Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71470.t1 | XP_003628628.1 | 95.4 | 329 | 15 | 0 | 1 | 329 | 1 | 329 | 1.40E-177 | 632.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71470.t1 | Q9FJR1 | 57.5 | 322 | 129 | 3 | 10 | 327 | 16 | 333 | 4.5e-103 | 375.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71470.t1 | G7LEQ9 | 95.4 | 329 | 15 | 0 | 1 | 329 | 1 | 329 | 1.0e-177 | 632.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene71470 | MS.gene35931 | PPI |
| MS.gene71470 | MS.gene80170 | PPI |
| MS.gene87222 | MS.gene71470 | PPI |
| MS.gene71470 | MS.gene014924 | PPI |
| MS.gene71470 | MS.gene35853 | PPI |
| MS.gene71470 | MS.gene029047 | PPI |
| MS.gene71470 | MS.gene027436 | PPI |
| MS.gene51331 | MS.gene71470 | PPI |
| MS.gene71470 | MS.gene35795 | PPI |
| MS.gene71470 | MS.gene32715 | PPI |
| MS.gene71470 | MS.gene071108 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71470.t1 | MTR_8g062780 | 95.441 | 329 | 15 | 0 | 1 | 329 | 1 | 329 | 0.0 | 650 |
| MS.gene71470.t1 | MTR_1g090760 | 53.776 | 331 | 148 | 2 | 3 | 328 | 4 | 334 | 2.30e-134 | 385 |
| MS.gene71470.t1 | MTR_0286s0010 | 53.896 | 308 | 139 | 2 | 18 | 324 | 29 | 334 | 5.07e-125 | 362 |
| MS.gene71470.t1 | MTR_6g008075 | 53.896 | 308 | 139 | 2 | 18 | 324 | 29 | 334 | 5.07e-125 | 362 |
| MS.gene71470.t1 | MTR_7g029030 | 45.079 | 315 | 167 | 3 | 10 | 324 | 12 | 320 | 1.04e-95 | 286 |
| MS.gene71470.t1 | MTR_5g016010 | 44.720 | 322 | 174 | 3 | 1 | 320 | 6 | 325 | 9.68e-94 | 282 |
| MS.gene71470.t1 | MTR_4g095450 | 44.586 | 314 | 165 | 4 | 13 | 323 | 16 | 323 | 1.37e-89 | 271 |
| MS.gene71470.t1 | MTR_1g009750 | 43.791 | 306 | 168 | 3 | 21 | 324 | 25 | 328 | 8.88e-88 | 266 |
| MS.gene71470.t1 | MTR_4g127670 | 43.522 | 301 | 164 | 3 | 22 | 320 | 23 | 319 | 3.68e-84 | 257 |
| MS.gene71470.t1 | MTR_4g087965 | 41.956 | 317 | 175 | 4 | 12 | 320 | 27 | 342 | 4.21e-84 | 258 |
| MS.gene71470.t1 | MTR_1g101830 | 41.066 | 319 | 180 | 5 | 8 | 324 | 10 | 322 | 5.49e-81 | 249 |
| MS.gene71470.t1 | MTR_1g009750 | 40.823 | 316 | 169 | 5 | 10 | 324 | 13 | 311 | 3.32e-77 | 239 |
| MS.gene71470.t1 | MTR_4g046713 | 38.486 | 317 | 190 | 4 | 10 | 324 | 13 | 326 | 2.58e-75 | 234 |
| MS.gene71470.t1 | MTR_7g107520 | 40.728 | 302 | 173 | 4 | 23 | 324 | 25 | 320 | 1.01e-74 | 233 |
| MS.gene71470.t1 | MTR_4g122640 | 42.020 | 307 | 173 | 4 | 19 | 324 | 34 | 336 | 2.62e-74 | 232 |
| MS.gene71470.t1 | MTR_1g077000 | 42.140 | 299 | 160 | 5 | 26 | 324 | 42 | 327 | 1.15e-73 | 230 |
| MS.gene71470.t1 | MTR_5g021060 | 41.118 | 304 | 176 | 3 | 23 | 325 | 30 | 331 | 1.42e-73 | 230 |
| MS.gene71470.t1 | MTR_5g022870 | 40.645 | 310 | 168 | 6 | 19 | 324 | 19 | 316 | 1.05e-72 | 228 |
| MS.gene71470.t1 | MTR_1g025980 | 41.447 | 304 | 165 | 7 | 21 | 321 | 22 | 315 | 7.33e-72 | 225 |
| MS.gene71470.t1 | MTR_0155s0040 | 39.677 | 310 | 168 | 5 | 18 | 324 | 22 | 315 | 4.21e-71 | 223 |
| MS.gene71470.t1 | MTR_8g076820 | 39.308 | 318 | 189 | 4 | 8 | 324 | 16 | 330 | 2.07e-70 | 222 |
| MS.gene71470.t1 | MTR_8g075100 | 39.216 | 306 | 178 | 5 | 19 | 324 | 22 | 319 | 2.64e-70 | 221 |
| MS.gene71470.t1 | MTR_2g008710 | 39.506 | 324 | 180 | 6 | 10 | 324 | 9 | 325 | 4.55e-70 | 221 |
| MS.gene71470.t1 | MTR_4g114210 | 40.938 | 320 | 177 | 5 | 10 | 324 | 8 | 320 | 6.15e-69 | 218 |
| MS.gene71470.t1 | MTR_2g088770 | 36.478 | 318 | 195 | 6 | 10 | 325 | 14 | 326 | 8.44e-69 | 218 |
| MS.gene71470.t1 | MTR_2g029830 | 39.103 | 312 | 182 | 4 | 21 | 328 | 26 | 333 | 1.34e-68 | 218 |
| MS.gene71470.t1 | MTR_2g029815 | 38.199 | 322 | 190 | 5 | 7 | 324 | 14 | 330 | 1.62e-68 | 218 |
| MS.gene71470.t1 | MTR_2g029560 | 35.962 | 317 | 199 | 3 | 10 | 324 | 11 | 325 | 2.62e-68 | 217 |
| MS.gene71470.t1 | MTR_2g029820 | 38.264 | 311 | 184 | 4 | 19 | 325 | 25 | 331 | 3.62e-68 | 217 |
| MS.gene71470.t1 | MTR_4g132490 | 37.097 | 310 | 190 | 3 | 16 | 324 | 22 | 327 | 1.33e-67 | 215 |
| MS.gene71470.t1 | MTR_7g093370 | 38.006 | 321 | 194 | 4 | 7 | 324 | 53 | 371 | 2.87e-67 | 215 |
| MS.gene71470.t1 | MTR_2g040000 | 40.453 | 309 | 175 | 5 | 22 | 325 | 28 | 332 | 4.61e-67 | 214 |
| MS.gene71470.t1 | MTR_4g125940 | 39.806 | 309 | 178 | 4 | 20 | 324 | 25 | 329 | 5.28e-67 | 213 |
| MS.gene71470.t1 | MTR_2g029800 | 36.977 | 311 | 188 | 4 | 19 | 325 | 25 | 331 | 2.64e-66 | 212 |
| MS.gene71470.t1 | MTR_2g029730 | 36.278 | 317 | 198 | 3 | 10 | 324 | 12 | 326 | 3.11e-66 | 212 |
| MS.gene71470.t1 | MTR_3g092990 | 39.216 | 306 | 185 | 1 | 20 | 325 | 23 | 327 | 3.30e-66 | 211 |
| MS.gene71470.t1 | MTR_2g029860 | 35.802 | 324 | 194 | 5 | 11 | 324 | 11 | 330 | 3.73e-66 | 212 |
| MS.gene71470.t1 | MTR_2g029850 | 37.097 | 310 | 187 | 4 | 19 | 324 | 25 | 330 | 1.26e-65 | 211 |
