AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene67557


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene67557.t1 MTR_5g023830 99.631 542 2 0 1 542 1 542 0.0 1076
MS.gene67557.t1 MTR_5g023830 99.262 542 2 1 1 542 1 540 0.0 1068
MS.gene67557.t1 MTR_8g073920 73.042 549 131 9 1 542 1 539 0.0 674
MS.gene67557.t1 MTR_8g073910 39.925 531 213 14 20 542 53 485 1.80e-102 317
MS.gene67557.t1 MTR_7g451280 34.921 126 76 3 313 434 12 135 4.26e-15 72.8
MS.gene67557.t1 MTR_1g026290 35.514 107 67 2 17 123 24 128 5.07e-12 69.3
MS.gene67557.t1 MTR_1g026290 35.514 107 67 2 17 123 24 128 5.46e-12 69.3
MS.gene67557.t1 MTR_1g026290 35.514 107 67 2 17 123 24 128 6.74e-12 68.9
MS.gene67557.t1 MTR_1g026290 35.514 107 67 2 17 123 24 128 7.05e-12 68.9
MS.gene67557.t1 MTR_8g072040 48.387 62 28 1 20 81 46 103 3.38e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene67557.t1 AT2G17200 57.829 562 206 12 1 542 1 551 0.0 543
MS.gene67557.t1 AT2G17190 57.790 552 209 11 1 542 1 538 0.0 541
MS.gene67557.t1 AT5G42220 40.260 77 43 1 13 89 20 93 3.35e-12 69.7
MS.gene67557.t1 AT5G42220 40.260 77 43 1 13 89 20 93 3.35e-12 69.7

Find 176 sgRNAs with CRISPR-Local

Find 491 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTATTTCTCTCACTAAAT+TGG 0.104754 5.4:-15308097 None:intergenic
AAATGACAGTTCCAGAATTT+TGG 0.122648 5.4:+15308422 MS.gene67557:CDS
GCTAATCTGAACGGAAAATT+TGG 0.197973 5.4:-15306766 None:intergenic
GGTGGTCTCAATAGTTTATT+TGG 0.198870 5.4:+15308024 MS.gene67557:CDS
TCAACAACGCTTGATTTATA+AGG 0.199192 5.4:+15306851 MS.gene67557:CDS
CTTGGAGCTTCACTGTTTCC+AGG 0.257067 5.4:+15307970 MS.gene67557:CDS
CCCACAGATGCAAGAGCTTA+TGG 0.281536 5.4:+15308185 MS.gene67557:CDS
TGCAGCGGTTGAGCGACTTT+TGG 0.298639 5.4:+15312377 MS.gene67557:CDS
AAATTGGGATTTGACATAAA+TGG 0.304375 5.4:-15308081 None:intergenic
AACTAACCATTTGATCTGTT+TGG 0.313503 5.4:-15312160 None:intergenic
TCTCTCATTGAATTCATATC+AGG 0.316390 5.4:-15309028 None:intergenic
ATTATTTCTCTCACTAAATT+GGG 0.350981 5.4:-15308096 None:intergenic
TTGACACGCAAGAGAACTTA+AGG 0.354760 5.4:+15312325 MS.gene67557:CDS
TTCCACCGTTGTTTCCTTCA+AGG 0.355595 5.4:+15306794 MS.gene67557:CDS
TTAGGAAGTGGGTTAGTATT+GGG 0.357261 5.4:-15308519 None:intergenic
ATCATTTCACGCATGATCTC+AGG 0.358686 5.4:-15308282 None:intergenic
TCGAGCATGTTTGGTGGACT+TGG 0.364106 5.4:+15312118 MS.gene67557:CDS
CTCAATAGTTTATTTGGAGC+AGG 0.373769 5.4:+15308030 MS.gene67557:CDS
ACCTTGAGTCCCCAAAATTC+TGG 0.374709 5.4:-15308433 None:intergenic
GGCAGATCACACTGTCCATT+TGG 0.376015 5.4:+15307828 MS.gene67557:CDS
AGGGCTCTTATTGCTACATC+AGG 0.383859 5.4:+15312345 MS.gene67557:CDS
GGTATCAATGGGATGGGAGG+AGG 0.385738 5.4:+15308000 MS.gene67557:CDS
CCCAACATGCCTTCGAGATC+TGG 0.386175 5.4:-15308795 None:intergenic
TGGTCGATGGATTCCTCGTT+TGG 0.386572 5.4:-15308458 None:intergenic
CAACAACGCTTGATTTATAA+GGG 0.388674 5.4:+15306852 MS.gene67557:CDS
ATTAGGAAGTGGGTTAGTAT+TGG 0.396465 5.4:-15308520 None:intergenic
ATCAATGGGATGGGAGGAGG+TGG 0.398298 5.4:+15308003 MS.gene67557:CDS
TCTCTTGAAGCTGGGTAAGC+TGG 0.399039 5.4:-15312293 None:intergenic
TGCTGGTGCTAATGAGGGTG+GGG 0.401780 5.4:+15307930 MS.gene67557:CDS
GGAGCAGATGACCAAGGATT+AGG 0.402983 5.4:-15308537 None:intergenic
AATACCTGATTCATTGTTTG+AGG 0.403719 5.4:-15308900 None:intergenic
TTGAGTATGTGTGCCAGCTC+AGG 0.405526 5.4:-15308216 None:intergenic
TTCTTGTAGCCTCAAGTGTC+TGG 0.405809 5.4:-15308257 None:intergenic
CTGATTCATTGTTTGAGGAT+TGG 0.409445 5.4:-15308895 None:intergenic
CACACTGTCCATTTGGTTCG+TGG 0.412105 5.4:+15307835 MS.gene67557:CDS
CAATCCTCAAACAATGAATC+AGG 0.413237 5.4:+15308896 MS.gene67557:CDS
ATTAGCCCCACCAGTTGTAT+TGG 0.419506 5.4:-15307869 None:intergenic
AACGGAAAATTTGGAACCAT+TGG 0.427274 5.4:-15306757 None:intergenic
CTGAGCAATAACATCCTTGA+AGG 0.430527 5.4:-15306808 None:intergenic
TAGAAGGTTGCGCACTATCT+CGG 0.430838 5.4:-15308154 None:intergenic
GGATTAGGAGGACCTGGACT+TGG 0.430913 5.4:+15307952 MS.gene67557:CDS
TGCTGCAATTGTTCAAGATC+TGG 0.431718 5.4:-15308057 None:intergenic
TTATAAGGGAAGGATTCTTA+AGG 0.440217 5.4:+15306866 MS.gene67557:CDS
TGCAGGGAACCAGGTCAAAC+AGG 0.442720 5.4:+15310862 MS.gene67557:intron
CCCACTGGCTTAGGCGGGCT+TGG 0.445121 5.4:+15308768 MS.gene67557:CDS
CCAGATCTCGAAGGCATGTT+GGG 0.445288 5.4:+15308795 MS.gene67557:CDS
CCAGGGCTAGGAGGTATCAA+TGG 0.448035 5.4:+15307988 MS.gene67557:CDS
TCCATAAGCTCTTGCATCTG+TGG 0.453729 5.4:-15308186 None:intergenic
AGAAGGTTGCGCACTATCTC+GGG 0.456339 5.4:-15308153 None:intergenic
TTTACGCCTGCCAATACAAC+TGG 0.458558 5.4:+15307859 MS.gene67557:CDS
TGGGTCAATGAACCAGCATC+TGG 0.462855 5.4:-15308825 None:intergenic
GCTTCACTGTTTCCAGGGCT+AGG 0.463140 5.4:+15307976 MS.gene67557:CDS
GAGATGTTATCGAGCATGTT+TGG 0.463587 5.4:+15312109 MS.gene67557:CDS
GCCCCACCAGTTGTATTGGC+AGG 0.463998 5.4:-15307865 None:intergenic
AGAATCCCATCTCTTGAAGC+TGG 0.468360 5.4:-15312302 None:intergenic
ACCAAGCCCGCCTAAGCCAG+TGG 0.470102 5.4:-15308769 None:intergenic
GCTGTTCCAAACAGATCAAA+TGG 0.470657 5.4:+15312154 MS.gene67557:CDS
CACCTACTGCTGCAGATGCT+TGG 0.472896 5.4:+15308736 MS.gene67557:CDS
AATGGGATGGGAGGAGGTGG+TGG 0.473681 5.4:+15308006 MS.gene67557:CDS
TTAAATGCCACCACAATGGC+AGG 0.474034 5.4:+15308399 MS.gene67557:CDS
AGCATTAGTAGTTGAGGGAT+TGG 0.475466 5.4:-15308478 None:intergenic
TGACACGCAAGAGAACTTAA+GGG 0.478720 5.4:+15312326 MS.gene67557:CDS
TCTGCCTACCTGCATTGTCT+CGG 0.479867 5.4:-15309092 None:intergenic
ATCAACATTCGTTGTTCCAA+TGG 0.480822 5.4:+15306741 MS.gene67557:CDS
CTAACCCACTTCCTAATCCT+TGG 0.484228 5.4:+15308526 MS.gene67557:CDS
GCTTCAGCATTAGTAGTTGA+GGG 0.484794 5.4:-15308483 None:intergenic
CTCTTGAAGCTGGGTAAGCT+GGG 0.484867 5.4:-15312292 None:intergenic
AGCGGTTGCGTCACCTCCCA+TGG 0.486145 5.4:-15306676 None:intergenic
CAAGCTCTTATGACTCAACT+TGG 0.487980 5.4:+15309790 MS.gene67557:CDS
TCTGTGGGTTACTCATTAGA+AGG 0.488987 5.4:-15308170 None:intergenic
CTGCCTACCTGCATTGTCTC+GGG 0.489553 5.4:-15309091 None:intergenic
CTTACCCAGCTTCAAGAGAT+GGG 0.490256 5.4:+15312297 MS.gene67557:CDS
TGCATCATTTGAGAAATAGC+TGG 0.490319 5.4:-15308861 None:intergenic
TGCTTCAGCATTAGTAGTTG+AGG 0.492949 5.4:-15308484 None:intergenic
ATGTTTGGTGGACTTGGAGC+TGG 0.493489 5.4:+15312124 MS.gene67557:CDS
GCTTACCCAGCTTCAAGAGA+TGG 0.498517 5.4:+15312296 MS.gene67557:CDS
TGAGTATGTGTGCCAGCTCA+GGG 0.501629 5.4:-15308215 None:intergenic
AGTGTCTGGCGAAGTGTGCT+AGG 0.502999 5.4:-15308243 None:intergenic
TGCGCTTTGTGCAGGGAACC+AGG 0.504796 5.4:+15310853 MS.gene67557:intron
GGATTTATTTATAGGTTTGG+AGG 0.505260 5.4:+15307807 MS.gene67557:intron
TGGGTAGCATACAATGTCTC+TGG 0.506004 5.4:-15312273 None:intergenic
TTGGAGCTTCACTGTTTCCA+GGG 0.506774 5.4:+15307971 MS.gene67557:CDS
CAGACACCCACTGGCTTAGG+CGG 0.506784 5.4:+15308762 MS.gene67557:CDS
AGTGGGTTAGTATTGGGTAC+AGG 0.509548 5.4:-15308513 None:intergenic
AACAGTGAAGCTCCAAGTCC+AGG 0.510685 5.4:-15307964 None:intergenic
GCGTAAAGCCACGAACCAAA+TGG 0.512523 5.4:-15307843 None:intergenic
CTCAGCATGTTAAACCCCTC+AGG 0.513221 5.4:-15308345 None:intergenic
AACGCTTGATTTATAAGGGA+AGG 0.514145 5.4:+15306856 MS.gene67557:CDS
CAGCAGACACCCACTGGCTT+AGG 0.516606 5.4:+15308759 MS.gene67557:CDS
TAGAGCTGCTGGTGCTAATG+AGG 0.518541 5.4:+15307924 MS.gene67557:CDS
GTAGTTGAGGGATTGGTCGA+TGG 0.525383 5.4:-15308471 None:intergenic
AGCATTAGTAGTGGTCGTAT+TGG 0.525818 5.4:-15307902 None:intergenic
GTGCCTCCACCTGTTTGACC+TGG 0.527581 5.4:-15310871 None:intergenic
GGTCAAACAGGTGGAGGCAC+TGG 0.529335 5.4:+15310874 MS.gene67557:CDS
