Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70346.t1 | XP_003630080.1 | 95.6 | 273 | 12 | 0 | 1 | 273 | 1 | 273 | 1.60E-145 | 525.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70346.t1 | Q5HZH2 | 49.5 | 198 | 100 | 0 | 57 | 254 | 60 | 257 | 4.8e-50 | 199.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70346.t1 | G7LAF7 | 95.6 | 273 | 12 | 0 | 1 | 273 | 1 | 273 | 1.1e-145 | 525.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049255 | MS.gene70346 | 0.829486 | 5.01E-55 | -1.69E-46 |
| MS.gene049341 | MS.gene70346 | 0.802619 | 5.15E-49 | -1.69E-46 |
| MS.gene049424 | MS.gene70346 | 0.821141 | 4.73E-53 | -1.69E-46 |
| MS.gene050277 | MS.gene70346 | 0.850918 | 1.24E-60 | -1.69E-46 |
| MS.gene050987 | MS.gene70346 | 0.811521 | 6.72E-51 | -1.69E-46 |
| MS.gene051243 | MS.gene70346 | 0.848905 | 4.55E-60 | -1.69E-46 |
| MS.gene052286 | MS.gene70346 | 0.802207 | 6.26E-49 | -1.69E-46 |
| MS.gene053188 | MS.gene70346 | 0.800523 | 1.38E-48 | -1.69E-46 |
| MS.gene054537 | MS.gene70346 | 0.802222 | 6.21E-49 | -1.69E-46 |
| MS.gene056760 | MS.gene70346 | 0.810612 | 1.06E-50 | -1.69E-46 |
| MS.gene057140 | MS.gene70346 | 0.846044 | 2.78E-59 | -1.69E-46 |
| MS.gene057234 | MS.gene70346 | 0.821418 | 4.08E-53 | -1.69E-46 |
| MS.gene057392 | MS.gene70346 | 0.82368 | 1.22E-53 | -1.69E-46 |
| MS.gene05795 | MS.gene70346 | 0.803089 | 4.12E-49 | -1.69E-46 |
| MS.gene058054 | MS.gene70346 | 0.810549 | 1.09E-50 | -1.69E-46 |
| MS.gene058055 | MS.gene70346 | 0.831478 | 1.63E-55 | -1.69E-46 |
| MS.gene058126 | MS.gene70346 | 0.814662 | 1.37E-51 | -1.69E-46 |
| MS.gene058906 | MS.gene70346 | 0.801755 | 7.75E-49 | -1.69E-46 |
| MS.gene059317 | MS.gene70346 | 0.813816 | 2.11E-51 | -1.69E-46 |
| MS.gene05978 | MS.gene70346 | 0.815758 | 7.85E-52 | -1.69E-46 |
| MS.gene060297 | MS.gene70346 | 0.803287 | 3.75E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70346.t1 | MTR_8g091510 | 98.168 | 273 | 5 | 0 | 1 | 273 | 1 | 273 | 0.0 | 556 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70346.t1 | AT5G10070 | 64.729 | 258 | 83 | 2 | 11 | 265 | 5 | 257 | 7.70e-115 | 331 |
| MS.gene70346.t1 | AT5G10070 | 68.280 | 186 | 54 | 1 | 11 | 196 | 5 | 185 | 4.59e-90 | 265 |
Find 61 sgRNAs with CRISPR-Local
Find 287 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACATTGCAAGCTTGATTT+TGG | 0.103207 | 4.2:+10480279 | None:intergenic |
| GGGCTGTTGACACAGGATTT+TGG | 0.156208 | 4.2:-10479928 | MS.gene70346:intron |
| CATGGCCGACCATAATTTAT+TGG | 0.182712 | 4.2:+10477929 | None:intergenic |
| TGTTGCTTGGCAAGTTTAAC+TGG | 0.229226 | 4.2:-10477493 | MS.gene70346:CDS |
| CAACAGCCAATCCTTTATTC+TGG | 0.275842 | 4.2:+10478645 | None:intergenic |
| TGGCTGCTGCTTTGACAATA+TGG | 0.286533 | 4.2:-10477883 | MS.gene70346:intron |
| TACTCTTTAATCCAGAATAA+AGG | 0.315486 | 4.2:-10478656 | MS.gene70346:CDS |
| TTACGTGTGACTAATGGTTT+TGG | 0.315588 | 4.2:-10478960 | MS.gene70346:CDS |
| AAATAATTTCAGCACTGTTT+TGG | 0.333601 | 4.2:+10476685 | None:intergenic |
| GCGGCAAACCCAATAAATTA+TGG | 0.347803 | 4.2:-10477938 | MS.gene70346:CDS |
| TTATTTCTGTTCAAAATGAT+TGG | 0.353309 | 4.2:-10476668 | MS.gene70346:CDS |
| ATGGCCGACCATAATTTATT+GGG | 0.359883 | 4.2:+10477930 | None:intergenic |
| CTCTTCATCACTATTGTCTA+TGG | 0.381809 | 4.2:+10476298 | None:intergenic |
| AACTCTTCCGATTCTGATGA+TGG | 0.381819 | 4.2:-10476356 | MS.gene70346:CDS |
| TCACTATCAGTAGGAGCCTT+TGG | 0.382863 | 4.2:+10476624 | None:intergenic |
| CGGGCGCAAGCTTTCAAGAC+TGG | 0.386858 | 4.2:-10479881 | MS.gene70346:CDS |
| GCGCAGCGCAACTTCACAAA+AGG | 0.400711 | 4.2:+10478590 | None:intergenic |
| GAAAATCAAAGCTGCGTTCA+AGG | 0.401936 | 4.2:-10480419 | MS.gene70346:intron |
| GCTATCTTGTGTAGAGGCCT+TGG | 0.413021 | 4.2:-10477903 | MS.gene70346:CDS |
| GAGACACATTGCTTTCCAAC+TGG | 0.415063 | 4.2:+10478689 | None:intergenic |
| CGACTGGATTGAGCATGATT+GGG | 0.424602 | 4.2:+10480467 | None:intergenic |
| GATTAAAGAGTAATCTTCTC+TGG | 0.428373 | 4.2:+10478667 | None:intergenic |
| TCGACTGGATTGAGCATGAT+TGG | 0.433538 | 4.2:+10480466 | None:intergenic |
| TGAGAGTTGGTTGTGTCGAC+TGG | 0.435345 | 4.2:+10480451 | None:intergenic |
| GGGCGCAAGCTTTCAAGACT+GGG | 0.452113 | 4.2:-10479880 | MS.gene70346:CDS |
| TTGGCTATCACAAGCGCGTC+AGG | 0.460396 | 4.2:-10476649 | MS.gene70346:CDS |
| GTTGCTTGGCAAGTTTAACT+GGG | 0.464029 | 4.2:-10477492 | MS.gene70346:CDS |
| CAGGAGTTACGTGTGACTAA+TGG | 0.482383 | 4.2:-10478966 | MS.gene70346:CDS |