| MS.gene71470.t1 | MTR_7g072510 | 38.050 | 318 | 187 | 4 | 7 | 324 | 5 | 312 | 1.82e-65 | 209 |
| MS.gene71470.t1 | MTR_2g084090 | 36.677 | 319 | 190 | 4 | 10 | 324 | 8 | 318 | 4.87e-65 | 208 |
| MS.gene71470.t1 | MTR_1g054205 | 37.736 | 318 | 193 | 4 | 10 | 324 | 11 | 326 | 7.62e-65 | 208 |
| MS.gene71470.t1 | MTR_3g072190 | 37.908 | 306 | 181 | 3 | 19 | 324 | 22 | 318 | 9.19e-65 | 207 |
| MS.gene71470.t1 | MTR_6g043460 | 36.877 | 301 | 179 | 4 | 26 | 325 | 39 | 329 | 1.02e-64 | 208 |
| MS.gene71470.t1 | MTR_2g028980 | 36.810 | 326 | 197 | 6 | 3 | 324 | 10 | 330 | 1.83e-64 | 207 |
| MS.gene71470.t1 | MTR_4g132110 | 38.487 | 304 | 178 | 3 | 23 | 324 | 32 | 328 | 2.42e-64 | 207 |
| MS.gene71470.t1 | MTR_3g094650 | 36.825 | 315 | 188 | 5 | 10 | 320 | 11 | 318 | 2.55e-64 | 206 |
| MS.gene71470.t1 | MTR_7g086820 | 37.500 | 312 | 186 | 4 | 16 | 327 | 13 | 315 | 3.07e-64 | 206 |
| MS.gene71470.t1 | MTR_1g038680 | 37.874 | 301 | 183 | 3 | 27 | 324 | 33 | 332 | 3.38e-64 | 206 |
| MS.gene71470.t1 | MTR_7g072480 | 38.390 | 323 | 188 | 4 | 2 | 324 | 5 | 316 | 3.75e-64 | 206 |
| MS.gene71470.t1 | MTR_6g027440 | 36.449 | 321 | 196 | 4 | 4 | 324 | 2 | 314 | 4.46e-64 | 206 |
| MS.gene71470.t1 | MTR_5g014100 | 37.580 | 314 | 176 | 5 | 23 | 324 | 26 | 331 | 4.57e-64 | 206 |
| MS.gene71470.t1 | MTR_5g017850 | 37.342 | 316 | 195 | 3 | 10 | 324 | 13 | 326 | 6.90e-64 | 205 |
| MS.gene71470.t1 | MTR_2g084080 | 36.792 | 318 | 191 | 5 | 7 | 324 | 10 | 317 | 8.38e-64 | 205 |
| MS.gene71470.t1 | MTR_2g029750 | 37.621 | 311 | 184 | 5 | 19 | 324 | 25 | 330 | 2.78e-63 | 204 |
| MS.gene71470.t1 | MTR_7g086870 | 38.462 | 299 | 172 | 4 | 27 | 325 | 26 | 312 | 2.82e-63 | 203 |
| MS.gene71470.t1 | MTR_4g133800 | 39.535 | 301 | 171 | 6 | 27 | 326 | 45 | 335 | 3.52e-63 | 204 |
| MS.gene71470.t1 | MTR_4g030890 | 38.111 | 307 | 185 | 4 | 19 | 325 | 96 | 397 | 3.61e-63 | 206 |
| MS.gene71470.t1 | MTR_1g086320 | 38.944 | 303 | 177 | 4 | 27 | 324 | 34 | 333 | 5.64e-63 | 203 |
| MS.gene71470.t1 | MTR_4g029170 | 37.846 | 325 | 190 | 6 | 3 | 324 | 6 | 321 | 5.98e-63 | 202 |
| MS.gene71470.t1 | MTR_4g029190 | 40.193 | 311 | 178 | 5 | 15 | 324 | 37 | 340 | 8.36e-63 | 203 |
| MS.gene71470.t1 | MTR_2g084110 | 36.808 | 307 | 183 | 5 | 19 | 324 | 21 | 317 | 1.50e-62 | 201 |
| MS.gene71470.t1 | MTR_4g031140 | 36.452 | 310 | 186 | 4 | 18 | 324 | 23 | 324 | 1.68e-62 | 202 |
| MS.gene71470.t1 | MTR_2g029910 | 35.737 | 319 | 197 | 4 | 13 | 326 | 19 | 334 | 3.15e-62 | 202 |
| MS.gene71470.t1 | MTR_1g086490 | 38.511 | 309 | 177 | 4 | 27 | 324 | 34 | 340 | 7.94e-62 | 200 |
| MS.gene71470.t1 | MTR_4g132110 | 37.864 | 309 | 178 | 4 | 23 | 324 | 32 | 333 | 9.01e-62 | 200 |
| MS.gene71470.t1 | MTR_5g083860 | 35.962 | 317 | 196 | 4 | 8 | 324 | 16 | 325 | 6.38e-61 | 197 |
| MS.gene71470.t1 | MTR_5g017860 | 35.127 | 316 | 202 | 3 | 10 | 324 | 13 | 326 | 7.63e-61 | 197 |
| MS.gene71470.t1 | MTR_4g083710 | 37.500 | 320 | 190 | 5 | 8 | 324 | 12 | 324 | 9.64e-61 | 197 |
| MS.gene71470.t1 | MTR_5g074970 | 37.654 | 324 | 184 | 6 | 10 | 324 | 12 | 326 | 1.12e-60 | 197 |
| MS.gene71470.t1 | MTR_1g066380 | 38.235 | 306 | 180 | 3 | 21 | 324 | 25 | 323 | 1.64e-60 | 196 |
| MS.gene71470.t1 | MTR_1g066640 | 38.111 | 307 | 181 | 3 | 20 | 324 | 24 | 323 | 2.39e-60 | 196 |
| MS.gene71470.t1 | MTR_4g125940 | 42.066 | 271 | 149 | 4 | 58 | 324 | 8 | 274 | 4.09e-60 | 194 |
| MS.gene71470.t1 | MTR_1g066710 | 38.436 | 307 | 180 | 3 | 20 | 324 | 24 | 323 | 4.60e-60 | 195 |
| MS.gene71470.t1 | MTR_2g437770 | 36.877 | 301 | 176 | 7 | 26 | 324 | 53 | 341 | 2.11e-59 | 194 |
| MS.gene71470.t1 | MTR_3g467600 | 37.037 | 324 | 188 | 7 | 8 | 324 | 10 | 324 | 4.31e-59 | 193 |
| MS.gene71470.t1 | MTR_2g029740 | 35.806 | 310 | 191 | 4 | 19 | 324 | 25 | 330 | 5.53e-59 | 193 |
| MS.gene71470.t1 | MTR_5g074760 | 38.462 | 325 | 182 | 7 | 8 | 324 | 7 | 321 | 9.89e-59 | 192 |
| MS.gene71470.t1 | MTR_1g115900 | 37.195 | 328 | 188 | 7 | 5 | 324 | 4 | 321 | 1.08e-58 | 192 |
| MS.gene71470.t1 | MTR_3g092990 | 38.033 | 305 | 177 | 2 | 20 | 324 | 23 | 315 | 1.25e-58 | 191 |
| MS.gene71470.t1 | MTR_3g466180 | 38.486 | 317 | 186 | 3 | 8 | 324 | 16 | 323 | 2.07e-58 | 191 |
| MS.gene71470.t1 | MTR_5g049280 | 33.441 | 311 | 200 | 5 | 19 | 324 | 29 | 337 | 2.54e-58 | 191 |
| MS.gene71470.t1 | MTR_5g074860 | 36.420 | 324 | 185 | 9 | 7 | 320 | 9 | 321 | 2.69e-58 | 191 |
| MS.gene71470.t1 | MTR_2g084010 | 35.647 | 317 | 193 | 6 | 10 | 324 | 11 | 318 | 3.71e-58 | 190 |
| MS.gene71470.t1 | MTR_7g026990 | 37.793 | 299 | 174 | 5 | 27 | 324 | 35 | 322 | 3.74e-58 | 190 |
