Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72904.t1 | XP_003612703.1 | 98.2 | 839 | 15 | 0 | 1 | 839 | 1 | 839 | 0.00E+00 | 1606.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72904.t1 | Q9C516 | 71.9 | 860 | 202 | 11 | 4 | 839 | 5 | 848 | 0.0e+00 | 1156.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72904.t1 | G7K9K2 | 98.2 | 839 | 15 | 0 | 1 | 839 | 1 | 839 | 0.0e+00 | 1606.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049255 | MS.gene72904 | 0.82258 | 2.20E-53 | -1.69E-46 |
| MS.gene050277 | MS.gene72904 | 0.82513 | 5.54E-54 | -1.69E-46 |
| MS.gene050303 | MS.gene72904 | 0.806512 | 7.94E-50 | -1.69E-46 |
| MS.gene050807 | MS.gene72904 | 0.802652 | 5.07E-49 | -1.69E-46 |
| MS.gene051241 | MS.gene72904 | 0.802049 | 6.74E-49 | -1.69E-46 |
| MS.gene051328 | MS.gene72904 | 0.818641 | 1.76E-52 | -1.69E-46 |
| MS.gene05134 | MS.gene72904 | 0.806991 | 6.29E-50 | -1.69E-46 |
| MS.gene052947 | MS.gene72904 | 0.823312 | 1.48E-53 | -1.69E-46 |
| MS.gene055162 | MS.gene72904 | 0.820109 | 8.16E-53 | -1.69E-46 |
| MS.gene055808 | MS.gene72904 | 0.807799 | 4.24E-50 | -1.69E-46 |
| MS.gene055912 | MS.gene72904 | 0.80436 | 2.24E-49 | -1.69E-46 |
| MS.gene056601 | MS.gene72904 | 0.808256 | 3.39E-50 | -1.69E-46 |
| MS.gene057234 | MS.gene72904 | 0.805588 | 1.24E-49 | -1.69E-46 |
| MS.gene057705 | MS.gene72904 | 0.847588 | 1.05E-59 | -1.69E-46 |
| MS.gene058055 | MS.gene72904 | 0.81735 | 3.45E-52 | -1.69E-46 |
| MS.gene05978 | MS.gene72904 | 0.811095 | 8.31E-51 | -1.69E-46 |
| MS.gene060429 | MS.gene72904 | 0.833997 | 3.87E-56 | -1.69E-46 |
| MS.gene060587 | MS.gene72904 | 0.818294 | 2.11E-52 | -1.69E-46 |
| MS.gene060917 | MS.gene72904 | 0.828356 | 9.41E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene041157 | MS.gene72904 | PPI |
| MS.gene047695 | MS.gene72904 | PPI |
| MS.gene010419 | MS.gene72904 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72904.t1 | MTR_5g027970 | 98.331 | 839 | 14 | 0 | 1 | 839 | 1 | 839 | 0.0 | 1721 |
| MS.gene72904.t1 | MTR_5g027970 | 98.639 | 588 | 8 | 0 | 1 | 588 | 1 | 588 | 0.0 | 1207 |
| MS.gene72904.t1 | MTR_6g071360 | 57.435 | 881 | 319 | 18 | 2 | 839 | 11 | 878 | 0.0 | 1003 |
| MS.gene72904.t1 | MTR_5g018510 | 52.624 | 705 | 307 | 11 | 127 | 815 | 194 | 887 | 0.0 | 720 |
| MS.gene72904.t1 | MTR_5g018510 | 52.482 | 705 | 309 | 10 | 127 | 815 | 194 | 888 | 0.0 | 719 |
| MS.gene72904.t1 | MTR_8g079010 | 54.021 | 659 | 277 | 9 | 171 | 815 | 118 | 764 | 0.0 | 698 |
| MS.gene72904.t1 | MTR_1g034300 | 48.851 | 653 | 311 | 8 | 171 | 813 | 209 | 848 | 0.0 | 608 |
| MS.gene72904.t1 | MTR_1g034300 | 48.851 | 653 | 310 | 8 | 171 | 813 | 209 | 847 | 0.0 | 605 |
| MS.gene72904.t1 | MTR_1g015750 | 32.405 | 395 | 205 | 14 | 422 | 810 | 36 | 374 | 6.73e-52 | 186 |
| MS.gene72904.t1 | MTR_1g015750 | 32.405 | 395 | 205 | 14 | 422 | 810 | 44 | 382 | 1.10e-51 | 186 |
| MS.gene72904.t1 | MTR_1g015750 | 31.987 | 297 | 148 | 10 | 422 | 717 | 36 | 279 | 1.99e-34 | 133 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72904.t1 | AT1G31930 | 67.865 | 862 | 233 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1150 |
| MS.gene72904.t1 | AT1G31930 | 67.865 | 862 | 233 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1150 |
| MS.gene72904.t1 | AT1G31930 | 67.865 | 862 | 233 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1150 |
| MS.gene72904.t1 | AT1G31930 | 67.865 | 862 | 233 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1150 |
| MS.gene72904.t1 | AT1G31930 | 67.865 | 862 | 233 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1150 |
| MS.gene72904.t1 | AT1G31930 | 67.865 | 862 | 233 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1150 |
| MS.gene72904.t1 | AT2G23460 | 50.338 | 739 | 334 | 12 | 96 | 815 | 144 | 868 | 0.0 | 704 |
| MS.gene72904.t1 | AT4G34390 | 45.507 | 690 | 327 | 16 | 161 | 833 | 204 | 861 | 0.0 | 552 |
| MS.gene72904.t1 | AT4G34390 | 43.043 | 690 | 305 | 16 | 161 | 833 | 204 | 822 | 2.57e-166 | 503 |
| MS.gene72904.t1 | AT2G26300 | 31.159 | 414 | 218 | 14 | 408 | 810 | 16 | 373 | 1.00e-51 | 186 |
| MS.gene72904.t1 | AT2G26300 | 31.159 | 414 | 218 | 14 | 408 | 810 | 16 | 373 | 1.00e-51 | 186 |
Find 217 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTCAGAAGCTTCTTCTTCT+TGG | 0.179208 | 5.1:-18974570 | MS.gene72904:CDS |
| TGCTTTGAATCATCTTGTTT+TGG | 0.199485 | 5.1:+18972605 | None:intergenic |
| GAATCCAAGCGTCTGAAATT+AGG | 0.205731 | 5.1:-18975787 | MS.gene72904:CDS |
| AGAAAATAAGAGTTTGTTAT+AGG | 0.213096 | 5.1:-18975948 | MS.gene72904:CDS |
| TTGTTAAGAACTAGTATTAA+AGG | 0.230147 | 5.1:+18972535 | None:intergenic |
| TTGCCGATGTCTCGTATTTC+CGG | 0.238304 | 5.1:-18976252 | MS.gene72904:CDS |
