7g112090 | 31.073 | 177 | 106 | 2 | 15 | 177 | 18 | 192 | 3.22e-24 | 94.0 |
| MS.gene050439.t1 | MTR_4g121860 | 31.638 | 177 | 105 | 2 | 15 | 177 | 18 | 192 | 7.47e-23 | 90.5 |
| MS.gene050439.t1 | MTR_1g062760 | 34.118 | 85 | 52 | 1 | 18 | 98 | 15 | 99 | 2.87e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050439.t1 | AT1G10630 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 8.87e-135 | 374 |
| MS.gene050439.t1 | AT1G10630 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 8.87e-135 | 374 |
| MS.gene050439.t1 | AT2G47170 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 2.23e-134 | 373 |
| MS.gene050439.t1 | AT2G47170 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 2.23e-134 | 373 |
| MS.gene050439.t1 | AT2G47170 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 2.23e-134 | 373 |
| MS.gene050439.t1 | AT5G14670 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 2.78e-134 | 373 |
| MS.gene050439.t1 | AT5G14670 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 2.78e-134 | 373 |
| MS.gene050439.t1 | AT1G70490 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 6.06e-134 | 372 |
| MS.gene050439.t1 | AT1G70490 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 6.06e-134 | 372 |
| MS.gene050439.t1 | AT1G70490 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 6.06e-134 | 372 |
| MS.gene050439.t1 | AT1G70490 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 6.06e-134 | 372 |
| MS.gene050439.t1 | AT1G70490 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 6.06e-134 | 372 |
| MS.gene050439.t1 | AT1G70490 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 6.06e-134 | 372 |
| MS.gene050439.t1 | AT1G23490 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 6.06e-134 | 372 |
| MS.gene050439.t1 | AT1G70490 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 6.06e-134 | 372 |
| MS.gene050439.t1 | AT5G14670 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 2.46e-133 | 370 |
| MS.gene050439.t1 | AT3G62290 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 3.04e-133 | 370 |
| MS.gene050439.t1 | AT3G62290 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 3.04e-133 | 370 |
| MS.gene050439.t1 | AT3G62290 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 3.04e-133 | 370 |
| MS.gene050439.t1 | AT2G15310 | 66.851 | 181 | 60 | 0 | 1 | 181 | 1 | 181 | 1.94e-90 | 263 |
| MS.gene050439.t1 | AT2G24765 | 62.011 | 179 | 68 | 0 | 1 | 179 | 1 | 179 | 5.73e-85 | 248 |
| MS.gene050439.t1 | AT5G17060 | 59.322 | 177 | 72 | 0 | 1 | 177 | 1 | 177 | 2.40e-81 | 239 |
| MS.gene050439.t1 | AT5G17060 | 59.322 | 177 | 72 | 0 | 1 | 177 | 1 | 177 | 2.40e-81 | 239 |
| MS.gene050439.t1 | AT3G03120 | 59.887 | 177 | 71 | 0 | 1 | 177 | 1 | 177 | 1.05e-80 | 238 |
| MS.gene050439.t1 | AT3G22950 | 53.039 | 181 | 85 | 0 | 1 | 181 | 1 | 181 | 1.11e-70 | 212 |
| MS.gene050439.t1 | AT3G22950 | 53.039 | 181 | 85 | 0 | 1 | 181 | 1 | 181 | 1.11e-70 | 212 |
| MS.gene050439.t1 | AT2G24765 | 64.844 | 128 | 45 | 0 | 1 | 128 | 1 | 128 | 1.36e-60 | 185 |
| MS.gene050439.t1 | AT3G03120 | 62.308 | 130 | 49 | 0 | 1 | 130 | 1 | 130 | 1.12e-59 | 182 |
| MS.gene050439.t1 | AT1G02430 | 48.936 | 188 | 82 | 5 | 1 | 176 | 1 | 186 | 6.85e-57 | 177 |
| MS.gene050439.t1 | AT1G02440 | 45.699 | 186 | 91 | 4 | 1 | 176 | 1 | 186 | 2.32e-55 | 173 |
| MS.gene050439.t1 | AT2G18390 | 49.091 | 165 | 81 | 3 | 18 | 180 | 17 | 180 | 1.06e-49 | 159 |
| MS.gene050439.t1 | AT1G02430 | 47.205 | 161 | 75 | 4 | 1 | 153 | 1 | 159 | 3.51e-45 | 147 |
| MS.gene050439.t1 | AT5G52210 | 34.091 | 176 | 109 | 1 | 5 | 173 | 5 | 180 | 6.50e-36 | 124 |
| MS.gene050439.t1 | AT5G52210 | 34.091 | 176 | 109 | 1 | 5 | 173 | 5 | 180 | 6.50e-36 | 124 |