| MS.gene71470.t1 | MTR_6g043240 | 35.906 | 298 | 179 | 4 | 27 | 324 | 46 | 331 | 4.63e-58 | 191 |
| MS.gene71470.t1 | MTR_3g466200 | 35.913 | 323 | 195 | 5 | 5 | 324 | 7 | 320 | 5.23e-58 | 190 |
| MS.gene71470.t1 | MTR_5g033470 | 35.621 | 306 | 184 | 6 | 27 | 324 | 77 | 377 | 6.91e-58 | 191 |
| MS.gene71470.t1 | MTR_4g029180 | 36.877 | 301 | 179 | 5 | 26 | 324 | 30 | 321 | 7.18e-58 | 189 |
| MS.gene71470.t1 | MTR_5g074740 | 38.226 | 327 | 184 | 7 | 8 | 326 | 7 | 323 | 9.82e-58 | 189 |
| MS.gene71470.t1 | MTR_2g084020 | 34.853 | 307 | 190 | 5 | 19 | 324 | 21 | 318 | 2.06e-57 | 188 |
| MS.gene71470.t1 | MTR_2g029830 | 40.769 | 260 | 146 | 4 | 69 | 324 | 6 | 261 | 3.49e-57 | 187 |
| MS.gene71470.t1 | MTR_4g029200 | 38.158 | 304 | 179 | 3 | 21 | 324 | 44 | 338 | 3.58e-57 | 188 |
| MS.gene71470.t1 | MTR_3g094670 | 36.278 | 317 | 187 | 6 | 10 | 320 | 11 | 318 | 4.38e-57 | 187 |
| MS.gene71470.t1 | MTR_6g043280 | 35.452 | 299 | 183 | 4 | 26 | 324 | 44 | 332 | 5.10e-57 | 188 |
| MS.gene71470.t1 | MTR_2g084000 | 33.019 | 318 | 203 | 4 | 8 | 324 | 11 | 319 | 8.82e-57 | 187 |
| MS.gene71470.t1 | MTR_4g074995 | 36.164 | 318 | 184 | 4 | 8 | 324 | 9 | 308 | 1.64e-56 | 186 |
| MS.gene71470.t1 | MTR_1g022970 | 38.361 | 305 | 182 | 5 | 23 | 324 | 46 | 347 | 5.55e-56 | 186 |
| MS.gene71470.t1 | MTR_2g067440 | 34.954 | 329 | 182 | 5 | 21 | 320 | 58 | 383 | 8.36e-56 | 186 |
| MS.gene71470.t1 | MTR_2g008730 | 36.755 | 302 | 156 | 5 | 27 | 324 | 31 | 301 | 8.62e-56 | 184 |
| MS.gene71470.t1 | MTR_2g077990 | 35.650 | 331 | 180 | 6 | 21 | 320 | 74 | 402 | 1.10e-55 | 186 |
| MS.gene71470.t1 | MTR_2g078610 | 35.650 | 331 | 180 | 6 | 21 | 320 | 74 | 402 | 1.21e-55 | 186 |
| MS.gene71470.t1 | MTR_1g066680 | 37.540 | 309 | 179 | 5 | 20 | 324 | 24 | 322 | 2.79e-55 | 183 |
| MS.gene71470.t1 | MTR_5g074710 | 36.760 | 321 | 187 | 7 | 11 | 326 | 14 | 323 | 3.12e-55 | 183 |
| MS.gene71470.t1 | MTR_3g094630 | 36.808 | 307 | 183 | 5 | 20 | 324 | 25 | 322 | 1.78e-54 | 181 |
| MS.gene71470.t1 | MTR_3g105790 | 35.430 | 302 | 185 | 4 | 26 | 324 | 28 | 322 | 1.17e-53 | 179 |
| MS.gene71470.t1 | MTR_4g074990 | 34.862 | 327 | 188 | 6 | 1 | 324 | 1 | 305 | 1.61e-53 | 178 |
| MS.gene71470.t1 | MTR_3g072190 | 38.224 | 259 | 151 | 3 | 66 | 324 | 2 | 251 | 2.27e-53 | 176 |
| MS.gene71470.t1 | MTR_0147s0010 | 36.306 | 314 | 166 | 5 | 26 | 320 | 80 | 378 | 9.91e-53 | 178 |
| MS.gene71470.t1 | MTR_2g078280 | 35.737 | 319 | 172 | 6 | 21 | 308 | 74 | 390 | 1.07e-52 | 178 |
| MS.gene71470.t1 | MTR_2g008160 | 36.013 | 311 | 187 | 7 | 19 | 324 | 20 | 323 | 2.49e-52 | 175 |
| MS.gene71470.t1 | MTR_2g099175 | 34.069 | 317 | 193 | 7 | 14 | 324 | 29 | 335 | 8.90e-52 | 174 |
| MS.gene71470.t1 | MTR_4g074980 | 33.553 | 304 | 170 | 5 | 21 | 324 | 23 | 294 | 4.79e-46 | 158 |
| MS.gene71470.t1 | MTR_1g066380 | 36.965 | 257 | 153 | 3 | 70 | 324 | 6 | 255 | 8.10e-46 | 156 |
| MS.gene71470.t1 | MTR_4g074980 | 37.288 | 236 | 143 | 4 | 21 | 256 | 23 | 253 | 1.16e-45 | 156 |
| MS.gene71470.t1 | MTR_2g067450 | 35.294 | 306 | 184 | 7 | 21 | 320 | 9 | 306 | 1.87e-45 | 157 |
| MS.gene71470.t1 | MTR_3g105790 | 36.522 | 230 | 141 | 3 | 98 | 324 | 19 | 246 | 1.48e-39 | 140 |
| MS.gene71470.t1 | MTR_2g008160 | 32.154 | 311 | 164 | 7 | 19 | 324 | 20 | 288 | 1.80e-39 | 140 |
| MS.gene71470.t1 | MTR_5g074700 | 36.364 | 231 | 123 | 5 | 99 | 326 | 7 | 216 | 1.44e-36 | 131 |
| MS.gene71470.t1 | MTR_5g074860 | 30.247 | 324 | 166 | 8 | 7 | 320 | 9 | 282 | 1.09e-35 | 130 |
| MS.gene71470.t1 | MTR_2g008160 | 38.674 | 181 | 106 | 3 | 19 | 199 | 20 | 195 | 1.48e-33 | 123 |
| MS.gene71470.t1 | MTR_3g072210 | 36.269 | 193 | 113 | 4 | 134 | 324 | 54 | 238 | 7.62e-32 | 119 |
| MS.gene71470.t1 | MTR_2g029880 | 34.359 | 195 | 111 | 5 | 136 | 326 | 9 | 190 | 1.82e-29 | 112 |
| MS.gene71470.t1 | MTR_7g072490 | 32.766 | 235 | 95 | 5 | 69 | 303 | 2 | 173 | 4.33e-26 | 103 |
| MS.gene71470.t1 | MTR_2g078560 | 28.767 | 219 | 126 | 3 | 132 | 320 | 98 | 316 | 1.64e-23 | 99.0 |
| MS.gene71470.t1 | MTR_5g058120 | 33.529 | 170 | 99 | 3 | 161 | 329 | 8 | 164 | 3.73e-23 | 96.7 |
| MS.gene71470.t1 | MTR_7g086790 | 35.583 | 163 | 84 | 3 | 70 | 232 | 17 | 158 | 2.71e-22 | 92.8 |
| MS.gene71470.t1 | MTR_3g072260 | 45.133 | 113 | 61 | 1 | 20 | 132 | 23 | 134 | 3.06e-22 | 91.3 |
| MS.gene71470.t1 | MTR_3g107060 | 28.975 | 283 | 121 | 10 | 38 | 303 | 91 | 310 | 1.94e-20 | 90.5 |
| MS.gene71470.t1 | MTR_1g089005 | 40.000 | 130 | 69 | 3 | 13 | 135 | 4 | 131 | 1.10e-17 | 79.3 |
| MS.gene71470.t1 | MTR_6g048160 | 53.425 | 73 | 29 | 2 | 62 | 134 | 22 | 89 | 1.31e-15 | 71.6 |
| MS.gene71470.t1 | MTR_4g031040 | 32.593 | 135 | 63 | 3 | 134 | 263 | 25 | 136 | 9.41e-14 | 67.8 |