| ACAAAGATATGGATCATAAT+AGG | 0.252815 | 5.1:-18976452 | None:intergenic |
| ACATAAAAGAGGTTCTTAAA+TGG | 0.262325 | 5.1:-18972282 | MS.gene72904:CDS |
| TCGACAGCTTCGGAATATTT+AGG | 0.266925 | 5.1:-18976348 | MS.gene72904:CDS |
| GGGAAATGGTTTGGCTTTCA+TGG | 0.284339 | 5.1:-18972965 | MS.gene72904:CDS |
| AGTTCAAACTTGAATTTCTC+TGG | 0.305993 | 5.1:-18975136 | MS.gene72904:CDS |
| CTGTATAAGCTTCGAACTTT+GGG | 0.314678 | 5.1:+18972920 | None:intergenic |
| CTAAACCCGGATCTTTCTTC+TGG | 0.316664 | 5.1:-18976162 | MS.gene72904:CDS |
| AGGTTCTCCTGCTCACATTA+TGG | 0.317177 | 5.1:-18974160 | MS.gene72904:CDS |
| GTCCACGTGATACTCACTTT+TGG | 0.317550 | 5.1:-18974858 | MS.gene72904:CDS |
| CTTCTTCTTCTTGGAATTCA+AGG | 0.319947 | 5.1:-18974561 | MS.gene72904:CDS |
| CTTCTTGGAATTCAAGGGTC+TGG | 0.324531 | 5.1:-18974555 | MS.gene72904:CDS |
| ACGACAAAGAATCTGGTCTA+TGG | 0.324545 | 5.1:-18975564 | MS.gene72904:CDS |
| GCCTTCAGCTTCACCGGCTT+CGG | 0.330535 | 5.1:-18976136 | MS.gene72904:CDS |
| CAAAGATATGGATCATAATA+GGG | 0.331376 | 5.1:-18976451 | None:intergenic |
| AGAATATAAGAGGAAACATT+TGG | 0.337123 | 5.1:-18974798 | MS.gene72904:CDS |
| AGACGCTTGGATTCGTCAAT+AGG | 0.342855 | 5.1:+18975796 | None:intergenic |
| CAATATGCTTACTTGGTCAT+TGG | 0.347638 | 5.1:+18972874 | None:intergenic |
| GGTTGTGAAGCCGGCGTATC+CGG | 0.350381 | 5.1:-18976004 | MS.gene72904:CDS |
| GTTACACATTTGCGCCCTTC+AGG | 0.359236 | 5.1:+18975832 | None:intergenic |
| TCTGTATAAGCTTCGAACTT+TGG | 0.372490 | 5.1:+18972919 | None:intergenic |
| TCTCGTATTTCCGGTGTGAC+GGG | 0.380690 | 5.1:-18976243 | MS.gene72904:CDS |
| CAGCTGTGTGCTCAGGGCGA+TGG | 0.385325 | 5.1:-18975863 | MS.gene72904:CDS |
| ATCATAATAGGGGAGATAAT+TGG | 0.389586 | 5.1:-18976440 | MS.gene72904:CDS |
| ACATCTAGAGGCTCAACTTT+CGG | 0.391126 | 5.1:+18976303 | None:intergenic |
| ATAACTGATCGTAGTCGCTT+AGG | 0.393112 | 5.1:+18972665 | None:intergenic |
| AATCCAAGCGTCTGAAATTA+GGG | 0.394591 | 5.1:-18975786 | MS.gene72904:CDS |
| AAGAAGTACTCCGCAACATC+TGG | 0.402272 | 5.1:+18973578 | None:intergenic |
| TTTGTTATAGGTGTGGTAAA+GGG | 0.404012 | 5.1:-18975936 | MS.gene72904:CDS |
| AGCTGAAGCCTGGTAGATAT+TGG | 0.404152 | 5.1:-18975588 | MS.gene72904:CDS |
| GAGAAAGATGAAAATTACTA+TGG | 0.405466 | 5.1:-18972253 | MS.gene72904:CDS |
| AATCATAGTCCAAGGGTGTC+TGG | 0.406251 | 5.1:-18976213 | MS.gene72904:CDS |
| GGTTACTCAGGGAAATGGTT+TGG | 0.408020 | 5.1:-18972974 | MS.gene72904:CDS |
| GCATATTCACGTGTCGCTGC+AGG | 0.408474 | 5.1:+18973677 | None:intergenic |
| ATCTCAGGTACCAACTCATA+AGG | 0.412874 | 5.1:-18972768 | MS.gene72904:intron |
| ATTGCAGCAGCTGTGTGCTC+AGG | 0.424032 | 5.1:-18975870 | MS.gene72904:CDS |
| TTCCTGTGATGGATGCATAA+AGG | 0.425207 | 5.1:+18972368 | None:intergenic |
| TTTCCCTAATTTCAGACGCT+TGG | 0.425388 | 5.1:+18975783 | None:intergenic |
| CTTCAGCTTGCGTGGAGGTA+AGG | 0.430576 | 5.1:+18975603 | None:intergenic |
| CTCCTGGACATTATAGCCAC+TGG | 0.433165 | 5.1:-18973719 | MS.gene72904:CDS |
| CATAAAAGAGGTTCTTAAAT+GGG | 0.433650 | 5.1:-18972281 | MS.gene72904:CDS |
| TTGTTGTCGTGTGCGCGAAC+GGG | 0.436899 | 5.1:+18972442 | None:intergenic |
| GAAGGTCAAAAGAATATAAG+AGG | 0.437475 | 5.1:-18974808 | MS.gene72904:CDS |
| TATTGGTACGACAAAGAATC+TGG | 0.439746 | 5.1:-18975571 | MS.gene72904:CDS |
| AGCTGTGTGCTCAGGGCGAT+GGG | 0.439917 | 5.1:-18975862 | MS.gene72904:CDS |
| GTCTCGTATTTCCGGTGTGA+CGG | 0.440450 | 5.1:-18976244 | MS.gene72904:CDS |
| GAATATAAGAGGAAACATTT+GGG | 0.444612 | 5.1:-18974797 | MS.gene72904:CDS |
| GTTCCGCTGCCATTGCTGTC+TGG | 0.451485 | 5.1:+18972634 | None:intergenic |
| TAACAAATACGACGTCTTCG+AGG | 0.451533 | 5.1:-18972518 | MS.gene72904:CDS |
| TTGAAGGTCACTTGTATCGC+TGG | 0.452762 | 5.1:+18973626 | None:intergenic |
| GAAGGGGTTACTCAGGGAAA+TGG | 0.456344 | 5.1:-18972979 | MS.gene72904:CDS |
| GTTTGTTATAGGTGTGGTAA+AGG | 0.458659 | 5.1:-18975937 | MS.gene72904:CDS |
| ATCCCGACTGTTGAGTCCTC+TGG | 0.461629 | 5.1:-18975746 | MS.gene72904:CDS |
| ACGGTATTAAAAGTTACAAC+AGG | 0.462099 | 5.1:+18976057 | None:intergenic |
| GGTGGTGGAGGTTGTGAAGC+CGG | 0.462707 | 5.1:-18976013 | MS.gene72904:CDS |
| TTTGAACTAATGATTCTGTC+AGG | 0.463062 | 5.1:+18975151 | None:intergenic |
| TTCGGTACTTCATAAGAAAC+CGG | 0.463768 | 5.1:+18976321 | None:intergenic |
| TAACTGATCGTAGTCGCTTA+GGG | 0.465956 | 5.1:+18972666 | None:intergenic |
| AACTCGAATTGAGGGTACTC+AGG | 0.466428 | 5.1:-18975048 | MS.gene72904:CDS |
| GCAACCTTCGCTCATGCCCT+TGG | 0.468837 | 5.1:+18972738 | None:intergenic |
| GTTGTTGTCGTGTGCGCGAA+CGG | 0.469425 | 5.1:+18972441 | None:intergenic |
| TGGCATTCACCCTTATGAGT+TGG | 0.476657 | 5.1:+18972758 | None:intergenic |
| TCTTGATTACTCGACAGCTT+CGG | 0.477356 | 5.1:-18976358 | MS.gene72904:CDS |