| TTTAATCCAGAATAAAGGAT+TGG | 0.488019 | 4.2:-10478651 | MS.gene70346:CDS |
| GAATAAAGGATTGGCTGTTG+TGG | 0.490897 | 4.2:-10478642 | MS.gene70346:CDS |
| GGCTGTTGTGGATTGCTCGT+GGG | 0.496557 | 4.2:-10478630 | MS.gene70346:CDS |
| TATGCTGCATGGCAGTTGTT+AGG | 0.502876 | 4.2:-10476403 | MS.gene70346:intron |
| CAAAATCAAGCTTGCAATGT+GGG | 0.510512 | 4.2:-10480278 | MS.gene70346:intron |
| TGGAAGCCCATCATCAGAAT+CGG | 0.511595 | 4.2:+10476349 | None:intergenic |
| GAAACAGCAAATCTGTTGCT+TGG | 0.521180 | 4.2:-10477506 | MS.gene70346:CDS |
| CAGTCTTGAAAGCTTGCGCC+CGG | 0.525147 | 4.2:+10479882 | None:intergenic |
| ATGGGCTTCCACCTCTTGAA+AGG | 0.540522 | 4.2:-10476337 | MS.gene70346:CDS |
| TTTCGTTGTCTAGTGAGAGT+TGG | 0.547894 | 4.2:+10480438 | None:intergenic |
| TTCATGTTCCTTTCAAGAGG+TGG | 0.548622 | 4.2:+10476329 | None:intergenic |
| ACTCTTCCGATTCTGATGAT+GGG | 0.551069 | 4.2:-10476355 | MS.gene70346:CDS |
| GGGTTTGCCGCTACAAGCCA+TGG | 0.551853 | 4.2:+10477950 | None:intergenic |
| TGGCTGTTGTGGATTGCTCG+TGG | 0.556974 | 4.2:-10478631 | MS.gene70346:CDS |
| TGATTCATGTTCCTTTCAAG+AGG | 0.557002 | 4.2:+10476326 | None:intergenic |
| TGCAGTGCCATGGCTTGTAG+CGG | 0.560226 | 4.2:-10477957 | MS.gene70346:intron |
| TATTGTCAAAGCAGCAGCCA+AGG | 0.583613 | 4.2:+10477886 | None:intergenic |
| TCTAACTGCAGAACCTTGTG+AGG | 0.588442 | 4.2:-10480335 | MS.gene70346:intron |
| ATGTCAGCTATCTTGTGTAG+AGG | 0.595536 | 4.2:-10477909 | MS.gene70346:CDS |
| GGGTGATAATGAAGAATCAG+AGG | 0.611722 | 4.2:-10480314 | MS.gene70346:CDS |
| TCTTCATTATCACCCTCACA+AGG | 0.612623 | 4.2:+10480322 | None:intergenic |
| TTGCTTGGCAAGTTTAACTG+GGG | 0.613832 | 4.2:-10477491 | MS.gene70346:CDS |
| CCAATACAGGGAATTACTGA+AGG | 0.625012 | 4.2:-10476721 | MS.gene70346:intron |
| ACAAGCGCGTCAGGTTCCAA+AGG | 0.626008 | 4.2:-10476640 | MS.gene70346:CDS |
| CAAACCCAATAAATTATGGT+CGG | 0.643896 | 4.2:-10477934 | MS.gene70346:CDS |
| GACTGGATTGAGCATGATTG+GGG | 0.648452 | 4.2:+10480468 | None:intergenic |
| TCTACACAAGATAGCTGACA+TGG | 0.652062 | 4.2:+10477911 | None:intergenic |
| CCAAAATCAAGCTTGCAATG+TGG | 0.658475 | 4.2:-10480279 | MS.gene70346:CDS |
| TATAAGTTCATACAGAGGCG+AGG | 0.658960 | 4.2:+10478563 | None:intergenic |
| CACAGACCTTCACTATCAGT+AGG | 0.664914 | 4.2:+10476615 | None:intergenic |
| CTAACTGCAGAACCTTGTGA+GGG | 0.666455 | 4.2:-10480334 | MS.gene70346:intron |
| AAGGCTCCTACTGATAGTGA+AGG | 0.667476 | 4.2:-10476621 | MS.gene70346:intron |
| GTTTGCGAGAGAGAGATGGG+CGG | 0.777519 | 4.2:-10480524 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAATTTGAATAAAAATTT+AGG | - | chr4.2:10479143-10479162 | MS.gene70346:intron | 10.0% |
| !! | AATTTGATTCTCAATTATAT+GGG | - | chr4.2:10480016-10480035 | MS.gene70346:intron | 15.0% |
| !! | ATATAATTGAGAATCAAATT+CGG | + | chr4.2:10480016-10480035 | None:intergenic | 15.0% |
| !! | CAAAGTAAATTATTAAGTTT+GGG | + | chr4.2:10479169-10479188 | None:intergenic | 15.0% |
| !! | TTAAATTAGTTGCAAAATAT+TGG | - | chr4.2:10477187-10477206 | MS.gene70346:intron | 15.0% |
| !!! | CAAAAAATTGATGATATAAA+AGG | - | chr4.2:10477652-10477671 | MS.gene70346:intron | 15.0% |
| !!! | CATTATTTTTTACATTCAAT+AGG | - | chr4.2:10476984-10477003 | MS.gene70346:intron | 15.0% |
| !!! | TGTTATATATCTATTTTACA+CGG | - | chr4.2:10480208-10480227 | MS.gene70346:intron | 15.0% |
| !!! | TGTTTTTTATACAATTTCTT+TGG | - | chr4.2:10477604-10477623 | MS.gene70346:intron | 15.0% |
| !!! | TTAACAAAAAAATTTGTTCA+TGG | + | chr4.2:10479680-10479699 | None:intergenic | 15.0% |
| !!! | TTTTGTTTACTTATATGAAT+GGG | - | chr4.2:10477475-10477494 | MS.gene70346:CDS | 15.0% |
| !! | AAAAATTCACAATATATCAG+AGG | + | chr4.2:10480353-10480372 | None:intergenic | 20.0% |
| !! | AAATCTAATATTTCATATGG+AGG | - | chr4.2:10477415-10477434 | MS.gene70346:intron | 20.0% |
| !! | ACAGTTAAATTATGTTCATA+AGG | + | chr4.2:10476590-10476609 | None:intergenic | 20.0% |
| !! | ATTTGATTCTCAATTATATG+GGG | - | chr4.2:10480017-10480036 | MS.gene70346:intron | 20.0% |
| !! | CTTATAAATATGCTTCATAA+AGG | + | chr4.2:10479593-10479612 | None:intergenic | 20.0% |
| !! | CTTATTATATAATATGTCAG+TGG | - | chr4.2:10477786-10477805 | MS.gene70346:intron | 20.0% |
| !! | GAATTTGATTCTCAATTATA+TGG | - | chr4.2:10480015-10480034 | MS.gene70346:intron | 20.0% |
| !! | GCAAAGTAAATTATTAAGTT+TGG | + | chr4.2:10479170-10479189 | None:intergenic | 20.0% |
| !! | TAGTTATGTATAGATAACTA+GGG | - | chr4.2:10479734-10479753 | MS.gene70346:intron | 20.0% |
