Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69268.t1 | XP_003600838.1 | 97 | 436 | 13 | 0 | 1 | 436 | 1 | 436 | 1.80E-236 | 828.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69268.t1 | P92961 | 71.2 | 431 | 122 | 1 | 6 | 436 | 14 | 442 | 6.0e-180 | 631.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69268.t1 | G7JAM5 | 97.0 | 436 | 13 | 0 | 1 | 436 | 1 | 436 | 1.3e-236 | 828.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049378 | MS.gene69268 | 0.845838 | 3.16E-59 | -1.69E-46 |
MS.gene04991 | MS.gene69268 | -0.804977 | 1.67E-49 | -1.69E-46 |
MS.gene050623 | MS.gene69268 | -0.820581 | 6.36E-53 | -1.69E-46 |
MS.gene050762 | MS.gene69268 | 0.806095 | 9.71E-50 | -1.69E-46 |
MS.gene050763 | MS.gene69268 | 0.809787 | 1.59E-50 | -1.69E-46 |
MS.gene052077 | MS.gene69268 | 0.817924 | 2.56E-52 | -1.69E-46 |
MS.gene052389 | MS.gene69268 | 0.814729 | 1.33E-51 | -1.69E-46 |
MS.gene052420 | MS.gene69268 | 0.815971 | 7.03E-52 | -1.69E-46 |
MS.gene054379 | MS.gene69268 | 0.821585 | 3.73E-53 | -1.69E-46 |
MS.gene054930 | MS.gene69268 | 0.816074 | 6.67E-52 | -1.69E-46 |
MS.gene055505 | MS.gene69268 | 0.821215 | 4.55E-53 | -1.69E-46 |
MS.gene055701 | MS.gene69268 | 0.849172 | 3.83E-60 | -1.69E-46 |
MS.gene05761 | MS.gene69268 | 0.807395 | 5.16E-50 | -1.69E-46 |
MS.gene059609 | MS.gene69268 | 0.811386 | 7.18E-51 | -1.69E-46 |
MS.gene060802 | MS.gene69268 | 0.811885 | 5.60E-51 | -1.69E-46 |
MS.gene060940 | MS.gene69268 | 0.81168 | 6.20E-51 | -1.69E-46 |
MS.gene060942 | MS.gene69268 | 0.802288 | 6.02E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69268.t1 | MTR_3g069960 | 97.018 | 436 | 13 | 0 | 1 | 436 | 1 | 436 | 0.0 | 859 |
MS.gene69268.t1 | MTR_3g069960 | 97.389 | 383 | 10 | 0 | 54 | 436 | 1 | 383 | 0.0 | 755 |
MS.gene69268.t1 | MTR_5g081630 | 77.546 | 383 | 86 | 0 | 54 | 436 | 1 | 383 | 0.0 | 626 |
MS.gene69268.t1 | MTR_3g069960 | 96.825 | 315 | 10 | 0 | 1 | 315 | 1 | 315 | 0.0 | 587 |
MS.gene69268.t1 | MTR_4g104510 | 40.503 | 437 | 256 | 4 | 1 | 436 | 17 | 450 | 6.41e-113 | 339 |
MS.gene69268.t1 | MTR_4g104510 | 40.503 | 437 | 254 | 5 | 1 | 436 | 17 | 448 | 4.92e-112 | 337 |
MS.gene69268.t1 | MTR_1g070470 | 32.658 | 395 | 249 | 7 | 54 | 436 | 51 | 440 | 1.17e-51 | 180 |
MS.gene69268.t1 | MTR_1g492640 | 30.184 | 434 | 268 | 11 | 25 | 435 | 59 | 480 | 2.97e-45 | 164 |
MS.gene69268.t1 | MTR_8g099320 | 27.918 | 437 | 269 | 12 | 26 | 433 | 28 | 447 | 6.74e-44 | 159 |
MS.gene69268.t1 | MTR_4g055610 | 29.909 | 438 | 264 | 13 | 26 | 436 | 41 | 462 | 1.68e-41 | 153 |
MS.gene69268.t1 | MTR_1g492640 | 29.577 | 355 | 227 | 9 | 95 | 435 | 3 | 348 | 5.75e-32 | 125 |
MS.gene69268.t1 | MTR_1g492640 | 30.201 | 298 | 184 | 7 | 25 | 305 | 41 | 331 | 2.15e-29 | 118 |
MS.gene69268.t1 | MTR_1g492640 | 30.201 | 298 | 184 | 7 | 25 | 305 | 59 | 349 | 2.80e-29 | 118 |
MS.gene69268.t1 | MTR_6g022790 | 25.435 | 460 | 299 | 14 | 5 | 434 | 10 | 455 | 1.53e-25 | 108 |
MS.gene69268.t1 | MTR_2g101920 | 26.222 | 450 | 276 | 15 | 20 | 433 | 31 | 460 | 7.72e-25 | 106 |
MS.gene69268.t1 | MTR_5g054730 | 28.535 | 396 | 256 | 11 | 54 | 433 | 54 | 438 | 2.42e-24 | 105 |
MS.gene69268.t1 | MTR_6g023065 | 28.463 | 397 | 257 | 11 | 54 | 434 | 78 | 463 | 4.31e-24 | 104 |
MS.gene69268.t1 | MTR_4g103890 | 26.290 | 407 | 280 | 10 | 38 | 432 | 23 | 421 | 1.52e-23 | 102 |
MS.gene69268.t1 | MTR_1g093020 | 27.157 | 394 | 264 | 8 | 54 | 433 | 52 | 436 | 1.94e-23 | 102 |
MS.gene69268.t1 | MTR_1g105980 | 27.311 | 476 | 278 | 20 | 7 | 433 | 11 | 467 | 1.20e-22 | 100 |
MS.gene69268.t1 | MTR_8g080120 | 25.441 | 397 | 269 | 12 | 54 | 434 | 51 | 436 | 1.58e-22 | 99.8 |
MS.gene69268.t1 | MTR_2g096830 | 27.179 | 390 | 272 | 8 | 54 | 434 | 42 | 428 | 4.93e-22 | 98.2 |
MS.gene69268.t1 | MTR_1g105990 | 27.505 | 469 | 280 | 18 | 14 | 432 | 10 | 468 | 7.05e-22 | 98.2 |
MS.gene69268.t1 | MTR_1g093030 | 27.778 | 396 | 259 | 12 | 54 | 433 | 52 | 436 | 1.06e-21 | 97.4 |
MS.gene69268.t1 | MTR_3g096800 | 25.591 | 465 | 299 | 15 | 7 | 435 | 22 | 475 | 2.02e-21 | 96.7 |
MS.gene69268.t1 | MTR_6g022780 | 28.133 | 391 | 267 | 10 | 54 | 434 | 42 | 428 | 2.11e-21 | 96.3 |
MS.gene69268.t1 | MTR_8g094290 | 26.134 | 463 | 286 | 17 | 12 | 433 | 24 | 471 | 2.38e-21 | 96.7 |
MS.gene69268.t1 | MTR_3g005740 | 24.688 | 401 | 265 | 12 | 57 | 434 | 83 | 469 | 9.85e-21 | 94.7 |
MS.gene69268.t1 | MTR_3g110660 | 24.947 | 469 | 303 | 17 | 8 | 433 | 16 | 478 | 2.28e-20 | 93.6 |
MS.gene69268.t1 | MTR_3g085820 | 27.027 | 370 | 233 | 14 | 12 | 355 | 9 | 367 | 3.27e-20 | 92.4 |
MS.gene69268.t1 | MTR_3g096830 | 27.033 | 418 | 257 | 16 | 9 | 390 | 16 | 421 | 7.18e-20 | 92.0 |
MS.gene69268.t1 | MTR_6g023075 | 27.621 | 391 | 269 | 10 | 54 | 434 | 42 | 428 | 8.47e-20 | 91.7 |
MS.gene69268.t1 | MTR_1g029750 | 27.251 | 422 | 257 | 15 | 9 | 390 | 25 | 436 | 1.37e-19 | 91.3 |