| GTTCAAACTTGAATTTCTCT+GGG | 0.480058 | 5.1:-18975135 | MS.gene72904:CDS |
| AGTAAGTCTTCCATCTCATC+AGG | 0.480096 | 5.1:+18975634 | None:intergenic |
| TCTGAACTTCCAGACACCCT+TGG | 0.482123 | 5.1:+18976204 | None:intergenic |
| CGACAAAGAATCTGGTCTAT+GGG | 0.487042 | 5.1:-18975563 | MS.gene72904:CDS |
| GGCGAACCAGAAGAAAGATC+CGG | 0.487194 | 5.1:+18976156 | None:intergenic |
| GACACCCTTGGACTATGATT+AGG | 0.488171 | 5.1:+18976216 | None:intergenic |
| TTCTCTCTACCCTATCCTCA+TGG | 0.490716 | 5.1:-18974663 | MS.gene72904:CDS |
| GGGAGATAATTGGAGGGAAG+TGG | 0.490835 | 5.1:-18976430 | MS.gene72904:CDS |
| GACTCAGAGGAAAGAGGTGG+TGG | 0.491543 | 5.1:-18976028 | MS.gene72904:CDS |
| AAGCTTGATGTGCTAGTGAT+TGG | 0.491832 | 5.1:+18972419 | None:intergenic |
| TCCTGGACATTATAGCCACT+GGG | 0.495286 | 5.1:-18973718 | MS.gene72904:CDS |
| CTCTTCACCTCATTAATCAC+CGG | 0.497000 | 5.1:+18976084 | None:intergenic |
| GAGGCTGTTTCTAGAATGAA+TGG | 0.497615 | 5.1:-18974186 | MS.gene72904:CDS |
| TTCACAACTCCAACGTACTC+CGG | 0.498553 | 5.1:+18975985 | None:intergenic |
| AACACTGAGGTTTACATCAA+TGG | 0.499687 | 5.1:-18975085 | MS.gene72904:CDS |
| TTCGGAATATTTAGGTCCAC+CGG | 0.500662 | 5.1:-18976340 | MS.gene72904:CDS |
| GAACCATTCACAAGCGTTGA+GGG | 0.500930 | 5.1:+18972477 | None:intergenic |
| TTGCGGAGTACTTCTTAAGC+CGG | 0.502186 | 5.1:-18973571 | MS.gene72904:CDS |
| TCAAGATTAGAAGCGTCATC+AGG | 0.502867 | 5.1:+18976375 | None:intergenic |
| ATATGCAGAAGGGGTTACTC+AGG | 0.507616 | 5.1:-18972986 | MS.gene72904:CDS |
| GAAAGCGGAGAAAGAATGTT+CGG | 0.508911 | 5.1:-18975707 | MS.gene72904:CDS |
| CCGTTGACACTCAACTGCTC+TGG | 0.510346 | 5.1:+18975670 | None:intergenic |
| TTCAGCTTGCGTGGAGGTAA+GGG | 0.513690 | 5.1:+18975604 | None:intergenic |
| TTCGAATGTTGCTTCTAAGC+CGG | 0.514313 | 5.1:-18976103 | MS.gene72904:CDS |
| TTCTTCTTCTTGGAATTCAA+GGG | 0.514846 | 5.1:-18974560 | MS.gene72904:CDS |
| GACCTTTATGCATCCATCAC+AGG | 0.514967 | 5.1:-18972370 | MS.gene72904:CDS |
| ATGAGGCTGTCCATGAGGAT+AGG | 0.516805 | 5.1:+18974653 | None:intergenic |
| CCTGCTCACATTATGGAAGC+TGG | 0.518201 | 5.1:-18974153 | MS.gene72904:intron |
| TCACTTCCTTCCAGATGTTG+CGG | 0.521515 | 5.1:-18973588 | MS.gene72904:CDS |
| CGCAAATGTGTAACATGCAT+CGG | 0.521554 | 5.1:-18975823 | MS.gene72904:CDS |
| TGGTTCGCCTTCAGCTTCAC+CGG | 0.523608 | 5.1:-18976142 | MS.gene72904:CDS |
| TATCCCTCAACGCTTGTGAA+TGG | 0.523776 | 5.1:-18972480 | MS.gene72904:CDS |
| ATATCTGTAATTGAATCCTC+AGG | 0.524085 | 5.1:+18972226 | None:intergenic |
| CCTCCACGCAAGCTGAAGCC+TGG | 0.524656 | 5.1:-18975598 | MS.gene72904:CDS |
| TTAGCACTGATGCTAGTAAC+GGG | 0.524938 | 5.1:-18975108 | MS.gene72904:CDS |
| GAAGGATTATGAACCGAAGC+CGG | 0.527127 | 5.1:+18976123 | None:intergenic |
| TGAAATTAGGGAAATATTCG+AGG | 0.529424 | 5.1:-18975774 | MS.gene72904:CDS |
| TCTCAGGTACCAACTCATAA+GGG | 0.529434 | 5.1:-18972767 | MS.gene72904:intron |
| CCCCAGTGGCTATAATGTCC+AGG | 0.529739 | 5.1:+18973717 | None:intergenic |
| GTCTGGAAGTTCAGAATCTG+TGG | 0.530261 | 5.1:-18976196 | MS.gene72904:CDS |
| ATAGGTGTGGTAAAGGGAAG+TGG | 0.530493 | 5.1:-18975930 | MS.gene72904:CDS |
| GATGAGATGGAAGACTTACT+TGG | 0.532781 | 5.1:-18975631 | MS.gene72904:CDS |
| TTCCACACTTCTTCGACTAG+TGG | 0.534470 | 5.1:+18973653 | None:intergenic |
| AAATACGAGACATCGGCAAA+GGG | 0.534604 | 5.1:+18976256 | None:intergenic |
| CGACTATGAACCTTCTGAAA+GGG | 0.535573 | 5.1:-18973016 | MS.gene72904:CDS |
| TCTCCTCAAGCCTGATGAGA+TGG | 0.535683 | 5.1:-18975644 | MS.gene72904:CDS |
| ATAATTTGCTTAACTTCCAG+AGG | 0.535842 | 5.1:+18975730 | None:intergenic |
| TGAGGCTGTCCATGAGGATA+GGG | 0.536471 | 5.1:+18974654 | None:intergenic |
| AATCTTTATTCAGGTAGCAA+TGG | 0.537742 | 5.1:-18973809 | MS.gene72904:intron |
| TTGTTGCACAAGTTAGGGCA+AGG | 0.539883 | 5.1:-18972336 | MS.gene72904:CDS |
| AGCATTCAAGTACATAAAAG+AGG | 0.541232 | 5.1:-18972293 | MS.gene72904:CDS |
| CAAATTTACTGATCAAGAGC+TGG | 0.541738 | 5.1:-18974289 | MS.gene72904:CDS |
| AGGATAGGGTAGAGAGAAGA+GGG | 0.541964 | 5.1:+18974668 | None:intergenic |
| TATAATGTCCAGGAGCCAAT+CGG | 0.542069 | 5.1:+18973727 | None:intergenic |
| GATTACAAAACTCGAATTGA+GGG | 0.543174 | 5.1:-18975056 | MS.gene72904:CDS |
| TATCCTCATGGACAGCCTCA+TGG | 0.548421 | 5.1:-18974651 | MS.gene72904:CDS |
| AACTAGCACCATGTTTAAGC+AGG | 0.548505 | 5.1:-18974532 | MS.gene72904:intron |
| CCAGCTTCCATAATGTGAGC+AGG | 0.550063 | 5.1:+18974153 | None:intergenic |
| AAACAAGATGATTCAAAGCA+AGG | 0.551964 | 5.1:-18972602 | MS.gene72904:CDS |
| TTGCAGCAGCTGTGTGCTCA+GGG | 0.553376 | 5.1:-18975869 | MS.gene72904:CDS |
| TTGTCGTACCAATATCTACC+AGG | 0.553776 | 5.1:+18975580 | None:intergenic |
| CTCGTATTTCCGGTGTGACG+GGG | 0.555222 | 5.1:-18976242 | MS.gene72904:CDS |
| AAGAGGAAACATTTGGGAGA+AGG | 0.555224 | 5.1:-18974791 | MS.gene72904:intron |