| !! | TCCAAATCTAATATTTCATA+TGG | - | chr4.2:10477412-10477431 | MS.gene70346:intron | 20.0% |
| !! | TCCATATGAAATATTAGATT+TGG | + | chr4.2:10477416-10477435 | None:intergenic | 20.0% |
| !! | TCTTAAAAACGTTAATAAGA+AGG | + | chr4.2:10477910-10477929 | None:intergenic | 20.0% |
| !! | TTAATAATTTACTTTGCAGT+TGG | - | chr4.2:10479173-10479192 | MS.gene70346:intron | 20.0% |
| !! | TTAGTTATGTATAGATAACT+AGG | - | chr4.2:10479733-10479752 | MS.gene70346:intron | 20.0% |
| !! | TTATTGAGATGAAAACTATT+TGG | - | chr4.2:10479233-10479252 | MS.gene70346:intron | 20.0% |
| !! | TTCACTTATGATATTTACAA+GGG | - | chr4.2:10479411-10479430 | MS.gene70346:intron | 20.0% |
| !! | TTTCACTTATGATATTTACA+AGG | - | chr4.2:10479410-10479429 | MS.gene70346:intron | 20.0% |
| !!! | AATTTCATGTATAGTTTTAG+AGG | + | chr4.2:10477282-10477301 | None:intergenic | 20.0% |
| !!! | CAATATTTTGTTTTCTCTTT+TGG | - | chr4.2:10477999-10478018 | MS.gene70346:intron | 20.0% |
| !!! | CTTTTGTTTACTTATATGAA+TGG | - | chr4.2:10477474-10477493 | MS.gene70346:CDS | 20.0% |
| !!! | GATTAGTTTTTGTTTTTTTC+TGG | - | chr4.2:10477099-10477118 | MS.gene70346:intron | 20.0% |
| !!! | GTTATATATCTATTTTACAC+GGG | - | chr4.2:10480209-10480228 | MS.gene70346:intron | 20.0% |
| !!! | TTAAAATAGTTTTGAATGCT+AGG | - | chr4.2:10477143-10477162 | MS.gene70346:intron | 20.0% |
| !!! | TTATATATCTATTTTACACG+GGG | - | chr4.2:10480210-10480229 | MS.gene70346:intron | 20.0% |
| !!! | TTATTTCTGTTCAAAATGAT+TGG | - | chr4.2:10480130-10480149 | MS.gene70346:intron | 20.0% |
| !!! | TTTTTATATCATGAACTACA+AGG | + | chr4.2:10479532-10479551 | None:intergenic | 20.0% |
| ! | AAACAAAATATTGCTTCACA+AGG | + | chr4.2:10477992-10478011 | None:intergenic | 25.0% |
| ! | AAGTTATGTAAGTTACGTTA+CGG | + | chr4.2:10479561-10479580 | None:intergenic | 25.0% |
| ! | ATAAGCTACTATTCTAACAA+AGG | + | chr4.2:10476620-10476639 | None:intergenic | 25.0% |
| ! | ATCAGCCAACATAAAAAATA+TGG | + | chr4.2:10479040-10479059 | None:intergenic | 25.0% |
| ! | CATATTAGATCTCTCAATTA+AGG | + | chr4.2:10479845-10479864 | None:intergenic | 25.0% |
| ! | CATGATATTAGATCCAAATT+CGG | + | chr4.2:10476841-10476860 | None:intergenic | 25.0% |
| ! | CATTACATTATTTGTGATTG+AGG | + | chr4.2:10478809-10478828 | None:intergenic | 25.0% |
| ! | GTGAAACAAATATCAATTAG+AGG | + | chr4.2:10477234-10477253 | None:intergenic | 25.0% |
| ! | GTTAAATGAAAAAAGCAACA+GGG | - | chr4.2:10479476-10479495 | MS.gene70346:intron | 25.0% |
| ! | GTTGATTATGTAATCTATGA+AGG | - | chr4.2:10477740-10477759 | MS.gene70346:intron | 25.0% |
| ! | TAATTCCAGTATTCATTTGT+AGG | + | chr4.2:10479638-10479657 | None:intergenic | 25.0% |
| ! | TACTCTTTAATCCAGAATAA+AGG | - | chr4.2:10478142-10478161 | MS.gene70346:intron | 25.0% |
| ! | TCAGCCAACATAAAAAATAT+GGG | + | chr4.2:10479039-10479058 | None:intergenic | 25.0% |
| ! | TGTTAAATGAAAAAAGCAAC+AGG | - | chr4.2:10479475-10479494 | MS.gene70346:intron | 25.0% |
| ! | TTGACAATATGGTATAGAAA+TGG | - | chr4.2:10478926-10478945 | MS.gene70346:intron | 25.0% |
| ! | TTTAATCCAGAATAAAGGAT+TGG | - | chr4.2:10478147-10478166 | MS.gene70346:intron | 25.0% |
| !! | AAATAATTTCAGCACTGTTT+TGG | + | chr4.2:10480116-10480135 | None:intergenic | 25.0% |
| !! | AAATTGATGATATAAAAGGC+TGG | - | chr4.2:10477656-10477675 | MS.gene70346:intron | 25.0% |
| !! | AACTTTCTTTTAACCAATAC+AGG | - | chr4.2:10480064-10480083 | MS.gene70346:intron | 25.0% |
| !! | ACTTTCTTTTAACCAATACA+GGG | - | chr4.2:10480065-10480084 | MS.gene70346:intron | 25.0% |
| !! | ATTACCAATGCGTTTTTAAA+TGG | - | chr4.2:10479118-10479137 | MS.gene70346:intron | 25.0% |
| !! | ATTTCAGATACAATTTTTGC+AGG | + | chr4.2:10479009-10479028 | None:intergenic | 25.0% |
| !! | TTTCAGATACAATTTTTGCA+GGG | + | chr4.2:10479008-10479027 | None:intergenic | 25.0% |
| !!! | ATATTTTCACTTTGCTATCT+AGG | - | chr4.2:10479383-10479402 | MS.gene70346:intron | 25.0% |
| !!! | CTTTTTTCATTTAACAGTGT+GGG | + | chr4.2:10479471-10479490 | None:intergenic | 25.0% |
| !!! | TTATTTTTGACTAGACACTT+TGG | - | chr4.2:10478957-10478976 | MS.gene70346:CDS | 25.0% |
| AAAATATTGGACGATCACAT+TGG | - | chr4.2:10477200-10477219 | MS.gene70346:intron | 30.0% | |
| AATAACGTCGTGTTGAAATT+TGG | - | chr4.2:10478394-10478413 | MS.gene70346:intron | 30.0% | |
| ACCACAGATTAAAGTAATTG+TGG | + | chr4.2:10477533-10477552 | None:intergenic | 30.0% | |
| ACTTTAATCTGTGGTAATAC+TGG | - | chr4.2:10477538-10477557 | MS.gene70346:intron | 30.0% | |