GCTTGGCAGCAGACACCCAC+TGG 0.530105 5.4:+15308753 MS.gene67557:CDS
GATGACCAAGGATTAGGAAG+TGG 0.532555 5.4:-15308531 None:intergenic
ACTCCTCCGTCGGTGGATTG+TGG 0.533890 5.4:-15306714 None:intergenic
CGCCTGCCAATACAACTGGT+GGG 0.535436 5.4:+15307863 MS.gene67557:CDS
GAAAACATTCGAAGAAACTC+CGG 0.535915 5.4:-15309064 None:intergenic
AGTAGGACCAGTGAACAACT+TGG 0.536856 5.4:+15312081 MS.gene67557:intron
AGACACCCACTGGCTTAGGC+GGG 0.538568 5.4:+15308763 MS.gene67557:CDS
TTGGGTGGTATGCCAGATGC+TGG 0.539154 5.4:+15308813 MS.gene67557:CDS
TCCAACCCCAAGTTGTTCAC+TGG 0.539588 5.4:-15312088 None:intergenic
AAAACATTCGAAGAAACTCC+GGG 0.542137 5.4:-15309063 None:intergenic
GCTGCTGGTGCTAATGAGGG+TGG 0.544007 5.4:+15307928 MS.gene67557:CDS
TACCTGCATTGTCTCGGGTG+AGG 0.546530 5.4:-15309086 None:intergenic
CAGGGCTAGGAGGTATCAAT+GGG 0.546608 5.4:+15307989 MS.gene67557:CDS
AACATTGAATCTTCTCCTGA+GGG 0.546959 5.4:+15308330 MS.gene67557:CDS
CCATAAGCTCTTGCATCTGT+GGG 0.553739 5.4:-15308185 None:intergenic
TCAATAGTTTATTTGGAGCA+GGG 0.554171 5.4:+15308031 MS.gene67557:CDS
GATCAAACGCTTCAAAGCTA+TGG 0.555162 5.4:+15306891 MS.gene67557:CDS
CTGCTGGTGCTAATGAGGGT+GGG 0.555245 5.4:+15307929 MS.gene67557:CDS
TTCCTCACCCGAGACAATGC+AGG 0.556082 5.4:+15309084 MS.gene67557:CDS
GTAGGACCAGTGAACAACTT+GGG 0.556227 5.4:+15312082 MS.gene67557:intron
GCCAGATCTCGAAGGCATGT+TGG 0.556478 5.4:+15308794 MS.gene67557:CDS
GAGAGAAGTGATGCAAAACC+CGG 0.556701 5.4:+15309045 MS.gene67557:CDS
ACCAGTGAACAACTTGGGGT+TGG 0.558830 5.4:+15312087 MS.gene67557:CDS
GATCTTAACTCCTCCGTCGG+TGG 0.560218 5.4:-15306721 None:intergenic
GAGGTGCCCACACTAATGTC+AGG 0.561658 5.4:+15308706 MS.gene67557:CDS
CCATTGATACCTCCTAGCCC+TGG 0.562542 5.4:-15307988 None:intergenic
GTGGGTTAGTATTGGGTACA+GGG 0.562575 5.4:-15308512 None:intergenic
ACTACTAATGCTAGAGCTGC+TGG 0.562735 5.4:+15307913 MS.gene67557:CDS
ACGCCTGCCAATACAACTGG+TGG 0.564551 5.4:+15307862 MS.gene67557:CDS
GTCATTTCCTGCCATTGTGG+TGG 0.564771 5.4:-15308406 None:intergenic
TCATTTCACGCATGATCTCA+GGG 0.568168 5.4:-15308281 None:intergenic
ACTGGTGGGGCTAATACCAC+TGG 0.571914 5.4:+15307877 MS.gene67557:CDS
TTGATCTCCTGACATTAGTG+TGG 0.573945 5.4:-15308713 None:intergenic
GCTAGGAGGTATCAATGGGA+TGG 0.575239 5.4:+15307993 MS.gene67557:CDS
AGAGCTGCTGGTGCTAATGA+GGG 0.575248 5.4:+15307925 MS.gene67557:CDS
ATGTTATCGAGCATGTTTGG+TGG 0.578304 5.4:+15312112 MS.gene67557:CDS
GAATCCCATCTCTTGAAGCT+GGG 0.579933 5.4:-15312301 None:intergenic
GTTGATCTTAACTCCTCCGT+CGG 0.580267 5.4:-15306724 None:intergenic
CTGAGGGGTTTAACATGCTG+AGG 0.586446 5.4:+15308346 MS.gene67557:CDS
CCCACCGACGCCGCCATGGG+AGG 0.587131 5.4:+15306663 None:intergenic
CAACATTGAATCTTCTCCTG+AGG 0.588430 5.4:+15308329 MS.gene67557:CDS
CTAGGAGGTATCAATGGGAT+GGG 0.592010 5.4:+15307994 MS.gene67557:CDS
TATGGATAGAAACCCTGAGC+TGG 0.593562 5.4:+15308203 MS.gene67557:CDS
GGAGGTATCAATGGGATGGG+AGG 0.595186 5.4:+15307997 MS.gene67557:CDS
GCTGGTGCTAATGAGGGTGG+GGG 0.597072 5.4:+15307931 MS.gene67557:CDS
ATGACCAAGGATTAGGAAGT+GGG 0.597740 5.4:-15308530 None:intergenic
TTGATCTGTTTGGAACAGCT+AGG 0.600073 5.4:-15312150 None:intergenic
TGCAATTGTTCAAGATCTGG+AGG 0.600252 5.4:-15308054 None:intergenic
GGGCTCTTATTGCTACATCA+GGG 0.607810 5.4:+15312346 MS.gene67557:CDS
GAACCAGGTCAAACAGGTGG+AGG 0.613496 5.4:+15310868 MS.gene67557:CDS
TCACTGTTTCCAGGGCTAGG+AGG 0.618323 5.4:+15307979 MS.gene67557:CDS
TGGCTCCGTGGTGGTTTCAG+CGG 0.619877 5.4:-15306694 None:intergenic
GGACTCAAGGTGGCCAAACG+AGG 0.622656 5.4:+15308445 MS.gene67557:CDS
TAGGACCAGTGAACAACTTG+GGG 0.623179 5.4:+15312083 MS.gene67557:intron
ACTGTCATTTCCTGCCATTG+TGG 0.626018 5.4:-15308409 None:intergenic
AGGAAACAACGGTGGAATCG+AGG 0.627185 5.4:-15306788 None:intergenic
CACACTTCGCCAGACACTTG+AGG 0.628666 5.4:+15308248 MS.gene67557:CDS
GCCTGCCAATACAACTGGTG+GGG 0.630823 5.4:+15307864 MS.gene67557:CDS
ATCAGGGAATGTTCATGCAG+CGG 0.635372 5.4:+15312362 MS.gene67557:CDS
TGCCAAGCATCTGCAGCAGT+AGG 0.635447 5.4:-15308738 None:intergenic
ACGGAGCCACAATCCACCGA+CGG 0.636141 5.4:+15306708 MS.gene67557:CDS
GATCTCGAAGGCATGTTGGG+TGG 0.636292 5.4:+15308798 MS.gene67557:CDS
TGATCTCCTGACATTAGTGT+GGG 0.636569 5.4:-15308712 None:intergenic
CCAAGCCCGCCTAAGCCAGT+GGG 0.642471 5.4:-15308768 None:intergenic
AGTGGTCGTATTGGCACCAG+TGG 0.643075 5.4:-15307893 None:intergenic
CTTGGTATGCCAGATCTCGA+AGG 0.651574 5.4:+15308786 MS.gene67557:CDS
GGAATCGAGGCTAATCTGAA+CGG 0.654752 5.4:-15306775 None:intergenic
AGCAGCTCTAGCATTAGTAG+TGG 0.657872 5.4:-15307911 None:intergenic
AACATCCTTGAAGGAAACAA+CGG 0.660672 5.4:-15306799 None:intergenic
ACATTGAATCTTCTCCTGAG+GGG 0.662571 5.4:+15308331 MS.gene67557:CDS
GTAGCATACAATGTCTCTGG+AGG 0.664986 5.4:-15312270 None:intergenic
TGGGTTAGTATTGGGTACAG+GGG 0.669270 5.4:-15308511 None:intergenic
TTACTTGGAGCAGATGACCA+AGG 0.670590 5.4:-15308543 None:intergenic
AGATCATGCGTGAAATGATG+AGG 0.680701 5.4:+15308286 MS.gene67557:CDS
ATCCTTGAAGGAAACAACGG+TGG 0.687823 5.4:-15306796 None:intergenic
GGTGGATTGTGGCTCCGTGG+TGG 0.692838 5.4:-15306703 None:intergenic
GTATGAATACTGATCAGCGT+GGG 0.693610 5.4:+15309002 MS.gene67557:CDS
GAGCCACAATCCACCGACGG+AGG 0.705954 5.4:+15306711 MS.gene67557:CDS
AGGGAACCAGGTCAAACAGG+TGG 0.708080 5.4:+15310865 MS.gene67557:intron
GTCGGTGGATTGTGGCTCCG+TGG 0.709596 5.4:-15306706 None:intergenic
GGTATGAATACTGATCAGCG+TGG 0.717241 5.4:+15309001 MS.gene67557:CDS
CGCAACCGCTGAAACCACCA+CGG 0.722380 5.4:+15306689 MS.gene67557:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAACAGTAT+TGG - chr5.4:15311893-15311912 None:intergenic 10.0%
!! GTTAAAAAGAAAATAATAAA+GGG + chr5.4:15310016-15310035 MS.gene67557:intron 10.0%
!! TGTTAAAAAGAAAATAATAA+AGG + chr5.4:15310015-15310034 MS.gene67557:intron 10.0%
!! TTAAAAAGAAAATAATAAAG+GGG + chr5.4:15310017-15310036 MS.gene67557:intron 10.0%
!! TTAATTTATTTAGTATATCT+AGG - chr5.4:15309728-15309747 None:intergenic 10.0%
!!! ATATAATTTTCTTTTGTATT+TGG + chr5.4:15307786-15307805 MS.gene67557:intron 10.0%
!!! TTATTTTCTCAAATTATTAT+TGG + chr5.4:15307292-15307311 MS.gene67557:intron 10.0%
!! AAAATAATAATTAATAGTGG+TGG + chr5.4:15307671-15307690 MS.gene67557:intron 15.0%
!! AAAATTAATGATTGAATGTT+AGG - chr5.4:15309851-15309870 None:intergenic 15.0%
!! AAATAATAATTAATAGTGGT+GGG + chr5.4:15307672-15307691 MS.gene67557:intron 15.0%
!! ACAATAATTCAAATTTAGAT+TGG - chr5.4:15311016-15311035 None:intergenic 15.0%
!! ATATAATAAAAACATAGACA+CGG - chr5.4:15307349-15307368 None:intergenic 15.0%
!! ATTTGAATGATGTATTTATA+AGG + chr5.4:15311521-15311540 MS.gene67557:intron 15.0%
!! CATTGAATAATTTATGTATT+TGG - chr5.4:15307126-15307145 None:intergenic 15.0%
!! CGAACAAATATATAAATAAT+TGG - chr5.4:15306932-15306951 None:intergenic 15.0%
!! TATATAAATAATTGGAAGAT+CGG - chr5.4:15306924-15306943 None:intergenic 15.0%
!! TTGTATTTGGATTTATTTAT+AGG + chr5.4:15307799-15307818 MS.gene67557:intron 15.0%
!! TTTATCATAATAGAGTAAAT+CGG - chr5.4:15309686-15309705 None:intergenic 15.0%
!!! ACTATTTTATTTGGATATAA+AGG + chr5.4:15307462-15307481 MS.gene67557:intron 15.0%
!!! ATTATTTAATAGATTTTGCA+TGG - chr5.4:15308133-15308152 None:intergenic 15.0%
!!! CTATTTTATTTGGATATAAA+GGG + chr5.4:15307463-15307482 MS.gene67557:intron 15.0%
!! ACATCATTCAAATATAATTG+AGG - chr5.4:15311514-15311533 None:intergenic 20.0%
!! ATATAAATAATTGGAAGATC+GGG - chr5.4:15306923-15306942 None:intergenic 20.0%
!! GATAAATTGTATGAGTAATA+AGG + chr5.4:15309305-15309324 MS.gene67557:intron 20.0%