| CTACCAGGCTTCAGCTTGCG+TGG | 0.558966 | 5.1:+18975595 | None:intergenic |
| TGCGGAGTACTTCTTAAGCC+GGG | 0.559400 | 5.1:-18973570 | MS.gene72904:intron |
| CCAGAGCAGTTGAGTGTCAA+CGG | 0.559543 | 5.1:-18975670 | MS.gene72904:CDS |
| TTCTAAGCCGGTGATTAATG+AGG | 0.559865 | 5.1:-18976091 | MS.gene72904:CDS |
| GGTCTCCTAATCATAGTCCA+AGG | 0.562082 | 5.1:-18976221 | MS.gene72904:CDS |
| CTTCCATCTCATCAGGCTTG+AGG | 0.562379 | 5.1:+18975641 | None:intergenic |
| GTGAAGAAGATGCTTCCGCC+GGG | 0.565713 | 5.1:-18976408 | MS.gene72904:CDS |
| TTGGTTGCAACTGAGCATCA+AGG | 0.566584 | 5.1:+18972893 | None:intergenic |
| CGATGGGATCAATGCCTGAA+GGG | 0.567041 | 5.1:-18975846 | MS.gene72904:CDS |
| AAAGGAGTGTCTTTGAAACA+AGG | 0.567459 | 5.1:+18972553 | None:intergenic |
| GCTTGGATTCGTCAATAGGC+TGG | 0.567856 | 5.1:+18975800 | None:intergenic |
| ATAAGAGTTTGTTATAGGTG+TGG | 0.569468 | 5.1:-18975943 | MS.gene72904:CDS |
| GAAATACGAGACATCGGCAA+AGG | 0.569787 | 5.1:+18976255 | None:intergenic |
| TAGGTGTGGTAAAGGGAAGT+GGG | 0.572746 | 5.1:-18975929 | MS.gene72904:CDS |
| CTTCCAGAGGACTCAACAGT+CGG | 0.574189 | 5.1:+18975743 | None:intergenic |
| TCAGAGGAAAGAGGTGGTGG+AGG | 0.574303 | 5.1:-18976025 | MS.gene72904:CDS |
| ACTCATAAGGGTGAATGCCA+AGG | 0.574599 | 5.1:-18972755 | MS.gene72904:CDS |
| AGATTACAAAACTCGAATTG+AGG | 0.575057 | 5.1:-18975057 | MS.gene72904:CDS |
| GGTGAAGAAGATGCTTCCGC+CGG | 0.575635 | 5.1:-18976409 | MS.gene72904:CDS |
| GGTTTCTGTGTTACTAAACC+CGG | 0.577540 | 5.1:-18976175 | MS.gene72904:CDS |
| GCGAACCAGAAGAAAGATCC+GGG | 0.578672 | 5.1:+18976157 | None:intergenic |
| TTCCAGAGGACTCAACAGTC+GGG | 0.579300 | 5.1:+18975744 | None:intergenic |
| TGAACCATTCACAAGCGTTG+AGG | 0.581430 | 5.1:+18972476 | None:intergenic |
| TATAGTATGTCCCTTTCAGA+AGG | 0.581848 | 5.1:+18973006 | None:intergenic |
| TGTTGCACAAGTTAGGGCAA+GGG | 0.583819 | 5.1:-18972335 | MS.gene72904:CDS |
| ACTCGAATTGAGGGTACTCA+GGG | 0.588057 | 5.1:-18975047 | MS.gene72904:intron |
| ATAATAGGGGAGATAATTGG+AGG | 0.588667 | 5.1:-18976437 | MS.gene72904:CDS |
| GCGATGGGATCAATGCCTGA+AGG | 0.590546 | 5.1:-18975847 | MS.gene72904:CDS |
| TTCAAGATATTTAGGAACTG+TGG | 0.591645 | 5.1:+18974602 | None:intergenic |
| AGAATCTGGTCTATGGGGAA+AGG | 0.592126 | 5.1:-18975557 | MS.gene72904:intron |
| GCTCTGAATTTCACATCTAG+AGG | 0.592367 | 5.1:+18976291 | None:intergenic |
| GGCTTAGAAGCAACATTCGA+AGG | 0.592724 | 5.1:+18976105 | None:intergenic |
| CATATTCACGTGTCGCTGCA+GGG | 0.596003 | 5.1:+18973678 | None:intergenic |
| GAGGATAGGGTAGAGAGAAG+AGG | 0.598813 | 5.1:+18974667 | None:intergenic |
| TGAAAGGACTCAGAGGAAAG+AGG | 0.599318 | 5.1:-18976034 | MS.gene72904:CDS |
| CACCACTAGTCGAAGAAGTG+TGG | 0.599546 | 5.1:-18973655 | MS.gene72904:CDS |
| AAGGAGTGTCTTTGAAACAA+GGG | 0.599710 | 5.1:+18972554 | None:intergenic |
| CTTAGCACTGATGCTAGTAA+CGG | 0.601560 | 5.1:-18975109 | MS.gene72904:CDS |
| ACGACTATGAACCTTCTGAA+AGG | 0.605948 | 5.1:-18973017 | MS.gene72904:CDS |
| GTTTGAAGATGTTAGAGCAG+TGG | 0.606106 | 5.1:-18972701 | MS.gene72904:CDS |
| GCATGAGCGAAGGTTGCAAG+TGG | 0.608881 | 5.1:-18972732 | MS.gene72904:CDS |
| AAAGATATGGATCATAATAG+GGG | 0.609084 | 5.1:-18976450 | None:intergenic |
| CTCATAAGGGTGAATGCCAA+GGG | 0.609756 | 5.1:-18972754 | MS.gene72904:CDS |
| GCATCTATTCTCTCAACCCA+AGG | 0.609797 | 5.1:-18973763 | MS.gene72904:CDS |
| AAGCCATACCTGCTTAAACA+TGG | 0.609945 | 5.1:+18974524 | None:intergenic |
| AATGCCAAGGGCATGAGCGA+AGG | 0.610410 | 5.1:-18972742 | MS.gene72904:CDS |
| TTTCCTCTGAGTCCTTTCAA+CGG | 0.611134 | 5.1:+18976038 | None:intergenic |
| GGGACATACTATATGCAGAA+GGG | 0.611389 | 5.1:-18972996 | MS.gene72904:CDS |
| ACCGAAGCCGGTGAAGCTGA+AGG | 0.614449 | 5.1:+18976135 | None:intergenic |
| CGGTGATTAATGAGGTGAAG+AGG | 0.615253 | 5.1:-18976083 | MS.gene72904:CDS |
| GGACATACTATATGCAGAAG+GGG | 0.618757 | 5.1:-18972995 | MS.gene72904:CDS |
| GTCTCCTAATCATAGTCCAA+GGG | 0.620517 | 5.1:-18976220 | MS.gene72904:CDS |
| AGTTAAGCAAATTATGAAAG+CGG | 0.624149 | 5.1:-18975722 | MS.gene72904:CDS |
| AGTACTCCGCAACATCTGGA+AGG | 0.629530 | 5.1:+18973582 | None:intergenic |
| GCACCAGACAGCAATGGCAG+CGG | 0.631434 | 5.1:-18972637 | MS.gene72904:CDS |
| GAAATTAGGGAAATATTCGA+GGG | 0.635307 | 5.1:-18975773 | MS.gene72904:CDS |
| AGGGACATACTATATGCAGA+AGG | 0.636022 | 5.1:-18972997 | MS.gene72904:CDS |
| GACAAAGAATCTGGTCTATG+GGG | 0.638895 | 5.1:-18975562 | MS.gene72904:CDS |
| ATTTACTGATCAAGAGCTGG+AGG | 0.639867 | 5.1:-18974286 | MS.gene72904:CDS |
| TTATGATGATGGTCGTTACG+AGG | 0.640902 | 5.1:-18974833 | MS.gene72904:CDS |
| GTTTCTAGAATGAATGGACA+AGG | 0.641804 | 5.1:-18974180 | MS.gene72904:CDS |
| TATCTTGCACCAGACAGCAA+TGG | 0.641825 | 5.1:-18972643 | MS.gene72904:CDS |