| ATAACGTCGTGTTGAAATTT+GGG | - | chr4.2:10478395-10478414 | MS.gene70346:intron | 30.0% | |
| ATAATTTACTTTGCAGTTGG+TGG | - | chr4.2:10479176-10479195 | MS.gene70346:intron | 30.0% | |
| ATCAAATTAATGCAGGTACA+AGG | + | chr4.2:10477054-10477073 | None:intergenic | 30.0% | |
| ATCAGATACAAGAGTAATCA+AGG | + | chr4.2:10479812-10479831 | None:intergenic | 30.0% | |
| ATCATACTTGAAGTATGAAG+AGG | - | chr4.2:10477358-10477377 | MS.gene70346:intron | 30.0% | |
| CAAACCCAATAAATTATGGT+CGG | - | chr4.2:10478864-10478883 | MS.gene70346:intron | 30.0% | |
| CAGATACTATGATATCTCTA+TGG | + | chr4.2:10477565-10477584 | None:intergenic | 30.0% | |
| CCACAGATTAAAGTAATTGT+GGG | + | chr4.2:10477532-10477551 | None:intergenic | 30.0% | |
| CGAAACAATTGGAATGAATT+TGG | + | chr4.2:10479960-10479979 | None:intergenic | 30.0% | |
| CTAATATCATGCATGTCATT+GGG | - | chr4.2:10476850-10476869 | MS.gene70346:intron | 30.0% | |
| CTCTTGAGAAGAGTTTATAA+AGG | + | chr4.2:10478676-10478695 | None:intergenic | 30.0% | |
| CTGATACCATGTTGAAATTT+GGG | - | chr4.2:10478602-10478621 | MS.gene70346:CDS | 30.0% | |
| CTTCAACATCAAATTAATGC+AGG | + | chr4.2:10477061-10477080 | None:intergenic | 30.0% | |
| GATTAAAGAGTAATCTTCTC+TGG | + | chr4.2:10478134-10478153 | None:intergenic | 30.0% | |
| GGCAAAAAGATTAAATGCAA+TGG | + | chr4.2:10478773-10478792 | None:intergenic | 30.0% | |
| GTTCCATAAAAATCCACAAT+CGG | + | chr4.2:10476749-10476768 | None:intergenic | 30.0% | |
| GTTTACTTATATGAATGGGT+AGG | - | chr4.2:10477479-10477498 | MS.gene70346:CDS | 30.0% | |
| TAGATAAAAGATTGAACGCA+TGG | + | chr4.2:10480260-10480279 | None:intergenic | 30.0% | |
| TCAAATTAATGCAGGTACAA+GGG | + | chr4.2:10477053-10477072 | None:intergenic | 30.0% | |
| TCAGATACAAGAGTAATCAA+GGG | + | chr4.2:10479811-10479830 | None:intergenic | 30.0% | |
| TCTAATATCATGCATGTCAT+TGG | - | chr4.2:10476849-10476868 | MS.gene70346:intron | 30.0% | |
| TCTGATACCATGTTGAAATT+TGG | - | chr4.2:10478601-10478620 | MS.gene70346:CDS | 30.0% | |
| TCTTTGGACAAAAAATCTAG+TGG | - | chr4.2:10477620-10477639 | MS.gene70346:intron | 30.0% | |
| TGATACCATGTTGAAATTTG+GGG | - | chr4.2:10478603-10478622 | MS.gene70346:CDS | 30.0% | |
| TGTTCCATTTAAAAACGCAT+TGG | + | chr4.2:10479125-10479144 | None:intergenic | 30.0% | |
| TTGTGAGTGCAAATACATAT+TGG | - | chr4.2:10477014-10477033 | MS.gene70346:intron | 30.0% | |
| TTTCATGGAAACGAAACAAT+TGG | + | chr4.2:10479971-10479990 | None:intergenic | 30.0% | |
| ! | ATGTTCATAAGGTATCTTTG+AGG | + | chr4.2:10476579-10476598 | None:intergenic | 30.0% |
| ! | ATTTTTATGGAACCCAAAGT+TGG | - | chr4.2:10476756-10476775 | MS.gene70346:intron | 30.0% |
| ! | GAAGAAATCTTTAAGTATCG+TGG | + | chr4.2:10478745-10478764 | None:intergenic | 30.0% |
| ! | GAATGAATTTGGTTCACAAT+TGG | + | chr4.2:10479949-10479968 | None:intergenic | 30.0% |
| ! | TAATCTTTTTGCCTCGTTTA+GGG | - | chr4.2:10478780-10478799 | MS.gene70346:intron | 30.0% |
| ! | TTAATCTTTTTGCCTCGTTT+AGG | - | chr4.2:10478779-10478798 | MS.gene70346:intron | 30.0% |
| ! | TTCAGATACAATTTTTGCAG+GGG | + | chr4.2:10479007-10479026 | None:intergenic | 30.0% |
| !!! | GCTTTTTTCATTTAACAGTG+TGG | + | chr4.2:10479472-10479491 | None:intergenic | 30.0% |
| !!! | GTGTCCCATATTTTTTATGT+TGG | - | chr4.2:10479032-10479051 | MS.gene70346:intron | 30.0% |
| AAATACTGTAGTGTAGAACC+AGG | - | chr4.2:10478300-10478319 | MS.gene70346:intron | 35.0% | |
| AAGCGTATAAGTTCATACAG+AGG | + | chr4.2:10478243-10478262 | None:intergenic | 35.0% | |
| AAGGTTCGAAAGAAATCAAG+AGG | + | chr4.2:10479513-10479532 | None:intergenic | 35.0% | |
| AGGTTCGAAAGAAATCAAGA+GGG | + | chr4.2:10479512-10479531 | None:intergenic | 35.0% | |
| AGTAGTTATTCAGCGAACAA+AGG | + | chr4.2:10478070-10478089 | None:intergenic | 35.0% | |
| ATGGCCGACCATAATTTATT+GGG | + | chr4.2:10478871-10478890 | None:intergenic | 35.0% | |
| CAAAATCAAGCTTGCAATGT+GGG | - | chr4.2:10476520-10476539 | MS.gene70346:intron | 35.0% | |
| CAGATACAAGAGTAATCAAG+GGG | + | chr4.2:10479810-10479829 | None:intergenic | 35.0% | |
| CAGTACCTACAAATGAATAC+TGG | - | chr4.2:10479630-10479649 | MS.gene70346:intron | 35.0% | |
| CCCACAATTACTTTAATCTG+TGG | - | chr4.2:10477529-10477548 | MS.gene70346:intron | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | - | chr4.2:10478420-10478439 | MS.gene70346:intron | 35.0% | |
| CTCTTCATCACTATTGTCTA+TGG | + | chr4.2:10480503-10480522 | None:intergenic | 35.0% | |
| CTGTGAACTAAAGGAGTTTA+TGG | - | chr4.2:10479914-10479933 | MS.gene70346:CDS | 35.0% | |