| MS.gene050439.t1 | AT3G49870 | 33.880 | 183 | 118 | 2 | 1 | 180 | 1 | 183 | 7.32e-33 | 116 |
| MS.gene050439.t1 | AT5G67560 | 33.742 | 163 | 107 | 1 | 12 | 173 | 14 | 176 | 2.31e-31 | 112 |
| MS.gene050439.t1 | AT5G37680 | 33.523 | 176 | 114 | 2 | 1 | 173 | 1 | 176 | 1.85e-30 | 110 |
| MS.gene050439.t1 | AT3G49870 | 32.927 | 164 | 109 | 1 | 18 | 180 | 1 | 164 | 1.71e-29 | 107 |
| MS.gene050439.t1 | AT3G49860 | 33.133 | 166 | 110 | 1 | 16 | 180 | 10 | 175 | 7.02e-29 | 105 |
| MS.gene050439.t1 | AT1G02440 | 33.117 | 154 | 67 | 3 | 1 | 153 | 1 | 119 | 3.32e-26 | 97.4 |
| MS.gene050439.t1 | AT1G09180 | 32.961 | 179 | 104 | 2 | 13 | 177 | 16 | 192 | 3.66e-25 | 96.7 |
| MS.gene050439.t1 | AT3G62560 | 31.638 | 177 | 105 | 2 | 15 | 177 | 18 | 192 | 1.44e-24 | 95.1 |
| MS.gene050439.t1 | AT5G37680 | 32.812 | 128 | 86 | 0 | 46 | 173 | 2 | 129 | 4.18e-24 | 92.4 |
| MS.gene050439.t1 | AT1G56330 | 31.638 | 177 | 105 | 2 | 15 | 177 | 18 | 192 | 5.75e-24 | 93.6 |
| MS.gene050439.t1 | AT4G02080 | 31.073 | 177 | 106 | 2 | 15 | 177 | 18 | 192 | 6.33e-24 | 93.6 |
Find 45 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATTAGATCCGTCCTTTA+TGG | 0.101427 | 7.1:+4620476 | MS.gene050439:intron |
| TTTCCTTCTTCGCAAATAAC+CGG | 0.361975 | 7.1:-4617926 | None:intergenic |
| TGAAAGTAATGTCTCCATAA+AGG | 0.367407 | 7.1:-4620490 | None:intergenic |
| GAAGGAAATGCGTATACTTA+TGG | 0.381963 | 7.1:+4617941 | MS.gene050439:CDS |
| TCAGCAGCATTCATAGCATT+TGG | 0.385055 | 7.1:-4620760 | None:intergenic |
| CAGCCGGTTATTTGCGAAGA+AGG | 0.398980 | 7.1:+4617923 | MS.gene050439:CDS |
| CAGAGGTAGCACATGTGCTC+TGG | 0.443544 | 7.1:-4620926 | None:intergenic |
| ATTCACTTCGTCAGCGTCAC+TGG | 0.458451 | 7.1:+4620806 | MS.gene050439:CDS |
| AGCTTTACTGTGTGGGATGT+TGG | 0.474274 | 7.1:+4618482 | MS.gene050439:CDS |
| CTCAAACAACATTGCAAGCA+AGG | 0.495880 | 7.1:+4620980 | MS.gene050439:CDS |
| ATTCTCTATAAGCTCAAGCT+TGG | 0.498460 | 7.1:+4617993 | MS.gene050439:CDS |
| GTCACCACCATTCCCACCAT+TGG | 0.507944 | 7.1:+4618023 | MS.gene050439:CDS |
| ATTGTAAAACTTACCAATGG+TGG | 0.508835 | 7.1:-4618036 | None:intergenic |
| AAGCTAGGGACGAGCTGCAC+AGG | 0.511385 | 7.1:+4620569 | MS.gene050439:CDS |
| TGTGTGGGATGTTGGTGGCC+AGG | 0.523027 | 7.1:+4618490 | MS.gene050439:CDS |
| CAGAGCACATGTGCTACCTC+TGG | 0.523931 | 7.1:+4620927 | MS.gene050439:CDS |
| AAGCTTGAGCTTATAGAGAA+TGG | 0.532263 | 7.1:-4617991 | None:intergenic |
| GAACATTAGCTTTACTGTGT+GGG | 0.534133 | 7.1:+4618475 | MS.gene050439:CDS |
| TTTACTGTGTGGGATGTTGG+TGG | 0.540094 | 7.1:+4618485 | MS.gene050439:CDS |
| AAATAACCGGCTGAATAGCT+TGG | 0.543563 | 7.1:-4617913 | None:intergenic |
| AATATAGAAATACCTTGTCC+TGG | 0.547425 | 7.1:-4618508 | None:intergenic |
| ATTTGGTGTAGGGTTTAATG+TGG | 0.553247 | 7.1:+4618436 | MS.gene050439:intron |
| GCTGAAATAACTGATAAGCT+AGG | 0.555145 | 7.1:+4620778 | MS.gene050439:CDS |
| AGATCGTGTTGTTGAAGCTA+GGG | 0.564599 | 7.1:+4620555 | MS.gene050439:CDS |
| GGATGTTGGTGGCCAGGACA+AGG | 0.567218 | 7.1:+4618496 | MS.gene050439:CDS |
| AAACTTACCAATGGTGGGAA+TGG | 0.569667 | 7.1:-4618030 | None:intergenic |
| TAGCTTCAACAACACGATCT+CGG | 0.576560 | 7.1:-4620552 | None:intergenic |
| CATTCACCAAGCTATTCAGC+CGG | 0.576922 | 7.1:+4617907 | MS.gene050439:CDS |
| GAGATCGTGTTGTTGAAGCT+AGG | 0.579112 | 7.1:+4620554 | MS.gene050439:CDS |
| ATGGTCGGTCTCGATGCCGC+TGG | 0.579718 | 7.1:+4617960 | MS.gene050439:CDS |
| TTGTAAAACTTACCAATGGT+GGG | 0.580371 | 7.1:-4618035 | None:intergenic |
| CATTACTTTCAAAATACACA+AGG | 0.584201 | 7.1:+4620502 | MS.gene050439:CDS |
| TCTGGTGAAGGACTTTATGA+AGG | 0.585343 | 7.1:+4620945 | MS.gene050439:CDS |