| GATGGTCGTTACGAGGAGGA+AGG | 0.643902 | 5.1:-18974826 | MS.gene72904:CDS |
| TCTGTAATTGAATCCTCAGG+TGG | 0.650948 | 5.1:+18972229 | None:intergenic |
| TCATCAGGAACAGAAGCACC+CGG | 0.654089 | 5.1:+18976390 | None:intergenic |
| TAATAGGGGAGATAATTGGA+GGG | 0.655104 | 5.1:-18976436 | MS.gene72904:CDS |
| TGATGATGGTCGTTACGAGG+AGG | 0.655963 | 5.1:-18974830 | MS.gene72904:CDS |
| ATTAGGAGACCCCGTCACAC+CGG | 0.657996 | 5.1:+18976233 | None:intergenic |
| CCGGCGTATCCGGAGTACGT+TGG | 0.658309 | 5.1:-18975994 | MS.gene72904:CDS |
| TATGCAGAAGGGGTTACTCA+GGG | 0.660136 | 5.1:-18972985 | MS.gene72904:CDS |
| CCAGGCTTCAGCTTGCGTGG+AGG | 0.664286 | 5.1:+18975598 | None:intergenic |
| GGTACTTCATAAGAAACCGG+TGG | 0.665395 | 5.1:+18976324 | None:intergenic |
| GATCCATGAGGCTGTCCATG+AGG | 0.673737 | 5.1:+18974648 | None:intergenic |
| GCCTCGTCTCTTGATCCATG+AGG | 0.673748 | 5.1:+18974636 | None:intergenic |
| CATGAGCGAAGGTTGCAAGT+GGG | 0.675143 | 5.1:-18972731 | MS.gene72904:CDS |
| CCAACGTACTCCGGATACGC+CGG | 0.685156 | 5.1:+18975994 | None:intergenic |
| ACCCAAAAGTGAGTATCACG+TGG | 0.685386 | 5.1:+18974856 | None:intergenic |
| ACACCGGAAATACGAGACAT+CGG | 0.699999 | 5.1:+18976249 | None:intergenic |
| GCCTCATGGATCAAGAGACG+AGG | 0.704715 | 5.1:-18974637 | MS.gene72904:CDS |
| AAATTACTATGGTCCACCTG+AGG | 0.707677 | 5.1:-18972242 | MS.gene72904:CDS |
| AAGGACTCAGAGGAAAGAGG+TGG | 0.708006 | 5.1:-18976031 | MS.gene72904:CDS |
| ATACCGTTGAAAGGACTCAG+AGG | 0.712232 | 5.1:-18976041 | MS.gene72904:CDS |
| CCTGGACATTATAGCCACTG+GGG | 0.716191 | 5.1:-18973717 | MS.gene72904:CDS |
| TGCTAGTAACGGGAACACTG+AGG | 0.725800 | 5.1:-18975098 | MS.gene72904:CDS |
| GAATGCATCTAAATCCCCAG+TGG | 0.756546 | 5.1:+18973703 | None:intergenic |
| TCAGGAACAGAAGCACCCGG+CGG | 0.793880 | 5.1:+18976393 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATGATTATGAATATAGATT+CGG | - | chr5.1:18974720-18974739 | MS.gene72904:intron | 15.0% |
| !! | TATTGTTAATATGTACTTAA+TGG | + | chr5.1:18975841-18975860 | None:intergenic | 15.0% |
| !! | AACTGAAAATTCAAAGAAAA+AGG | + | chr5.1:18973747-18973766 | None:intergenic | 20.0% |
| !! | AATTTACAGATGCTATAATT+AGG | - | chr5.1:18975188-18975207 | MS.gene72904:intron | 20.0% |
| !! | ATTTACAGATGCTATAATTA+GGG | - | chr5.1:18975189-18975208 | MS.gene72904:intron | 20.0% |
| !! | TAATCCGAATATTAAAATAG+TGG | + | chr5.1:18973678-18973697 | None:intergenic | 20.0% |
| !! | TATGTACTTAATGGAAAAAA+TGG | + | chr5.1:18975832-18975851 | None:intergenic | 20.0% |
| !! | TCCTTATCATTATCATATTT+CGG | - | chr5.1:18973698-18973717 | MS.gene72904:CDS | 20.0% |
| !! | TTAATGTTCAGAATGAATAA+TGG | + | chr5.1:18975168-18975187 | None:intergenic | 20.0% |
| !! | TTGTTAAGAACTAGTATTAA+AGG | + | chr5.1:18976107-18976126 | None:intergenic | 20.0% |
| !!! | AGAAAATAAGAGTTTGTTAT+AGG | - | chr5.1:18972691-18972710 | MS.gene72904:CDS | 20.0% |
| !!! | ATAAGTCAAACTTATGATTT+TGG | + | chr5.1:18973213-18973232 | None:intergenic | 20.0% |
| !!! | TATGATTTTGGAGATAAAAT+TGG | + | chr5.1:18973201-18973220 | None:intergenic | 20.0% |
| !!! | TTTGCCACTATTTTAATATT+CGG | - | chr5.1:18973671-18973690 | MS.gene72904:CDS | 20.0% |
| !!! | TTTTTCTGTTCAAGATATTT+AGG | + | chr5.1:18974048-18974067 | None:intergenic | 20.0% |
| !!! | TTTTTCTTTGAATTTTCAGT+TGG | - | chr5.1:18973746-18973765 | MS.gene72904:CDS | 20.0% |
| ! | AATGAAAGCAGAAATATTCT+CGG | + | chr5.1:18973129-18973148 | None:intergenic | 25.0% |
| ! | ACATAAAAGAGGTTCTTAAA+TGG | - | chr5.1:18976357-18976376 | MS.gene72904:CDS | 25.0% |
| ! | ACCTGAATAAAGATTGAAAT+AGG | + | chr5.1:18974825-18974844 | None:intergenic | 25.0% |
| ! | AGAATATAAGAGGAAACATT+TGG | - | chr5.1:18973841-18973860 | MS.gene72904:intron | 25.0% |
| ! | AGATATTCAATATGCTTACT+TGG | + | chr5.1:18975775-18975794 | None:intergenic | 25.0% |
| ! | AGTAAGCATATTGAATATCT+AGG | - | chr5.1:18975775-18975794 | MS.gene72904:CDS | 25.0% |
| ! | AGTTAAGCAAATTATGAAAG+CGG | - | chr5.1:18972917-18972936 | MS.gene72904:CDS | 25.0% |
| ! | ATACAATCTATAAGCTATAC+TGG | + | chr5.1:18975343-18975362 | None:intergenic | 25.0% |
| ! | CAATATTTCTTTGATATCTC+AGG | - | chr5.1:18975856-18975875 | MS.gene72904:CDS | 25.0% |
| ! | CATAAAAGAGGTTCTTAAAT+GGG | - | chr5.1:18976358-18976377 | MS.gene72904:CDS | 25.0% |
| ! | CCTGAATAAAGATTGAAATA+GGG | + | chr5.1:18974824-18974843 | None:intergenic | 25.0% |
| ! | GAATATAAGAGGAAACATTT+GGG | - | chr5.1:18973842-18973861 | MS.gene72904:intron | 25.0% |
| ! | GAGAAAGATGAAAATTACTA+TGG | - | chr5.1:18976386-18976405 | MS.gene72904:CDS | 25.0% |
| ! | GTATTCACTTAAATACTTGT+AGG | - | chr5.1:18973870-18973889 | MS.gene72904:intron | 25.0% |
| !! | ATTATGAATATAGATTCGGT+AGG | - | chr5.1:18974724-18974743 | MS.gene72904:intron | 25.0% |