!! GATAGCAAATTATTGAATAA+CGG + chr5.4:15309533-15309552 MS.gene67557:intron 20.0%
!! TAAGTAAAGATGTACAATTT+GGG + chr5.4:15310481-15310500 MS.gene67557:intron 20.0%
!! TCTCCATTTATCAAAATAAA+TGG - chr5.4:15307725-15307744 None:intergenic 20.0%
!! TGAAAAAAATCATACTTACT+TGG - chr5.4:15308561-15308580 None:intergenic 20.0%
!! TTAACCTATTAATAAGTTTG+TGG + chr5.4:15309186-15309205 MS.gene67557:intron 20.0%
!! TTTGGATTTATTTATAGGTT+TGG + chr5.4:15307804-15307823 MS.gene67557:intron 20.0%
!!! AAAAAAAAAAACAGTATTGG+TGG - chr5.4:15311890-15311909 None:intergenic 20.0%
!!! AAAAAAAATGTAGGCATTTT+GGG + chr5.4:15310086-15310105 MS.gene67557:intron 20.0%
!!! ATTATTTAGAATAGTAATGC+AGG - chr5.4:15312215-15312234 None:intergenic 20.0%
!!! ATTATTTCTCTCACTAAATT+GGG - chr5.4:15308099-15308118 None:intergenic 20.0%
!!! ATTTATTTTGATAAATGGAG+AGG + chr5.4:15307724-15307743 MS.gene67557:intron 20.0%
!!! GCTTTAAACACTATTTTATT+TGG + chr5.4:15307453-15307472 MS.gene67557:intron 20.0%
!!! TATTGTGAATTATAACGTTT+TGG + chr5.4:15311030-15311049 MS.gene67557:intron 20.0%
!!! TTAAATTTGTTTCTGTTAGT+AGG + chr5.4:15312064-15312083 MS.gene67557:intron 20.0%
!!! TTTTGGTTATAGCTTTTTTT+TGG + chr5.4:15310343-15310362 MS.gene67557:intron 20.0%
! AAAGCTATAACCAAAAAAAG+AGG - chr5.4:15310339-15310358 None:intergenic 25.0%
! AAATTGGGATTTGACATAAA+TGG - chr5.4:15308084-15308103 None:intergenic 25.0%
! AAGTAAACCCTAAAAAAAGA+TGG - chr5.4:15311607-15311626 None:intergenic 25.0%
! AATGGTTTCACATGTATAAA+TGG - chr5.4:15311295-15311314 None:intergenic 25.0%
! AGCTTAAATTTGGTTAGAAA+CGG - chr5.4:15311249-15311268 None:intergenic 25.0%
! ATACCATTTAGAGATATAGT+GGG - chr5.4:15307699-15307718 None:intergenic 25.0%
! CCATTTATCAAAATAAATGG+AGG - chr5.4:15307722-15307741 None:intergenic 25.0%
! CTAAGTAAAGATGTACAATT+TGG + chr5.4:15310480-15310499 MS.gene67557:intron 25.0%
! CTCTTTCTAAATAGAAGAAA+TGG - chr5.4:15307627-15307646 None:intergenic 25.0%
! TAATAAAACACACACTTTCA+AGG - chr5.4:15310455-15310474 None:intergenic 25.0%
! TAATCATATGCTATGAAACA+TGG + chr5.4:15309926-15309945 MS.gene67557:intron 25.0%
! TGAATGATGTATTTATAAGG+TGG + chr5.4:15311524-15311543 MS.gene67557:intron 25.0%
! TGGTCATCTATGTATATATA+TGG + chr5.4:15310204-15310223 MS.gene67557:intron 25.0%
! TTAGTATGTTATACATGTAG+AGG + chr5.4:15311419-15311438 MS.gene67557:intron 25.0%
! TTGAAAATTTGTCTACTATG+AGG + chr5.4:15311116-15311135 MS.gene67557:intron 25.0%
! TTGTTCATATGGAAATTCTT+TGG + chr5.4:15307560-15307579 MS.gene67557:intron 25.0%
!! CATTATTTCTCTCACTAAAT+TGG - chr5.4:15308100-15308119 None:intergenic 25.0%
!! GAAAAAAAATGTAGGCATTT+TGG + chr5.4:15310085-15310104 MS.gene67557:intron 25.0%
!! GACAATTTTGCATTCATTTA+TGG + chr5.4:15310904-15310923 MS.gene67557:intron 25.0%
!! GTCAATTGTTTCTTGTAAAT+AGG - chr5.4:15307099-15307118 None:intergenic 25.0%
!! TCTTAGCTAAGTCTTTTATT+AGG + chr5.4:15311151-15311170 MS.gene67557:intron 25.0%
!! TTTAATCGTACACTCATTTT+AGG + chr5.4:15309224-15309243 MS.gene67557:intron 25.0%
!!! ATAAATCATATAGGTTGATC+TGG + chr5.4:15311180-15311199 MS.gene67557:intron 25.0%
!!! ATTATAACGTTTTGGATCAA+TGG + chr5.4:15311038-15311057 MS.gene67557:intron 25.0%
!!! ATTGTTTATTTTATGCTGTC+AGG + chr5.4:15307530-15307549 MS.gene67557:intron 25.0%
!!! ATTTTTTAATGTGCAACCAA+TGG - chr5.4:15312017-15312036 None:intergenic 25.0%
!!! CCTCCATTTATTTTGATAAA+TGG + chr5.4:15307719-15307738 MS.gene67557:intron 25.0%
!!! CTTGGTTTATTTTAGATTCT+TGG + chr5.4:15308980-15308999 MS.gene67557:intron 25.0%
!!! GTTGATGAATTTTAGCTAAT+AGG + chr5.4:15309133-15309152 MS.gene67557:intron 25.0%
!!! TAAATCATATAGGTTGATCT+GGG + chr5.4:15311181-15311200 MS.gene67557:intron 25.0%
!!! TATTTTCACTTTTGTTTCTC+CGG + chr5.4:15309276-15309295 MS.gene67557:intron 25.0%
!!! TTATCATTTTTCGTGCTTTT+TGG + chr5.4:15307053-15307072 MS.gene67557:intron 25.0%
!!! TTTTGTTTACTATTTGCTAC+TGG + chr5.4:15310812-15310831 MS.gene67557:intron 25.0%
AAAAAACCCACTTATAAACC+TGG - chr5.4:15311449-15311468 None:intergenic 30.0%
AAAAACCCACTTATAAACCT+GGG - chr5.4:15311448-15311467 None:intergenic 30.0%
AAAATAATAAAGGGGATCTC+GGG + chr5.4:15310025-15310044 MS.gene67557:intron 30.0%
AAAGACTTAGCTAAGATCTT+AGG - chr5.4:15311147-15311166 None:intergenic 30.0%
AACTAACCATTTGATCTGTT+TGG - chr5.4:15312163-15312182 None:intergenic 30.0%
AAGACTTAGCTAAGATCTTA+GGG - chr5.4:15311146-15311165 None:intergenic 30.0%
AATACCTGATTCATTGTTTG+AGG - chr5.4:15308903-15308922 None:intergenic 30.0%
ACATGTATAAATGGATACGA+AGG - chr5.4:15311286-15311305 None:intergenic 30.0%
ACTCAAAAAGGATTTATAGC+AGG - chr5.4:15310657-15310676 None:intergenic 30.0%
AGATAAATTAATACTCCCTC+CGG - chr5.4:15307183-15307202 None:intergenic 30.0%
AGATGACCAAGAATCAATAA+CGG - chr5.4:15310193-15310212 None:intergenic 30.0%
AGGTGGATGATAAATCATAT+AGG + chr5.4:15311171-15311190 MS.gene67557:intron 30.0%
ATCTATAGAATAGCAATGAC+GGG + chr5.4:15311955-15311974 MS.gene67557:intron 30.0%
ATGAATTTGTCGACAATCAA+TGG + chr5.4:15307418-15307437 MS.gene67557:intron 30.0%
ATGAGTTGTATTTGAACCTA+GGG + chr5.4:15310616-15310635 MS.gene67557:intron 30.0%
ATTGTGGTGGCATTTAAAAA+TGG - chr5.4:15308396-15308415 None:intergenic 30.0%
ATTTGGTTAGAAACGGTTTA+AGG - chr5.4:15311242-15311261 None:intergenic 30.0%
CAACAACGCTTGATTTATAA+GGG + chr5.4:15306852-15306871 MS.gene67557:CDS 30.0%
CAGCTAAAATAACAAGCATT+TGG - chr5.4:15308686-15308705 None:intergenic 30.0%
CATCTATAGAATAGCAATGA+CGG + chr5.4:15311954-15311973 MS.gene67557:intron 30.0%
GAAAATAATAAAGGGGATCT+CGG + chr5.4:15310024-15310043 MS.gene67557:intron 30.0%
GATACCATTTAGAGATATAG+TGG - chr5.4:15307700-15307719 None:intergenic 30.0%
GGATTTATTTATAGGTTTGG+AGG + chr5.4:15307807-15307826 MS.gene67557:intron 30.0%
GTCAAATGTTTCTCGTAAAA+AGG + chr5.4:15307156-15307175 MS.gene67557:intron 30.0%
TACATGTGAAACCATTTACA+TGG + chr5.4:15311299-15311318 MS.gene67557:intron 30.0%
TACTGTATATGTGGTATTCA+TGG - chr5.4:15311832-15311851 None:intergenic 30.0%
TAGAGCAAAAAAACTGAGTT+TGG - chr5.4:15310241-15310260 None:intergenic 30.0%
TCAACAACGCTTGATTTATA+AGG + chr5.4:15306851-15306870 MS.gene67557:CDS 30.0%
TCACTACTTATTTAGTCACA+AGG - chr5.4:15310761-15310780 None:intergenic 30.0%
TCCAGTATTTGCATTTGTAT+GGG + chr5.4:15307379-15307398 MS.gene67557:intron 30.0%
TCTCTCATTGAATTCATATC+AGG - chr5.4:15309031-15309050 None:intergenic 30.0%
TGCAAATCACATACTCAAAA+AGG - chr5.4:15310669-15310688 None:intergenic 30.0%
TGCACCACAAACTTATTAAT+AGG - chr5.4:15309193-15309212 None:intergenic 30.0%
TGGCTTGAGAAAAAAAATGT+AGG + chr5.4:15310077-15310096 MS.gene67557:intron 30.0%
TGTCAAATGTCATCAGAAAA+AGG - chr5.4:15310591-15310610 None:intergenic 30.0%
TTATAAGGGAAGGATTCTTA+AGG + chr5.4:15306866-15306885 MS.gene67557:CDS 30.0%
TTATAGCAGGATTTGAATGA+AGG - chr5.4:15310644-15310663 None:intergenic 30.0%
TTGAAAATTGTGATAAACCG+CGG - chr5.4:15308615-15308634 None:intergenic 30.0%
! AAATGACAGTTCCAGAATTT+TGG + chr5.4:15308422-15308441 MS.gene67557:CDS 30.0%
! AACAGATCAAATGGTTAGTT+AGG + chr5.4:15312163-15312182 MS.gene67557:intron 30.0%
! AATGACAGTTCCAGAATTTT+GGG + chr5.4:15308423-15308442 MS.gene67557:CDS 30.0%
! AATTTCCACTGAAGTTGTTT+TGG - chr5.4:15310736-15310755 None:intergenic 30.0%
! AGCTGGATTTTGCATTAATT+GGG - chr5.4:15308847-15308866 None:intergenic 30.0%
! ATTGCTATTCTATAGATGCA+TGG - chr5.4:15311952-15311971 None:intergenic 30.0%
! ATTTTTAAATGCCACCACAA+TGG + chr5.4:15308395-15308414 MS.gene67557:CDS 30.0%
! CACAGTCGATTAATTTTCAA+AGG - chr5.4:15309420-15309439 None:intergenic 30.0%