| ACATGTGCTACCTCTGGTGA+AGG | 0.597179 | 7.1:+4620933 | MS.gene050439:CDS |
| GACTTTATGAAGGACTAGAC+TGG | 0.599016 | 7.1:+4620955 | MS.gene050439:CDS |
| AGTAATGTCTCCATAAAGGA+CGG | 0.609070 | 7.1:-4620486 | None:intergenic |
| CTTACCAATGGTGGGAATGG+TGG | 0.612027 | 7.1:-4618027 | None:intergenic |
| AGGGTTTAATGTGGAAACTG+TGG | 0.625050 | 7.1:+4618445 | MS.gene050439:intron |
| TTCATAAAGTCCTTCACCAG+AGG | 0.636014 | 7.1:-4620943 | None:intergenic |
| AGAACATTAGCTTTACTGTG+TGG | 0.640151 | 7.1:+4618474 | MS.gene050439:CDS |
| CTTGAGCTTATAGAGAATGG+TGG | 0.640806 | 7.1:-4617988 | None:intergenic |
| GAAATGCGTATACTTATGGT+CGG | 0.647571 | 7.1:+4617945 | MS.gene050439:CDS |
| ATTACTTTCAAAATACACAA+GGG | 0.655008 | 7.1:+4620503 | MS.gene050439:CDS |
| GAGAATGGTGGTCTTACCAG+CGG | 0.666289 | 7.1:-4617976 | None:intergenic |
| GCTGCACAGGATGTTAAACG+AGG | 0.784396 | 7.1:+4620582 | MS.gene050439:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTCAAAGATAAAAATATA+TGG | - | chr7.1:4620418-4620437 | None:intergenic | 15.0% |
| !! | GATTTACAAATTATGTTATA+AGG | + | chr7.1:4619366-4619385 | MS.gene050439:intron | 15.0% |
| !!! | ATTAAATTTTAATGTGCATT+GGG | - | chr7.1:4620270-4620289 | None:intergenic | 15.0% |
| !! | AACTTTGCAATTTAAATTAC+AGG | + | chr7.1:4621028-4621047 | MS.gene050439:intron | 20.0% |
| !! | ACAGACTATTAACAAATATT+AGG | - | chr7.1:4619936-4619955 | None:intergenic | 20.0% |
| !! | ATTACTTTCAAAATACACAA+GGG | + | chr7.1:4620503-4620522 | MS.gene050439:CDS | 20.0% |
| !! | ATTATAAAACTAGTTACAGT+AGG | + | chr7.1:4618716-4618735 | MS.gene050439:intron | 20.0% |
| !! | CAAAGATAAAAATATATGGT+TGG | - | chr7.1:4620414-4620433 | None:intergenic | 20.0% |
| !! | GAATGTATTATTGATAGAAA+AGG | - | chr7.1:4619593-4619612 | None:intergenic | 20.0% |
| !! | TCAAAACAAAATATGTATCT+TGG | - | chr7.1:4620021-4620040 | None:intergenic | 20.0% |
| !! | TTATACTAAATAGCATATCA+CGG | - | chr7.1:4618871-4618890 | None:intergenic | 20.0% |
| !!! | GATTAAATTTTAATGTGCAT+TGG | - | chr7.1:4620271-4620290 | None:intergenic | 20.0% |
| !!! | TATTTTGTTATTTGTTTTGC+AGG | + | chr7.1:4621079-4621098 | MS.gene050439:intron | 20.0% |
| !!! | TCATTGTTTTTATTTTTGCT+TGG | + | chr7.1:4619869-4619888 | MS.gene050439:intron | 20.0% |
| !!! | TGATTTTCTCAAATTATTAG+TGG | - | chr7.1:4618124-4618143 | None:intergenic | 20.0% |
| !!! | TTTTGATGATATAGATGATT+TGG | + | chr7.1:4618419-4618438 | MS.gene050439:intron | 20.0% |
| ! | AAAAGAGATAAATCTCTCTT+TGG | - | chr7.1:4619450-4619469 | None:intergenic | 25.0% |
| ! | AAATAGGATGATGATTCAAT+GGG | - | chr7.1:4619223-4619242 | None:intergenic | 25.0% |
| ! | AAATGAGTGAAATGACAAAT+AGG | - | chr7.1:4619239-4619258 | None:intergenic | 25.0% |
| ! | AACCATTGTTCTGTTATAAA+AGG | - | chr7.1:4618780-4618799 | None:intergenic | 25.0% |
| ! | AATGAATGAATGTGAGAATT+TGG | + | chr7.1:4620622-4620641 | MS.gene050439:intron | 25.0% |
| ! | ACTCTTATGTTTATGAATGT+TGG | + | chr7.1:4620321-4620340 | MS.gene050439:intron | 25.0% |
| ! | AGATAAAAATATATGGTTGG+AGG | - | chr7.1:4620411-4620430 | None:intergenic | 25.0% |
| ! | ATGTTGTGAAACAATCATTA+AGG | + | chr7.1:4619756-4619775 | MS.gene050439:intron | 25.0% |
| ! | CAATTCCTTTCTATAAACAA+TGG | + | chr7.1:4618055-4618074 | MS.gene050439:intron | 25.0% |
| ! | CATTACCATTGTTTATAGAA+AGG | - | chr7.1:4618063-4618082 | None:intergenic | 25.0% |
| ! | CATTACTTTCAAAATACACA+AGG | + | chr7.1:4620502-4620521 | MS.gene050439:CDS | 25.0% |
| ! | GTAATGATAATTATGAAGCA+CGG | + | chr7.1:4618077-4618096 | MS.gene050439:intron | 25.0% |
| ! | GTTCTATCGTAAACTATAAT+TGG | - | chr7.1:4619784-4619803 | None:intergenic | 25.0% |
| ! | TAGTTTACGATAGAACATTA+TGG | + | chr7.1:4619788-4619807 | MS.gene050439:intron | 25.0% |