| MS.gene71470.t1 | MTR_4g114220 | 48.148 | 81 | 31 | 2 | 51 | 131 | 31 | 100 | 9.97e-14 | 67.8 |
| MS.gene71470.t1 | MTR_1g098320 | 43.590 | 78 | 44 | 0 | 247 | 324 | 47 | 124 | 6.60e-13 | 65.5 |
| MS.gene71470.t1 | MTR_4g012865 | 38.095 | 63 | 39 | 0 | 26 | 88 | 80 | 142 | 2.46e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71470.t1 | AT5G40150 | 60.000 | 305 | 117 | 2 | 20 | 324 | 29 | 328 | 2.27e-135 | 387 |
| MS.gene71470.t1 | AT5G47000 | 57.453 | 322 | 129 | 3 | 10 | 327 | 16 | 333 | 2.30e-135 | 388 |
| MS.gene71470.t1 | AT3G28200 | 57.705 | 305 | 123 | 1 | 20 | 324 | 18 | 316 | 2.04e-131 | 377 |
| MS.gene71470.t1 | AT4G17690 | 57.190 | 306 | 126 | 1 | 23 | 328 | 26 | 326 | 2.42e-130 | 375 |
| MS.gene71470.t1 | AT1G24110 | 55.346 | 318 | 138 | 3 | 10 | 325 | 8 | 323 | 1.20e-124 | 360 |
| MS.gene71470.t1 | AT5G14130 | 45.741 | 317 | 165 | 3 | 10 | 324 | 19 | 330 | 6.49e-94 | 282 |
| MS.gene71470.t1 | AT5G14130 | 45.741 | 317 | 165 | 3 | 10 | 324 | 60 | 371 | 1.87e-93 | 283 |
| MS.gene71470.t1 | AT4G37520 | 44.118 | 306 | 168 | 2 | 21 | 324 | 25 | 329 | 2.94e-92 | 278 |
| MS.gene71470.t1 | AT4G37530 | 43.871 | 310 | 169 | 3 | 18 | 324 | 22 | 329 | 1.60e-91 | 276 |
| MS.gene71470.t1 | AT4G37520 | 43.791 | 306 | 166 | 3 | 21 | 324 | 25 | 326 | 6.67e-90 | 272 |
| MS.gene71470.t1 | AT5G67400 | 43.849 | 317 | 174 | 3 | 11 | 324 | 14 | 329 | 7.33e-89 | 270 |
| MS.gene71470.t1 | AT3G49960 | 42.857 | 315 | 176 | 3 | 13 | 324 | 16 | 329 | 1.39e-84 | 258 |
| MS.gene71470.t1 | AT2G18980 | 42.484 | 306 | 169 | 3 | 21 | 324 | 23 | 323 | 2.93e-83 | 255 |
| MS.gene71470.t1 | AT4G30170 | 42.157 | 306 | 170 | 3 | 21 | 324 | 25 | 325 | 2.17e-82 | 253 |
| MS.gene71470.t1 | AT4G37530 | 44.487 | 263 | 141 | 3 | 18 | 277 | 22 | 282 | 2.89e-77 | 238 |
| MS.gene71470.t1 | AT3G50990 | 40.432 | 324 | 185 | 6 | 7 | 325 | 22 | 342 | 2.87e-75 | 235 |
| MS.gene71470.t1 | AT2G34060 | 39.355 | 310 | 185 | 2 | 17 | 323 | 36 | 345 | 3.01e-75 | 235 |
| MS.gene71470.t1 | AT4G36430 | 39.672 | 305 | 181 | 3 | 22 | 325 | 29 | 331 | 5.87e-74 | 231 |
| MS.gene71470.t1 | AT5G51890 | 39.873 | 316 | 183 | 4 | 4 | 317 | 5 | 315 | 8.04e-74 | 231 |
| MS.gene71470.t1 | AT4G33420 | 40.625 | 320 | 177 | 5 | 5 | 324 | 19 | 325 | 8.24e-74 | 231 |
| MS.gene71470.t1 | AT4G33420 | 40.625 | 320 | 177 | 5 | 5 | 324 | 66 | 372 | 2.94e-73 | 231 |
| MS.gene71470.t1 | AT2G18150 | 39.088 | 307 | 184 | 3 | 20 | 325 | 33 | 337 | 4.83e-73 | 229 |
| MS.gene71470.t1 | AT5G66390 | 40.461 | 304 | 178 | 3 | 23 | 325 | 33 | 334 | 6.29e-73 | 229 |
| MS.gene71470.t1 | AT5G17820 | 38.387 | 310 | 179 | 4 | 15 | 324 | 16 | 313 | 1.79e-72 | 227 |
| MS.gene71470.t1 | AT5G17820 | 38.095 | 315 | 183 | 4 | 10 | 324 | 64 | 366 | 1.66e-71 | 226 |
| MS.gene71470.t1 | AT2G18140 | 38.264 | 311 | 189 | 3 | 16 | 325 | 28 | 336 | 5.24e-71 | 224 |
| MS.gene71470.t1 | AT4G31760 | 40.063 | 317 | 182 | 4 | 10 | 324 | 16 | 326 | 1.15e-70 | 223 |
| MS.gene71470.t1 | AT1G05260 | 37.578 | 322 | 187 | 6 | 10 | 325 | 13 | 326 | 1.45e-70 | 223 |
| MS.gene71470.t1 | AT2G24800 | 40.777 | 309 | 160 | 6 | 26 | 324 | 34 | 329 | 1.07e-69 | 220 |
| MS.gene71470.t1 | AT5G42180 | 37.700 | 313 | 186 | 5 | 10 | 320 | 8 | 313 | 2.07e-69 | 219 |
| MS.gene71470.t1 | AT3G21770 | 39.032 | 310 | 183 | 5 | 13 | 320 | 19 | 324 | 2.18e-69 | 219 |
| MS.gene71470.t1 | AT2G38380 | 38.585 | 311 | 182 | 5 | 19 | 324 | 27 | 333 | 7.39e-69 | 219 |
| MS.gene71470.t1 | AT4G08770 | 38.782 | 312 | 185 | 4 | 18 | 325 | 19 | 328 | 7.98e-69 | 219 |
| MS.gene71470.t1 | AT4G33870 | 37.092 | 337 | 176 | 2 | 18 | 320 | 63 | 397 | 2.14e-68 | 219 |
| MS.gene71470.t1 | AT5G06730 | 36.741 | 313 | 194 | 3 | 14 | 324 | 24 | 334 | 3.74e-68 | 217 |
| MS.gene71470.t1 | AT4G16270 | 40.940 | 298 | 171 | 4 | 28 | 324 | 55 | 348 | 6.54e-68 | 216 |
| MS.gene71470.t1 | AT4G08780 | 38.141 | 312 | 187 | 4 | 18 | 325 | 19 | 328 | 6.59e-68 | 216 |
| MS.gene71470.t1 | AT1G71695 | 37.654 | 324 | 183 | 4 | 13 | 324 | 23 | 339 | 8.48e-68 | 216 |
| MS.gene71470.t1 | AT5G06720 | 36.422 | 313 | 195 | 3 | 14 | 324 | 23 | 333 | 3.93e-67 | 214 |
| MS.gene71470.t1 | AT4G11290 | 35.962 | 317 | 199 | 3 | 10 | 324 | 12 | 326 | 1.23e-66 | 212 |
| MS.gene71470.t1 | AT2G38390 | 37.621 | 311 | 185 | 5 | 19 | 324 | 27 | 333 | 2.45e-66 | 212 |
| MS.gene71470.t1 | AT5G05340 | 37.217 | 309 | 183 | 4 | 18 | 324 | 25 | 324 | 3.10e-66 | 211 |
| MS.gene71470.t1 | AT3G32980 | 37.117 | 326 | 198 | 5 | 5 | 325 | 12 | 335 | 3.37e-66 | 212 |
| MS.gene71470.t1 | AT3G03670 | 36.278 | 317 | 195 | 3 | 10 | 324 | 10 | 321 | 5.20e-66 | 211 |
| MS.gene71470.t1 | AT1G05240 | 39.933 | 298 | 171 | 4 | 26 | 320 | 29 | 321 | 1.38e-65 | 209 |