MS.gene69268.t1 | MTR_4g073520 | 26.096 | 479 | 287 | 20 | 7 | 433 | 45 | 508 | 1.61e-19 | 91.3 |
MS.gene69268.t1 | MTR_4g073520 | 25.887 | 479 | 288 | 19 | 7 | 433 | 45 | 508 | 1.84e-19 | 90.9 |
MS.gene69268.t1 | MTR_7g038910 | 27.792 | 403 | 252 | 12 | 54 | 434 | 58 | 443 | 2.67e-19 | 90.1 |
MS.gene69268.t1 | MTR_3g088475 | 26.914 | 431 | 248 | 19 | 57 | 436 | 65 | 479 | 2.72e-19 | 90.5 |
MS.gene69268.t1 | MTR_3g096840 | 25.786 | 477 | 292 | 17 | 2 | 434 | 22 | 480 | 3.04e-19 | 90.1 |
MS.gene69268.t1 | MTR_3g088455 | 26.652 | 469 | 289 | 16 | 9 | 436 | 24 | 478 | 4.39e-19 | 89.7 |
MS.gene69268.t1 | MTR_1g007380 | 25.902 | 471 | 296 | 20 | 8 | 433 | 6 | 468 | 6.09e-19 | 89.4 |
MS.gene69268.t1 | MTR_1g106000 | 26.068 | 468 | 274 | 19 | 27 | 435 | 17 | 471 | 9.11e-19 | 88.6 |
MS.gene69268.t1 | MTR_7g038910 | 29.102 | 323 | 190 | 12 | 54 | 354 | 58 | 363 | 1.94e-18 | 87.0 |
MS.gene69268.t1 | MTR_1g093020 | 26.257 | 358 | 241 | 8 | 54 | 397 | 52 | 400 | 4.12e-18 | 86.3 |
MS.gene69268.t1 | MTR_1g105995 | 26.115 | 471 | 289 | 18 | 10 | 433 | 8 | 466 | 2.54e-17 | 84.3 |
MS.gene69268.t1 | MTR_2g096830 | 26.645 | 304 | 211 | 8 | 54 | 348 | 42 | 342 | 3.12e-17 | 82.8 |
MS.gene69268.t1 | MTR_7g038910 | 27.445 | 317 | 197 | 11 | 54 | 354 | 58 | 357 | 6.03e-17 | 82.4 |
MS.gene69268.t1 | MTR_4g055637 | 30.952 | 210 | 119 | 6 | 240 | 436 | 182 | 378 | 1.67e-16 | 81.3 |
MS.gene69268.t1 | MTR_3g115090 | 25.833 | 360 | 242 | 12 | 57 | 395 | 115 | 470 | 7.36e-16 | 80.1 |
MS.gene69268.t1 | MTR_1g007240 | 23.333 | 420 | 278 | 13 | 54 | 434 | 40 | 454 | 1.85e-15 | 78.6 |
MS.gene69268.t1 | MTR_4g075750 | 25.062 | 403 | 254 | 16 | 57 | 424 | 101 | 490 | 2.08e-15 | 78.6 |
MS.gene69268.t1 | MTR_0531s0020 | 28.070 | 285 | 186 | 11 | 54 | 325 | 77 | 355 | 3.73e-15 | 77.0 |
MS.gene69268.t1 | MTR_2g031750 | 24.048 | 420 | 269 | 14 | 57 | 434 | 43 | 454 | 5.66e-15 | 77.0 |
MS.gene69268.t1 | MTR_5g023240 | 25.397 | 378 | 252 | 13 | 37 | 392 | 99 | 468 | 9.18e-14 | 73.6 |
MS.gene69268.t1 | MTR_5g096840 | 24.000 | 425 | 271 | 16 | 37 | 420 | 41 | 454 | 1.54e-13 | 72.8 |
MS.gene69268.t1 | MTR_3g061390 | 23.592 | 373 | 241 | 15 | 57 | 390 | 54 | 421 | 6.72e-13 | 70.5 |
MS.gene69268.t1 | MTR_1g007270 | 23.932 | 468 | 310 | 18 | 3 | 433 | 11 | 469 | 1.62e-12 | 69.3 |
MS.gene69268.t1 | MTR_1g492640 | 31.148 | 183 | 110 | 5 | 25 | 198 | 59 | 234 | 2.04e-12 | 67.8 |
MS.gene69268.t1 | MTR_1g492640 | 31.148 | 183 | 110 | 5 | 25 | 198 | 41 | 216 | 2.27e-12 | 67.4 |
MS.gene69268.t1 | MTR_3g461430 | 25.654 | 382 | 222 | 18 | 57 | 390 | 61 | 428 | 2.54e-12 | 68.9 |
MS.gene69268.t1 | MTR_3g461470 | 25.132 | 378 | 229 | 17 | 57 | 390 | 54 | 421 | 3.14e-12 | 68.6 |
MS.gene69268.t1 | MTR_3g088465 | 26.280 | 293 | 184 | 11 | 57 | 323 | 65 | 351 | 5.95e-12 | 67.4 |
MS.gene69268.t1 | MTR_3g461480 | 23.575 | 386 | 255 | 13 | 37 | 385 | 39 | 421 | 2.55e-11 | 65.9 |
MS.gene69268.t1 | MTR_3g110420 | 23.709 | 426 | 263 | 15 | 57 | 433 | 55 | 467 | 4.68e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69268.t1 | AT2G39890 | 71.230 | 431 | 122 | 1 | 6 | 436 | 14 | 442 | 0.0 | 654 |
MS.gene69268.t1 | AT2G39890 | 71.230 | 431 | 122 | 1 | 6 | 436 | 14 | 442 | 0.0 | 654 |
MS.gene69268.t1 | AT3G55740 | 71.496 | 421 | 120 | 0 | 16 | 436 | 19 | 439 | 0.0 | 644 |
MS.gene69268.t1 | AT2G36590 | 68.750 | 432 | 131 | 1 | 9 | 436 | 5 | 436 | 0.0 | 624 |
MS.gene69268.t1 | AT2G39890 | 71.018 | 383 | 111 | 0 | 54 | 436 | 1 | 383 | 0.0 | 583 |
MS.gene69268.t1 | AT3G55740 | 70.496 | 383 | 113 | 0 | 54 | 436 | 1 | 383 | 0.0 | 575 |
MS.gene69268.t1 | AT3G55740 | 70.496 | 383 | 113 | 0 | 54 | 436 | 1 | 383 | 0.0 | 575 |
MS.gene69268.t1 | AT2G36590 | 68.254 | 315 | 96 | 1 | 9 | 319 | 5 | 319 | 4.52e-164 | 465 |
MS.gene69268.t1 | AT1G08230 | 30.022 | 463 | 282 | 13 | 2 | 436 | 3 | 451 | 4.86e-45 | 162 |
MS.gene69268.t1 | AT5G41800 | 27.356 | 435 | 278 | 11 | 26 | 435 | 27 | 448 | 7.01e-37 | 140 |
MS.gene69268.t1 | AT1G08230 | 31.707 | 328 | 198 | 8 | 127 | 436 | 13 | 332 | 9.94e-34 | 129 |
MS.gene69268.t1 | AT1G08230 | 31.707 | 328 | 198 | 8 | 127 | 436 | 13 | 332 | 9.94e-34 | 129 |
MS.gene69268.t1 | AT1G08230 | 31.707 | 328 | 198 | 8 | 127 | 436 | 13 | 332 | 9.94e-34 | 129 |
MS.gene69268.t1 | AT1G08230 | 31.707 | 328 | 198 | 8 | 127 | 436 | 32 | 351 | 1.17e-33 | 129 |
MS.gene69268.t1 | AT1G24400 | 27.387 | 398 | 260 | 12 | 54 | 434 | 56 | 441 | 1.05e-25 | 108 |
MS.gene69268.t1 | AT5G40780 | 25.495 | 455 | 297 | 12 | 8 | 434 | 6 | 446 | 2.96e-25 | 107 |
MS.gene69268.t1 | AT5G40780 | 26.633 | 398 | 263 | 9 | 54 | 434 | 13 | 398 | 4.51e-25 | 106 |
MS.gene69268.t1 | AT5G40780 | 26.633 | 398 | 263 | 9 | 54 | 434 | 13 | 398 | 4.51e-25 | 106 |
MS.gene69268.t1 | AT1G67640 | 25.641 | 390 | 277 | 9 | 54 | 434 | 56 | 441 | 4.72e-23 | 101 |