| ! | TCAAATATTAGAAGCTATAG+TGG | + | chr7.1:4618898-4618917 | MS.gene050439:intron | 25.0% |
| ! | TCTATGGTTATAATATTGTC+AGG | + | chr7.1:4620687-4620706 | MS.gene050439:intron | 25.0% |
| ! | TTATACCAAATAGCATATCA+CGG | - | chr7.1:4618976-4618995 | None:intergenic | 25.0% |
| !! | ATTTAGATTTTATCCCAGAT+AGG | - | chr7.1:4619687-4619706 | None:intergenic | 25.0% |
| !! | CTAAATTATGTCAAACCTTT+TGG | + | chr7.1:4620833-4620852 | MS.gene050439:intron | 25.0% |
| !! | CTATATTTGTGTGTATGTTT+TGG | + | chr7.1:4618524-4618543 | MS.gene050439:intron | 25.0% |
| !! | TAATAAGAAAAGCATATCGA+TGG | - | chr7.1:4620463-4620482 | None:intergenic | 25.0% |
| !! | TATTAGTTTCATTCCTATCT+GGG | + | chr7.1:4619671-4619690 | MS.gene050439:intron | 25.0% |
| !! | TGATTTTATGATATGACGAT+TGG | + | chr7.1:4618596-4618615 | MS.gene050439:intron | 25.0% |
| !!! | CACATGACTTGTTAAAATTA+TGG | + | chr7.1:4620227-4620246 | MS.gene050439:intron | 25.0% |
| !!! | GCTACTCTGTTTTTATTTAT+GGG | + | chr7.1:4618633-4618652 | MS.gene050439:intron | 25.0% |
| !!! | TTCGCTTGTTATCTTAATTT+TGG | + | chr7.1:4619610-4619629 | MS.gene050439:intron | 25.0% |
| AAACCAGATACAATCTGAAA+AGG | + | chr7.1:4618332-4618351 | MS.gene050439:intron | 30.0% | |
| AACCAGATACAATCTGAAAA+GGG | + | chr7.1:4618333-4618352 | MS.gene050439:intron | 30.0% | |
| AAGATGCCTATGTGTATAAT+TGG | - | chr7.1:4620299-4620318 | None:intergenic | 30.0% | |
| AATATAGAAATACCTTGTCC+TGG | - | chr7.1:4618511-4618530 | None:intergenic | 30.0% | |
| AATCATTATCCAACTAAGTG+GGG | - | chr7.1:4619837-4619856 | None:intergenic | 30.0% | |
| AATTGGAAAATGGAGGAAAT+TGG | + | chr7.1:4619332-4619351 | MS.gene050439:intron | 30.0% | |
| AGAAAGCAATCAGAAAATCA+AGG | - | chr7.1:4620670-4620689 | None:intergenic | 30.0% | |
| AGGATTCAAATTGAGAAGTA+TGG | + | chr7.1:4619286-4619305 | MS.gene050439:intron | 30.0% | |
| AGTGATTGTAGTGTCAATTA+AGG | + | chr7.1:4620149-4620168 | MS.gene050439:intron | 30.0% | |
| ATAGAACAAGTAGATGAGAA+TGG | - | chr7.1:4620892-4620911 | None:intergenic | 30.0% | |
| ATTCTCACATTCATTCATTG+AGG | - | chr7.1:4620621-4620640 | None:intergenic | 30.0% | |
| ATTGGAAAATGGAGGAAATT+GGG | + | chr7.1:4619333-4619352 | MS.gene050439:intron | 30.0% | |
| ATTGTAAAACTTACCAATGG+TGG | - | chr7.1:4618039-4618058 | None:intergenic | 30.0% | |
| CAAACATGCTAGAATTTACT+AGG | + | chr7.1:4619959-4619978 | MS.gene050439:intron | 30.0% | |
| CAAATAGGATGATGATTCAA+TGG | - | chr7.1:4619224-4619243 | None:intergenic | 30.0% | |
| CAATCAGAAAATCAAGGTAT+AGG | - | chr7.1:4620664-4620683 | None:intergenic | 30.0% | |
| CAATCATTATCCAACTAAGT+GGG | - | chr7.1:4619838-4619857 | None:intergenic | 30.0% | |
| CATTGTTCTGTTATAAAAGG+TGG | - | chr7.1:4618777-4618796 | None:intergenic | 30.0% | |
| CCTAAACCAATTATACACAT+AGG | + | chr7.1:4620290-4620309 | MS.gene050439:intron | 30.0% | |
| CTAGTAAATTCTAGCATGTT+TGG | - | chr7.1:4619961-4619980 | None:intergenic | 30.0% | |
| CTTTGCTTATAATAGTGACT+GGG | - | chr7.1:4618256-4618275 | None:intergenic | 30.0% | |
| GGAATTGTAAAACTTACCAA+TGG | - | chr7.1:4618042-4618061 | None:intergenic | 30.0% | |
| TAGAACATTATGGCGTAATT+TGG | + | chr7.1:4619798-4619817 | MS.gene050439:intron | 30.0% | |
| TAGAGGTGAAATGAAAGATA+AGG | + | chr7.1:4618666-4618685 | MS.gene050439:intron | 30.0% | |
| TAGATCAAAACTAAGCACTA+TGG | - | chr7.1:4620122-4620141 | None:intergenic | 30.0% | |
| TAGGAATGAAACTAATAGCA+AGG | - | chr7.1:4619668-4619687 | None:intergenic | 30.0% | |
| TCTTTGCTTATAATAGTGAC+TGG | - | chr7.1:4618257-4618276 | None:intergenic | 30.0% | |
| TGAAAGTAATGTCTCCATAA+AGG | - | chr7.1:4620493-4620512 | None:intergenic | 30.0% | |