| MS.gene71470.t1 | AT1G05250 | 39.933 | 298 | 171 | 4 | 26 | 320 | 29 | 321 | 1.38e-65 | 209 |
| MS.gene71470.t1 | AT5G15180 | 36.164 | 318 | 195 | 5 | 10 | 324 | 17 | 329 | 2.62e-65 | 209 |
| MS.gene71470.t1 | AT2G35380 | 38.720 | 328 | 186 | 7 | 10 | 324 | 10 | 335 | 3.45e-65 | 209 |
| MS.gene71470.t1 | AT2G41480 | 39.875 | 321 | 180 | 6 | 10 | 324 | 15 | 328 | 3.84e-65 | 209 |
| MS.gene71470.t1 | AT1G68850 | 38.264 | 311 | 178 | 8 | 23 | 324 | 30 | 335 | 5.03e-65 | 209 |
| MS.gene71470.t1 | AT3G49120 | 36.196 | 326 | 201 | 5 | 5 | 325 | 13 | 336 | 1.51e-64 | 208 |
| MS.gene71470.t1 | AT3G01190 | 37.855 | 317 | 188 | 7 | 10 | 324 | 12 | 321 | 1.98e-64 | 206 |
| MS.gene71470.t1 | AT1G14550 | 38.511 | 309 | 180 | 5 | 18 | 324 | 21 | 321 | 2.38e-64 | 206 |
| MS.gene71470.t1 | AT1G44970 | 38.235 | 306 | 185 | 3 | 21 | 324 | 43 | 346 | 1.20e-63 | 205 |
| MS.gene71470.t1 | AT3G49110 | 36.991 | 319 | 194 | 5 | 12 | 325 | 21 | 337 | 1.31e-63 | 205 |
| MS.gene71470.t1 | AT4G21960 | 37.171 | 304 | 182 | 3 | 23 | 324 | 31 | 327 | 3.00e-63 | 204 |
| MS.gene71470.t1 | AT5G64120 | 36.893 | 309 | 183 | 7 | 17 | 324 | 31 | 328 | 4.18e-63 | 203 |
| MS.gene71470.t1 | AT5G19890 | 37.299 | 311 | 183 | 6 | 19 | 325 | 26 | 328 | 8.23e-63 | 202 |
| MS.gene71470.t1 | AT2G37130 | 39.172 | 314 | 181 | 4 | 14 | 324 | 21 | 327 | 9.61e-63 | 202 |
| MS.gene71470.t1 | AT1G30870 | 38.095 | 315 | 181 | 7 | 14 | 325 | 43 | 346 | 1.09e-62 | 203 |
| MS.gene71470.t1 | AT2G22420 | 36.482 | 307 | 190 | 4 | 18 | 324 | 18 | 319 | 3.01e-62 | 201 |
| MS.gene71470.t1 | AT1G49570 | 37.748 | 302 | 185 | 2 | 21 | 320 | 46 | 346 | 5.55e-62 | 201 |
| MS.gene71470.t1 | AT2G37130 | 39.735 | 302 | 172 | 4 | 26 | 324 | 2 | 296 | 9.17e-62 | 199 |
| MS.gene71470.t1 | AT1G14540 | 34.810 | 316 | 197 | 4 | 10 | 324 | 8 | 315 | 3.62e-61 | 198 |
| MS.gene71470.t1 | AT4G26010 | 34.472 | 322 | 194 | 7 | 5 | 325 | 5 | 310 | 1.07e-60 | 196 |
| MS.gene71470.t1 | AT3G17070 | 36.634 | 303 | 178 | 6 | 26 | 321 | 41 | 336 | 1.81e-60 | 197 |
| MS.gene71470.t1 | AT4G26010 | 34.472 | 322 | 194 | 7 | 5 | 325 | 33 | 338 | 1.94e-60 | 197 |
| MS.gene71470.t1 | AT1G34510 | 36.050 | 319 | 187 | 7 | 8 | 325 | 8 | 310 | 8.07e-60 | 194 |
| MS.gene71470.t1 | AT5G64110 | 37.829 | 304 | 172 | 6 | 27 | 324 | 38 | 330 | 9.67e-60 | 195 |
| MS.gene71470.t1 | AT5G19880 | 35.604 | 323 | 195 | 6 | 13 | 324 | 9 | 329 | 3.52e-59 | 193 |
| MS.gene71470.t1 | AT2G39040 | 36.977 | 311 | 187 | 6 | 20 | 324 | 43 | 350 | 6.88e-57 | 188 |
| MS.gene71470.t1 | AT5G58400 | 35.463 | 313 | 192 | 5 | 10 | 320 | 17 | 321 | 7.16e-57 | 187 |
| MS.gene71470.t1 | AT5G58390 | 33.754 | 317 | 198 | 5 | 7 | 320 | 5 | 312 | 9.68e-55 | 181 |
| MS.gene71470.t1 | AT4G25980 | 35.423 | 319 | 187 | 7 | 15 | 324 | 18 | 326 | 1.65e-54 | 181 |
| MS.gene71470.t1 | AT1G77100 | 36.656 | 311 | 181 | 8 | 19 | 324 | 20 | 319 | 2.63e-54 | 180 |
| MS.gene71470.t1 | AT5G39580 | 34.969 | 326 | 193 | 9 | 1 | 324 | 11 | 319 | 9.60e-54 | 179 |
| MS.gene71470.t1 | AT5G24070 | 34.727 | 311 | 186 | 6 | 22 | 324 | 34 | 335 | 2.18e-52 | 176 |
| MS.gene71470.t1 | AT5G64100 | 33.663 | 303 | 186 | 6 | 26 | 324 | 40 | 331 | 9.12e-52 | 174 |
| MS.gene71470.t1 | AT2G43480 | 33.033 | 333 | 189 | 9 | 13 | 324 | 16 | 335 | 8.97e-49 | 166 |
| MS.gene71470.t1 | AT2G35380 | 39.676 | 247 | 141 | 6 | 84 | 324 | 3 | 247 | 2.47e-48 | 162 |
| MS.gene71470.t1 | AT3G17070 | 35.842 | 279 | 164 | 7 | 50 | 321 | 3 | 273 | 2.39e-47 | 161 |
| MS.gene71470.t1 | AT5G22410 | 34.868 | 304 | 185 | 8 | 27 | 325 | 32 | 327 | 1.14e-46 | 161 |
| MS.gene71470.t1 | AT2G24800 | 43.902 | 164 | 87 | 2 | 26 | 189 | 34 | 192 | 8.81e-37 | 132 |
| MS.gene71470.t1 | AT5G39580 | 35.354 | 198 | 114 | 5 | 1 | 198 | 11 | 194 | 2.86e-29 | 112 |
| MS.gene71470.t1 | AT4G25980 | 36.957 | 184 | 103 | 5 | 16 | 195 | 64 | 238 | 3.83e-29 | 113 |
| MS.gene71470.t1 | AT4G32320 | 29.861 | 288 | 118 | 9 | 33 | 303 | 99 | 319 | 6.32e-21 | 92.0 |
| MS.gene71470.t1 | AT3G42570 | 37.634 | 93 | 57 | 1 | 100 | 191 | 57 | 149 | 1.63e-14 | 70.5 |
| MS.gene71470.t1 | AT4G08390 | 27.778 | 198 | 112 | 4 | 117 | 306 | 185 | 359 | 1.74e-13 | 70.9 |
| MS.gene71470.t1 | AT4G08390 | 27.778 | 198 | 112 | 4 | 117 | 306 | 186 | 360 | 1.92e-13 | 70.9 |
| MS.gene71470.t1 | AT4G08390 | 27.778 | 198 | 112 | 4 | 117 | 306 | 186 | 360 | 1.92e-13 | 70.9 |
| MS.gene71470.t1 | AT4G08390 | 27.778 | 198 | 112 | 4 | 117 | 306 | 186 | 360 | 1.92e-13 | 70.9 |
Find 71 sgRNAs with CRISPR-Local
Find 90 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATGATGTCTTCAAATTT+AGG | 0.179444 | 8.4:-38149018 | None:intergenic |
| ATGAGTTTCGATTGTGTAAT+TGG | 0.201616 | 8.4:-38148970 | None:intergenic |