! GTATGGGTTAACAATAACAT+AGG + chr5.4:15307395-15307414 MS.gene67557:intron 30.0%
! TAGCTAAGTCTTTTATTAGG+TGG + chr5.4:15311154-15311173 MS.gene67557:intron 30.0%
! TAGCTGGATTTTGCATTAAT+TGG - chr5.4:15308848-15308867 None:intergenic 30.0%
! TCAATAGTTTATTTGGAGCA+GGG + chr5.4:15308031-15308050 MS.gene67557:CDS 30.0%
! TCGATTAATTTTCAAAGGCT+CGG - chr5.4:15309415-15309434 None:intergenic 30.0%
! TTATGTACTCAACACTGATT+GGG - chr5.4:15309163-15309182 None:intergenic 30.0%
! TTGAGTATGTGATTTGCATT+GGG + chr5.4:15310671-15310690 MS.gene67557:intron 30.0%
! TTGCTATTCTATAGATGCAT+GGG - chr5.4:15311951-15311970 None:intergenic 30.0%
! TTGTTTCTTGTAAATAGGAC+CGG - chr5.4:15307094-15307113 None:intergenic 30.0%
! TTTAATAGATTTTGCATGGC+AGG - chr5.4:15308129-15308148 None:intergenic 30.0%
! TTTGAGTATGTGATTTGCAT+TGG + chr5.4:15310670-15310689 MS.gene67557:intron 30.0%
!! AAATTCTTTGGTGTTTCAGA+GGG + chr5.4:15307572-15307591 MS.gene67557:intron 30.0%
!! ATTTCCACTGAAGTTGTTTT+GGG - chr5.4:15310735-15310754 None:intergenic 30.0%
!! CAGGAATTGATTTGTTCATA+TGG + chr5.4:15307549-15307568 MS.gene67557:intron 30.0%
!! TAACAAGCATTTGGTTTGTA+AGG - chr5.4:15308677-15308696 None:intergenic 30.0%
!!! CAAATGCTTGTTATTTTAGC+TGG + chr5.4:15308684-15308703 MS.gene67557:intron 30.0%
!!! CAGACGCTAAAACAATTTTT+TGG + chr5.4:15310412-15310431 MS.gene67557:intron 30.0%
!!! TTTTAGGGTTTACTTTCATG+AGG + chr5.4:15311612-15311631 MS.gene67557:intron 30.0%
AAAAATGACACCTTCGATGT+AGG - chr5.4:15307241-15307260 None:intergenic 35.0%
AAAACATTCGAAGAAACTCC+GGG - chr5.4:15309066-15309085 None:intergenic 35.0%
AAACCCTAAAAAAAGATGGC+AGG - chr5.4:15311603-15311622 None:intergenic 35.0%
AAATTGAAGCCTTGCATAAG+AGG - chr5.4:15311389-15311408 None:intergenic 35.0%
AACAGATATCTCTAACGTCT+TGG + chr5.4:15308962-15308981 MS.gene67557:intron 35.0%
AACATCCTTGAAGGAAACAA+CGG - chr5.4:15306802-15306821 None:intergenic 35.0%
AACATTGAATCTTCTCCTGA+GGG + chr5.4:15308330-15308349 MS.gene67557:CDS 35.0%
AACGCTTGATTTATAAGGGA+AGG + chr5.4:15306856-15306875 MS.gene67557:CDS 35.0%
AATACTCTCGGAAACAAGTT+AGG - chr5.4:15307752-15307771 None:intergenic 35.0%
ACACATTCGCTAAATACTCT+CGG - chr5.4:15307764-15307783 None:intergenic 35.0%
ACCCATACAAATGCAAATAC+TGG - chr5.4:15307383-15307402 None:intergenic 35.0%
AGTTAGGCACAGCTTAAATT+TGG - chr5.4:15311259-15311278 None:intergenic 35.0%
ATCAACATTCGTTGTTCCAA+TGG + chr5.4:15306741-15306760 MS.gene67557:CDS 35.0%
ATGTTTCTCGTAAAAAGGAC+CGG + chr5.4:15307161-15307180 MS.gene67557:intron 35.0%
ATTTCAGATATTCCTGTTGG+CGG + chr5.4:15311776-15311795 MS.gene67557:intron 35.0%
CAAGGGCAAAAAGAAATAGA+GGG - chr5.4:15311680-15311699 None:intergenic 35.0%
CAATCCTCAAACAATGAATC+AGG + chr5.4:15308896-15308915 MS.gene67557:CDS 35.0%
CAGGCAAAAAGAAATAGAGA+TGG - chr5.4:15311646-15311665 None:intergenic 35.0%
CAGTAGATCAAGTCATATGA+AGG - chr5.4:15311572-15311591 None:intergenic 35.0%
CATACAATTTATCACAGTGC+CGG - chr5.4:15309298-15309317 None:intergenic 35.0%
CATGAGTTGTATTTGAACCT+AGG + chr5.4:15310615-15310634 MS.gene67557:intron 35.0%
CTCCAGTATTTGCATTTGTA+TGG + chr5.4:15307378-15307397 MS.gene67557:intron 35.0%
CTGATTCATTGTTTGAGGAT+TGG - chr5.4:15308898-15308917 None:intergenic 35.0%
CTGTGTTTGCACATTTAAGT+AGG - chr5.4:15310540-15310559 None:intergenic 35.0%
CTTACCATTTGATCTCTCAT+GGG + chr5.4:15310142-15310161 MS.gene67557:intron 35.0%
GAAAACATTCGAAGAAACTC+CGG - chr5.4:15309067-15309086 None:intergenic 35.0%
GAAATGGATATGCTCCTAAA+TGG - chr5.4:15307611-15307630 None:intergenic 35.0%
GCAAAAAAACTGAGTTTGGT+TGG - chr5.4:15310237-15310256 None:intergenic 35.0%
GCAAAAAGAAATAGAGGGAT+GGG - chr5.4:15311675-15311694 None:intergenic 35.0%
GCAATCAACACAGTAAGTAA+CGG + chr5.4:15309819-15309838 MS.gene67557:intron 35.0%
GCCAATAAAGTCAAAGCTTT+AGG + chr5.4:15311360-15311379 MS.gene67557:intron 35.0%
GCTAATCTGAACGGAAAATT+TGG - chr5.4:15306769-15306788 None:intergenic 35.0%
GCTATAACCAAAAAAAGAGG+AGG - chr5.4:15310336-15310355 None:intergenic 35.0%
GGTGGTCTCAATAGTTTATT+TGG + chr5.4:15308024-15308043 MS.gene67557:CDS 35.0%
GTTATGTACTCAACACTGAT+TGG - chr5.4:15309164-15309183 None:intergenic 35.0%
TAGATCAAGTCATATGAAGG+AGG - chr5.4:15311569-15311588 None:intergenic 35.0%
TAGCTGCTATTAGACAACAA+TGG - chr5.4:15309510-15309529 None:intergenic 35.0%
TAGGTAAGCTACTGTATATG+TGG - chr5.4:15311841-15311860 None:intergenic 35.0%
TATCTACTGTATGCTTGGTT+GGG + chr5.4:15309982-15310001 MS.gene67557:intron 35.0%
TCATCAGAAAAAGGCCATTA+TGG - chr5.4:15310582-15310601 None:intergenic 35.0%
TCATCATGATCAACTGATCA+AGG + chr5.4:15308578-15308597 MS.gene67557:intron 35.0%
TCTATAGAATAGCAATGACG+GGG + chr5.4:15311956-15311975 MS.gene67557:intron 35.0%
TGAAAATTGTGATAAACCGC+GGG - chr5.4:15308614-15308633 None:intergenic 35.0%
TGACAATCATGATCAGCAAA+AGG - chr5.4:15310394-15310413 None:intergenic 35.0%
TGACTAATGACTGTAAGAGT+CGG + chr5.4:15309355-15309374 MS.gene67557:intron 35.0%
TGCATCATTTGAGAAATAGC+TGG - chr5.4:15308864-15308883 None:intergenic 35.0%
TGTATATGTGGTATTCATGG+CGG - chr5.4:15311829-15311848 None:intergenic 35.0%
TGTTGTCTAATAGCAGCTAT+AGG + chr5.4:15309511-15309530 MS.gene67557:intron 35.0%
TTAGTAGAAGAGGAGATGAA+GGG - chr5.4:15311489-15311508 None:intergenic 35.0%
TTGGTTTATTATACTCCCTC+CGG + chr5.4:15307072-15307091 MS.gene67557:intron 35.0%
! AACGGAAAATTTGGAACCAT+TGG - chr5.4:15306760-15306779 None:intergenic 35.0%
! AATTCTATTTTCCCGCAATC+TGG + chr5.4:15309649-15309668 MS.gene67557:intron 35.0%
! ACTTTATTGGCCTAAAGCTT+CGG - chr5.4:15311351-15311370 None:intergenic 35.0%
! AGATTGGTGATCTTAAGAGA+TGG - chr5.4:15311000-15311019 None:intergenic 35.0%
! ATCTGGGTGTTTAAGTTATG+TGG + chr5.4:15311197-15311216 MS.gene67557:intron 35.0%
! ATGACAGTTCCAGAATTTTG+GGG + chr5.4:15308424-15308443 MS.gene67557:CDS 35.0%
! ATTCTATTTTCCCGCAATCT+GGG + chr5.4:15309650-15309669 MS.gene67557:intron 35.0%
! CTCAATAGTTTATTTGGAGC+AGG + chr5.4:15308030-15308049 MS.gene67557:CDS 35.0%
! GAAAAGTTTAGGATGACAGA+AGG - chr5.4:15310702-15310721 None:intergenic 35.0%
! GCCTAAAGCTTTGACTTTAT+TGG - chr5.4:15311364-15311383 None:intergenic 35.0%
! TGAGTATGTGATTTGCATTG+GGG + chr5.4:15310672-15310691 MS.gene67557:intron 35.0%
! TTTACTATTTGCTACTGGCT+GGG + chr5.4:15310817-15310836 MS.gene67557:intron 35.0%
!! AATTCTTTGGTGTTTCAGAG+GGG + chr5.4:15307573-15307592 MS.gene67557:intron 35.0%
!! ATTAGGAAGTGGGTTAGTAT+TGG - chr5.4:15308523-15308542 None:intergenic 35.0%
!! GAAATTCTTTGGTGTTTCAG+AGG + chr5.4:15307571-15307590 MS.gene67557:intron 35.0%
!! GCAAAACCGTTATTGATTCT+TGG + chr5.4:15310184-15310203 MS.gene67557:intron 35.0%
!! TCTATTTCTTTTTGCCTGAC+TGG + chr5.4:15311648-15311667 MS.gene67557:intron 35.0%
!! TTAGGAAGTGGGTTAGTATT+GGG - chr5.4:15308522-15308541 None:intergenic 35.0%
!! TTATTATTGGTGTCACCATG+CGG + chr5.4:15307305-15307324 MS.gene67557:intron 35.0%
!! TTTCCACTGAAGTTGTTTTG+GGG - chr5.4:15310734-15310753 None:intergenic 35.0%
!!! ATGCCTGCCATCTTTTTTTA+GGG + chr5.4:15311597-15311616 MS.gene67557:intron 35.0%
!!! ATGCTTGTTATTTTAGCTGG+AGG + chr5.4:15308687-15308706 MS.gene67557:intron 35.0%
!!! TATGCCTGCCATCTTTTTTT+AGG + chr5.4:15311596-15311615 MS.gene67557:intron 35.0%
!!! TTTCTTGCCTCCTCTTTTTT+TGG + chr5.4:15310326-15310345 MS.gene67557:intron 35.0%
AAAATGATGCGCTTTGTGCA+GGG + chr5.4:15310846-15310865 MS.gene67557:intron 40.0%
AAAGCTCATCCAACTACACA+CGG - chr5.4:15310309-15310328 None:intergenic 40.0%