| GAATCTGATATATCTTGTGC+AGG | - | chr4.2:10477813-10477832 | MS.gene70346:intron | 35.0% | |
| GAGAAGAGTTTACAAAGATG+AGG | + | chr4.2:10478464-10478483 | None:intergenic | 35.0% | |
| GAGAAGAGTTTATAAAGGTG+AGG | + | chr4.2:10478671-10478690 | None:intergenic | 35.0% | |
| GATATTAGATCCAAATTCGG+CGG | + | chr4.2:10476838-10476857 | None:intergenic | 35.0% | |
| GCACAAGATATATCAGATTC+AGG | + | chr4.2:10477813-10477832 | None:intergenic | 35.0% | |
| TAACGTCGTGTTGAAATTTG+GGG | - | chr4.2:10478396-10478415 | MS.gene70346:intron | 35.0% | |
| TGATGATATAAAAGGCTGGT+TGG | - | chr4.2:10477660-10477679 | MS.gene70346:intron | 35.0% | |
| TGATTCATGTTCCTTTCAAG+AGG | + | chr4.2:10480475-10480494 | None:intergenic | 35.0% | |
| TTTGTTTCACATGCTTTCAC+TGG | - | chr4.2:10477244-10477263 | MS.gene70346:intron | 35.0% | |
| ! | ATAAAAGGCTGGTTGGTTAA+TGG | - | chr4.2:10477667-10477686 | MS.gene70346:intron | 35.0% |
| ! | CACATTGCAAGCTTGATTTT+GGG | + | chr4.2:10476521-10476540 | None:intergenic | 35.0% |
| ! | TAAACTCCTTTAGTTCACAG+TGG | + | chr4.2:10479914-10479933 | None:intergenic | 35.0% |
| ! | TACGTGTGACTAATGGTTTT+GGG | - | chr4.2:10477839-10477858 | MS.gene70346:intron | 35.0% |
| ! | TAGAGTTTTTGTAATGCCAC+AGG | - | chr4.2:10477506-10477525 | MS.gene70346:CDS | 35.0% |
| ! | TCAGATACAATTTTTGCAGG+GGG | + | chr4.2:10479006-10479025 | None:intergenic | 35.0% |
| ! | TCTCCGATTGTGGATTTTTA+TGG | - | chr4.2:10476743-10476762 | MS.gene70346:intron | 35.0% |
| ! | TTACGTGTGACTAATGGTTT+TGG | - | chr4.2:10477838-10477857 | MS.gene70346:intron | 35.0% |
| ! | TTCTTTGCTATATCTTGCAG+TGG | - | chr4.2:10479262-10479281 | MS.gene70346:intron | 35.0% |
| ! | TTCTTTTTATTGCAGTGCCA+TGG | - | chr4.2:10478831-10478850 | MS.gene70346:intron | 35.0% |
| !! | TTGTGTTTTTACAGTCCAGT+TGG | - | chr4.2:10478094-10478113 | MS.gene70346:intron | 35.0% |
| !!! | ACTGTTTTGGCATTTAGAGT+AGG | + | chr4.2:10480103-10480122 | None:intergenic | 35.0% |
| AAAGAAATCAAGAGGGACTC+TGG | + | chr4.2:10479505-10479524 | None:intergenic | 40.0% | |
| AACTCTTCCGATTCTGATGA+TGG | - | chr4.2:10480442-10480461 | MS.gene70346:CDS | 40.0% | |
| AACTTCACAGCTAGACGAAA+TGG | - | chr4.2:10477951-10477970 | MS.gene70346:CDS | 40.0% | |
| AAGAAATCAAGAGGGACTCT+GGG | + | chr4.2:10479504-10479523 | None:intergenic | 40.0% | |
| ACGTTATTGCCAGATAGTAG+CGG | + | chr4.2:10478382-10478401 | None:intergenic | 40.0% | |
| ACTCTTCCGATTCTGATGAT+GGG | - | chr4.2:10480443-10480462 | MS.gene70346:CDS | 40.0% | |
| ACTTCACAGCTAGACGAAAT+GGG | - | chr4.2:10477952-10477971 | MS.gene70346:CDS | 40.0% | |
| ATCAGAGCTTGTCGAATTCA+AGG | + | chr4.2:10478587-10478606 | None:intergenic | 40.0% | |
| ATCGGAGATACTCTTAGAAG+AGG | + | chr4.2:10476731-10476750 | None:intergenic | 40.0% | |
| ATGTCAGCTATCTTGTGTAG+AGG | - | chr4.2:10478889-10478908 | MS.gene70346:intron | 40.0% | |
| CAACAGCCAATCCTTTATTC+TGG | + | chr4.2:10478156-10478175 | None:intergenic | 40.0% | |
| CATGGCCGACCATAATTTAT+TGG | + | chr4.2:10478872-10478891 | None:intergenic | 40.0% | |
| CATGTTAGACACGGATTTCA+TGG | + | chr4.2:10479986-10480005 | None:intergenic | 40.0% | |
| CCAAAATCAAGCTTGCAATG+TGG | - | chr4.2:10476519-10476538 | MS.gene70346:intron | 40.0% | |
| CCAATACAGGGAATTACTGA+AGG | - | chr4.2:10480077-10480096 | MS.gene70346:intron | 40.0% | |
| CCTAACAATCATAGCTAGTG+AGG | + | chr4.2:10479760-10479779 | None:intergenic | 40.0% | |
| CCTCACTAGCTATGATTGTT+AGG | - | chr4.2:10479757-10479776 | MS.gene70346:intron | 40.0% | |
| CCTTCAGTAATTCCCTGTAT+TGG | + | chr4.2:10480080-10480099 | None:intergenic | 40.0% | |
| GAAAATCAAAGCTGCGTTCA+AGG | - | chr4.2:10476379-10476398 | MS.gene70346:CDS | 40.0% | |
| GAAACAGCAAATCTGTTGCT+TGG | - | chr4.2:10479292-10479311 | MS.gene70346:intron | 40.0% | |
| GCGGCAAACCCAATAAATTA+TGG | - | chr4.2:10478860-10478879 | MS.gene70346:intron | 40.0% | |
| GCTTTCACTGGAGTAATCTT+GGG | - | chr4.2:10477256-10477275 | MS.gene70346:intron | 40.0% | |
| GTACAGTGAAATTGTGTGCT+AGG | + | chr4.2:10479871-10479890 | None:intergenic | 40.0% | |
| GTGAAACCACTGTGAACTAA+AGG | - | chr4.2:10479905-10479924 | MS.gene70346:CDS | 40.0% | |
| GTTGCTTGGCAAGTTTAACT+GGG | - | chr4.2:10479306-10479325 | MS.gene70346:intron | 40.0% | |
| TAGAACCAGGTTGTCAATAG+CGG | - | chr4.2:10478313-10478332 | MS.gene70346:intron | 40.0% | |
| TAGAGTGGGAATAGTGGTTA+CGG | + | chr4.2:10476784-10476803 | None:intergenic | 40.0% | |
| TATAAGTTCATACAGAGGCG+AGG | + | chr4.2:10478238-10478257 | None:intergenic | 40.0% | |