| GCATACTCTGGATTATATTT+AGG | 0.231124 | 8.4:-38149849 | None:intergenic |
| CGATTGTGTAATTGGAAATA+AGG | 0.248579 | 8.4:-38148962 | None:intergenic |
| CTCTGCCTTGTTGAAGGAAT+TGG | 0.278354 | 8.4:-38149154 | None:intergenic |
| AAATAAGGCTAGGCAGAATA+AGG | 0.306649 | 8.4:-38148947 | None:intergenic |
| CAAATTTAGGACATGAGTTT+TGG | 0.311815 | 8.4:-38149005 | None:intergenic |
| GAAGAGAGGAATGGGACTTT+TGG | 0.327984 | 8.4:+38149980 | MS.gene71470:CDS |
| CGTGACCTTGTTGTCATTGT+TGG | 0.359384 | 8.4:+38149303 | MS.gene71470:CDS |
| CAAGAGATGGTGGCTCTAAC+AGG | 0.366286 | 8.4:+38149747 | MS.gene71470:CDS |
| TTCTTCAGCGATTGCATGGT+TGG | 0.397734 | 8.4:+38149102 | MS.gene71470:CDS |
| ACGAAAATCCTCAAAGAACT+TGG | 0.405925 | 8.4:-38150072 | None:intergenic |
| AAGAATTTGAAGAGAGGAAT+GGG | 0.407936 | 8.4:+38149972 | MS.gene71470:CDS |
| TTTGGCTACGGATAGTTTGA+TGG | 0.413246 | 8.4:+38149998 | MS.gene71470:CDS |
| AAATCAAACCAAGTTCTTTG+AGG | 0.414406 | 8.4:+38150064 | MS.gene71470:CDS |
| CTAACAGGTGCACACACAAT+AGG | 0.419024 | 8.4:+38149762 | MS.gene71470:CDS |
| CAAGAATTTGAAGAGAGGAA+TGG | 0.430899 | 8.4:+38149971 | MS.gene71470:CDS |
| TGAAGGAATTGGAGGATACT+AGG | 0.436422 | 8.4:-38149143 | None:intergenic |
| ACTGCAAACAGTTTAGTAAC+AGG | 0.436437 | 8.4:+38149793 | MS.gene71470:CDS |
| TTAAGCCCTGCAGCATACTC+TGG | 0.440829 | 8.4:-38149861 | None:intergenic |
| CATATTAAGGAGGGGAAGGA+TGG | 0.448934 | 8.4:+38150122 | MS.gene71470:CDS |
| CCTCTTCTTCAGCGATTGCA+TGG | 0.449760 | 8.4:+38149098 | MS.gene71470:CDS |
| AGTGCAGCGCCAGCAGTTGA+AGG | 0.453823 | 8.4:-38149072 | None:intergenic |
| AATAAGGCTAGGCAGAATAA+GGG | 0.461742 | 8.4:-38148946 | None:intergenic |
| GACATCAACCTCTCCCTCTC+AGG | 0.462357 | 8.4:+38149186 | MS.gene71470:CDS |
| ATCACGCTCTGCCTTGTTGA+AGG | 0.475369 | 8.4:-38149160 | None:intergenic |
| CAAGAGGACAAAACCATTTG+TGG | 0.479493 | 8.4:+38150028 | MS.gene71470:CDS |
| GCCAACCATGACCATGTCTC+AGG | 0.480069 | 8.4:+38149407 | MS.gene71470:CDS |
| TGCCTTGTTGAAGGAATTGG+AGG | 0.483730 | 8.4:-38149151 | None:intergenic |
| TCAGCATACATATCCACAAA+TGG | 0.490986 | 8.4:-38150041 | None:intergenic |
| TATAATCCAGAGTATGCTGC+AGG | 0.492335 | 8.4:+38149855 | MS.gene71470:CDS |
| AAAACAACACCTTCAACTGC+TGG | 0.501829 | 8.4:+38149063 | MS.gene71470:CDS |
| TTCAGCGATTGCATGGTTGG+AGG | 0.503281 | 8.4:+38149105 | MS.gene71470:CDS |
| AACCATCTCCTGAGAGGGAG+AGG | 0.503505 | 8.4:-38149194 | None:intergenic |
| TTTGCATATTAAGGAGGGGA+AGG | 0.504509 | 8.4:+38150118 | MS.gene71470:CDS |
| CACGTCGTTGAACGCTGACA+TGG | 0.507162 | 8.4:-38149916 | None:intergenic |
| AGCAAAGAACATGTTGGAGC+TGG | 0.508896 | 8.4:+38149233 | MS.gene71470:CDS |
| CCAAGGTCTAACTCGTAAGA+TGG | 0.511014 | 8.4:-38149330 | None:intergenic |
| GACCTTGTTGTCATTGTTGG+TGG | 0.518560 | 8.4:+38149306 | MS.gene71470:CDS |
| AACCTCTCCCTCTCAGGAGA+TGG | 0.518611 | 8.4:+38149192 | MS.gene71470:CDS |
| ACCTGAGACATGGTCATGGT+TGG | 0.519828 | 8.4:-38149408 | None:intergenic |
| TCAGCACAAGAGACCACACC+GGG | 0.536779 | 8.4:-38149261 | None:intergenic |
| TTGGCTACGGATAGTTTGAT+GGG | 0.544626 | 8.4:+38149999 | MS.gene71470:CDS |
| CCATCTTACGAGTTAGACCT+TGG | 0.545376 | 8.4:+38149330 | MS.gene71470:CDS |
| CCATGCAATCGCTGAAGAAG+AGG | 0.548520 | 8.4:-38149098 | None:intergenic |
| AACAAGGTCACGTGCAGCTG+CGG | 0.559854 | 8.4:-38149292 | None:intergenic |
| TACGGATAGTTTGATGGGTG+AGG | 0.562512 | 8.4:+38150004 | MS.gene71470:CDS |
| GTTTGATGGGTGAGGACAAG+AGG | 0.573583 | 8.4:+38150012 | MS.gene71470:CDS |
| AGGGTTTACAGTTCAAGAGA+TGG | 0.577701 | 8.4:+38149734 | MS.gene71470:CDS |
| CTAAACTGTCTCTTCGACCA+AGG | 0.580683 | 8.4:-38149347 | None:intergenic |
| GACATGGTCATGGTTGGCAA+CGG | 0.587229 | 8.4:-38149402 | None:intergenic |
| GTGTAATTGGAAATAAGGCT+AGG | 0.590377 | 8.4:-38148957 | None:intergenic |
| ATCAAAACCATCTCCTGAGA+GGG | 0.598540 | 8.4:-38149199 | None:intergenic |
| TCGTTGAACGCTGACATGGA+AGG | 0.606868 | 8.4:-38149912 | None:intergenic |
| CACACGAGCAAAGAACATGT+TGG | 0.609530 | 8.4:+38149227 | MS.gene71470:CDS |
| TGCAATCGCTGAAGAAGAGG+CGG | 0.617338 | 8.4:-38149095 | None:intergenic |
| TACATGTTATCAAACTTGCT+AGG | 0.621324 | 8.4:-38149945 | None:intergenic |
| ATATTTAGGATCAGTTTCAG+TGG | 0.624806 | 8.4:-38149835 | None:intergenic |
| GTTTACAGTTCAAGAGATGG+TGG | 0.625008 | 8.4:+38149737 | MS.gene71470:CDS |
| TGAGAGGGAGAGGTTGATGT+CGG | 0.634718 | 8.4:-38149184 | None:intergenic |
| TATTTCAAGAATTTGAAGAG+AGG | 0.634886 | 8.4:+38149966 | MS.gene71470:CDS |
| CATCAAAACCATCTCCTGAG+AGG | 0.653088 | 8.4:-38149200 | None:intergenic |
| ATAAGGCTAGGCAGAATAAG+GGG | 0.660626 | 8.4:-38148945 | None:intergenic |
| AGGATGGAGAGATACGACAT+AGG | 0.662838 | 8.4:+38150138 | MS.gene71470:CDS |