| !! | GGAATATTATGTTTTCAGTT+GGG | - | chr5.1:18973160-18973179 | MS.gene72904:intron | 25.0% |
| !! | TAACTTTTAATACCGTTGAA+AGG | - | chr5.1:18972589-18972608 | MS.gene72904:CDS | 25.0% |
| !! | TAATGATATCAGAAACCTTT+TGG | - | chr5.1:18974791-18974810 | MS.gene72904:intron | 25.0% |
| !! | TATCTTAGCATTTTACTTGA+TGG | - | chr5.1:18974411-18974430 | MS.gene72904:intron | 25.0% |
| !! | TGGAATATTATGTTTTCAGT+TGG | - | chr5.1:18973159-18973178 | MS.gene72904:intron | 25.0% |
| !! | TTATGAATTTTTCTCATGAC+AGG | - | chr5.1:18973927-18973946 | MS.gene72904:intron | 25.0% |
| AAAAAGTTTCTTTCCTGTGA+TGG | + | chr5.1:18976285-18976304 | None:intergenic | 30.0% | |
| AAACAAGATGATTCAAAGCA+AGG | - | chr5.1:18976037-18976056 | MS.gene72904:CDS | 30.0% | |
| AAATAGGGTAAAACACCAAA+AGG | + | chr5.1:18974809-18974828 | None:intergenic | 30.0% | |
| AATCTTTATTCAGGTAGCAA+TGG | - | chr5.1:18974830-18974849 | MS.gene72904:CDS | 30.0% | |
| ACGGTATTAAAAGTTACAAC+AGG | + | chr5.1:18972585-18972604 | None:intergenic | 30.0% | |
| ACTTAATGGAAAAAATGGTG+CGG | + | chr5.1:18975827-18975846 | None:intergenic | 30.0% | |
| AGATTACAAAACTCGAATTG+AGG | - | chr5.1:18973582-18973601 | MS.gene72904:CDS | 30.0% | |
| AGCATTCAAGTACATAAAAG+AGG | - | chr5.1:18976346-18976365 | MS.gene72904:CDS | 30.0% | |
| AGGTGTTAATGTTAATTCTG+CGG | - | chr5.1:18974744-18974763 | MS.gene72904:intron | 30.0% | |
| AGTTCAAACTTGAATTTCTC+TGG | - | chr5.1:18973503-18973522 | MS.gene72904:intron | 30.0% | |
| ATATCTGTAATTGAATCCTC+AGG | + | chr5.1:18976416-18976435 | None:intergenic | 30.0% | |
| ATCATAATAGGGGAGATAAT+TGG | - | chr5.1:18972199-18972218 | MS.gene72904:CDS | 30.0% | |
| ATGTTTCGAATGCATGTTTA+GGG | + | chr5.1:18974644-18974663 | None:intergenic | 30.0% | |
| CAAACATGACCTAAGTTTAT+TGG | - | chr5.1:18975465-18975484 | MS.gene72904:intron | 30.0% | |
| CAATAAACTTAGGTCATGTT+TGG | + | chr5.1:18975467-18975486 | None:intergenic | 30.0% | |
| CCCTATTTCAATCTTTATTC+AGG | - | chr5.1:18974821-18974840 | MS.gene72904:CDS | 30.0% | |
| CGTTATTCATTTGATAGGAA+GGG | - | chr5.1:18973459-18973478 | MS.gene72904:intron | 30.0% | |
| GAAATTAGGGAAATATTCGA+GGG | - | chr5.1:18972866-18972885 | MS.gene72904:intron | 30.0% | |
| GAAGGTCAAAAGAATATAAG+AGG | - | chr5.1:18973831-18973850 | MS.gene72904:intron | 30.0% | |
| GATTACAAAACTCGAATTGA+GGG | - | chr5.1:18973583-18973602 | MS.gene72904:CDS | 30.0% | |
| GCTATGCATCATAATAGAAA+CGG | - | chr5.1:18975487-18975506 | MS.gene72904:intron | 30.0% | |
| GTTATTCATTTGATAGGAAG+GGG | - | chr5.1:18973460-18973479 | MS.gene72904:intron | 30.0% | |
| GTTCAAACTTGAATTTCTCT+GGG | - | chr5.1:18973504-18973523 | MS.gene72904:intron | 30.0% | |
| TAATTAGGGATGGTTTAGAT+TGG | - | chr5.1:18975203-18975222 | MS.gene72904:intron | 30.0% | |
| TAGTGGCAAAAAAACTCTAT+TGG | + | chr5.1:18973661-18973680 | None:intergenic | 30.0% | |
| TATAACATGATTCTCTTCTG+CGG | - | chr5.1:18974285-18974304 | MS.gene72904:CDS | 30.0% | |
| TCGTTATTCATTTGATAGGA+AGG | - | chr5.1:18973458-18973477 | MS.gene72904:intron | 30.0% | |
| TCTGTCGTTATTCATTTGAT+AGG | - | chr5.1:18973454-18973473 | MS.gene72904:intron | 30.0% | |
| TGAAATTAGGGAAATATTCG+AGG | - | chr5.1:18972865-18972884 | MS.gene72904:intron | 30.0% | |
| TGATTAGATAAGCAATTACC+CGG | + | chr5.1:18975090-18975109 | None:intergenic | 30.0% | |
| TTCAAGATATTTAGGAACTG+TGG | + | chr5.1:18974040-18974059 | None:intergenic | 30.0% | |
| TTCTTCTTCTTGGAATTCAA+GGG | - | chr5.1:18974079-18974098 | MS.gene72904:intron | 30.0% | |
| TTTATTTGTAATCAGAGAGC+AGG | - | chr5.1:18973423-18973442 | MS.gene72904:intron | 30.0% | |
| TTTGAACTAATGATTCTGTC+AGG | + | chr5.1:18973491-18973510 | None:intergenic | 30.0% | |
| TTTGTTCCCGTACAAAAATT+TGG | + | chr5.1:18974334-18974353 | None:intergenic | 30.0% | |
| ! | AACTTTTTGTTGCACAAGTT+AGG | - | chr5.1:18976297-18976316 | MS.gene72904:CDS | 30.0% |
| ! | AAGCTCATCTTTTCTTTTGA+AGG | + | chr5.1:18975032-18975051 | None:intergenic | 30.0% |
| ! | AATATCTAGGACGAAAAAAG+TGG | - | chr5.1:18975788-18975807 | MS.gene72904:CDS | 30.0% |
| ! | AATGTTTTCATTTTCAGCCT+TGG | - | chr5.1:18975526-18975545 | MS.gene72904:intron | 30.0% |
| ! | ACTTTTTGTTGCACAAGTTA+GGG | - | chr5.1:18976298-18976317 | MS.gene72904:CDS | 30.0% |
| ! | ATGTTTTCATTTTCAGCCTT+GGG | - | chr5.1:18975527-18975546 | MS.gene72904:intron | 30.0% |
| ! | GCCGAAATATGATAATGATA+AGG | + | chr5.1:18973702-18973721 | None:intergenic | 30.0% |
| ! | TTTGTTATAGGTGTGGTAAA+GGG | - | chr5.1:18972703-18972722 | MS.gene72904:CDS | 30.0% |
| !! | ATAAGAGTTTGTTATAGGTG+TGG | - | chr5.1:18972696-18972715 | MS.gene72904:CDS | 30.0% |
| !! | ATAATTTGCTTAACTTCCAG+AGG | + | chr5.1:18972912-18972931 | None:intergenic | 30.0% |