AACTCGTGTCCTATCAACTA+TGG + chr5.4:15309746-15309765 MS.gene67557:intron 40.0%
AATTGAGGCCTTAGTAGAAG+AGG - chr5.4:15311499-15311518 None:intergenic 40.0%
ACATTGAATCTTCTCCTGAG+GGG + chr5.4:15308331-15308350 MS.gene67557:CDS 40.0%
ACTATCCAACCACTAGATCT+AGG - chr5.4:15309382-15309401 None:intergenic 40.0%
AGATCATGCGTGAAATGATG+AGG + chr5.4:15308286-15308305 MS.gene67557:CDS 40.0%
AGCATTAGTAGTGGTCGTAT+TGG - chr5.4:15307905-15307924 None:intergenic 40.0%
AGCATTAGTAGTTGAGGGAT+TGG - chr5.4:15308481-15308500 None:intergenic 40.0%
ATCATTTCACGCATGATCTC+AGG - chr5.4:15308285-15308304 None:intergenic 40.0%
ATGACCAAGGATTAGGAAGT+GGG - chr5.4:15308533-15308552 None:intergenic 40.0%
ATGTTATCGAGCATGTTTGG+TGG + chr5.4:15312112-15312131 MS.gene67557:CDS 40.0%
CAACATGCAGCACAGTATTT+GGG - chr5.4:15311867-15311886 None:intergenic 40.0%
CAACATTGAATCTTCTCCTG+AGG + chr5.4:15308329-15308348 MS.gene67557:CDS 40.0%
CAAGCTCTTATGACTCAACT+TGG + chr5.4:15309790-15309809 MS.gene67557:CDS 40.0%
CAGCACAGTATTTGGGTATT+AGG - chr5.4:15311860-15311879 None:intergenic 40.0%
CATATGAAGGAGGAGATGAA+GGG - chr5.4:15311559-15311578 None:intergenic 40.0%
CATTTACATGGCCAACCAAA+GGG + chr5.4:15311311-15311330 MS.gene67557:intron 40.0%
CCAAGCATACAGTAGATACA+AGG - chr5.4:15309980-15309999 None:intergenic 40.0%
CCATGAGAGATCAAATGGTA+AGG - chr5.4:15310144-15310163 None:intergenic 40.0%
CCTTACCATTTGATCTCTCA+TGG + chr5.4:15310141-15310160 MS.gene67557:intron 40.0%
CCTTGTATCTACTGTATGCT+TGG + chr5.4:15309977-15309996 MS.gene67557:intron 40.0%
CTATAGAATAGCAATGACGG+GGG + chr5.4:15311957-15311976 MS.gene67557:intron 40.0%
CTGAGCAATAACATCCTTGA+AGG - chr5.4:15306811-15306830 None:intergenic 40.0%
CTTAGTAGAAGAGGAGATGA+AGG - chr5.4:15311490-15311509 None:intergenic 40.0%
CTTCATCTCCTCTTCTACTA+AGG + chr5.4:15311488-15311507 MS.gene67557:intron 40.0%
GAAAATTGTGATAAACCGCG+GGG - chr5.4:15308613-15308632 None:intergenic 40.0%
GAAACATGGATGTGCCAAAA+TGG + chr5.4:15309940-15309959 MS.gene67557:intron 40.0%
GAGATGTTATCGAGCATGTT+TGG + chr5.4:15312109-15312128 MS.gene67557:CDS 40.0%
GATCAAACGCTTCAAAGCTA+TGG + chr5.4:15306891-15306910 MS.gene67557:CDS 40.0%
GATTTGAATGAAGGAACCCT+AGG - chr5.4:15310635-15310654 None:intergenic 40.0%
GCAAGGGCAAAAAGAAATAG+AGG - chr5.4:15311681-15311700 None:intergenic 40.0%
GCCAACAGGAATATCTGAAA+TGG - chr5.4:15311777-15311796 None:intergenic 40.0%
GCCATTTCAGATATTCCTGT+TGG + chr5.4:15311773-15311792 MS.gene67557:intron 40.0%
GCTGTTCCAAACAGATCAAA+TGG + chr5.4:15312154-15312173 MS.gene67557:CDS 40.0%
GCTTCAGCATTAGTAGTTGA+GGG - chr5.4:15308486-15308505 None:intergenic 40.0%
GGACCCACTATATCTCTAAA+TGG + chr5.4:15307693-15307712 MS.gene67557:intron 40.0%
GGCAAAAAGAAATAGAGGGA+TGG - chr5.4:15311676-15311695 None:intergenic 40.0%
GGGCAGGTTAAGAAAAGTTT+AGG - chr5.4:15310713-15310732 None:intergenic 40.0%
GGTTTACTTTCATGAGGTGT+GGG + chr5.4:15311618-15311637 MS.gene67557:intron 40.0%
GTATATGTGGTATTCATGGC+GGG - chr5.4:15311828-15311847 None:intergenic 40.0%
GTATCTACTGTATGCTTGGT+TGG + chr5.4:15309981-15310000 MS.gene67557:intron 40.0%
GTATGAATACTGATCAGCGT+GGG + chr5.4:15309002-15309021 MS.gene67557:CDS 40.0%
GTGATCTTAAGAGATGGTCA+AGG - chr5.4:15310994-15311013 None:intergenic 40.0%
TAAAATGATGCGCTTTGTGC+AGG + chr5.4:15310845-15310864 MS.gene67557:intron 40.0%
TAGATCTAGTGGTTGGATAG+TGG + chr5.4:15309381-15309400 MS.gene67557:intron 40.0%
TATATGTGGTATTCATGGCG+GGG - chr5.4:15311827-15311846 None:intergenic 40.0%
TATGGCGGTTGCCATTATAA+TGG - chr5.4:15311804-15311823 None:intergenic 40.0%
TCATATGAAGGAGGAGATGA+AGG - chr5.4:15311560-15311579 None:intergenic 40.0%
TCATTTCACGCATGATCTCA+GGG - chr5.4:15308284-15308303 None:intergenic 40.0%
TGACACGCAAGAGAACTTAA+GGG + chr5.4:15312326-15312345 MS.gene67557:CDS 40.0%
TGATCTCCTGACATTAGTGT+GGG - chr5.4:15308715-15308734 None:intergenic 40.0%
TGCAATTGTTCAAGATCTGG+AGG - chr5.4:15308057-15308076 None:intergenic 40.0%
TGCTGCAATTGTTCAAGATC+TGG - chr5.4:15308060-15308079 None:intergenic 40.0%
TGCTTCAGCATTAGTAGTTG+AGG - chr5.4:15308487-15308506 None:intergenic 40.0%
TGGATACGAAGGATTCAGTT+AGG - chr5.4:15311275-15311294 None:intergenic 40.0%
TTCTTGTAAATAGGACCGGA+GGG - chr5.4:15307090-15307109 None:intergenic 40.0%
TTGACACGCAAGAGAACTTA+AGG + chr5.4:15312325-15312344 MS.gene67557:CDS 40.0%
TTGATCTCCTGACATTAGTG+TGG - chr5.4:15308716-15308735 None:intergenic 40.0%
TTGTACTGAATCGTGTATCG+TGG - chr5.4:15309567-15309586 None:intergenic 40.0%
TTTCTTGTAAATAGGACCGG+AGG - chr5.4:15307091-15307110 None:intergenic 40.0%
! CTATGCTCTGTTAGTCTGTT+TGG + chr5.4:15310942-15310961 MS.gene67557:intron 40.0%
! GTTTACTATTTGCTACTGGC+TGG + chr5.4:15310816-15310835 MS.gene67557:intron 40.0%
! TAATTTTCAAAGGCTCGGCT+AGG - chr5.4:15309410-15309429 None:intergenic 40.0%
! TACATGAGCACCTACCATTT+TGG - chr5.4:15309957-15309976 None:intergenic 40.0%
! TATCTGAAATGGCGAATGAG+AGG - chr5.4:15311703-15311722 None:intergenic 40.0%
! TCTGTGGGTTACTCATTAGA+AGG - chr5.4:15308173-15308192 None:intergenic 40.0%
! TTGATCTGTTTGGAACAGCT+AGG - chr5.4:15312153-15312172 None:intergenic 40.0%
! TTTAAGTTATGTGGCCCTTG+AGG + chr5.4:15311206-15311225 MS.gene67557:intron 40.0%
!! TATTATTGGTGTCACCATGC+GGG + chr5.4:15307306-15307325 MS.gene67557:intron 40.0%
!!! TTCCACTGAAGTTGTTTTGG+GGG - chr5.4:15310733-15310752 None:intergenic 40.0%
AAACACAGCCTAGATGGGTA+TGG + chr5.4:15310552-15310571 MS.gene67557:intron 45.0%
AAATGGCGAATGAGAGGCAA+GGG - chr5.4:15311697-15311716 None:intergenic 45.0%
AAGCTCATCCAACTACACAC+GGG - chr5.4:15310308-15310327 None:intergenic 45.0%
AAGTCCTAAGAGATGTGCGA+GGG - chr5.4:15310270-15310289 None:intergenic 45.0%
AATAAAGGGGATCTCGGGAT+TGG + chr5.4:15310030-15310049 MS.gene67557:intron 45.0%
ACCTTGAGTCCCCAAAATTC+TGG - chr5.4:15308436-15308455 None:intergenic 45.0%
ACTACTAATGCTAGAGCTGC+TGG + chr5.4:15307913-15307932 MS.gene67557:CDS 45.0%
AGAATCCCATCTCTTGAAGC+TGG - chr5.4:15312305-15312324 None:intergenic 45.0%
AGGGCTCTTATTGCTACATC+AGG + chr5.4:15312345-15312364 MS.gene67557:CDS 45.0%
AGTAGGACCAGTGAACAACT+TGG + chr5.4:15312081-15312100 MS.gene67557:intron 45.0%
ATCAGGGAATGTTCATGCAG+CGG + chr5.4:15312362-15312381 MS.gene67557:CDS 45.0%
ATCCTTGAAGGAAACAACGG+TGG - chr5.4:15306799-15306818 None:intergenic 45.0%
ATGGGTATGGCTCACCATAA+TGG + chr5.4:15310565-15310584 MS.gene67557:intron 45.0%
ATGTGCAAACACAGCCTAGA+TGG + chr5.4:15310546-15310565 MS.gene67557:intron 45.0%
ATTAGCCCCACCAGTTGTAT+TGG - chr5.4:15307872-15307891 None:intergenic 45.0%
ATTATAATGGCACCGCCAAC+AGG - chr5.4:15311791-15311810 None:intergenic 45.0%
CATGGATGTGCCAAAATGGT+AGG + chr5.4:15309944-15309963 MS.gene67557:intron 45.0%
CCAGTCAGGCATATCTGAAA+TGG - chr5.4:15311714-15311733 None:intergenic 45.0%
CCATAAGCTCTTGCATCTGT+GGG - chr5.4:15308188-15308207 None:intergenic 45.0%
CCATTTACATGGCCAACCAA+AGG + chr5.4:15311310-15311329 MS.gene67557:intron 45.0%
CCATTTCAGATATGCCTGAC+TGG + chr5.4:15311711-15311730 MS.gene67557:intron 45.0%
CTAACCCACTTCCTAATCCT+TGG + chr5.4:15308526-15308545 MS.gene67557:CDS 45.0%
CTATCTAGCACCTACATCGA+AGG + chr5.4:15307228-15307247 MS.gene67557:intron 45.0%
CTGAATCGTGTATCGTGGAA+CGG - chr5.4:15309562-15309581 None:intergenic 45.0%
CTGGATGATGCAATTGCCAT+TGG + chr5.4:15311998-15312017 MS.gene67557:intron 45.0%
CTTACCCAGCTTCAAGAGAT+GGG + chr5.4:15312297-15312316 MS.gene67557:CDS 45.0%
CTTCGATGTAGGTGCTAGAT+AGG - chr5.4:15307230-15307249 None:intergenic 45.0%