MS.gene69268.t1 | AT1G48640 | 25.647 | 464 | 300 | 15 | 1 | 434 | 5 | 453 | 8.22e-22 | 97.8 |
MS.gene69268.t1 | AT5G09220 | 26.492 | 419 | 261 | 13 | 57 | 433 | 76 | 489 | 1.32e-21 | 97.4 |
MS.gene69268.t1 | AT5G63850 | 24.841 | 471 | 289 | 18 | 7 | 433 | 13 | 462 | 8.21e-21 | 94.7 |
MS.gene69268.t1 | AT1G25530 | 28.463 | 397 | 257 | 11 | 54 | 434 | 55 | 440 | 8.90e-20 | 91.7 |
MS.gene69268.t1 | AT1G71680 | 25.885 | 452 | 303 | 13 | 2 | 434 | 10 | 448 | 1.88e-19 | 90.5 |
MS.gene69268.t1 | AT1G44100 | 27.197 | 478 | 276 | 23 | 9 | 433 | 18 | 476 | 3.24e-19 | 90.1 |
MS.gene69268.t1 | AT3G01760 | 24.944 | 445 | 297 | 12 | 6 | 423 | 3 | 437 | 9.94e-18 | 85.5 |
MS.gene69268.t1 | AT1G77380 | 26.329 | 395 | 241 | 17 | 57 | 410 | 60 | 445 | 1.97e-17 | 84.7 |
MS.gene69268.t1 | AT1G58360 | 24.211 | 475 | 302 | 15 | 6 | 433 | 17 | 480 | 2.09e-17 | 84.7 |
MS.gene69268.t1 | AT1G61270 | 25.747 | 435 | 289 | 13 | 7 | 420 | 13 | 434 | 3.22e-17 | 84.0 |
MS.gene69268.t1 | AT1G10010 | 26.042 | 480 | 290 | 20 | 4 | 436 | 14 | 475 | 1.17e-15 | 79.3 |
MS.gene69268.t1 | AT1G10010 | 26.042 | 480 | 290 | 20 | 4 | 436 | 13 | 474 | 1.29e-15 | 79.3 |
MS.gene69268.t1 | AT1G71680 | 26.269 | 335 | 229 | 11 | 2 | 323 | 10 | 339 | 5.46e-15 | 76.6 |
MS.gene69268.t1 | AT5G49630 | 24.711 | 433 | 262 | 15 | 6 | 390 | 19 | 435 | 2.80e-14 | 75.1 |
Find 106 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTAATTTGATGAGCAGTTTC+TGG | 0.188300 | 3.2:-63752594 | None:intergenic |
AAATACTGGTTACATCATTT+TGG | 0.194408 | 3.2:+63754316 | MS.gene69268:CDS |
TGGTTACCTTTGCAGGATAC+TGG | 0.253653 | 3.2:+63755402 | MS.gene69268:CDS |
ACTAAAATATTCACAACAAT+TGG | 0.270885 | 3.2:+63755150 | MS.gene69268:CDS |
ATCTTTCAGCTCTTGGAGTT+TGG | 0.276364 | 3.2:+63754751 | MS.gene69268:CDS |
AAGTCCGATGTATGAGTATT+TGG | 0.293374 | 3.2:+63755640 | MS.gene69268:CDS |
ATTCCTCATCTTTCAGCTCT+TGG | 0.319082 | 3.2:+63754744 | MS.gene69268:CDS |
TGGTTCCTCTTGGTTGGGTA+GGG | 0.321672 | 3.2:+63754018 | MS.gene69268:CDS |
ATTGCTATGCTCCATGAATA+TGG | 0.328776 | 3.2:+63754095 | MS.gene69268:CDS |
ATGTACATGGTTACCTTTGC+AGG | 0.331651 | 3.2:+63755395 | MS.gene69268:CDS |
TTTGCAGGATACTGGGCTTA+TGG | 0.333787 | 3.2:+63755410 | MS.gene69268:CDS |
TGGATACTCAGGGACCATTA+TGG | 0.339605 | 3.2:+63753998 | MS.gene69268:CDS |
CCATTATGGTTCCTCTTGGT+TGG | 0.339833 | 3.2:+63754012 | MS.gene69268:CDS |
TGCAAACCATATGTACTATA+AGG | 0.341374 | 3.2:+63755838 | MS.gene69268:CDS |
TCTTTGCCTTATAGTACATA+TGG | 0.348183 | 3.2:-63755844 | None:intergenic |
TTCATCATGTTCTTGACAAC+TGG | 0.353000 | 3.2:-63755335 | None:intergenic |
TCAGCTCTTGGAGTTTGGTT+GGG | 0.354431 | 3.2:+63754756 | MS.gene69268:CDS |
GATCTTGCTGGATATATATA+TGG | 0.362894 | 3.2:+63754143 | MS.gene69268:CDS |
TTCAGCTCTTGGAGTTTGGT+TGG | 0.369188 | 3.2:+63754755 | MS.gene69268:CDS |
TTGAAGGAAGGCTGTAATAT+TGG | 0.378244 | 3.2:-63755495 | None:intergenic |
GTGCACGCTATTCAGCAAAT+AGG | 0.379972 | 3.2:-63755447 | None:intergenic |
GTCTTGTCCCTCCATATTCA+TGG | 0.380371 | 3.2:-63754106 | None:intergenic |
CTAAAATATTCACAACAATT+GGG | 0.390597 | 3.2:+63755151 | MS.gene69268:CDS |
CCATCATCATGAATCTTGTT+AGG | 0.396564 | 3.2:-63752561 | None:intergenic |
TCCAGCTTGGGTGAAAGCTT+TGG | 0.397072 | 3.2:+63755472 | MS.gene69268:CDS |
CATTATGGTTCCTCTTGGTT+GGG | 0.403721 | 3.2:+63754013 | MS.gene69268:CDS |
ATGGTTCCTCTTGGTTGGGT+AGG | 0.416120 | 3.2:+63754017 | MS.gene69268:CDS |
GCCAAAGCTTTCACCCAAGC+TGG | 0.426229 | 3.2:-63755473 | None:intergenic |
GGTTCCTCTTGGTTGGGTAG+GGG | 0.426770 | 3.2:+63754019 | MS.gene69268:CDS |
TAATTTGATGAGCAGTTTCT+GGG | 0.429639 | 3.2:-63752593 | None:intergenic |
CGGCATGCTTCCTGAGATAC+AGG | 0.431193 | 3.2:+63755206 | MS.gene69268:CDS |
GTGGGATGTGTCCTCACTAC+TGG | 0.431656 | 3.2:+63753954 | MS.gene69268:CDS |
GCGGCTCTTCTGCCATTCCT+TGG | 0.436629 | 3.2:+63755761 | MS.gene69268:CDS |
GTTCCTCTTGGTTGGGTAGG+GGG | 0.437185 | 3.2:+63754020 | MS.gene69268:CDS |
GTCTATCTGACCTGTATCTC+AGG | 0.450002 | 3.2:-63755216 | None:intergenic |
CTGTGGTTTCAGTTTACCAT+TGG | 0.450914 | 3.2:+63755362 | MS.gene69268:CDS |
GTTTACAGAAGGGAGGGCTC+TGG | 0.450915 | 3.2:+63755882 | MS.gene69268:CDS |
GGGACCATTATGGTTCCTCT+TGG | 0.458907 | 3.2:+63754008 | MS.gene69268:CDS |
TAGCGTGCACGGTCCAGCTT+GGG | 0.462680 | 3.2:+63755460 | MS.gene69268:CDS |
GCTTATGTGCTTGGATACTC+AGG | 0.465982 | 3.2:+63753987 | MS.gene69268:CDS |
CCGTACTGCATTGCTATAGC+TGG | 0.473359 | 3.2:+63754693 | MS.gene69268:CDS |
AGCCGCTATGAATGTGTTGA+AGG | 0.475158 | 3.2:-63755744 | None:intergenic |
CGGAGTAAGAGGTGGTTACC+TGG | 0.486173 | 3.2:+63755721 | MS.gene69268:CDS |
TGTATACATTGTCATAGCAT+TGG | 0.487225 | 3.2:+63754800 | MS.gene69268:CDS |
ATTAGATACAGAGATCTTGC+TGG | 0.488924 | 3.2:+63754131 | MS.gene69268:CDS |