| ATCCTCCAATTCCTTCAACA+AGG | 0.665150 | 8.4:+38149149 | MS.gene71470:CDS |
| ATAATCCAGAGTATGCTGCA+GGG | 0.674221 | 8.4:+38149856 | MS.gene71470:CDS |
| GGAGCTGGAATGCCCCGGTG+TGG | 0.680967 | 8.4:+38149248 | MS.gene71470:CDS |
| GACCACCAACAATGACAACA+AGG | 0.684955 | 8.4:-38149308 | None:intergenic |
| ATGTTGGAGCTGGAATGCCC+CGG | 0.689095 | 8.4:+38149243 | MS.gene71470:CDS |
| GTCAGCACAAGAGACCACAC+CGG | 0.698599 | 8.4:-38149262 | None:intergenic |
| CAGCACAAGAGACCACACCG+GGG | 0.844878 | 8.4:-38149260 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTGTGAATTTTGTAATA+CGG | + | chr8.4:38149593-38149612 | MS.gene71470:intron | 15.0% |
| ! | TATTTCAAGAATTTGAAGAG+AGG | + | chr8.4:38149966-38149985 | MS.gene71470:CDS | 25.0% |
| !! | ATAGACATTTTCACTTCAAA+AGG | + | chr8.4:38149714-38149733 | MS.gene71470:CDS | 25.0% |
| !! | TAGACATTTTCACTTCAAAA+GGG | + | chr8.4:38149715-38149734 | MS.gene71470:CDS | 25.0% |
| !!! | AAGGATCTTTTTGGTAATTT+TGG | - | chr8.4:38149896-38149915 | None:intergenic | 25.0% |
| !!! | TTGATGATGTCTTCAAATTT+AGG | - | chr8.4:38149021-38149040 | None:intergenic | 25.0% |
| AAATCAAACCAAGTTCTTTG+AGG | + | chr8.4:38150064-38150083 | MS.gene71470:CDS | 30.0% | |
| AAGAATTTGAAGAGAGGAAT+GGG | + | chr8.4:38149972-38149991 | MS.gene71470:CDS | 30.0% | |
| ATGAGTTTCGATTGTGTAAT+TGG | - | chr8.4:38148973-38148992 | None:intergenic | 30.0% | |
| CGATTGTGTAATTGGAAATA+AGG | - | chr8.4:38148965-38148984 | None:intergenic | 30.0% | |
| GCATACTCTGGATTATATTT+AGG | - | chr8.4:38149852-38149871 | None:intergenic | 30.0% | |
| TGTCAACAATTCAATGTAGA+AGG | - | chr8.4:38149662-38149681 | None:intergenic | 30.0% | |
| ! | AGTGTTTTGCATATTAAGGA+GGG | + | chr8.4:38150113-38150132 | MS.gene71470:CDS | 30.0% |
| ! | ATATTTAGGATCAGTTTCAG+TGG | - | chr8.4:38149838-38149857 | None:intergenic | 30.0% |
| ! | ATGTAGAAGGATGAAGTATT+TGG | - | chr8.4:38149649-38149668 | None:intergenic | 30.0% |
| ! | GCTTAGTGTTTTGCATATTA+AGG | + | chr8.4:38150109-38150128 | MS.gene71470:CDS | 30.0% |
| ! | TACATGTTATCAAACTTGCT+AGG | - | chr8.4:38149948-38149967 | None:intergenic | 30.0% |
| ! | TAGTGTTTTGCATATTAAGG+AGG | + | chr8.4:38150112-38150131 | MS.gene71470:CDS | 30.0% |
| !! | CAAATTTAGGACATGAGTTT+TGG | - | chr8.4:38149008-38149027 | None:intergenic | 30.0% |
| !!! | TTGTTTTTTTACCTGAGACA+TGG | - | chr8.4:38149421-38149440 | None:intergenic | 30.0% |
| AAATAAGGCTAGGCAGAATA+AGG | - | chr8.4:38148950-38148969 | None:intergenic | 35.0% | |
| AATAAGGCTAGGCAGAATAA+GGG | - | chr8.4:38148949-38148968 | None:intergenic | 35.0% | |
| ACGAAAATCCTCAAAGAACT+TGG | - | chr8.4:38150075-38150094 | None:intergenic | 35.0% | |
| ACTGCAAACAGTTTAGTAAC+AGG | + | chr8.4:38149793-38149812 | MS.gene71470:CDS | 35.0% | |
| CAAGAATTTGAAGAGAGGAA+TGG | + | chr8.4:38149971-38149990 | MS.gene71470:CDS | 35.0% | |
| GTGTAATTGGAAATAAGGCT+AGG | - | chr8.4:38148960-38148979 | None:intergenic | 35.0% | |
| TCAGCATACATATCCACAAA+TGG | - | chr8.4:38150044-38150063 | None:intergenic | 35.0% | |
| ! | GTGTTTTGCATATTAAGGAG+GGG | + | chr8.4:38150114-38150133 | MS.gene71470:CDS | 35.0% |
| !! | CATGAGTTTTGGTAGTAGTT+TGG | - | chr8.4:38148997-38149016 | None:intergenic | 35.0% |
| AAAACAACACCTTCAACTGC+TGG | + | chr8.4:38149063-38149082 | MS.gene71470:CDS | 40.0% | |
| AGGGTTTACAGTTCAAGAGA+TGG | + | chr8.4:38149734-38149753 | MS.gene71470:CDS | 40.0% | |
| ATAAGGCTAGGCAGAATAAG+GGG | - | chr8.4:38148948-38148967 | None:intergenic | 40.0% | |
| ATAATCCAGAGTATGCTGCA+GGG | + | chr8.4:38149856-38149875 | MS.gene71470:CDS | 40.0% | |
| ATCAAAACCATCTCCTGAGA+GGG | - | chr8.4:38149202-38149221 | None:intergenic | 40.0% | |
| ATCCTCCAATTCCTTCAACA+AGG | + | chr8.4:38149149-38149168 | MS.gene71470:CDS | 40.0% | |
| CAAGAGGACAAAACCATTTG+TGG | + | chr8.4:38150028-38150047 | MS.gene71470:CDS | 40.0% | |
| GTTTACAGTTCAAGAGATGG+TGG | + | chr8.4:38149737-38149756 | MS.gene71470:CDS | 40.0% | |
| TATAATCCAGAGTATGCTGC+AGG | + | chr8.4:38149855-38149874 | MS.gene71470:CDS | 40.0% | |
| TGAAGGAATTGGAGGATACT+AGG | - | chr8.4:38149146-38149165 | None:intergenic | 40.0% | |
| TTGGCTACGGATAGTTTGAT+GGG | + | chr8.4:38149999-38150018 | MS.gene71470:CDS | 40.0% | |
| TTTATGTGACCATGCATGCT+AGG | + | chr8.4:38149689-38149708 | MS.gene71470:intron | 40.0% | |
| TTTGCATATTAAGGAGGGGA+AGG | + | chr8.4:38150118-38150137 | MS.gene71470:CDS | 40.0% | |
| TTTGGCTACGGATAGTTTGA+TGG | + | chr8.4:38149998-38150017 | MS.gene71470:CDS | 40.0% | |
| ! | CTGACATGGAAGGATCTTTT+TGG | - | chr8.4:38149905-38149924 | None:intergenic | 40.0% |
| ! | TGTTTTCTGCTTGTCTGTGA+CGG | - | chr8.4:38149049-38149068 | None:intergenic | 40.0% |