| TCAGAGCTTGTCGAATTCAA+GGG | + | chr4.2:10478586-10478605 | None:intergenic | 40.0% | |
| TCTACACAAGATAGCTGACA+TGG | + | chr4.2:10478890-10478909 | None:intergenic | 40.0% | |
| TCTTCATTATCACCCTCACA+AGG | + | chr4.2:10476479-10476498 | None:intergenic | 40.0% | |
| TGCTTTCACTGGAGTAATCT+TGG | - | chr4.2:10477255-10477274 | MS.gene70346:intron | 40.0% | |
| TGTTTGTGTACAGCACATTG+CGG | + | chr4.2:10479084-10479103 | None:intergenic | 40.0% | |
| TTAAAGTAATTGTGGGCCTG+TGG | + | chr4.2:10477525-10477544 | None:intergenic | 40.0% | |
| TTAGGCCCCAAATTTCAACA+TGG | + | chr4.2:10478404-10478423 | None:intergenic | 40.0% | |
| TTCATGGCTACATACAGAGA+TGG | + | chr4.2:10479664-10479683 | None:intergenic | 40.0% | |
| TTCATGTTCCTTTCAAGAGG+TGG | + | chr4.2:10480472-10480491 | None:intergenic | 40.0% | |
| TTGCTTGGCAAGTTTAACTG+GGG | - | chr4.2:10479307-10479326 | MS.gene70346:intron | 40.0% | |
| TTTCGTTGTCTAGTGAGAGT+TGG | + | chr4.2:10476363-10476382 | None:intergenic | 40.0% | |
| ! | ACGCTAAAGTAAGGCTTGTT+TGG | + | chr4.2:10476701-10476720 | None:intergenic | 40.0% |
| ! | AGAGTCTTATCTATCCGATG+CGG | - | chr4.2:10478485-10478504 | MS.gene70346:intron | 40.0% |
| ! | AGAGTCTTATCTATCCGATG+TGG | - | chr4.2:10478485-10478504 | MS.gene70346:intron | 40.0% |
| ! | ATATGGAGGAAGCCTTTTGA+GGG | - | chr4.2:10477429-10477448 | MS.gene70346:intron | 40.0% |
| ! | CCACATTGCAAGCTTGATTT+TGG | + | chr4.2:10476522-10476541 | None:intergenic | 40.0% |
| ! | CTTGGTGCATGAATAGGTTT+AGG | - | chr4.2:10478557-10478576 | MS.gene70346:intron | 40.0% |
| ! | GGGTGATAATGAAGAATCAG+AGG | - | chr4.2:10476484-10476503 | MS.gene70346:intron | 40.0% |
| ! | TGAAGTATGAAGAGGCATAG+AGG | - | chr4.2:10477366-10477385 | MS.gene70346:intron | 40.0% |
| ! | TGTTGCTTGGCAAGTTTAAC+TGG | - | chr4.2:10479305-10479324 | MS.gene70346:intron | 40.0% |
| !! | ACGTGTGACTAATGGTTTTG+GGG | - | chr4.2:10477840-10477859 | MS.gene70346:intron | 40.0% |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | + | chr4.2:10478422-10478441 | None:intergenic | 40.0% |
| !! | CTATTTTACACGGGGTGTTA+TGG | - | chr4.2:10480218-10480237 | MS.gene70346:intron | 40.0% |
| !! | GAATAAAGGATTGGCTGTTG+TGG | - | chr4.2:10478156-10478175 | MS.gene70346:intron | 40.0% |
| !! | GGGAATTGCTTTAAGGTACT+TGG | - | chr4.2:10477861-10477880 | MS.gene70346:intron | 40.0% |
| !! | TCTAAGAGTATCTCCGATTG+TGG | - | chr4.2:10476733-10476752 | MS.gene70346:intron | 40.0% |
| !!! | GTTTTGGGGGAATTGCTTTA+AGG | - | chr4.2:10477854-10477873 | MS.gene70346:intron | 40.0% |
| !!! | TTTTTTCCTCCTATGCTGCA+TGG | - | chr4.2:10480384-10480403 | MS.gene70346:intron | 40.0% |
| AACCACTATTCCCACTCTAG+AGG | - | chr4.2:10476785-10476804 | MS.gene70346:intron | 45.0% | |
| ACATGGTACCACTATTGCAG+CGG | - | chr4.2:10478336-10478355 | MS.gene70346:intron | 45.0% | |
| AGTGGTTACGGAACCAACTT+TGG | + | chr4.2:10476772-10476791 | None:intergenic | 45.0% | |
| ATCTATCCGATGTGGCACTT+GGG | - | chr4.2:10478700-10478719 | MS.gene70346:intron | 45.0% | |
| CACAGACCTTCACTATCAGT+AGG | + | chr4.2:10480186-10480205 | None:intergenic | 45.0% | |
| CAGGAGTTACGTGTGACTAA+TGG | - | chr4.2:10477832-10477851 | MS.gene70346:intron | 45.0% | |
| CGACTGGATTGAGCATGATT+GGG | + | chr4.2:10476334-10476353 | None:intergenic | 45.0% | |
| CTAACTGCAGAACCTTGTGA+GGG | - | chr4.2:10476464-10476483 | MS.gene70346:intron | 45.0% | |
| GAAAAACCCAAGTGCCACAT+CGG | + | chr4.2:10478709-10478728 | None:intergenic | 45.0% | |
| GACTGGATTGAGCATGATTG+GGG | + | chr4.2:10476333-10476352 | None:intergenic | 45.0% | |
| GAGACACATTGCTTTCCAAC+TGG | + | chr4.2:10478112-10478131 | None:intergenic | 45.0% | |
| GAGTAATCAAGGGGCTAATC+AGG | + | chr4.2:10479801-10479820 | None:intergenic | 45.0% | |
| GGACGATCACATTGGATCAA+AGG | - | chr4.2:10477208-10477227 | MS.gene70346:intron | 45.0% | |
| GGAGATACTCTTAGAAGAGG+AGG | + | chr4.2:10476728-10476747 | None:intergenic | 45.0% | |
| GGAGGCTAAACGCTAAAGTA+AGG | + | chr4.2:10476710-10476729 | None:intergenic | 45.0% | |
| GGTGAATCGCATGTTAGACA+CGG | + | chr4.2:10479995-10480014 | None:intergenic | 45.0% | |
| GGTGCATGAATAGGTTTAGG+CGG | - | chr4.2:10478560-10478579 | MS.gene70346:intron | 45.0% | |
| GTATACATCACCGCCGAATT+TGG | - | chr4.2:10476825-10476844 | MS.gene70346:intron | 45.0% | |
| GTGGTTACGGAACCAACTTT+GGG | + | chr4.2:10476771-10476790 | None:intergenic | 45.0% | |
| GTTGCATACATTGTCTGTGC+AGG | - | chr4.2:10480298-10480317 | MS.gene70346:CDS | 45.0% | |