GGTTACCTTTGCAGGATACT+GGG | 0.495231 | 3.2:+63755403 | MS.gene69268:CDS |
GTCAACAGTGCTTATGTGCT+TGG | 0.495512 | 3.2:+63753978 | MS.gene69268:CDS |
GACAACTGGCTGCTTAATTG+TGG | 0.498032 | 3.2:-63755321 | None:intergenic |
GAGTATTTGGATACTAGATA+CGG | 0.506955 | 3.2:+63755653 | MS.gene69268:CDS |
ATAGCGTGCACGGTCCAGCT+TGG | 0.509613 | 3.2:+63755459 | MS.gene69268:CDS |
CTGCAACTGTTGCGGCAGTA+CGG | 0.519016 | 3.2:+63755939 | MS.gene69268:CDS |
CTATGAATGTGTTGAAGGCC+AGG | 0.524006 | 3.2:-63755739 | None:intergenic |
TTTACAGAAGGGAGGGCTCT+GGG | 0.526001 | 3.2:+63755883 | MS.gene69268:CDS |
TGGACTTGTACCAATGTACA+TGG | 0.531370 | 3.2:+63755382 | MS.gene69268:CDS |
TATACCGTGTTTCGAGATGA+TGG | 0.534072 | 3.2:+63754657 | MS.gene69268:CDS |
TGAAAGATGAGGAATGCAAA+TGG | 0.537838 | 3.2:-63754736 | None:intergenic |
CCAACCAAGAGGAACCATAA+TGG | 0.541448 | 3.2:-63754012 | None:intergenic |
GTAATGCAATGACTGATTGA+AGG | 0.542448 | 3.2:-63755511 | None:intergenic |
CTAGTGTTCGCATACAATAC+CGG | 0.545518 | 3.2:+63755186 | MS.gene69268:CDS |
CTCTCGAAATCTCCAAGGAA+TGG | 0.547393 | 3.2:-63755773 | None:intergenic |
GTCTATTGCTGCAACTGTTG+CGG | 0.554081 | 3.2:+63755931 | MS.gene69268:CDS |
GGAGATTTCGAGAGTCTCAC+AGG | 0.554644 | 3.2:+63755782 | MS.gene69268:CDS |
TGCAGATTCATGGTTTCAAG+TGG | 0.558255 | 3.2:+63753935 | MS.gene69268:intron |
TAAAATATTCACAACAATTG+GGG | 0.565223 | 3.2:+63755152 | MS.gene69268:CDS |
GTATCCAAATACTCATACAT+CGG | 0.565959 | 3.2:-63755644 | None:intergenic |
CCTAACAAGATTCATGATGA+TGG | 0.566611 | 3.2:+63752561 | MS.gene69268:CDS |
GATCAGTGGAGAAGCAATGA+AGG | 0.569332 | 3.2:+63755676 | MS.gene69268:CDS |
AAAAGGCATATTCTATCACA+TGG | 0.570698 | 3.2:+63754264 | MS.gene69268:CDS |
CAAACTATCAAGTTTACAGA+AGG | 0.571563 | 3.2:+63755871 | MS.gene69268:CDS |
ACAACAATGGGTAAAGGAAG+AGG | 0.581226 | 3.2:+63752534 | None:intergenic |
GGAACAGTGTAATCTCGAGC+AGG | 0.584265 | 3.2:-63755114 | None:intergenic |
CAATGGTAAACTGAAACCAC+AGG | 0.585074 | 3.2:-63755361 | None:intergenic |
ACGGTAACAACAATGGGTAA+AGG | 0.586107 | 3.2:+63752528 | None:intergenic |
CTGTATCTCAGGAAGCATGC+CGG | 0.587899 | 3.2:-63755205 | None:intergenic |
GAGGCTAAAGAAAACAATGT+TGG | 0.588227 | 3.2:-63755906 | None:intergenic |
TATCAAGTTTACAGAAGGGA+GGG | 0.588624 | 3.2:+63755876 | MS.gene69268:CDS |
TTGGTGCTGTCGATTAAAGA+TGG | 0.589660 | 3.2:+63754819 | MS.gene69268:CDS |
GCAGATTCATGGTTTCAAGT+GGG | 0.595461 | 3.2:+63753936 | MS.gene69268:intron |
AGTATTTGGATACTAGATAC+GGG | 0.598892 | 3.2:+63755654 | MS.gene69268:CDS |
GATACTAGATACGGGATCAG+TGG | 0.600042 | 3.2:+63755662 | MS.gene69268:CDS |
TGCTATGACAATGTATACAA+AGG | 0.606274 | 3.2:-63754796 | None:intergenic |
ACTGCTCATCAAATTAGCAC+CGG | 0.606729 | 3.2:+63752600 | MS.gene69268:CDS |
GATTACACTGTTCCAGAACA+CGG | 0.606932 | 3.2:+63755123 | MS.gene69268:CDS |
CACACCATCATCTCGAAACA+CGG | 0.612096 | 3.2:-63754661 | None:intergenic |
CTATCAAGTTTACAGAAGGG+AGG | 0.614014 | 3.2:+63755875 | MS.gene69268:CDS |
CTATGCTCCATGAATATGGA+GGG | 0.617895 | 3.2:+63754099 | MS.gene69268:CDS |
TATTTGCTGAATAGCGTGCA+CGG | 0.618514 | 3.2:+63755449 | MS.gene69268:CDS |
CCAGCTATAGCAATGCAGTA+CGG | 0.625491 | 3.2:-63754693 | None:intergenic |
GCTATGCTCCATGAATATGG+AGG | 0.628110 | 3.2:+63754098 | MS.gene69268:CDS |
ATTAGCATAGAGCGAAATCG+CGG | 0.629033 | 3.2:-63754066 | None:intergenic |
TTTAGAGTCGGAGTAAGAGG+TGG | 0.631563 | 3.2:+63755713 | MS.gene69268:CDS |
CACTGTTGACTCCAGTAGTG+AGG | 0.634084 | 3.2:-63753965 | None:intergenic |
GTACATTGGTACAAGTCCAA+TGG | 0.635192 | 3.2:-63755378 | None:intergenic |
ACTCCAAGAGCTGAAAGATG+AGG | 0.637059 | 3.2:-63754747 | None:intergenic |
TGAGACTCTCGAAATCTCCA+AGG | 0.640360 | 3.2:-63755778 | None:intergenic |
CTTATGTGCTTGGATACTCA+GGG | 0.644689 | 3.2:+63753988 | MS.gene69268:CDS |
TGCAATGACTGATTGAAGGA+AGG | 0.648266 | 3.2:-63755507 | None:intergenic |
TTTGCAAGAATAAATGTAAG+CGG | 0.648730 | 3.2:-63755821 | None:intergenic |
AAACTATCAAGTTTACAGAA+GGG | 0.650323 | 3.2:+63755872 | MS.gene69268:CDS |
ATAAGCCCAGTATCCTGCAA+AGG | 0.654594 | 3.2:-63755408 | None:intergenic |
GCAAAGGTAACCATGTACAT+TGG | 0.656882 | 3.2:-63755392 | None:intergenic |
CAGTTGCAGCAATAGACATG+AGG | 0.664952 | 3.2:-63755925 | None:intergenic |
AAAGGCATATTCTATCACAT+GGG | 0.680687 | 3.2:+63754265 | MS.gene69268:CDS |
GGCCTTCAACACATTCATAG+CGG | 0.729798 | 3.2:+63755742 | MS.gene69268:CDS |
AATGGTAAACTGAAACCACA+GGG | 0.745661 | 3.2:-63755360 | None:intergenic |
AGAACATGATGAAATCCCTG+TGG | 0.754118 | 3.2:+63755345 | MS.gene69268:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAAAAGAGTTTAA+TGG | + | chr3.2:63753156-63753175 | MS.gene69268:intron | 10.0% |
!! | TTATTTAAAAGGAAAAATTA+AGG | - | chr3.2:63752645-63752664 | None:intergenic | 10.0% |
!!! | AATAAAAATTTAGAATATAC+AGG | + | chr3.2:63753660-63753679 | MS.gene69268:intron | 10.0% |