| !! | CTGTAATTTTAAGAAGACTC+CGG | + | chr5.1:18975122-18975141 | None:intergenic | 30.0% |
| !! | TGCTTTGAATCATCTTGTTT+TGG | + | chr5.1:18976037-18976056 | None:intergenic | 30.0% |
| AACACTGAGGTTTACATCAA+TGG | - | chr5.1:18973554-18973573 | MS.gene72904:intron | 35.0% | |
| ACAGATGCTATAATTAGGGA+TGG | - | chr5.1:18975193-18975212 | MS.gene72904:intron | 35.0% | |
| AGTTCTGCTATAGTCTCTAT+TGG | + | chr5.1:18973329-18973348 | None:intergenic | 35.0% | |
| ATAATAGGGGAGATAATTGG+AGG | - | chr5.1:18972202-18972221 | MS.gene72904:CDS | 35.0% | |
| CAAATTTACTGATCAAGAGC+TGG | - | chr5.1:18974350-18974369 | MS.gene72904:intron | 35.0% | |
| CAATATGCTTACTTGGTCAT+TGG | + | chr5.1:18975768-18975787 | None:intergenic | 35.0% | |
| CATGTTTCGAATGCATGTTT+AGG | + | chr5.1:18974645-18974664 | None:intergenic | 35.0% | |
| CTGTATAAGCTTCGAACTTT+GGG | + | chr5.1:18975722-18975741 | None:intergenic | 35.0% | |
| CTTCTTCTTCTTGGAATTCA+AGG | - | chr5.1:18974078-18974097 | MS.gene72904:intron | 35.0% | |
| GATGCATAGCCAATAAACTT+AGG | + | chr5.1:18975477-18975496 | None:intergenic | 35.0% | |
| GGTGTTAATGTTAATTCTGC+GGG | - | chr5.1:18974745-18974764 | MS.gene72904:intron | 35.0% | |
| TAATAGGGGAGATAATTGGA+GGG | - | chr5.1:18972203-18972222 | MS.gene72904:CDS | 35.0% | |
| TATAGTATGTCCCTTTCAGA+AGG | + | chr5.1:18975636-18975655 | None:intergenic | 35.0% | |
| TATCTAATCATCCTCGAAAC+CGG | - | chr5.1:18975100-18975119 | MS.gene72904:CDS | 35.0% | |
| TATTGGTACGACAAAGAATC+TGG | - | chr5.1:18973068-18973087 | MS.gene72904:intron | 35.0% | |
| TCTGTATAAGCTTCGAACTT+TGG | + | chr5.1:18975723-18975742 | None:intergenic | 35.0% | |
| TCTTCGAGGAAAAAATGAGA+AGG | - | chr5.1:18976135-18976154 | MS.gene72904:CDS | 35.0% | |
| TTCGGTACTTCATAAGAAAC+CGG | + | chr5.1:18972321-18972340 | None:intergenic | 35.0% | |
| ! | AATCCAAGCGTCTGAAATTA+GGG | - | chr5.1:18972853-18972872 | MS.gene72904:intron | 35.0% |
| ! | TGCTTTCATTTTCGCATGTA+TGG | - | chr5.1:18973139-18973158 | MS.gene72904:intron | 35.0% |
| ! | TGTTTTCATTTTCAGCCTTG+GGG | - | chr5.1:18975528-18975547 | MS.gene72904:intron | 35.0% |
| !! | AAAGGAGTGTCTTTGAAACA+AGG | + | chr5.1:18976089-18976108 | None:intergenic | 35.0% |
| !! | AAGGAGTGTCTTTGAAACAA+GGG | + | chr5.1:18976088-18976107 | None:intergenic | 35.0% |
| !! | GTTTCTAGAATGAATGGACA+AGG | - | chr5.1:18974459-18974478 | MS.gene72904:intron | 35.0% |
| !! | GTTTGTTATAGGTGTGGTAA+AGG | - | chr5.1:18972702-18972721 | MS.gene72904:CDS | 35.0% |
| !!! | AATGTGCTCGCTTTTTTTTC+AGG | - | chr5.1:18975581-18975600 | MS.gene72904:CDS | 35.0% |
| !!! | CACTTTTGGGTTTATGATGA+TGG | - | chr5.1:18973795-18973814 | MS.gene72904:CDS | 35.0% |
| AAATACGAGACATCGGCAAA+GGG | + | chr5.1:18972386-18972405 | None:intergenic | 40.0% | |
| AAATTACTATGGTCCACCTG+AGG | - | chr5.1:18976397-18976416 | MS.gene72904:CDS | 40.0% | |
| AACTAGCACCATGTTTAAGC+AGG | - | chr5.1:18974107-18974126 | MS.gene72904:intron | 40.0% | |
| AAGAGGAAACATTTGGGAGA+AGG | - | chr5.1:18973848-18973867 | MS.gene72904:intron | 40.0% | |
| AAGCCATACCTGCTTAAACA+TGG | + | chr5.1:18974118-18974137 | None:intergenic | 40.0% | |
| AAGCTTGATGTGCTAGTGAT+TGG | + | chr5.1:18976223-18976242 | None:intergenic | 40.0% | |
| ACATCTAGAGGCTCAACTTT+CGG | + | chr5.1:18972339-18972358 | None:intergenic | 40.0% | |
| ACGACAAAGAATCTGGTCTA+TGG | - | chr5.1:18973075-18973094 | MS.gene72904:intron | 40.0% | |
| ACGACTATGAACCTTCTGAA+AGG | - | chr5.1:18975622-18975641 | MS.gene72904:CDS | 40.0% | |
| ACTCAGAAGCTTCTTCTTCT+TGG | - | chr5.1:18974069-18974088 | MS.gene72904:intron | 40.0% | |
| AGGGACATACTATATGCAGA+AGG | - | chr5.1:18975642-18975661 | MS.gene72904:CDS | 40.0% | |
| AGTAAGTCTTCCATCTCATC+AGG | + | chr5.1:18973008-18973027 | None:intergenic | 40.0% | |
| ATAACTGATCGTAGTCGCTT+AGG | + | chr5.1:18975977-18975996 | None:intergenic | 40.0% | |
| ATCTCAGGTACCAACTCATA+AGG | - | chr5.1:18975871-18975890 | MS.gene72904:CDS | 40.0% | |
| ATTTACTGATCAAGAGCTGG+AGG | - | chr5.1:18974353-18974372 | MS.gene72904:intron | 40.0% | |
| CGACAAAGAATCTGGTCTAT+GGG | - | chr5.1:18973076-18973095 | MS.gene72904:intron | 40.0% | |
| CGCAAATGTGTAACATGCAT+CGG | - | chr5.1:18972816-18972835 | MS.gene72904:intron | 40.0% | |
| CTCTTCACCTCATTAATCAC+CGG | + | chr5.1:18972558-18972577 | None:intergenic | 40.0% | |
| GAAAGCGGAGAAAGAATGTT+CGG | - | chr5.1:18972932-18972951 | MS.gene72904:CDS | 40.0% | |
| GACAAAGAATCTGGTCTATG+GGG | - | chr5.1:18973077-18973096 | MS.gene72904:intron | 40.0% | |
| GATGAGATGGAAGACTTACT+TGG | - | chr5.1:18973008-18973027 | MS.gene72904:CDS | 40.0% | |
| GGACATACTATATGCAGAAG+GGG | - | chr5.1:18975644-18975663 | MS.gene72904:CDS | 40.0% | |
| GGGACATACTATATGCAGAA+GGG | - | chr5.1:18975643-18975662 | MS.gene72904:CDS | 40.0% | |