| GTTTGTGTACAGCACATTGC+GGG | + | chr4.2:10479083-10479102 | None:intergenic | 45.0% | |
| TAACAACTGCCATGCAGCAT+AGG | + | chr4.2:10480396-10480415 | None:intergenic | 45.0% | |
| TATCTATCCGATGTGGCACT+TGG | - | chr4.2:10478699-10478718 | MS.gene70346:intron | 45.0% | |
| TATGCTGCATGGCAGTTGTT+AGG | - | chr4.2:10480395-10480414 | MS.gene70346:intron | 45.0% | |
| TATTGTCAAAGCAGCAGCCA+AGG | + | chr4.2:10478915-10478934 | None:intergenic | 45.0% | |
| TCACTATCAGTAGGAGCCTT+TGG | + | chr4.2:10480177-10480196 | None:intergenic | 45.0% | |
| TCGACTGGATTGAGCATGAT+TGG | + | chr4.2:10476335-10476354 | None:intergenic | 45.0% | |
| TCTAACTGCAGAACCTTGTG+AGG | - | chr4.2:10476463-10476482 | MS.gene70346:intron | 45.0% | |
| TGGAAGCCCATCATCAGAAT+CGG | + | chr4.2:10480452-10480471 | None:intergenic | 45.0% | |
| ! | AAGGCTCCTACTGATAGTGA+AGG | - | chr4.2:10480177-10480196 | MS.gene70346:intron | 45.0% |
| ! | AGGATTTAGCTCCTCTAGAG+TGG | + | chr4.2:10476799-10476818 | None:intergenic | 45.0% |
| ! | CATATGGAGGAAGCCTTTTG+AGG | - | chr4.2:10477428-10477447 | MS.gene70346:intron | 45.0% |
| ! | GAGTCTTATCTATCCGATGC+GGG | - | chr4.2:10478486-10478505 | MS.gene70346:intron | 45.0% |
| ! | GGCTGTTGACACAGGATTTT+GGG | - | chr4.2:10476871-10476890 | MS.gene70346:intron | 45.0% |
| ! | GGGGTGTTATGGTATGAAGT+TGG | - | chr4.2:10480229-10480248 | MS.gene70346:intron | 45.0% |
| ! | TGTGATGCCAAAAAGTGCAC+CGG | - | chr4.2:10476897-10476916 | MS.gene70346:intron | 45.0% |
| ! | TTTTGCAGGGGGTGAATTGT+AGG | + | chr4.2:10478995-10479014 | None:intergenic | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr4.2:10478429-10478448 | MS.gene70346:intron | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr4.2:10478432-10478451 | None:intergenic | 45.0% |
| !! | GGATTTAGCTCCTCTAGAGT+GGG | + | chr4.2:10476798-10476817 | None:intergenic | 45.0% |
| !! | TGGCTGCTGCTTTGACAATA+TGG | - | chr4.2:10478915-10478934 | MS.gene70346:intron | 45.0% |
| !! | TTTGGGCTTGGTGCATGAAT+AGG | - | chr4.2:10478551-10478570 | MS.gene70346:intron | 45.0% |
| !!! | CGTGTGACTAATGGTTTTGG+GGG | - | chr4.2:10477841-10477860 | MS.gene70346:intron | 45.0% |
| AAGCCAAACCGCTGCAATAG+TGG | + | chr4.2:10478347-10478366 | None:intergenic | 50.0% | |
| AGGGGCTAATCAGGAGCTAA+TGG | + | chr4.2:10479792-10479811 | None:intergenic | 50.0% | |
| AGTATCGTGGTGCGACGTAT+TGG | + | chr4.2:10478732-10478751 | None:intergenic | 50.0% | |
| ATCTATCCGATGCGGGACTT+GGG | - | chr4.2:10478493-10478512 | MS.gene70346:intron | 50.0% | |
| ATGGGCTTCCACCTCTTGAA+AGG | - | chr4.2:10480461-10480480 | MS.gene70346:CDS | 50.0% | |
| CATGTCCGCTATTGACAACC+TGG | + | chr4.2:10478321-10478340 | None:intergenic | 50.0% | |
| CATGTTGCCTTGCCCTCAAA+AGG | + | chr4.2:10477444-10477463 | None:intergenic | 50.0% | |
| GAAAAACCCAAGTCCCGCAT+CGG | + | chr4.2:10478502-10478521 | None:intergenic | 50.0% | |
| GATTGAGGCAACCCTAAACG+AGG | + | chr4.2:10478794-10478813 | None:intergenic | 50.0% | |
| GCAATCCTCACCTTACAAGC+CGG | + | chr4.2:10478442-10478461 | None:intergenic | 50.0% | |
| GCGGTGATGTATACAGTGGT+AGG | + | chr4.2:10476819-10476838 | None:intergenic | 50.0% | |
| GCTATCTTGTGTAGAGGCCT+TGG | - | chr4.2:10478895-10478914 | MS.gene70346:intron | 50.0% | |
| GTACCACTATTGCAGCGGTT+TGG | - | chr4.2:10478341-10478360 | MS.gene70346:intron | 50.0% | |
| GTATCGTGGTGCGACGTATT+GGG | + | chr4.2:10478731-10478750 | None:intergenic | 50.0% | |
| TATCTATCCGATGCGGGACT+TGG | - | chr4.2:10478492-10478511 | MS.gene70346:intron | 50.0% | |
| TGTCATTGGGCTGTTGACAC+AGG | - | chr4.2:10476863-10476882 | MS.gene70346:intron | 50.0% | |
| TTCGGCGGTGATGTATACAG+TGG | + | chr4.2:10476823-10476842 | None:intergenic | 50.0% | |
| ! | GGGCTGTTGACACAGGATTT+TGG | - | chr4.2:10476870-10476889 | MS.gene70346:intron | 50.0% |
| ! | GTGATGCCAAAAAGTGCACC+GGG | - | chr4.2:10476898-10476917 | MS.gene70346:intron | 50.0% |
| ! | TGAGAGTTGGTTGTGTCGAC+TGG | + | chr4.2:10476350-10476369 | None:intergenic | 50.0% |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr4.2:10478434-10478453 | MS.gene70346:intron | 50.0% |
| !! | CACCAAGCCCAAAGAGTGTT+GGG | + | chr4.2:10478544-10478563 | None:intergenic | 50.0% |
| !! | CAGGTTGTCAATAGCGGACA+TGG | - | chr4.2:10478319-10478338 | MS.gene70346:intron | 50.0% |
| !! | CTCCTCTAGAGTGGGAATAG+TGG | + | chr4.2:10476790-10476809 | None:intergenic | 50.0% |
| !! | TATTGCAGCGGTTTGGCTTG+TGG | - | chr4.2:10478348-10478367 | MS.gene70346:intron | 50.0% |