!!! | AATATACAATTTTAATTGAA+TGG | - | chr3.2:63754377-63754396 | None:intergenic | 10.0% |
!!! | CAACAAAATAATATTTTTTT+TGG | - | chr3.2:63753039-63753058 | None:intergenic | 10.0% |
!!! | GTTTTATATTTAATTTTGAA+AGG | + | chr3.2:63752685-63752704 | MS.gene69268:intron | 10.0% |
!!! | TAATTAACTAATTTTTTTTC+TGG | + | chr3.2:63753867-63753886 | MS.gene69268:intron | 10.0% |
!!! | TTTTCATTTTTTTTAATTGT+AGG | + | chr3.2:63754239-63754258 | MS.gene69268:intron | 10.0% |
!! | ATCTATCAAAACATTTAAAA+TGG | + | chr3.2:63753205-63753224 | MS.gene69268:intron | 15.0% |
!!! | ATTTTAAATGTTTTGATAGA+TGG | - | chr3.2:63753206-63753225 | None:intergenic | 15.0% |
!!! | TGTGTAAAATAATTTTTCAA+TGG | + | chr3.2:63753392-63753411 | MS.gene69268:intron | 15.0% |
!!! | TTACTGTTTTAATTTTAACT+GGG | + | chr3.2:63753898-63753917 | MS.gene69268:intron | 15.0% |
!!! | TTAGTCCATAATATTTTAAT+CGG | - | chr3.2:63754492-63754511 | None:intergenic | 15.0% |
!!! | TTGAGTATTATTTTTTGTAA+AGG | + | chr3.2:63754513-63754532 | MS.gene69268:intron | 15.0% |
!!! | TTTACTGTTTTAATTTTAAC+TGG | + | chr3.2:63753897-63753916 | MS.gene69268:intron | 15.0% |
!!! | TTTTTTAATTGTAGGTAAAA+AGG | + | chr3.2:63754247-63754266 | MS.gene69268:intron | 15.0% |
!! | AAAAGGAAAAATTAAGGTTA+TGG | - | chr3.2:63752639-63752658 | None:intergenic | 20.0% |
!! | ACTAAAATATTCACAACAAT+TGG | + | chr3.2:63755150-63755169 | MS.gene69268:CDS | 20.0% |
!! | CTAAAATATTCACAACAATT+GGG | + | chr3.2:63755151-63755170 | MS.gene69268:CDS | 20.0% |
!! | GGATATATATATGGTAAATA+AGG | + | chr3.2:63754152-63754171 | MS.gene69268:intron | 20.0% |
!! | GTTATTTAGTAAAGAAAGTT+TGG | - | chr3.2:63754446-63754465 | None:intergenic | 20.0% |
!! | TAAAATATTCACAACAATTG+GGG | + | chr3.2:63755152-63755171 | MS.gene69268:CDS | 20.0% |
!! | TATGTAAACAAAACAAACAT+AGG | - | chr3.2:63752931-63752950 | None:intergenic | 20.0% |
!! | TGAAACTTAATATGAAGATA+TGG | - | chr3.2:63755254-63755273 | None:intergenic | 20.0% |
!! | TTTGAAAGTAAGAGAAATTT+AGG | + | chr3.2:63754349-63754368 | MS.gene69268:intron | 20.0% |
!!! | AACTGAAGAAGTATATTAAA+GGG | - | chr3.2:63753848-63753867 | None:intergenic | 20.0% |
!!! | AATCTTTTCATGATAAATAC+TGG | + | chr3.2:63754302-63754321 | MS.gene69268:CDS | 20.0% |
!!! | ATTTTTTGTAAAGGACTAAA+AGG | + | chr3.2:63754522-63754541 | MS.gene69268:intron | 20.0% |
!!! | TAACTGAAGAAGTATATTAA+AGG | - | chr3.2:63753849-63753868 | None:intergenic | 20.0% |
!!! | TTTAGATAAGTGGATTATTA+TGG | - | chr3.2:63754930-63754949 | None:intergenic | 20.0% |
! | AAACATAGGTAAACTACAAA+AGG | - | chr3.2:63752917-63752936 | None:intergenic | 25.0% |
! | AAACTATCAAGTTTACAGAA+GGG | + | chr3.2:63755872-63755891 | MS.gene69268:CDS | 25.0% |
! | AACATAGGTAAACTACAAAA+GGG | - | chr3.2:63752916-63752935 | None:intergenic | 25.0% |
! | TAATGAGTAAAGACTCAATT+CGG | - | chr3.2:63754570-63754589 | None:intergenic | 25.0% |
! | TTTGAAAATTCCCATGTTTA+TGG | + | chr3.2:63752725-63752744 | MS.gene69268:intron | 25.0% |
! | TTTGCAAGAATAAATGTAAG+CGG | - | chr3.2:63755824-63755843 | None:intergenic | 25.0% |
!! | ACTGAAGAAGTATATTAAAG+GGG | - | chr3.2:63753847-63753866 | None:intergenic | 25.0% |
!! | AGATTTCTAATGTGTTTTGT+TGG | - | chr3.2:63754178-63754197 | None:intergenic | 25.0% |
!! | TATTTGTTAATGTAACTTGC+AGG | + | chr3.2:63755298-63755317 | MS.gene69268:intron | 25.0% |
!!! | AAATACTGGTTACATCATTT+TGG | + | chr3.2:63754316-63754335 | MS.gene69268:CDS | 25.0% |
!!! | AAGTTTGGATTAGTTTTTGT+CGG | - | chr3.2:63754431-63754450 | None:intergenic | 25.0% |
!!! | TTGTTTTTCTTTCCAAACAA+GGG | + | chr3.2:63752862-63752881 | MS.gene69268:intron | 25.0% |
!!! | TTTGTTTTTCTTTCCAAACA+AGG | + | chr3.2:63752861-63752880 | MS.gene69268:intron | 25.0% |
AGTATTTGGATACTAGATAC+GGG | + | chr3.2:63755654-63755673 | MS.gene69268:CDS | 30.0% | |
AGTTTACTCAGTTATACACT+AGG | + | chr3.2:63754949-63754968 | MS.gene69268:intron | 30.0% | |
ATAATAAGCTGTGATATGTG+TGG | + | chr3.2:63753558-63753577 | MS.gene69268:intron | 30.0% | |
CAAACTATCAAGTTTACAGA+AGG | + | chr3.2:63755871-63755890 | MS.gene69268:CDS | 30.0% | |
CACATATCACAGCTTATTAT+TGG | - | chr3.2:63753558-63753577 | None:intergenic | 30.0% | |
CTGAGTAAACTTTAGATAAG+TGG | - | chr3.2:63754940-63754959 | None:intergenic | 30.0% | |
GAAATAGAACACAGGTTATT+AGG | - | chr3.2:63755606-63755625 | None:intergenic | 30.0% | |
GAGTATTTGGATACTAGATA+CGG | + | chr3.2:63755653-63755672 | MS.gene69268:CDS | 30.0% | |
GATCTTGCTGGATATATATA+TGG | + | chr3.2:63754143-63754162 | MS.gene69268:CDS | 30.0% | |
GTATCCAAATACTCATACAT+CGG | - | chr3.2:63755647-63755666 | None:intergenic | 30.0% | |
GTCCTCCGATTAAAATATTA+TGG | + | chr3.2:63754484-63754503 | MS.gene69268:intron | 30.0% | |
GTGAATATGAATGTTACTCA+TGG | - | chr3.2:63753635-63753654 | None:intergenic | 30.0% | |
TAATTTGATGAGCAGTTTCT+GGG | - | chr3.2:63752596-63752615 | None:intergenic | 30.0% | |