| TTAGTTGGATAATGATTGGT+TGG | + | chr7.1:4619840-4619859 | MS.gene050439:intron | 30.0% | |
| TTATGTTTATGAATGTTGGC+TGG | + | chr7.1:4620325-4620344 | MS.gene050439:intron | 30.0% | |
| TTGTAAAACTTACCAATGGT+GGG | - | chr7.1:4618038-4618057 | None:intergenic | 30.0% | |
| TTTGCTTATAATAGTGACTG+GGG | - | chr7.1:4618255-4618274 | None:intergenic | 30.0% | |
| ! | AGCCTAAAACTAACGATTTT+GGG | - | chr7.1:4619710-4619729 | None:intergenic | 30.0% |
| ! | ATATGACGATTGGTTGAAAT+TGG | + | chr7.1:4618606-4618625 | MS.gene050439:intron | 30.0% |
| ! | CACCTTTTATAACAGAACAA+TGG | + | chr7.1:4618775-4618794 | MS.gene050439:intron | 30.0% |
| ! | CCTATGTGTATAATTGGTTT+AGG | - | chr7.1:4620293-4620312 | None:intergenic | 30.0% |
| ! | CTATTAGTTTCATTCCTATC+TGG | + | chr7.1:4619670-4619689 | MS.gene050439:intron | 30.0% |
| ! | CTTTTCTGTTAGAACTGTAA+AGG | + | chr7.1:4619420-4619439 | MS.gene050439:intron | 30.0% |
| ! | GAGAGATTTATCTCTTTTTG+AGG | + | chr7.1:4619452-4619471 | MS.gene050439:intron | 30.0% |
| ! | GATTTTCTGATTGCTTTCTA+TGG | + | chr7.1:4620671-4620690 | MS.gene050439:intron | 30.0% |
| ! | GGATTCAAATTGAGAAGTAT+GGG | + | chr7.1:4619287-4619306 | MS.gene050439:intron | 30.0% |
| !! | GATATAGATGATTTGGTGTA+GGG | + | chr7.1:4618426-4618445 | MS.gene050439:intron | 30.0% |
| !! | TGATATAGATGATTTGGTGT+AGG | + | chr7.1:4618425-4618444 | MS.gene050439:intron | 30.0% |
| !!! | ATCCCAAAATCGTTAGTTTT+AGG | + | chr7.1:4619705-4619724 | MS.gene050439:intron | 30.0% |
| !!! | CAGAGAGAGTATTTTATCAA+GGG | + | chr7.1:4618378-4618397 | MS.gene050439:intron | 30.0% |
| !!! | GGCTACTCTGTTTTTATTTA+TGG | + | chr7.1:4618632-4618651 | MS.gene050439:intron | 30.0% |
| AAATTAAGGAGACGACCAAA+AGG | - | chr7.1:4620851-4620870 | None:intergenic | 35.0% | |
| AAGCTTGAGCTTATAGAGAA+TGG | - | chr7.1:4617994-4618013 | None:intergenic | 35.0% | |
| AGTAATGTCTCCATAAAGGA+CGG | - | chr7.1:4620489-4620508 | None:intergenic | 35.0% | |
| ATGCAAGGGTTATCCAAAAT+AGG | - | chr7.1:4619183-4619202 | None:intergenic | 35.0% | |
| ATTCTCTATAAGCTCAAGCT+TGG | + | chr7.1:4617993-4618012 | MS.gene050439:CDS | 35.0% | |
| CACGGATGGACAATTATATA+CGG | + | chr7.1:4618095-4618114 | MS.gene050439:intron | 35.0% | |
| CCAATCATTATCCAACTAAG+TGG | - | chr7.1:4619839-4619858 | None:intergenic | 35.0% | |
| CCACTTAGTTGGATAATGAT+TGG | + | chr7.1:4619836-4619855 | MS.gene050439:intron | 35.0% | |
| CCTTGATAAAATACTCTCTC+TGG | - | chr7.1:4618380-4618399 | None:intergenic | 35.0% | |
| CTTATTAGATCCGTCCTTTA+TGG | + | chr7.1:4620476-4620495 | MS.gene050439:intron | 35.0% | |
| GAAATGCGTATACTTATGGT+CGG | + | chr7.1:4617945-4617964 | MS.gene050439:CDS | 35.0% | |
| GAAGGAAATGCGTATACTTA+TGG | + | chr7.1:4617941-4617960 | MS.gene050439:CDS | 35.0% | |
| GCTAGAATTTACTAGGTAGT+CGG | + | chr7.1:4619966-4619985 | MS.gene050439:intron | 35.0% | |
| GCTGAAATAACTGATAAGCT+AGG | + | chr7.1:4620778-4620797 | MS.gene050439:CDS | 35.0% | |
| TAAAAACTGCCAAACACTCT+TGG | - | chr7.1:4620194-4620213 | None:intergenic | 35.0% | |
| TCTACTTGTTCTATATGTGC+AGG | + | chr7.1:4620898-4620917 | MS.gene050439:intron | 35.0% | |
| TCTGTTAGAACTGTAAAGGT+TGG | + | chr7.1:4619424-4619443 | MS.gene050439:intron | 35.0% | |
| TGATAATTATGAAGCACGGA+TGG | + | chr7.1:4618081-4618100 | MS.gene050439:intron | 35.0% | |
| TTCCTATCATCAAGAGACTT+GGG | + | chr7.1:4619634-4619653 | MS.gene050439:intron | 35.0% | |
| TTGCTTATAATAGTGACTGG+GGG | - | chr7.1:4618254-4618273 | None:intergenic | 35.0% | |
| TTGTAGAACTGTCAAGTGTT+AGG | + | chr7.1:4619266-4619285 | MS.gene050439:intron | 35.0% | |
| TTGTTCCGTGATATGCTATT+TGG | + | chr7.1:4618863-4618882 | MS.gene050439:intron | 35.0% | |
| TTTAATGTGCATTGGGTGTA+AGG | - | chr7.1:4620263-4620282 | None:intergenic | 35.0% | |