GAATCCCATCTCTTGAAGCT+GGG - chr5.4:15312304-15312323 None:intergenic 45.0%
GAGAGAAGTGATGCAAAACC+CGG + chr5.4:15309045-15309064 MS.gene67557:CDS 45.0%
GAGTTGCTGCCATAGTTGAT+AGG - chr5.4:15309758-15309777 None:intergenic 45.0%
GATACGGCGTGATGTTTGTT+GGG + chr5.4:15310052-15310071 MS.gene67557:intron 45.0%
GATGACCAAGGATTAGGAAG+TGG - chr5.4:15308534-15308553 None:intergenic 45.0%
GCAACATGCAGCACAGTATT+TGG - chr5.4:15311868-15311887 None:intergenic 45.0%
GGAATCGAGGCTAATCTGAA+CGG - chr5.4:15306778-15306797 None:intergenic 45.0%
GGCAATAAAGCCGAAGCTTT+AGG + chr5.4:15311338-15311357 MS.gene67557:intron 45.0%
GGGCTCTTATTGCTACATCA+GGG + chr5.4:15312346-15312365 MS.gene67557:CDS 45.0%
GGGTTTACTTTCATGAGGTG+TGG + chr5.4:15311617-15311636 MS.gene67557:intron 45.0%
GGTATGAATACTGATCAGCG+TGG + chr5.4:15309001-15309020 MS.gene67557:CDS 45.0%
GGTTAGGATCGTCTCCATTT+AGG + chr5.4:15307594-15307613 MS.gene67557:intron 45.0%
GTAGCATACAATGTCTCTGG+AGG - chr5.4:15312273-15312292 None:intergenic 45.0%
GTAGGACCAGTGAACAACTT+GGG + chr5.4:15312082-15312101 MS.gene67557:intron 45.0%
GTGTTGTCAATCCCAGATTG+CGG - chr5.4:15309664-15309683 None:intergenic 45.0%
GTTGATCTTAACTCCTCCGT+CGG - chr5.4:15306727-15306746 None:intergenic 45.0%
TAGAAGGTTGCGCACTATCT+CGG - chr5.4:15308157-15308176 None:intergenic 45.0%
TAGGACCAGTGAACAACTTG+GGG + chr5.4:15312083-15312102 MS.gene67557:intron 45.0%
TATGAATGCCCGTGTGTAGT+TGG + chr5.4:15310297-15310316 MS.gene67557:intron 45.0%
TATGGATAGAAACCCTGAGC+TGG + chr5.4:15308203-15308222 MS.gene67557:CDS 45.0%
TCCATAAGCTCTTGCATCTG+TGG - chr5.4:15308189-15308208 None:intergenic 45.0%
TGGGTAGCATACAATGTCTC+TGG - chr5.4:15312276-15312295 None:intergenic 45.0%
TGTCGACAATCAATGGAACG+TGG + chr5.4:15307425-15307444 MS.gene67557:intron 45.0%
TGTGCAAACACAGCCTAGAT+GGG + chr5.4:15310547-15310566 MS.gene67557:intron 45.0%
TGTTGTCAATCCCAGATTGC+GGG - chr5.4:15309663-15309682 None:intergenic 45.0%
TTAAATGCCACCACAATGGC+AGG + chr5.4:15308399-15308418 MS.gene67557:CDS 45.0%
TTACTTGGAGCAGATGACCA+AGG - chr5.4:15308546-15308565 None:intergenic 45.0%
TTCTCACACTCTCTCATCTG+TGG - chr5.4:15310113-15310132 None:intergenic 45.0%
TTCTCGTAAAAAGGACCGGA+GGG + chr5.4:15307165-15307184 MS.gene67557:intron 45.0%
TTCTTGTAGCCTCAAGTGTC+TGG - chr5.4:15308260-15308279 None:intergenic 45.0%
TTGAAGCCTTGCATAAGAGG+AGG - chr5.4:15311386-15311405 None:intergenic 45.0%
TTGGAGCTTCACTGTTTCCA+GGG + chr5.4:15307971-15307990 MS.gene67557:CDS 45.0%
TTTACGCCTGCCAATACAAC+TGG + chr5.4:15307859-15307878 MS.gene67557:CDS 45.0%
TTTAGGCCTCCTCTTATGCA+AGG + chr5.4:15311377-15311396 MS.gene67557:intron 45.0%
TTTCTCGTAAAAAGGACCGG+AGG + chr5.4:15307164-15307183 MS.gene67557:intron 45.0%
! ACTGTCATTTCCTGCCATTG+TGG - chr5.4:15308412-15308431 None:intergenic 45.0%
! AGCAGCTCTAGCATTAGTAG+TGG - chr5.4:15307914-15307933 None:intergenic 45.0%
! ATGCAGAGAGCATGTAGAAG+AGG - chr5.4:15311089-15311108 None:intergenic 45.0%
! CCTTTGGTTGGCCATGTAAA+TGG - chr5.4:15311313-15311332 None:intergenic 45.0%
! TTCCACCGTTGTTTCCTTCA+AGG + chr5.4:15306794-15306813 MS.gene67557:CDS 45.0%
!! AATGACGGGGGAGGTTTTTA+AGG + chr5.4:15311969-15311988 MS.gene67557:intron 45.0%
!! AGAATTTTGGGGACTCAAGG+TGG + chr5.4:15308435-15308454 MS.gene67557:CDS 45.0%
!! AGTGGGTTAGTATTGGGTAC+AGG - chr5.4:15308516-15308535 None:intergenic 45.0%
!! ATGACGGGGGAGGTTTTTAA+GGG + chr5.4:15311970-15311989 MS.gene67557:intron 45.0%
!! CTAGGAGGTATCAATGGGAT+GGG + chr5.4:15307994-15308013 MS.gene67557:CDS 45.0%
!! GTGGGTTAGTATTGGGTACA+GGG - chr5.4:15308515-15308534 None:intergenic 45.0%
!! TCCAGAATTTTGGGGACTCA+AGG + chr5.4:15308432-15308451 MS.gene67557:CDS 45.0%
!! TGAGTCAGCCTTGCTTTTGA+AGG + chr5.4:15311924-15311943 MS.gene67557:intron 45.0%
!! TGGGTTAGTATTGGGTACAG+GGG - chr5.4:15308514-15308533 None:intergenic 45.0%
!! TGTTGGCGGTGCCATTATAA+TGG + chr5.4:15311790-15311809 MS.gene67557:intron 45.0%
!! TTTGGTGTTTCAGAGGGGTT+AGG + chr5.4:15307578-15307597 MS.gene67557:intron 45.0%
!! TATAAAATAATAATTAATAG+TGG + chr5.4:15307668-15307687 MS.gene67557:intron 5.0%
AACAGTGAAGCTCCAAGTCC+AGG - chr5.4:15307967-15307986 None:intergenic 50.0%
ACCAGTGAACAACTTGGGGT+TGG + chr5.4:15312087-15312106 MS.gene67557:CDS 50.0%
AGAAGGTTGCGCACTATCTC+GGG - chr5.4:15308156-15308175 None:intergenic 50.0%
AGAGTCGGACCTAGATCTAG+TGG + chr5.4:15309370-15309389 MS.gene67557:intron 50.0%
AGCGCCCATGAGAGATCAAA+TGG - chr5.4:15310149-15310168 None:intergenic 50.0%
AGGAAACAACGGTGGAATCG+AGG - chr5.4:15306791-15306810 None:intergenic 50.0%
AGGCTGCCCAGGTTTATAAG+TGG + chr5.4:15311439-15311458 MS.gene67557:intron 50.0%
AGTTATGTGGCCCTTGAGGT+AGG + chr5.4:15311210-15311229 MS.gene67557:intron 50.0%
ATGGTGAGCCATACCCATCT+AGG - chr5.4:15310563-15310582 None:intergenic 50.0%
CAAGTCCTAAGAGATGTGCG+AGG - chr5.4:15310271-15310290 None:intergenic 50.0%
CCCACAGATGCAAGAGCTTA+TGG + chr5.4:15308185-15308204 MS.gene67557:CDS 50.0%
CTCAGCATGTTAAACCCCTC+AGG - chr5.4:15308348-15308367 None:intergenic 50.0%
CTCTTGAAGCTGGGTAAGCT+GGG - chr5.4:15312295-15312314 None:intergenic 50.0%
CTGAGGGGTTTAACATGCTG+AGG + chr5.4:15308346-15308365 MS.gene67557:CDS 50.0%
CTTGGAGCTTCACTGTTTCC+AGG + chr5.4:15307970-15307989 MS.gene67557:CDS 50.0%
CTTGGTATGCCAGATCTCGA+AGG + chr5.4:15308786-15308805 MS.gene67557:CDS 50.0%
GAAATGGCGAATGAGAGGCA+AGG - chr5.4:15311698-15311717 None:intergenic 50.0%
GCATGGGACCTTCAAAAGCA+AGG - chr5.4:15311935-15311954 None:intergenic 50.0%
GCGTAAAGCCACGAACCAAA+TGG - chr5.4:15307846-15307865 None:intergenic 50.0%
GCTTACCCAGCTTCAAGAGA+TGG + chr5.4:15312296-15312315 MS.gene67557:CDS 50.0%
GGAAGACATCGAGGAGAGAT+CGG - chr5.4:15312245-15312264 None:intergenic 50.0%
GGAGCAGATGACCAAGGATT+AGG - chr5.4:15308540-15308559 None:intergenic 50.0%
GGAGGAGATGAAGGGTTACT+TGG - chr5.4:15311551-15311570 None:intergenic 50.0%
GGATACGGCGTGATGTTTGT+TGG + chr5.4:15310051-15310070 MS.gene67557:intron 50.0%
GGCAGATCACACTGTCCATT+TGG + chr5.4:15307828-15307847 MS.gene67557:CDS 50.0%
GGCTGCCCAGGTTTATAAGT+GGG + chr5.4:15311440-15311459 MS.gene67557:intron 50.0%
GTCATTTCCTGCCATTGTGG+TGG - chr5.4:15308409-15308428 None:intergenic 50.0%
GTTATGTGGCCCTTGAGGTA+GGG + chr5.4:15311211-15311230 MS.gene67557:intron 50.0%
TATACATGTAGAGGCTGCCC+AGG + chr5.4:15311428-15311447 MS.gene67557:intron 50.0%
TATTGCCCATGCCCTTTGGT+TGG - chr5.4:15311325-15311344 None:intergenic 50.0%
TCAAGGAACTTAATGCCCCG+CGG + chr5.4:15308595-15308614 MS.gene67557:intron 50.0%
TCCAACCCCAAGTTGTTCAC+TGG - chr5.4:15312091-15312110 None:intergenic 50.0%
TCGGACCTAGATCTAGTGGT+TGG + chr5.4:15309374-15309393 MS.gene67557:intron 50.0%
TCTCTTGAAGCTGGGTAAGC+TGG - chr5.4:15312296-15312315 None:intergenic 50.0%
TCTGCCTACCTGCATTGTCT+CGG - chr5.4:15309095-15309114 None:intergenic 50.0%
TGAGTATGTGTGCCAGCTCA+GGG - chr5.4:15308218-15308237 None:intergenic 50.0%
TGCCCCCAAAACAACTTCAG+TGG + chr5.4:15310728-15310747 MS.gene67557:intron 50.0%
TGGGTCAATGAACCAGCATC+TGG - chr5.4:15308828-15308847 None:intergenic 50.0%
TTGAGTATGTGTGCCAGCTC+AGG - chr5.4:15308219-15308238 None:intergenic 50.0%
! ACAATGTCTCTGGAGGCTCT+GGG - chr5.4:15312266-15312285 None:intergenic 50.0%
! AGAGCTGCTGGTGCTAATGA+GGG + chr5.4:15307925-15307944 MS.gene67557:CDS 50.0%
! CACACTGTCCATTTGGTTCG+TGG + chr5.4:15307835-15307854 MS.gene67557:CDS 50.0%
! CCAGATCTCGAAGGCATGTT+GGG + chr5.4:15308795-15308814 MS.gene67557:CDS 50.0%
! GCTTTATTGCCCATGCCCTT+TGG - chr5.4:15311329-15311348 None:intergenic 50.0%