TATTCACTCTTGAGAAGAAA+CGG | + | chr3.2:63753813-63753832 | MS.gene69268:intron | 30.0% | |
TCTTTGCCTTATAGTACATA+TGG | - | chr3.2:63755847-63755866 | None:intergenic | 30.0% | |
TGCAAACCATATGTACTATA+AGG | + | chr3.2:63755838-63755857 | MS.gene69268:CDS | 30.0% | |
TGCTATGACAATGTATACAA+AGG | - | chr3.2:63754799-63754818 | None:intergenic | 30.0% | |
TGTATACATTGTCATAGCAT+TGG | + | chr3.2:63754800-63754819 | MS.gene69268:CDS | 30.0% | |
TTACTCAATTTGTGTTTACC+TGG | + | chr3.2:63755580-63755599 | MS.gene69268:intron | 30.0% | |
! | AAAAGGCATATTCTATCACA+TGG | + | chr3.2:63754264-63754283 | MS.gene69268:CDS | 30.0% |
! | AAAGGCATATTCTATCACAT+GGG | + | chr3.2:63754265-63754284 | MS.gene69268:CDS | 30.0% |
! | CAATTGGTTTAAAGAACTGA+TGG | - | chr3.2:63754906-63754925 | None:intergenic | 30.0% |
! | CTGAAGAAGTATATTAAAGG+GGG | - | chr3.2:63753846-63753865 | None:intergenic | 30.0% |
! | TATATTGCAATTGACTCTCT+TGG | + | chr3.2:63753439-63753458 | MS.gene69268:intron | 30.0% |
!! | AGTGGATTATTATGGACAAT+TGG | - | chr3.2:63754922-63754941 | None:intergenic | 30.0% |
!! | CTTTTCTTTTTGAAGAGTGT+CGG | + | chr3.2:63753520-63753539 | MS.gene69268:intron | 30.0% |
!! | TGTACGTGTCGATTATTAAA+AGG | + | chr3.2:63753057-63753076 | MS.gene69268:intron | 30.0% |
!!! | AAGAACTTGTCTTTTAGAGT+CGG | + | chr3.2:63755701-63755720 | MS.gene69268:CDS | 30.0% |
!!! | AATTTGGTTTTGCAGATTCA+TGG | + | chr3.2:63753925-63753944 | MS.gene69268:intron | 30.0% |
!!! | AGTTTGGATTAGTTTTTGTC+GGG | - | chr3.2:63754430-63754449 | None:intergenic | 30.0% |
!!! | ATTTTAACTGGGTGGTAATT+TGG | + | chr3.2:63753909-63753928 | MS.gene69268:intron | 30.0% |
!!! | CTGTTTTAATTTTAACTGGG+TGG | + | chr3.2:63753901-63753920 | MS.gene69268:intron | 30.0% |
!!! | GTATTTTAATATTCGCAGAG+TGG | - | chr3.2:63753323-63753342 | None:intergenic | 30.0% |
!!! | GTCCATAATATTTTAATCGG+AGG | - | chr3.2:63754489-63754508 | None:intergenic | 30.0% |
AAGTCCGATGTATGAGTATT+TGG | + | chr3.2:63755640-63755659 | MS.gene69268:CDS | 35.0% | |
AATGGTAAACTGAAACCACA+GGG | - | chr3.2:63755363-63755382 | None:intergenic | 35.0% | |
AGAAAACTGATATTAGTGCC+AGG | - | chr3.2:63753784-63753803 | None:intergenic | 35.0% | |
ATCTGTCAGAAATAGAACAC+AGG | - | chr3.2:63755614-63755633 | None:intergenic | 35.0% | |
ATTAGATACAGAGATCTTGC+TGG | + | chr3.2:63754131-63754150 | MS.gene69268:CDS | 35.0% | |
ATTGCTATGCTCCATGAATA+TGG | + | chr3.2:63754095-63754114 | MS.gene69268:CDS | 35.0% | |
CCATCATCATGAATCTTGTT+AGG | - | chr3.2:63752564-63752583 | None:intergenic | 35.0% | |
CCTAACAAGATTCATGATGA+TGG | + | chr3.2:63752561-63752580 | MS.gene69268:CDS | 35.0% | |
CTAATTTGATGAGCAGTTTC+TGG | - | chr3.2:63752597-63752616 | None:intergenic | 35.0% | |
GAGGCTAAAGAAAACAATGT+TGG | - | chr3.2:63755909-63755928 | None:intergenic | 35.0% | |
GCAGAATCAAAATTCAGTCA+TGG | - | chr3.2:63752970-63752989 | None:intergenic | 35.0% | |
GTAATGCAATGACTGATTGA+AGG | - | chr3.2:63755514-63755533 | None:intergenic | 35.0% | |
TATCAAGTTTACAGAAGGGA+GGG | + | chr3.2:63755876-63755895 | MS.gene69268:CDS | 35.0% | |
TGAAAGATGAGGAATGCAAA+TGG | - | chr3.2:63754739-63754758 | None:intergenic | 35.0% | |
TGGAAACAACGAGTTATTCA+AGG | - | chr3.2:63753615-63753634 | None:intergenic | 35.0% | |
TGGTTTAAAGAACTGATGGT+AGG | - | chr3.2:63754902-63754921 | None:intergenic | 35.0% | |
TTATGGTGTGAGATACAAAC+CGG | - | chr3.2:63752622-63752641 | None:intergenic | 35.0% | |
TTCATCATGTTCTTGACAAC+TGG | - | chr3.2:63755338-63755357 | None:intergenic | 35.0% | |
TTGAAGGAAGGCTGTAATAT+TGG | - | chr3.2:63755498-63755517 | None:intergenic | 35.0% | |
! | TTTTAATATTCGCAGAGTGG+TGG | - | chr3.2:63753320-63753339 | None:intergenic | 35.0% |
!! | GTGATTAATTTGCCCTTGTT+TGG | - | chr3.2:63752877-63752896 | None:intergenic | 35.0% |
!!! | ATTTTAGTTACACCGTGTTC+TGG | - | chr3.2:63755138-63755157 | None:intergenic | 35.0% |
!!! | GGTCCTTTAAAATTTTCTCG+CGG | - | chr3.2:63754549-63754568 | None:intergenic | 35.0% |
!!! | GTAGTGACTTTTTTTGACAC+CGG | + | chr3.2:63754606-63754625 | MS.gene69268:intron | 35.0% |
AATCTCGGACTCCATAAACA+TGG | - | chr3.2:63752739-63752758 | None:intergenic | 40.0% | |
ACTGCTCATCAAATTAGCAC+CGG | + | chr3.2:63752600-63752619 | MS.gene69268:CDS | 40.0% | |
AGAACATGATGAAATCCCTG+TGG | + | chr3.2:63755345-63755364 | MS.gene69268:CDS | 40.0% | |
ATCTCGGACTCCATAAACAT+GGG | - | chr3.2:63752738-63752757 | None:intergenic | 40.0% | |
ATCTTTCAGCTCTTGGAGTT+TGG | + | chr3.2:63754751-63754770 | MS.gene69268:CDS | 40.0% | |
ATGTACATGGTTACCTTTGC+AGG | + | chr3.2:63755395-63755414 | MS.gene69268:CDS | 40.0% | |
ATTAGCATAGAGCGAAATCG+CGG | - | chr3.2:63754069-63754088 | None:intergenic | 40.0% | |
ATTAGTGCCAGGAAGTCAAA+AGG | - | chr3.2:63753773-63753792 | None:intergenic | 40.0% | |
ATTCCTCATCTTTCAGCTCT+TGG | + | chr3.2:63754744-63754763 | MS.gene69268:CDS | 40.0% | |