| ACAAGCGCGTCAGGTTCCAA+AGG | - | chr4.2:10480158-10480177 | MS.gene70346:intron | 55.0% | |
| CAACTGCCATGCAGCATAGG+AGG | + | chr4.2:10480393-10480412 | None:intergenic | 55.0% | |
| CAGTCTTGAAAGCTTGCGCC+CGG | + | chr4.2:10476919-10476938 | None:intergenic | 55.0% | |
| CCTCACGCCCAACACTCTTT+GGG | - | chr4.2:10478534-10478553 | MS.gene70346:intron | 55.0% | |
| GCGCAGCGCAACTTCACAAA+AGG | + | chr4.2:10478211-10478230 | None:intergenic | 55.0% | |
| GGGCGCAAGCTTTCAAGACT+GGG | - | chr4.2:10476918-10476937 | MS.gene70346:intron | 55.0% | |
| TTGGCTATCACAAGCGCGTC+AGG | - | chr4.2:10480149-10480168 | MS.gene70346:intron | 55.0% | |
| ! | GCACCAAGCCCAAAGAGTGT+TGG | + | chr4.2:10478545-10478564 | None:intergenic | 55.0% |
| ! | GGCTGTTGTGGATTGCTCGT+GGG | - | chr4.2:10478168-10478187 | MS.gene70346:intron | 55.0% |
| ! | TGCAGTGCCATGGCTTGTAG+CGG | - | chr4.2:10478841-10478860 | MS.gene70346:intron | 55.0% |
| ! | TGGCTGTTGTGGATTGCTCG+TGG | - | chr4.2:10478167-10478186 | MS.gene70346:intron | 55.0% |
| !! | AAAGAGTGTTGGGCGTGAGG+GGG | + | chr4.2:10478534-10478553 | None:intergenic | 55.0% |
| !! | CAAAGAGTGTTGGGCGTGAG+GGG | + | chr4.2:10478535-10478554 | None:intergenic | 55.0% |
| !! | CCAAAGAGTGTTGGGCGTGA+GGG | + | chr4.2:10478536-10478555 | None:intergenic | 55.0% |
| !! | GAGGAAGCCTTTTGAGGGCA+AGG | - | chr4.2:10477434-10477453 | MS.gene70346:intron | 55.0% |
| CCCTCACGCCCAACACTCTT+TGG | - | chr4.2:10478533-10478552 | MS.gene70346:intron | 60.0% | |
| CGCCCAACACTCTTTGGGCT+TGG | - | chr4.2:10478539-10478558 | MS.gene70346:intron | 60.0% | |
| CGGGCGCAAGCTTTCAAGAC+TGG | - | chr4.2:10476917-10476936 | MS.gene70346:intron | 60.0% | |
| GGGTTTGCCGCTACAAGCCA+TGG | + | chr4.2:10478851-10478870 | None:intergenic | 60.0% | |
| ! | CTTGCGCCCGGTGCACTTTT+TGG | + | chr4.2:10476907-10476926 | None:intergenic | 60.0% |
| ! | GTCGACTGGCCGCTACTATC+TGG | - | chr4.2:10478370-10478389 | MS.gene70346:intron | 60.0% |
| !! | AAGAGTGTTGGGCGTGAGGG+GGG | + | chr4.2:10478533-10478552 | None:intergenic | 60.0% |
| !! | CCCAAAGAGTGTTGGGCGTG+AGG | + | chr4.2:10478537-10478556 | None:intergenic | 60.0% |
| !! | CGGTTTGGCTTGTGGTCGAC+TGG | - | chr4.2:10478356-10478375 | MS.gene70346:intron | 60.0% |
| ! | GGGCGTGAGGGGGGTGTATT+GGG | + | chr4.2:10478524-10478543 | None:intergenic | 65.0% |
| ! | TGGGCGTGAGGGGGGTGTAT+TGG | + | chr4.2:10478525-10478544 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 10476289 | 10480531 | 10476289 | ID=MS.gene70346 |
| chr4.2 | mRNA | 10476289 | 10480531 | 10476289 | ID=MS.gene70346.t1;Parent=MS.gene70346 |
| chr4.2 | exon | 10480420 | 10480531 | 10480420 | ID=MS.gene70346.t1.exon1;Parent=MS.gene70346.t1 |
| chr4.2 | CDS | 10480420 | 10480531 | 10480420 | ID=cds.MS.gene70346.t1;Parent=MS.gene70346.t1 |
| chr4.2 | exon | 10480279 | 10480346 | 10480279 | ID=MS.gene70346.t1.exon2;Parent=MS.gene70346.t1 |
| chr4.2 | CDS | 10480279 | 10480346 | 10480279 | ID=cds.MS.gene70346.t1;Parent=MS.gene70346.t1 |
| chr4.2 | exon | 10479870 | 10479935 | 10479870 | ID=MS.gene70346.t1.exon3;Parent=MS.gene70346.t1 |
| chr4.2 | CDS | 10479870 | 10479935 | 10479870 | ID=cds.MS.gene70346.t1;Parent=MS.gene70346.t1 |
| chr4.2 | exon | 10478945 | 10478985 | 10478945 | ID=MS.gene70346.t1.exon4;Parent=MS.gene70346.t1 |
| chr4.2 | CDS | 10478945 | 10478985 | 10478945 | ID=cds.MS.gene70346.t1;Parent=MS.gene70346.t1 |
| chr4.2 | exon | 10478576 | 10478712 | 10478576 | ID=MS.gene70346.t1.exon5;Parent=MS.gene70346.t1 |
| chr4.2 | CDS | 10478576 | 10478712 | 10478576 | ID=cds.MS.gene70346.t1;Parent=MS.gene70346.t1 |
| chr4.2 | exon | 10477884 | 10477974 | 10477884 | ID=MS.gene70346.t1.exon6;Parent=MS.gene70346.t1 |
| chr4.2 | CDS | 10477884 | 10477974 | 10477884 | ID=cds.MS.gene70346.t1;Parent=MS.gene70346.t1 |
| chr4.2 | exon | 10477467 | 10477538 | 10477467 | ID=MS.gene70346.t1.exon7;Parent=MS.gene70346.t1 |
| chr4.2 | CDS | 10477467 | 10477538 | 10477467 | ID=cds.MS.gene70346.t1;Parent=MS.gene70346.t1 |
| chr4.2 | exon | 10476622 | 10476734 | 10476622 | ID=MS.gene70346.t1.exon8;Parent=MS.gene70346.t1 |
| chr4.2 | CDS | 10476622 | 10476734 | 10476622 | ID=cds.MS.gene70346.t1;Parent=MS.gene70346.t1 |
| chr4.2 | exon | 10476289 | 10476410 | 10476289 | ID=MS.gene70346.t1.exon9;Parent=MS.gene70346.t1 |
| chr4.2 | CDS | 10476289 | 10476410 | 10476289 | ID=cds.MS.gene70346.t1;Parent=MS.gene70346.t1 |
| Gene Sequence |
| Protein sequence |