| ! | TTTTACCTGAGACATGGTCA+TGG | - | chr8.4:38149415-38149434 | None:intergenic | 40.0% |
| !!! | GTTTTCTGCGTCGATTGATT+TGG | - | chr8.4:38149376-38149395 | None:intergenic | 40.0% |
| AGCAAAGAACATGTTGGAGC+TGG | + | chr8.4:38149233-38149252 | MS.gene71470:CDS | 45.0% | |
| AGGATGGAGAGATACGACAT+AGG | + | chr8.4:38150138-38150157 | MS.gene71470:CDS | 45.0% | |
| CACACGAGCAAAGAACATGT+TGG | + | chr8.4:38149227-38149246 | MS.gene71470:CDS | 45.0% | |
| CATATTAAGGAGGGGAAGGA+TGG | + | chr8.4:38150122-38150141 | MS.gene71470:CDS | 45.0% | |
| CATCAAAACCATCTCCTGAG+AGG | - | chr8.4:38149203-38149222 | None:intergenic | 45.0% | |
| CCAAGGTCTAACTCGTAAGA+TGG | - | chr8.4:38149333-38149352 | None:intergenic | 45.0% | |
| CCATCTTACGAGTTAGACCT+TGG | + | chr8.4:38149330-38149349 | MS.gene71470:CDS | 45.0% | |
| CTAAACTGTCTCTTCGACCA+AGG | - | chr8.4:38149350-38149369 | None:intergenic | 45.0% | |
| CTAACAGGTGCACACACAAT+AGG | + | chr8.4:38149762-38149781 | MS.gene71470:CDS | 45.0% | |
| GACCACCAACAATGACAACA+AGG | - | chr8.4:38149311-38149330 | None:intergenic | 45.0% | |
| TGTCTATCACCTAGCATGCA+TGG | - | chr8.4:38149701-38149720 | None:intergenic | 45.0% | |
| TTCTTCAGCGATTGCATGGT+TGG | + | chr8.4:38149102-38149121 | MS.gene71470:CDS | 45.0% | |
| ! | CGTGACCTTGTTGTCATTGT+TGG | + | chr8.4:38149303-38149322 | MS.gene71470:CDS | 45.0% |
| ! | CTCTGCCTTGTTGAAGGAAT+TGG | - | chr8.4:38149157-38149176 | None:intergenic | 45.0% |
| ! | GAAGAGAGGAATGGGACTTT+TGG | + | chr8.4:38149980-38149999 | MS.gene71470:CDS | 45.0% |
| ! | GACCTTGTTGTCATTGTTGG+TGG | + | chr8.4:38149306-38149325 | MS.gene71470:CDS | 45.0% |
| ! | TACGGATAGTTTGATGGGTG+AGG | + | chr8.4:38150004-38150023 | MS.gene71470:CDS | 45.0% |
| ! | TGCCTTGTTGAAGGAATTGG+AGG | - | chr8.4:38149154-38149173 | None:intergenic | 45.0% |
| !! | AGGAATGGGACTTTTGGCTA+CGG | + | chr8.4:38149986-38150005 | MS.gene71470:CDS | 45.0% |
| ACCTGAGACATGGTCATGGT+TGG | - | chr8.4:38149411-38149430 | None:intergenic | 50.0% | |
| CCATGCAATCGCTGAAGAAG+AGG | - | chr8.4:38149101-38149120 | None:intergenic | 50.0% | |
| CCTCTTCTTCAGCGATTGCA+TGG | + | chr8.4:38149098-38149117 | MS.gene71470:CDS | 50.0% | |
| GACATGGTCATGGTTGGCAA+CGG | - | chr8.4:38149405-38149424 | None:intergenic | 50.0% | |
| TCGTTGAACGCTGACATGGA+AGG | - | chr8.4:38149915-38149934 | None:intergenic | 50.0% | |
| TGCAATCGCTGAAGAAGAGG+CGG | - | chr8.4:38149098-38149117 | None:intergenic | 50.0% | |
| TTAAGCCCTGCAGCATACTC+TGG | - | chr8.4:38149864-38149883 | None:intergenic | 50.0% | |
| TTCAGCGATTGCATGGTTGG+AGG | + | chr8.4:38149105-38149124 | MS.gene71470:CDS | 50.0% | |
| ! | ATCACGCTCTGCCTTGTTGA+AGG | - | chr8.4:38149163-38149182 | None:intergenic | 50.0% |
| ! | GTTTGATGGGTGAGGACAAG+AGG | + | chr8.4:38150012-38150031 | MS.gene71470:CDS | 50.0% |
| !! | CAAGAGATGGTGGCTCTAAC+AGG | + | chr8.4:38149747-38149766 | MS.gene71470:CDS | 50.0% |
| !! | TGAGAGGGAGAGGTTGATGT+CGG | - | chr8.4:38149187-38149206 | None:intergenic | 50.0% |
| AACAAGGTCACGTGCAGCTG+CGG | - | chr8.4:38149295-38149314 | None:intergenic | 55.0% | |
| AACCATCTCCTGAGAGGGAG+AGG | - | chr8.4:38149197-38149216 | None:intergenic | 55.0% | |
| AACCTCTCCCTCTCAGGAGA+TGG | + | chr8.4:38149192-38149211 | MS.gene71470:CDS | 55.0% | |
| ATGTTGGAGCTGGAATGCCC+CGG | + | chr8.4:38149243-38149262 | MS.gene71470:CDS | 55.0% | |
| CACGTCGTTGAACGCTGACA+TGG | - | chr8.4:38149919-38149938 | None:intergenic | 55.0% | |
| GACATCAACCTCTCCCTCTC+AGG | + | chr8.4:38149186-38149205 | MS.gene71470:CDS | 55.0% | |
| GCCAACCATGACCATGTCTC+AGG | + | chr8.4:38149407-38149426 | MS.gene71470:CDS | 55.0% | |
| GTCAGCACAAGAGACCACAC+CGG | - | chr8.4:38149265-38149284 | None:intergenic | 55.0% | |
| TCAGCACAAGAGACCACACC+GGG | - | chr8.4:38149264-38149283 | None:intergenic | 55.0% | |
| AGTGCAGCGCCAGCAGTTGA+AGG | - | chr8.4:38149075-38149094 | None:intergenic | 60.0% | |
| CAGCACAAGAGACCACACCG+GGG | - | chr8.4:38149263-38149282 | None:intergenic | 60.0% | |
| GGAGCTGGAATGCCCCGGTG+TGG | + | chr8.4:38149248-38149267 | MS.gene71470:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 38148922 | 38150193 | 38148922 | ID=MS.gene71470 |
| chr8.4 | mRNA | 38148922 | 38150193 | 38148922 | ID=MS.gene71470.t1;Parent=MS.gene71470 |
| chr8.4 | exon | 38148922 | 38149428 | 38148922 | ID=MS.gene71470.t1.exon1;Parent=MS.gene71470.t1 |
| chr8.4 | CDS | 38148922 | 38149428 | 38148922 | ID=cds.MS.gene71470.t1;Parent=MS.gene71470.t1 |
| chr8.4 | exon | 38149711 | 38150193 | 38149711 | ID=MS.gene71470.t1.exon2;Parent=MS.gene71470.t1 |
| chr8.4 | CDS | 38149711 | 38150193 | 38149711 | ID=cds.MS.gene71470.t1;Parent=MS.gene71470.t1 |
| Gene Sequence |
| Protein sequence |