CAATGGTAAACTGAAACCAC+AGG | - | chr3.2:63755364-63755383 | None:intergenic | 40.0% | |
CATTATGGTTCCTCTTGGTT+GGG | + | chr3.2:63754013-63754032 | MS.gene69268:CDS | 40.0% | |
CTAGTGTTCGCATACAATAC+CGG | + | chr3.2:63755186-63755205 | MS.gene69268:CDS | 40.0% | |
CTATCAAGTTTACAGAAGGG+AGG | + | chr3.2:63755875-63755894 | MS.gene69268:CDS | 40.0% | |
CTATGCTCCATGAATATGGA+GGG | + | chr3.2:63754099-63754118 | MS.gene69268:CDS | 40.0% | |
CTGTGGTTTCAGTTTACCAT+TGG | + | chr3.2:63755362-63755381 | MS.gene69268:CDS | 40.0% | |
CTTATGTGCTTGGATACTCA+GGG | + | chr3.2:63753988-63754007 | MS.gene69268:CDS | 40.0% | |
GATTACACTGTTCCAGAACA+CGG | + | chr3.2:63755123-63755142 | MS.gene69268:CDS | 40.0% | |
GCAAAGGTAACCATGTACAT+TGG | - | chr3.2:63755395-63755414 | None:intergenic | 40.0% | |
GTACATTGGTACAAGTCCAA+TGG | - | chr3.2:63755381-63755400 | None:intergenic | 40.0% | |
TATACCGTGTTTCGAGATGA+TGG | + | chr3.2:63754657-63754676 | MS.gene69268:CDS | 40.0% | |
TGCAATGACTGATTGAAGGA+AGG | - | chr3.2:63755510-63755529 | None:intergenic | 40.0% | |
TGCAGATTCATGGTTTCAAG+TGG | + | chr3.2:63753935-63753954 | MS.gene69268:intron | 40.0% | |
TGGACTTGTACCAATGTACA+TGG | + | chr3.2:63755382-63755401 | MS.gene69268:CDS | 40.0% | |
TTAGTGCCAGGAAGTCAAAA+GGG | - | chr3.2:63753772-63753791 | None:intergenic | 40.0% | |
TTCAGCAAGAACACGAATCT+CGG | - | chr3.2:63752754-63752773 | None:intergenic | 40.0% | |
TTTGTCGGGACTAAATTGAG+TGG | - | chr3.2:63754416-63754435 | None:intergenic | 40.0% | |
! | GCAGATTCATGGTTTCAAGT+GGG | + | chr3.2:63753936-63753955 | MS.gene69268:intron | 40.0% |
! | GGACCGCGAGAAAATTTTAA+AGG | + | chr3.2:63754543-63754562 | MS.gene69268:intron | 40.0% |
! | TATTTGCTGAATAGCGTGCA+CGG | + | chr3.2:63755449-63755468 | MS.gene69268:CDS | 40.0% |
!! | ACTGGTTACATCATTTTGGC+TGG | + | chr3.2:63754320-63754339 | MS.gene69268:CDS | 40.0% |
!! | TTGGTGCTGTCGATTAAAGA+TGG | + | chr3.2:63754819-63754838 | MS.gene69268:CDS | 40.0% |
!!! | TCTTTTAGAGTCGGAGTAAG+AGG | + | chr3.2:63755710-63755729 | MS.gene69268:CDS | 40.0% |
ACTCCAAGAGCTGAAAGATG+AGG | - | chr3.2:63754750-63754769 | None:intergenic | 45.0% | |
AGAACACAGGTTATTAGGCC+AGG | - | chr3.2:63755601-63755620 | None:intergenic | 45.0% | |
AGCCGCTATGAATGTGTTGA+AGG | - | chr3.2:63755747-63755766 | None:intergenic | 45.0% | |
ATAAGCCCAGTATCCTGCAA+AGG | - | chr3.2:63755411-63755430 | None:intergenic | 45.0% | |
CACACCATCATCTCGAAACA+CGG | - | chr3.2:63754664-63754683 | None:intergenic | 45.0% | |
CACCACAGTGAACGTAAAAC+CGG | - | chr3.2:63754628-63754647 | None:intergenic | 45.0% | |
CAGTTGCAGCAATAGACATG+AGG | - | chr3.2:63755928-63755947 | None:intergenic | 45.0% | |
CATTCCTGGCAATGCATTGT+TGG | - | chr3.2:63755088-63755107 | None:intergenic | 45.0% | |
CCAACCAAGAGGAACCATAA+TGG | - | chr3.2:63754015-63754034 | None:intergenic | 45.0% | |
CCAGCTATAGCAATGCAGTA+CGG | - | chr3.2:63754696-63754715 | None:intergenic | 45.0% | |
CCATTATGGTTCCTCTTGGT+TGG | + | chr3.2:63754012-63754031 | MS.gene69268:CDS | 45.0% | |
CTAACCAACAATGCATTGCC+AGG | + | chr3.2:63755081-63755100 | MS.gene69268:intron | 45.0% | |
CTATGAATGTGTTGAAGGCC+AGG | - | chr3.2:63755742-63755761 | None:intergenic | 45.0% | |
CTCTCGAAATCTCCAAGGAA+TGG | - | chr3.2:63755776-63755795 | None:intergenic | 45.0% | |
GAAAGAACATGACGCACATG+CGG | + | chr3.2:63752802-63752821 | MS.gene69268:intron | 45.0% | |
GACAACTGGCTGCTTAATTG+TGG | - | chr3.2:63755324-63755343 | None:intergenic | 45.0% | |
GATACTAGATACGGGATCAG+TGG | + | chr3.2:63755662-63755681 | MS.gene69268:CDS | 45.0% | |
GATCAGTGGAGAAGCAATGA+AGG | + | chr3.2:63755676-63755695 | MS.gene69268:CDS | 45.0% | |
GCTATGCTCCATGAATATGG+AGG | + | chr3.2:63754098-63754117 | MS.gene69268:CDS | 45.0% | |
GCTTATGTGCTTGGATACTC+AGG | + | chr3.2:63753987-63754006 | MS.gene69268:CDS | 45.0% | |
GGCCTTCAACACATTCATAG+CGG | + | chr3.2:63755742-63755761 | MS.gene69268:CDS | 45.0% | |
GGTTACCTTTGCAGGATACT+GGG | + | chr3.2:63755403-63755422 | MS.gene69268:CDS | 45.0% | |
GTCAACAGTGCTTATGTGCT+TGG | + | chr3.2:63753978-63753997 | MS.gene69268:CDS | 45.0% | |
GTCTATCTGACCTGTATCTC+AGG | - | chr3.2:63755219-63755238 | None:intergenic | 45.0% | |
GTCTATTGCTGCAACTGTTG+CGG | + | chr3.2:63755931-63755950 | MS.gene69268:CDS | 45.0% | |
GTCTTGTCCCTCCATATTCA+TGG | - | chr3.2:63754109-63754128 | None:intergenic | 45.0% | |
GTGCACGCTATTCAGCAAAT+AGG | - | chr3.2:63755450-63755469 | None:intergenic | 45.0% | |
TAGTGCCAGGAAGTCAAAAG+GGG | - | chr3.2:63753771-63753790 | None:intergenic | 45.0% | |
TCAGCTCTTGGAGTTTGGTT+GGG | + | chr3.2:63754756-63754775 | MS.gene69268:CDS | 45.0% | |
TGAGACTCTCGAAATCTCCA+AGG | - | chr3.2:63755781-63755800 | None:intergenic | 45.0% | |
TGGATACTCAGGGACCATTA+TGG | + | chr3.2:63753998-63754017 | MS.gene69268:CDS | 45.0% | |