! TACAATGTCTCTGGAGGCTC+TGG - chr5.4:15312267-15312286 None:intergenic 50.0%
! TAGAATAGCAATGACGGGGG+AGG + chr5.4:15311960-15311979 MS.gene67557:intron 50.0%
! TAGAGCTGCTGGTGCTAATG+AGG + chr5.4:15307924-15307943 MS.gene67557:CDS 50.0%
! TGGTCGATGGATTCCTCGTT+TGG - chr5.4:15308461-15308480 None:intergenic 50.0%
! TTTTCAAAGGCTCGGCTAGG+AGG - chr5.4:15309407-15309426 None:intergenic 50.0%
!! ATGTTTGGTGGACTTGGAGC+TGG + chr5.4:15312124-15312143 MS.gene67557:CDS 50.0%
!! CAGGGCTAGGAGGTATCAAT+GGG + chr5.4:15307989-15308008 MS.gene67557:CDS 50.0%
!! GAGCGACTTTTGGGAAACTC+TGG + chr5.4:15312387-15312406 MS.gene67557:CDS 50.0%
!! GCTAGGAGGTATCAATGGGA+TGG + chr5.4:15307993-15308012 MS.gene67557:CDS 50.0%
!! GTAGTTGAGGGATTGGTCGA+TGG - chr5.4:15308474-15308493 None:intergenic 50.0%
!! TCGAGCATGTTTGGTGGACT+TGG + chr5.4:15312118-15312137 MS.gene67557:CDS 50.0%
!! TGACGGGGGAGGTTTTTAAG+GGG + chr5.4:15311971-15311990 MS.gene67557:intron 50.0%
!!! ACTGAAGTTGTTTTGGGGGC+AGG - chr5.4:15310729-15310748 None:intergenic 50.0%
AATGAGGGTGGGGGATTAGG+AGG + chr5.4:15307940-15307959 MS.gene67557:CDS 55.0%
ACATGGCCAACCAAAGGGCA+TGG + chr5.4:15311316-15311335 MS.gene67557:intron 55.0%
ACGCCTGCCAATACAACTGG+TGG + chr5.4:15307862-15307881 MS.gene67557:CDS 55.0%
ACTGGTGGGGCTAATACCAC+TGG + chr5.4:15307877-15307896 MS.gene67557:CDS 55.0%
AGGGAACCAGGTCAAACAGG+TGG + chr5.4:15310865-15310884 MS.gene67557:intron 55.0%
AGTGTCTGGCGAAGTGTGCT+AGG - chr5.4:15308246-15308265 None:intergenic 55.0%
ATAGAGGGATGGGACCAGTC+AGG - chr5.4:15311665-15311684 None:intergenic 55.0%
ATCAATGGGATGGGAGGAGG+TGG + chr5.4:15308003-15308022 MS.gene67557:CDS 55.0%
CACACTTCGCCAGACACTTG+AGG + chr5.4:15308248-15308267 MS.gene67557:CDS 55.0%
CACCTACTGCTGCAGATGCT+TGG + chr5.4:15308736-15308755 MS.gene67557:CDS 55.0%
CCATTGATACCTCCTAGCCC+TGG - chr5.4:15307991-15308010 None:intergenic 55.0%
CCCAACATGCCTTCGAGATC+TGG - chr5.4:15308798-15308817 None:intergenic 55.0%
CGCCTGCCAATACAACTGGT+GGG + chr5.4:15307863-15307882 MS.gene67557:CDS 55.0%
CTGCCTACCTGCATTGTCTC+GGG - chr5.4:15309094-15309113 None:intergenic 55.0%
GAACCAGGTCAAACAGGTGG+AGG + chr5.4:15310868-15310887 MS.gene67557:CDS 55.0%
GACTCCCTCGCACATCTCTT+AGG + chr5.4:15310263-15310282 MS.gene67557:intron 55.0%
GATCTTAACTCCTCCGTCGG+TGG - chr5.4:15306724-15306743 None:intergenic 55.0%
GCCTGCCAATACAACTGGTG+GGG + chr5.4:15307864-15307883 MS.gene67557:CDS 55.0%
GCTAATGAGGGTGGGGGATT+AGG + chr5.4:15307937-15307956 MS.gene67557:CDS 55.0%
GCTTCACTGTTTCCAGGGCT+AGG + chr5.4:15307976-15307995 MS.gene67557:CDS 55.0%
GGATTAGGAGGACCTGGACT+TGG + chr5.4:15307952-15307971 MS.gene67557:CDS 55.0%
GGGGATCTCGGGATTGGATA+CGG + chr5.4:15310036-15310055 MS.gene67557:intron 55.0%
GGTATCAATGGGATGGGAGG+AGG + chr5.4:15308000-15308019 MS.gene67557:CDS 55.0%
TACCTGCATTGTCTCGGGTG+AGG - chr5.4:15309089-15309108 None:intergenic 55.0%
TCACCCGAGACAATGCAGGT+AGG + chr5.4:15309088-15309107 MS.gene67557:intron 55.0%
TCACTGTTTCCAGGGCTAGG+AGG + chr5.4:15307979-15307998 MS.gene67557:CDS 55.0%
TGCAGGGAACCAGGTCAAAC+AGG + chr5.4:15310862-15310881 MS.gene67557:intron 55.0%
TGCCAAGCATCTGCAGCAGT+AGG - chr5.4:15308741-15308760 None:intergenic 55.0%
TTCCTCACCCGAGACAATGC+AGG + chr5.4:15309084-15309103 MS.gene67557:CDS 55.0%
TTGGGTGGTATGCCAGATGC+TGG + chr5.4:15308813-15308832 MS.gene67557:CDS 55.0%
! AGTGGTCGTATTGGCACCAG+TGG - chr5.4:15307896-15307915 None:intergenic 55.0%
! CATGGCCAACCAAAGGGCAT+GGG + chr5.4:15311317-15311336 MS.gene67557:intron 55.0%
! CTGCTGGTGCTAATGAGGGT+GGG + chr5.4:15307929-15307948 MS.gene67557:CDS 55.0%
! GAGGTGCCCACACTAATGTC+AGG + chr5.4:15308706-15308725 MS.gene67557:CDS 55.0%
! GATCTCGAAGGCATGTTGGG+TGG + chr5.4:15308798-15308817 MS.gene67557:CDS 55.0%
! GCAGCGGTTGAGCGACTTTT+GGG + chr5.4:15312378-15312397 MS.gene67557:CDS 55.0%
! GCCAGATCTCGAAGGCATGT+TGG + chr5.4:15308794-15308813 MS.gene67557:CDS 55.0%
! GGCGTGATGTTTGTTGGGCA+TGG + chr5.4:15310057-15310076 MS.gene67557:intron 55.0%
! GTATTCATGGCGGGGTATGG+CGG - chr5.4:15311819-15311838 None:intergenic 55.0%
! GTGGTATTCATGGCGGGGTA+TGG - chr5.4:15311822-15311841 None:intergenic 55.0%
! TGCAGCGGTTGAGCGACTTT+TGG + chr5.4:15312377-15312396 MS.gene67557:CDS 55.0%
! TGCTGGTGCTAATGAGGGTG+GGG + chr5.4:15307930-15307949 MS.gene67557:CDS 55.0%
!! AAGGCACTGCCCTACCTCAA+GGG - chr5.4:15311223-15311242 None:intergenic 55.0%
!! CCAGGGCTAGGAGGTATCAA+TGG + chr5.4:15307988-15308007 MS.gene67557:CDS 55.0%
!! GACGGGGGAGGTTTTTAAGG+GGG + chr5.4:15311972-15311991 MS.gene67557:intron 55.0%
!! GAGGTTTTTAAGGGGGCAGC+TGG + chr5.4:15311979-15311998 MS.gene67557:intron 55.0%
!! GGAGGTATCAATGGGATGGG+AGG + chr5.4:15307997-15308016 MS.gene67557:CDS 55.0%
!! TAAGGCACTGCCCTACCTCA+AGG - chr5.4:15311224-15311243 None:intergenic 55.0%
AATGGGATGGGAGGAGGTGG+TGG + chr5.4:15308006-15308025 MS.gene67557:CDS 60.0%
ACGGAGCCACAATCCACCGA+CGG + chr5.4:15306708-15306727 MS.gene67557:CDS 60.0%
CCATGCGGGTGACACGTTTC+AGG + chr5.4:15307320-15307339 MS.gene67557:intron 60.0%
CCTGAAACGTGTCACCCGCA+TGG - chr5.4:15307323-15307342 None:intergenic 60.0%
CGCAACCGCTGAAACCACCA+CGG + chr5.4:15306689-15306708 MS.gene67557:CDS 60.0%
GGACTCAAGGTGGCCAAACG+AGG + chr5.4:15308445-15308464 MS.gene67557:CDS 60.0%
GTGCCTCCACCTGTTTGACC+TGG - chr5.4:15310874-15310893 None:intergenic 60.0%
TGCGCTTTGTGCAGGGAACC+AGG + chr5.4:15310853-15310872 MS.gene67557:intron 60.0%
TGGCTCCGTGGTGGTTTCAG+CGG - chr5.4:15306697-15306716 None:intergenic 60.0%
! GCCCCACCAGTTGTATTGGC+AGG - chr5.4:15307868-15307887 None:intergenic 60.0%
! GCTGCTGGTGCTAATGAGGG+TGG + chr5.4:15307928-15307947 MS.gene67557:CDS 60.0%
! GCTGGTGCTAATGAGGGTGG+GGG + chr5.4:15307931-15307950 MS.gene67557:CDS 60.0%
! GGTCAAACAGGTGGAGGCAC+TGG + chr5.4:15310874-15310893 MS.gene67557:CDS 60.0%
!! ACTCCTCCGTCGGTGGATTG+TGG - chr5.4:15306717-15306736 None:intergenic 60.0%
!! AGACACCCACTGGCTTAGGC+GGG + chr5.4:15308763-15308782 MS.gene67557:CDS 60.0%
!! CAGACACCCACTGGCTTAGG+CGG + chr5.4:15308762-15308781 MS.gene67557:CDS 60.0%
!! CAGCAGACACCCACTGGCTT+AGG + chr5.4:15308759-15308778 MS.gene67557:CDS 60.0%
!! GAGGCTCTGGGAAGACATCG+AGG - chr5.4:15312254-15312273 None:intergenic 60.0%
ACCAAGCCCGCCTAAGCCAG+TGG - chr5.4:15308772-15308791 None:intergenic 65.0%
CCAAGCCCGCCTAAGCCAGT+GGG - chr5.4:15308771-15308790 None:intergenic 65.0%
GAGCCACAATCCACCGACGG+AGG + chr5.4:15306711-15306730 MS.gene67557:CDS 65.0%
GCTTGGCAGCAGACACCCAC+TGG + chr5.4:15308753-15308772 MS.gene67557:CDS 65.0%
GGTGGGGGATTAGGAGGACC+TGG + chr5.4:15307946-15307965 MS.gene67557:CDS 65.0%
!! GGTGGATTGTGGCTCCGTGG+TGG - chr5.4:15306706-15306725 None:intergenic 65.0%
!! GTCGGTGGATTGTGGCTCCG+TGG - chr5.4:15306709-15306728 None:intergenic 65.0%
!! CCCACTGGCTTAGGCGGGCT+TGG + chr5.4:15308768-15308787 MS.gene67557:CDS 70.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 15306678 15312416 15306678 ID=MS.gene67557
chr5.4 mRNA 15306678 15312416 15306678 ID=MS.gene67557.t1;Parent=MS.gene67557
chr5.4 exon 15306678 15306912 15306678 ID=MS.gene67557.t1.exon1;Parent=MS.gene67557.t1
chr5.4 CDS 15306678 15306912 15306678 ID=cds.MS.gene67557.t1;Parent=MS.gene67557.t1
chr5.4 exon 15307821 15308561 15307821 ID=MS.gene67557.t1.exon2;Parent=MS.gene67557.t1
chr5.4 CDS 15307821 15308561 15307821 ID=cds.MS.gene67557.t1;Parent=MS.gene67557.t1
chr5.4 exon 15308703 15308917 15308703 ID=MS.gene67557.t1.exon3;Parent=MS.gene67557.t1