| TTTCCTATCATCAAGAGACT+TGG | + | chr7.1:4619633-4619652 | MS.gene050439:intron | 35.0% | |
| TTTCCTTCTTCGCAAATAAC+CGG | - | chr7.1:4617929-4617948 | None:intergenic | 35.0% | |
| ! | ACGATTGGTTGAAATTGGTA+TGG | + | chr7.1:4618611-4618630 | MS.gene050439:intron | 35.0% |
| ! | CAGCCTAAAACTAACGATTT+TGG | - | chr7.1:4619711-4619730 | None:intergenic | 35.0% |
| ! | TTCCCTTTTCAGATTGTATC+TGG | - | chr7.1:4618338-4618357 | None:intergenic | 35.0% |
| !! | AGAACATTAGCTTTACTGTG+TGG | + | chr7.1:4618474-4618493 | MS.gene050439:CDS | 35.0% |
| !! | ATTTGGTGTAGGGTTTAATG+TGG | + | chr7.1:4618436-4618455 | MS.gene050439:intron | 35.0% |
| !! | GAACATTAGCTTTACTGTGT+GGG | + | chr7.1:4618475-4618494 | MS.gene050439:CDS | 35.0% |
| !! | GAATTTGAACCAAGAGTGTT+TGG | + | chr7.1:4620182-4620201 | MS.gene050439:intron | 35.0% |
| !! | GTTTTAAATAGCAGCTAGAG+TGG | + | chr7.1:4618797-4618816 | MS.gene050439:intron | 35.0% |
| !! | TTGGTTGTTGTTGTTGTTTG+AGG | + | chr7.1:4619520-4619539 | MS.gene050439:intron | 35.0% |
| !!! | CCAGAGAGAGTATTTTATCA+AGG | + | chr7.1:4618377-4618396 | MS.gene050439:intron | 35.0% |
| !!! | TACACAAGGGCTTATTTTTG+TGG | + | chr7.1:4620516-4620535 | MS.gene050439:CDS | 35.0% |
| AAACAAGTCAAGAGGCCTAT+TGG | - | chr7.1:4619154-4619173 | None:intergenic | 40.0% | |
| AAATAACCGGCTGAATAGCT+TGG | - | chr7.1:4617916-4617935 | None:intergenic | 40.0% | |
| AAGCAGGGAAGAGGAAATTA+AGG | - | chr7.1:4620865-4620884 | None:intergenic | 40.0% | |
| AAGTAAGGTGATTTACGCCA+AGG | - | chr7.1:4620384-4620403 | None:intergenic | 40.0% | |
| AATGTCCGAGAGTAATGCAA+GGG | - | chr7.1:4619197-4619216 | None:intergenic | 40.0% | |
| ACTCACTCCCAATAACCAAT+AGG | + | chr7.1:4619136-4619155 | MS.gene050439:intron | 40.0% | |
| AGGGTTTAATGTGGAAACTG+TGG | + | chr7.1:4618445-4618464 | MS.gene050439:intron | 40.0% | |
| ATGGTTGGAGGTCAAAAGTA+AGG | - | chr7.1:4620399-4620418 | None:intergenic | 40.0% | |
| ATTATCCAACTAAGTGGGGT+CGG | - | chr7.1:4619833-4619852 | None:intergenic | 40.0% | |
| ATTGGTTATTGGGAGTGAGT+TGG | - | chr7.1:4619136-4619155 | None:intergenic | 40.0% | |
| CATACTGTATCACAATGGAG+AGG | - | chr7.1:4619996-4620015 | None:intergenic | 40.0% | |
| CTCAAACAACATTGCAAGCA+AGG | + | chr7.1:4620980-4620999 | MS.gene050439:CDS | 40.0% | |
| CTTGAGCTTATAGAGAATGG+TGG | - | chr7.1:4617991-4618010 | None:intergenic | 40.0% | |
| GACTTTATGAAGGACTAGAC+TGG | + | chr7.1:4620955-4620974 | MS.gene050439:CDS | 40.0% | |
| GATAACCCTTGCATTACTCT+CGG | + | chr7.1:4619189-4619208 | MS.gene050439:intron | 40.0% | |
| GTTGTAGCACTGTTGTATAG+CGG | + | chr7.1:4618922-4618941 | MS.gene050439:intron | 40.0% | |
| TAGCTTCAACAACACGATCT+CGG | - | chr7.1:4620555-4620574 | None:intergenic | 40.0% | |
| TCAGCAGCATTCATAGCATT+TGG | - | chr7.1:4620763-4620782 | None:intergenic | 40.0% | |
| TCTGGTGAAGGACTTTATGA+AGG | + | chr7.1:4620945-4620964 | MS.gene050439:CDS | 40.0% | |
| TGGCTCATACTGTATCACAA+TGG | - | chr7.1:4620001-4620020 | None:intergenic | 40.0% | |
| TGTGGGGGAAAATTGGAAAA+TGG | + | chr7.1:4619322-4619341 | MS.gene050439:intron | 40.0% | |
| TTATGGGTTTCATGCGATAG+AGG | + | chr7.1:4618649-4618668 | MS.gene050439:intron | 40.0% | |
| TTCATAAAGTCCTTCACCAG+AGG | - | chr7.1:4620946-4620965 | None:intergenic | 40.0% | |
| ! | AAACTTACCAATGGTGGGAA+TGG | - | chr7.1:4618033-4618052 | None:intergenic | 40.0% |
| ! | AACCCAAGTCTCTTGATGAT+AGG | - | chr7.1:4619639-4619658 | None:intergenic | 40.0% |
| ! | AATTTTCTGCGATGCGTGAT+TGG | + | chr7.1:4619066-4619085 | MS.gene050439:intron | 40.0% |
| ! | AGATCGTGTTGTTGAAGCTA+GGG | + | chr7.1:4620555-4620574 | MS.gene050439:CDS | 40.0% |