TGGTTACCTTTGCAGGATAC+TGG | + | chr3.2:63755402-63755421 | MS.gene69268:CDS | 45.0% | |
TTCAGCTCTTGGAGTTTGGT+TGG | + | chr3.2:63754755-63754774 | MS.gene69268:CDS | 45.0% | |
TTTGCAGGATACTGGGCTTA+TGG | + | chr3.2:63755410-63755429 | MS.gene69268:CDS | 45.0% | |
! | TTTAGAGTCGGAGTAAGAGG+TGG | + | chr3.2:63755713-63755732 | MS.gene69268:CDS | 45.0% |
! | TTTTACGTTCACTGTGGTGC+AGG | + | chr3.2:63754629-63754648 | MS.gene69268:intron | 45.0% |
!! | ATACTATAAAATTATTTAAA+AGG | - | chr3.2:63752656-63752675 | None:intergenic | 5.0% |
!!! | TTTTATATTTAATTTTGAAA+GGG | + | chr3.2:63752686-63752705 | MS.gene69268:intron | 5.0% |
AGTGCCAGGAAGTCAAAAGG+GGG | - | chr3.2:63753770-63753789 | None:intergenic | 50.0% | |
ATGGTTCCTCTTGGTTGGGT+AGG | + | chr3.2:63754017-63754036 | MS.gene69268:CDS | 50.0% | |
CCGTACTGCATTGCTATAGC+TGG | + | chr3.2:63754693-63754712 | MS.gene69268:CDS | 50.0% | |
CGAGCAGGTGAATTCATTCC+TGG | - | chr3.2:63755102-63755121 | None:intergenic | 50.0% | |
GGAACAGTGTAATCTCGAGC+AGG | - | chr3.2:63755117-63755136 | None:intergenic | 50.0% | |
GGAGATTTCGAGAGTCTCAC+AGG | + | chr3.2:63755782-63755801 | MS.gene69268:CDS | 50.0% | |
GGGACCATTATGGTTCCTCT+TGG | + | chr3.2:63754008-63754027 | MS.gene69268:CDS | 50.0% | |
TCCAGCTTGGGTGAAAGCTT+TGG | + | chr3.2:63755472-63755491 | MS.gene69268:CDS | 50.0% | |
TGGTTCCTCTTGGTTGGGTA+GGG | + | chr3.2:63754018-63754037 | MS.gene69268:CDS | 50.0% | |
TTTACAGAAGGGAGGGCTCT+GGG | + | chr3.2:63755883-63755902 | MS.gene69268:CDS | 50.0% | |
! | CTGTATCTCAGGAAGCATGC+CGG | - | chr3.2:63755208-63755227 | None:intergenic | 50.0% |
!! | CACTGTTGACTCCAGTAGTG+AGG | - | chr3.2:63753968-63753987 | None:intergenic | 50.0% |
!! | TTCGCAGAGTGGTGGATTGA+CGG | - | chr3.2:63753312-63753331 | None:intergenic | 50.0% |
!!! | CACCGGTTTTACGTTCACTG+TGG | + | chr3.2:63754623-63754642 | MS.gene69268:intron | 50.0% |
CGGAGTAAGAGGTGGTTACC+TGG | + | chr3.2:63755721-63755740 | MS.gene69268:CDS | 55.0% | |
CGGCATGCTTCCTGAGATAC+AGG | + | chr3.2:63755206-63755225 | MS.gene69268:CDS | 55.0% | |
CTGCAACTGTTGCGGCAGTA+CGG | + | chr3.2:63755939-63755958 | MS.gene69268:CDS | 55.0% | |
GCCAAAGCTTTCACCCAAGC+TGG | - | chr3.2:63755476-63755495 | None:intergenic | 55.0% | |
GGTTCCTCTTGGTTGGGTAG+GGG | + | chr3.2:63754019-63754038 | MS.gene69268:CDS | 55.0% | |
GTGCCAGGAAGTCAAAAGGG+GGG | - | chr3.2:63753769-63753788 | None:intergenic | 55.0% | |
GTGGGATGTGTCCTCACTAC+TGG | + | chr3.2:63753954-63753973 | MS.gene69268:CDS | 55.0% | |
GTTCCTCTTGGTTGGGTAGG+GGG | + | chr3.2:63754020-63754039 | MS.gene69268:CDS | 55.0% | |
GTTTACAGAAGGGAGGGCTC+TGG | + | chr3.2:63755882-63755901 | MS.gene69268:CDS | 55.0% | |
!!! | ACACCCCCCTTTTGACTTCC+TGG | + | chr3.2:63753763-63753782 | MS.gene69268:intron | 55.0% |
ACACCCCCTACCCAACCAAG+AGG | - | chr3.2:63754026-63754045 | None:intergenic | 60.0% | |
ATAGCGTGCACGGTCCAGCT+TGG | + | chr3.2:63755459-63755478 | MS.gene69268:CDS | 60.0% | |
GCGGCTCTTCTGCCATTCCT+TGG | + | chr3.2:63755761-63755780 | MS.gene69268:CDS | 60.0% | |
TAGCGTGCACGGTCCAGCTT+GGG | + | chr3.2:63755460-63755479 | MS.gene69268:CDS | 60.0% | |
! | GGTTGGGTAGGGGGTGTAGT+TGG | + | chr3.2:63754029-63754048 | MS.gene69268:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 63752540 | 63756009 | 63752540 | ID=MS.gene69268 |
chr3.2 | mRNA | 63752540 | 63756009 | 63752540 | ID=MS.gene69268.t1;Parent=MS.gene69268 |
chr3.2 | exon | 63752540 | 63752621 | 63752540 | ID=MS.gene69268.t1.exon1;Parent=MS.gene69268.t1 |
chr3.2 | CDS | 63752540 | 63752621 | 63752540 | ID=cds.MS.gene69268.t1;Parent=MS.gene69268.t1 |
chr3.2 | exon | 63753940 | 63754164 | 63753940 | ID=MS.gene69268.t1.exon2;Parent=MS.gene69268.t1 |
chr3.2 | CDS | 63753940 | 63754164 | 63753940 | ID=cds.MS.gene69268.t1;Parent=MS.gene69268.t1 |
chr3.2 | exon | 63754261 | 63754355 | 63754261 | ID=MS.gene69268.t1.exon3;Parent=MS.gene69268.t1 |
chr3.2 | CDS | 63754261 | 63754355 | 63754261 | ID=cds.MS.gene69268.t1;Parent=MS.gene69268.t1 |
chr3.2 | exon | 63754651 | 63754840 | 63754651 | ID=MS.gene69268.t1.exon4;Parent=MS.gene69268.t1 |
chr3.2 | CDS | 63754651 | 63754840 | 63754651 | ID=cds.MS.gene69268.t1;Parent=MS.gene69268.t1 |
chr3.2 | exon | 63755103 | 63755227 | 63755103 | ID=MS.gene69268.t1.exon5;Parent=MS.gene69268.t1 |
chr3.2 | CDS | 63755103 | 63755227 | 63755103 | ID=cds.MS.gene69268.t1;Parent=MS.gene69268.t1 |
chr3.2 | exon | 63755320 | 63755535 | 63755320 | ID=MS.gene69268.t1.exon6;Parent=MS.gene69268.t1 |
chr3.2 | CDS | 63755320 | 63755535 | 63755320 | ID=cds.MS.gene69268.t1;Parent=MS.gene69268.t1 |
chr3.2 | exon | 63755632 | 63756009 | 63755632 | ID=MS.gene69268.t1.exon7;Parent=MS.gene69268.t1 |
chr3.2 | CDS | 63755632 | 63756009 | 63755632 | ID=cds.MS.gene69268.t1;Parent=MS.gene69268.t1 |
Gene Sequence |
Protein sequence |