chr5.4 CDS 15308703 15308917 15308703 ID=cds.MS.gene67557.t1;Parent=MS.gene67557.t1
chr5.4 exon 15308995 15309105 15308995 ID=MS.gene67557.t1.exon4;Parent=MS.gene67557.t1
chr5.4 CDS 15308995 15309105 15308995 ID=cds.MS.gene67557.t1;Parent=MS.gene67557.t1
chr5.4 exon 15309772 15309830 15309772 ID=MS.gene67557.t1.exon5;Parent=MS.gene67557.t1
chr5.4 CDS 15309772 15309830 15309772 ID=cds.MS.gene67557.t1;Parent=MS.gene67557.t1
chr5.4 exon 15310867 15310895 15310867 ID=MS.gene67557.t1.exon6;Parent=MS.gene67557.t1
chr5.4 CDS 15310867 15310895 15310867 ID=cds.MS.gene67557.t1;Parent=MS.gene67557.t1
chr5.4 exon 15312086 15312175 15312086 ID=MS.gene67557.t1.exon7;Parent=MS.gene67557.t1
chr5.4 CDS 15312086 15312175 15312086 ID=cds.MS.gene67557.t1;Parent=MS.gene67557.t1
chr5.4 exon 15312268 15312416 15312268 ID=MS.gene67557.t1.exon8;Parent=MS.gene67557.t1
chr5.4 CDS 15312268 15312416 15312268 ID=cds.MS.gene67557.t1;Parent=MS.gene67557.t1
Gene Sequence

>MS.gene67557

ATGGGAGGTGACGCAACCGCTGAAACCACCACGGAGCCACAATCCACCGACGGAGGAGTTAAGATCAACATTCGTTGTTCCAATGGTTCCAAATTTTCCGTTCAGATTAGCCTCGATTCCACCGTTGTTTCCTTCAAGGATGTTATTGCTCAGAACTGCGATATCTCTGCTGATCAACAACGCTTGATTTATAAGGGAAGGATTCTTAAGGATGATCAAACGCTTCAAAGCTATGGTATGAACCCGATCTTCCAATTATTTATATATTTGTTCGTGTTTTTCGATTCTGAGTTTTGTTCGTGATGCTTAATTTTATGTAATAATTGAAAATTAAAGATATCTTTGTGTAATTTTTTGATTGTATTGCTTTTGATTTTATCATTTTTCGTGCTTTTTGGTTTATTATACTCCCTCCGGTCCTATTTACAAGAAACAATTGACTAAACCAAATACATAAATTATTCAATGTATCTAAAAAGTCAAATGTTTCTCGTAAAAAGGACCGGAGGGAGTATTAATTTATCTCACTTATTTGAGAATGTACGATAACCTATCTAGCACCTACATCGAAGGTGTCATTTTTGACATCGACACATATGACTACATGAATTATGTTATTTTCTCAAATTATTATTGGTGTCACCATGCGGGTGACACGTTTCAGGTGTCCGTGTCTATGTTTTTATTATATAGTCTATAACTCCAGTATTTGCATTTGTATGGGTTAACAATAACATAGGATGAATTTGTCGACAATCAATGGAACGTGGAATTAGCTTTAAACACTATTTTATTTGGATATAAAGGGTGTTGTATTGTATTTTTTAGAGTGAAAATACGACGATTAAAATCATTGTTTATTTTATGCTGTCAGGAATTGATTTGTTCATATGGAAATTCTTTGGTGTTTCAGAGGGGTTAGGATCGTCTCCATTTAGGAGCATATCCATTTCTTCTATTTAGAAAGAGAGACACAAGTTTGAAGAAAATTATAAAATAATAATTAATAGTGGTGGGACCCACTATATCTCTAAATGGTATCCTCCATTTATTTTGATAAATGGAGAGGATCCTAACTTGTTTCCGAGAGTATTTAGCGAATGTGTGAATATAATTTTCTTTTGTATTTGGATTTATTTATAGGTTTGGAGGCAGATCACACTGTCCATTTGGTTCGTGGCTTTACGCCTGCCAATACAACTGGTGGGGCTAATACCACTGGTGCCAATACGACCACTACTAATGCTAGAGCTGCTGGTGCTAATGAGGGTGGGGGATTAGGAGGACCTGGACTTGGAGCTTCACTGTTTCCAGGGCTAGGAGGTATCAATGGGATGGGAGGAGGTGGTGGTCTCAATAGTTTATTTGGAGCAGGGCCTCCAGATCTTGAACAATTGCAGCAACCATTTATGTCAAATCCCAATTTAGTGAGAGAAATAATGAACTCACCTGCCATGCAAAATCTATTAAATAATCCCGAGATAGTGCGCAACCTTCTAATGAGTAACCCACAGATGCAAGAGCTTATGGATAGAAACCCTGAGCTGGCACACATACTCAATGATCCTAGCACACTTCGCCAGACACTTGAGGCTACAAGAAACCCTGAGATCATGCGTGAAATGATGAGGAATACAGACAGAGCTATGAGCAACATTGAATCTTCTCCTGAGGGGTTTAACATGCTGAGGCGCATGTATGAAAATGTTCAAGAACCATTTTTAAATGCCACCACAATGGCAGGAAATGACAGTTCCAGAATTTTGGGGACTCAAGGTGGCCAAACGAGGAATCCATCGACCAATCCCTCAACTACTAATGCTGAAGCAACTTCCCCTGTACCCAATACTAACCCACTTCCTAATCCTTGGTCATCTGCTCCAAGTAAGTATGATTTTTTTCATCATGATCAACTGATCAAGGAACTTAATGCCCCGCGGTTTATCACAATTTTCAAGTTTTTTTGATGTTTCAATTTATTTGTTATGTTCTAAAGCCTTACAAACCAAATGCTTGTTATTTTAGCTGGAGGTGCCCACACTAATGTCAGGAGATCAACACCTACTGCTGCAGATGCTTGGCAGCAGACACCCACTGGCTTAGGCGGGCTTGGTATGCCAGATCTCGAAGGCATGTTGGGTGGTATGCCAGATGCTGGTTCATTGACCCAATTAATGCAAAATCCAGCTATTTCTCAAATGATGCAAAGTATCATGTCCAATCCTCAAACAATGAATCAGGTATTTACTTAATGTGCGTATAAGTTATGTTATGCATGCTATTGAACAGATATCTCTAACGTCTTGGTTTATTTTAGATTCTTGGTATGAATACTGATCAGCGTGGGATGCCTGATATGAATTCAATGAGAGAAGTGATGCAAAACCCGGAGTTTCTTCGAATGTTTTCCTCACCCGAGACAATGCAGGTAGGCAGATTTAGAATGCTCTCGTCTGTTGATGAATTTTAGCTAATAGGCTCTCCCAATCAGTGTTGAGTACATAACAATTAACCTATTAATAAGTTTGTGGTGCAACACTGAAGCATTTAATCGTACACTCATTTTAGGAGAAAATTAATTTTTAATGTTTCTATAGATATTTTCACTTTTGTTTCTCCGGCACTGTGATAAATTGTATGAGTAATAAGGTTTTCACTGTTCAGCATTAAAAAATAGTGACTAATGACTGTAAGAGTCGGACCTAGATCTAGTGGTTGGATAGTGGCCTCCTAGCCGAGCCTTTGAAAATTAATCGACTGTGACAATTTGTGATTAAATTTTGATGAGCTTTTTGTGTTAGAAAATATGATTTTACTAATTAATGTGATCCATTGTTGTCTAATAGCAGCTATAGGATAGCAAATTATTGAATAACGGCTACCGTTCCACGATACACGATTCAGTACAAAGTGTTGTCAGATAGTTGCTATTGTATTGCTATAGCACTGTAGCTTAGCAGAATTTGAACGAAATTCTATTTTCCCGCAATCTGGGATTGACAACACCGATTTACTCTATTATGATAAAGAGTTATTGTTGTTTTGTACCTAGATATACTAAATAAATTAACTCGTGTCCTATCAACTATGGCAGCAACTCTTGTCTATGCAGCAAGCTCTTATGACTCAACTTGGACAGCAGCAATCAACACAGTAAGTAACGGAGCAGTCCTAACATTCAATCATTAATTTTTGCTAGCTTGATTGATACTTGTACTTTGATGTTCAATTGTATTGATCATATATCTTAATCATATGCTATGAAACATGGATGTGCCAAAATGGTAGGTGCTCATGTACCTTGTATCTACTGTATGCTTGGTTGGGTTTGTACAATTGTTAAAAAGAAAATAATAAAGGGGATCTCGGGATTGGATACGGCGTGATGTTTGTTGGGCATGGCTTGAGAAAAAAAATGTAGGCATTTTGGGTCCACAGATGAGAGAGTGTGAGAAGAGCTAATCCTTACCATTTGATCTCTCATGGGCGCTCTATATTTATTTAGAGCAAAACCGTTATTGATTCTTGGTCATCTATGTATATATATGGTCTAGATCCAACCAAACTCAGTTTTTTTGCTCTATTGACTCCCTCGCACATCTCTTAGGACTTGATAAAATATGAATGCCCGTGTGTAGTTGGATGAGCTTTCTTGCCTCCTCTTTTTTTGGTTATAGCTTTTTTTTGGAAATATTTGTTGTTGTAGCTTGTTTCCTTTTGCTGATCATGATTGTCAGACGCTAAAACAATTTTTTGGTTTTTGTGCAATAAAATCCTTGAAAGTGTGTGTTTTATTATCTGTCTAAGTAAAGATGTACAATTTGGGTCTGAGTCTACATTTATTATCACACTATAAGCACCTACTTAAATGTGCAAACACAGCCTAGATGGGTATGGCTCACCATAATGGCCTTTTTCTGATGACATTTGACATTTGCATGAGTTGTATTTGAACCTAGGGTTCCTTCATTCAAATCCTGCTATAAATCCTTTTTGAGTATGTGATTTGCATTGGGGTAATCCTTCTGTCATCCTAAACTTTTCTTAACCTGCCCCCAAAACAACTTCAGTGGAAATTTGCCTTGTGACTAAATAAGTAGTGAAGTTTGAATTTTGATGCTCTTTTTGATTTTATTTTGTTTACTATTTGCTACTGGCTGGGTCATCTAAAATGATGCGCTTTGTGCAGGGAACCAGGTCAAACAGGTGGAGGCACTGGTATGCAAGACAATTTTGCATTCATTTATGGTTTCTGTATATAGAACTATGCTCTGTTAGTCTGTTTGGAATATTTCAGCACTTCACTTCAAATTCCTTGACCATCTCTTAAGATCACCAATCTAAATTTGAATTATTGTGAATTATAACGTTTTGGATCAATGGAACATTTAATAATGTGTTTGTGTATCCTCTTCTACATGCTCTCTGCATCTTTACGTTGAAAATTTGTCTACTATGAGGTTTTCCCTAAGATCTTAGCTAAGTCTTTTATTAGGTGGATGATAAATCATATAGGTTGATCTGGGTGTTTAAGTTATGTGGCCCTTGAGGTAGGGCAGTGCCTTAAACCGTTTCTAACCAAATTTAAGCTGTGCCTAACTGAATCCTTCGTATCCATTTATACATGTGAAACCATTTACATGGCCAACCAAAGGGCATGGGCAATAAAGCCGAAGCTTTAGGCCAATAAAGTCAAAGCTTTAGGCCTCCTCTTATGCAAGGCTTCAATTTTTATTTCATGTTAGTATGTTATACATGTAGAGGCTGCCCAGGTTTATAAGTGGGTTTTTTCTTCTTCATAAAAAAGACCCTTCATCTCCTCTTCTACTAAGGCCTCAATTATATTTGAATGATGTATTTATAAGGTGGTCCAAGTAACCCTTCATCTCCTCCTTCATATGACTTGATCTACTGAAAATATGCCTGCCATCTTTTTTTAGGGTTTACTTTCATGAGGTGTGGGTGCCATCTCTATTTCTTTTTGCCTGACTGGTCCCATCCCTCTATTTCTTTTTGCCCTTGCCTCTCATTCGCCATTTCAGATATGCCTGACTGGTCCCATCCCTCTATTTCTTTTTGCCCTTGCCTCTCATTCGCCATTTCAGATATTCCTGTTGGCGGTGCCATTATAATGGCAACCGCCATACCCCGCCATGAATACCACATATACAGTAGCTTACCTAATACCCAAATACTGTGCTGCATGTTGCCACCAATACTGTTTTTTTTTTTTTTAACACTGATATTGAGTCAGCCTTGCTTTTGAAGGTCCCATGCATCTATAGAATAGCAATGACGGGGGAGGTTTTTAAGGGGGCAGCTGGATGATGCAATTGCCATTGGTTGCACATTAAAAAATTATAATAATTTTTTTTTTTGTAATTGCTTAAATTTGTTTCTGTTAGTAGGACCAGTGAACAACTTGGGGTTGGAGATGTTATCGAGCATGTTTGGTGGACTTGGAGCTGGTAGCCTAGCTGTTCCAAACAGATCAAATGGTTAGTTAGGATTGCTATTGTTTTTGTAATTTTCTACCTGCATTACTATTCTAAATAATTTTTATACCGATCTCTCCTCGATGTCTTCCCAGAGCCTCCAGAGACATTGTATGCTACCCAGCTTACCCAGCTTCAAGAGATGGGATTCTTTGACACGCAAGAGAACTTAAGGGCTCTTATTGCTACATCAGGGAATGTTCATGCAGCGGTTGAGCGACTTTTGGGAAACTCTGGACAGTAG

Protein sequence

>MS.gene67557.t1

MGGDATAETTTEPQSTDGGVKINIRCSNGSKFSVQISLDSTVVSFKDVIAQNCDISADQQRLIYKGRILKDDQTLQSYGLEADHTVHLVRGFTPANTTGGANTTGANTTTTNARAAGANEGGGLGGPGLGASLFPGLGGINGMGGGGGLNSLFGAGPPDLEQLQQPFMSNPNLVREIMNSPAMQNLLNNPEIVRNLLMSNPQMQELMDRNPELAHILNDPSTLRQTLEATRNPEIMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMAGNDSSRILGTQGGQTRNPSTNPSTTNAEATSPVPNTNPLPNPWSSAPTGGAHTNVRRSTPTAADAWQQTPTGLGGLGMPDLEGMLGGMPDAGSLTQLMQNPAISQMMQSIMSNPQTMNQILGMNTDQRGMPDMNSMREVMQNPEFLRMFSSPETMQQLLSMQQALMTQLGQQQSTQEPGQTGGGTGPVNNLGLEMLSSMFGGLGAGSLAVPNRSNEPPETLYATQLTQLQEMGFFDTQENLRALIATSGNVHAAVERLLGNSGQ