| ! | CAAGAGGCCTATTGGTTATT+GGG | - | chr7.1:4619146-4619165 | None:intergenic | 40.0% |
| ! | TCAAGAGGCCTATTGGTTAT+TGG | - | chr7.1:4619147-4619166 | None:intergenic | 40.0% |
| !! | CTTGTTTCTTGGGCCTATTT+TGG | + | chr7.1:4619167-4619186 | MS.gene050439:intron | 40.0% |
| !! | TTTGGTACATCGCTGTTTCT+TGG | + | chr7.1:4618542-4618561 | MS.gene050439:intron | 40.0% |
| !!! | CGTTAGTTTTAGGCTGTTAC+TGG | + | chr7.1:4619715-4619734 | MS.gene050439:intron | 40.0% |
| AGAGTGATGTGGGGGAAAAT+TGG | + | chr7.1:4619315-4619334 | MS.gene050439:intron | 45.0% | |
| AGATGAGAATGGACAGAAGC+AGG | - | chr7.1:4620881-4620900 | None:intergenic | 45.0% | |
| AGCTTTACTGTGTGGGATGT+TGG | + | chr7.1:4618482-4618501 | MS.gene050439:CDS | 45.0% | |
| AGTCTATTGCTAACGTGGAC+TGG | + | chr7.1:4620352-4620371 | MS.gene050439:intron | 45.0% | |
| CAATGTCCGAGAGTAATGCA+AGG | - | chr7.1:4619198-4619217 | None:intergenic | 45.0% | |
| CATTCACCAAGCTATTCAGC+CGG | + | chr7.1:4617907-4617926 | MS.gene050439:CDS | 45.0% | |
| GATGAGAATGGACAGAAGCA+GGG | - | chr7.1:4620880-4620899 | None:intergenic | 45.0% | |
| GGGGGAAAATTGGAAAATGG+AGG | + | chr7.1:4619325-4619344 | MS.gene050439:intron | 45.0% | |
| GTCTCAGTCTATTGCTAACG+TGG | + | chr7.1:4620347-4620366 | MS.gene050439:intron | 45.0% | |
| TGTTTCTTGGCGGCGTAATA+TGG | + | chr7.1:4618555-4618574 | MS.gene050439:intron | 45.0% | |
| TTTACTGTGTGGGATGTTGG+TGG | + | chr7.1:4618485-4618504 | MS.gene050439:CDS | 45.0% | |
| TTTCCCCCACATCACTCTTT+GGG | - | chr7.1:4619313-4619332 | None:intergenic | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr7.1:4619502-4619521 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr7.1:4619503-4619522 | None:intergenic | 45.0% |
| ! | GAGATCGTGTTGTTGAAGCT+AGG | + | chr7.1:4620554-4620573 | MS.gene050439:CDS | 45.0% |
| ! | TTTTCCCCCACATCACTCTT+TGG | - | chr7.1:4619314-4619333 | None:intergenic | 45.0% |
| !! | AGGCCTCTTGACTTGTTTCT+TGG | + | chr7.1:4619156-4619175 | MS.gene050439:intron | 45.0% |
| !! | GGCCTCTTGACTTGTTTCTT+GGG | + | chr7.1:4619157-4619176 | MS.gene050439:intron | 45.0% |
| !! | TTTGAGGTGCACTAGCTCTA+GGG | + | chr7.1:4619536-4619555 | MS.gene050439:intron | 45.0% |
| AATGGACAGAAGCAGGGAAG+AGG | - | chr7.1:4620874-4620893 | None:intergenic | 50.0% | |
| ACATGTCCGACACCTAGACA+CGG | + | chr7.1:4618188-4618207 | MS.gene050439:intron | 50.0% | |
| ACATGTGCTACCTCTGGTGA+AGG | + | chr7.1:4620933-4620952 | MS.gene050439:CDS | 50.0% | |
| ACCTAGACACGGCTAATCCT+AGG | + | chr7.1:4618199-4618218 | MS.gene050439:intron | 50.0% | |
| ACTAAGTGGGGTCGGATACA+TGG | - | chr7.1:4619825-4619844 | None:intergenic | 50.0% | |
| ATGGAGGAAATTGGGTGACG+TGG | + | chr7.1:4619341-4619360 | MS.gene050439:intron | 50.0% | |
| ATGGGCCCAAAGAGTGATGT+GGG | + | chr7.1:4619305-4619324 | MS.gene050439:intron | 50.0% | |
| ATTCACTTCGTCAGCGTCAC+TGG | + | chr7.1:4620806-4620825 | MS.gene050439:CDS | 50.0% | |
| CAGCCGGTTATTTGCGAAGA+AGG | + | chr7.1:4617923-4617942 | MS.gene050439:CDS | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr7.1:4619501-4619520 | MS.gene050439:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr7.1:4619498-4619517 | None:intergenic | 50.0% | |
| GCTGCACAGGATGTTAAACG+AGG | + | chr7.1:4620582-4620601 | MS.gene050439:CDS | 50.0% | |
| GGCCCAAGAAACAAGTCAAG+AGG | - | chr7.1:4619162-4619181 | None:intergenic | 50.0% | |
| TATGGGCCCAAAGAGTGATG+TGG | + | chr7.1:4619304-4619323 | MS.gene050439:intron | 50.0% | |
| TGTATCCGACCCCACTTAGT+TGG | + | chr7.1:4619825-4619844 | MS.gene050439:intron | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr7.1:4619504-4619523 | None:intergenic | 50.0% |
| ! | CTTACCAATGGTGGGAATGG+TGG | - | chr7.1:4618030-4618049 | None:intergenic | 50.0% |
| ! | GAGAATGGTGGTCTTACCAG+CGG | - | chr7.1:4617979-4617998 | None:intergenic | 50.0% |
| ! | GATTAGCCGTGTCTAGGTGT+CGG | - | chr7.1:4618197-4618216 | None:intergenic | 50.0% |
| ! | GTTTGAGGTGCACTAGCTCT+AGG | + | chr7.1:4619535-4619554 | MS.gene050439:intron | 50.0% |
| !! | AATCCTAGGAGTGTCGACGT+TGG | + | chr7.1:4618213-4618232 | MS.gene050439:intron | 50.0% |
| !! | ACGTGGACTGGCTTAAACCT+TGG | + | chr7.1:4620364-4620383 | MS.gene050439:intron | 50.0% |
| !! | GCACTAGCTCTAGGGTTACA+AGG | + | chr7.1:4619544-4619563 | MS.gene050439:intron | 50.0% |
| !! | GGTACATCGCTGTTTCTTGG+CGG | + | chr7.1:4618545-4618564 | MS.gene050439:intron | 50.0% |
| !! | TCCTAGGATTAGCCGTGTCT+AGG | - | chr7.1:4618203-4618222 | None:intergenic | 50.0% |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr7.1:4619490-4619509 | None:intergenic | 55.0% | |
| AGACCAACGTCGACACTCCT+AGG | - | chr7.1:4618219-4618238 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr7.1:4619489-4619508 | MS.gene050439:intron | 55.0% | |
| CAGAGCACATGTGCTACCTC+TGG | + | chr7.1:4620927-4620946 | MS.gene050439:CDS | 55.0% | |
| CAGAGGTAGCACATGTGCTC+TGG | - | chr7.1:4620929-4620948 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr7.1:4619496-4619515 | MS.gene050439:intron | 55.0% | |
| GACATGTGTCGTGTCGGACA+CGG | - | chr7.1:4618175-4618194 | None:intergenic | 55.0% | |
| GTCACCACCATTCCCACCAT+TGG | + | chr7.1:4618023-4618042 | MS.gene050439:CDS | 55.0% | |
| GTGTCGGACATGTGTCGTGT+CGG | - | chr7.1:4618181-4618200 | None:intergenic | 55.0% | |
| TGGGCCCAAAGAGTGATGTG+GGG | + | chr7.1:4619306-4619325 | MS.gene050439:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr7.1:4619490-4619509 | MS.gene050439:intron | 55.0% | |
| AAGCTAGGGACGAGCTGCAC+AGG | + | chr7.1:4620569-4620588 | MS.gene050439:CDS | 60.0% | |
| GGGCCCAAAGAGTGATGTGG+GGG | + | chr7.1:4619307-4619326 | MS.gene050439:intron | 60.0% | |
| TGTGTCGTGTCGGACACGGT+CGG | - | chr7.1:4618171-4618190 | None:intergenic | 60.0% | |
| !! | GGATGTTGGTGGCCAGGACA+AGG | + | chr7.1:4618496-4618515 | MS.gene050439:CDS | 60.0% |
| !! | TGTGTGGGATGTTGGTGGCC+AGG | + | chr7.1:4618490-4618509 | MS.gene050439:CDS | 60.0% |
| ATGGTCGGTCTCGATGCCGC+TGG | + | chr7.1:4617960-4617979 | MS.gene050439:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 4617897 | 4621106 | 4617897 | ID=MS.gene050439 |
| chr7.1 | mRNA | 4617897 | 4621106 | 4617897 | ID=MS.gene050439.t1;Parent=MS.gene050439 |
| chr7.1 | exon | 4617897 | 4618044 | 4617897 | ID=MS.gene050439.t1.exon1;Parent=MS.gene050439.t1 |
| chr7.1 | CDS | 4617897 | 4618044 | 4617897 | ID=cds.MS.gene050439.t1;Parent=MS.gene050439.t1 |
| chr7.1 | exon | 4618447 | 4618517 | 4618447 | ID=MS.gene050439.t1.exon2;Parent=MS.gene050439.t1 |
| chr7.1 | CDS | 4618447 | 4618517 | 4618447 | ID=cds.MS.gene050439.t1;Parent=MS.gene050439.t1 |
| chr7.1 | exon | 4620484 | 4620603 | 4620484 | ID=MS.gene050439.t1.exon3;Parent=MS.gene050439.t1 |
| chr7.1 | CDS | 4620484 | 4620603 | 4620484 | ID=cds.MS.gene050439.t1;Parent=MS.gene050439.t1 |
| chr7.1 | exon | 4620709 | 4620827 | 4620709 | ID=MS.gene050439.t1.exon4;Parent=MS.gene050439.t1 |
| chr7.1 | CDS | 4620709 | 4620827 | 4620709 | ID=cds.MS.gene050439.t1;Parent=MS.gene050439.t1 |
| chr7.1 | exon | 4620920 | 4621001 | 4620920 | ID=MS.gene050439.t1.exon5;Parent=MS.gene050439.t1 |
| chr7.1 | CDS | 4620920 | 4621001 | 4620920 | ID=cds.MS.gene050439.t1;Parent=MS.gene050439.t1 |
| chr7.1 | exon | 4621101 | 4621106 | 4621101 | ID=MS.gene050439.t1.exon6;Parent=MS.gene050439.t1 |
| chr7.1 | CDS | 4621101 | 4621106 | 4621101 | ID=cds.MS.gene050439.t1;Parent=MS.gene050439.t1 |
| Gene Sequence |
| Protein sequence |