| GTCTCCTAATCATAGTCCAA+GGG | - | chr5.1:18972419-18972438 | MS.gene72904:CDS | 40.0% | |
| GTTTGAAGATGTTAGAGCAG+TGG | - | chr5.1:18975938-18975957 | MS.gene72904:CDS | 40.0% | |
| TAACAAATACGACGTCTTCG+AGG | - | chr5.1:18976121-18976140 | MS.gene72904:CDS | 40.0% | |
| TAACTGATCGTAGTCGCTTA+GGG | + | chr5.1:18975976-18975995 | None:intergenic | 40.0% | |
| TATAATGTCCAGGAGCCAAT+CGG | + | chr5.1:18974915-18974934 | None:intergenic | 40.0% | |
| TCAATACCTTAATCTCCCCA+AGG | + | chr5.1:18975546-18975565 | None:intergenic | 40.0% | |
| TCGACAGCTTCGGAATATTT+AGG | - | chr5.1:18972291-18972310 | MS.gene72904:CDS | 40.0% | |
| TCTATAAGCTATACTGGAGC+TGG | + | chr5.1:18975337-18975356 | None:intergenic | 40.0% | |
| TCTCAGGTACCAACTCATAA+GGG | - | chr5.1:18975872-18975891 | MS.gene72904:CDS | 40.0% | |
| TCTGTAATTGAATCCTCAGG+TGG | + | chr5.1:18976413-18976432 | None:intergenic | 40.0% | |
| TCTTGATTACTCGACAGCTT+CGG | - | chr5.1:18972281-18972300 | MS.gene72904:CDS | 40.0% | |
| TGATCTTATGATTGCTGAGC+AGG | - | chr5.1:18974308-18974327 | MS.gene72904:CDS | 40.0% | |
| TTCGGAATATTTAGGTCCAC+CGG | - | chr5.1:18972299-18972318 | MS.gene72904:CDS | 40.0% | |
| TTCGGCATCATTGAACTCAA+TGG | - | chr5.1:18973716-18973735 | MS.gene72904:CDS | 40.0% | |
| TTCTAAGCCGGTGATTAATG+AGG | - | chr5.1:18972548-18972567 | MS.gene72904:CDS | 40.0% | |
| TTGTCGTACCAATATCTACC+AGG | + | chr5.1:18973062-18973081 | None:intergenic | 40.0% | |
| TTTCCCTAATTTCAGACGCT+TGG | + | chr5.1:18972859-18972878 | None:intergenic | 40.0% | |
| TTTCCTCTGAGTCCTTTCAA+CGG | + | chr5.1:18972604-18972623 | None:intergenic | 40.0% | |
| ! | AGCAGGCCAAATTTTTGTAC+GGG | - | chr5.1:18974325-18974344 | MS.gene72904:intron | 40.0% |
| ! | CAAGGAGCTTTTCGAAACAA+TGG | - | chr5.1:18976055-18976074 | MS.gene72904:CDS | 40.0% |
| ! | CGACTATGAACCTTCTGAAA+GGG | - | chr5.1:18975623-18975642 | MS.gene72904:CDS | 40.0% |
| ! | GAATCCAAGCGTCTGAAATT+AGG | - | chr5.1:18972852-18972871 | MS.gene72904:intron | 40.0% |
| ! | GAGCAGGCCAAATTTTTGTA+CGG | - | chr5.1:18974324-18974343 | MS.gene72904:intron | 40.0% |
| ! | GCTCTGAATTTCACATCTAG+AGG | + | chr5.1:18972351-18972370 | None:intergenic | 40.0% |
| ! | GGTTTCTGTGTTACTAAACC+CGG | - | chr5.1:18972464-18972483 | MS.gene72904:CDS | 40.0% |
| ! | TCGAATGCATGTTTAGGGTT+AGG | + | chr5.1:18974639-18974658 | None:intergenic | 40.0% |
| ! | TTCGAATGTTGCTTCTAAGC+CGG | - | chr5.1:18972536-18972555 | MS.gene72904:CDS | 40.0% |
| !! | CTTAGCACTGATGCTAGTAA+CGG | - | chr5.1:18973530-18973549 | MS.gene72904:intron | 40.0% |
| !! | GAGGCTGTTTCTAGAATGAA+TGG | - | chr5.1:18974453-18974472 | MS.gene72904:intron | 40.0% |
| !! | TCAAGATTAGAAGCGTCATC+AGG | + | chr5.1:18972267-18972286 | None:intergenic | 40.0% |
| !! | TCCACGTGATACTCACTTTT+GGG | - | chr5.1:18973782-18973801 | MS.gene72904:CDS | 40.0% |
| !! | TTAGCACTGATGCTAGTAAC+GGG | - | chr5.1:18973531-18973550 | MS.gene72904:intron | 40.0% |
| !! | TTATGATGATGGTCGTTACG+AGG | - | chr5.1:18973806-18973825 | MS.gene72904:intron | 40.0% |
| !! | TTCCTGTGATGGATGCATAA+AGG | + | chr5.1:18976274-18976293 | None:intergenic | 40.0% |
| ACACCGGAAATACGAGACAT+CGG | + | chr5.1:18972393-18972412 | None:intergenic | 45.0% | |
| ACCCAAAAGTGAGTATCACG+TGG | + | chr5.1:18973786-18973805 | None:intergenic | 45.0% | |
| ACTCATAAGGGTGAATGCCA+AGG | - | chr5.1:18975884-18975903 | MS.gene72904:CDS | 45.0% | |
| AGAATCTGGTCTATGGGGAA+AGG | - | chr5.1:18973082-18973101 | MS.gene72904:intron | 45.0% | |
| AGACGCTTGGATTCGTCAAT+AGG | + | chr5.1:18972846-18972865 | None:intergenic | 45.0% | |
| AGCTGAAGCCTGGTAGATAT+TGG | - | chr5.1:18973051-18973070 | MS.gene72904:intron | 45.0% | |
| AGGATAGGGTAGAGAGAAGA+GGG | + | chr5.1:18973974-18973993 | None:intergenic | 45.0% | |
| AGGTTCTCCTGCTCACATTA+TGG | - | chr5.1:18974479-18974498 | MS.gene72904:intron | 45.0% | |
| ATACCGTTGAAAGGACTCAG+AGG | - | chr5.1:18972598-18972617 | MS.gene72904:CDS | 45.0% | |
| ATAGGTGTGGTAAAGGGAAG+TGG | - | chr5.1:18972709-18972728 | MS.gene72904:CDS | 45.0% | |
| ATATGCAGAAGGGGTTACTC+AGG | - | chr5.1:18975653-18975672 | MS.gene72904:CDS | 45.0% | |
| CGGAAAAATGCTTCAGCCTT+GGG | + | chr5.1:18974895-18974914 | None:intergenic | 45.0% | |
| CGGTGATTAATGAGGTGAAG+AGG | - | chr5.1:18972556-18972575 | MS.gene72904:CDS | 45.0% | |
| CTAAACCCGGATCTTTCTTC+TGG | - | chr5.1:18972477-18972496 | MS.gene72904:CDS | 45.0% | |
| CTCATAAGGGTGAATGCCAA+GGG | - | chr5.1:18975885-18975904 | MS.gene72904:CDS | 45.0% | |
| CTTCTTGGAATTCAAGGGTC+TGG | - | chr5.1:18974084-18974103 | MS.gene72904:intron | 45.0% | |
| GAAATACGAGACATCGGCAA+AGG | + | chr5.1:18972387-18972406 | None:intergenic | 45.0% | |
| GAAGGATTATGAACCGAAGC+CGG | + | chr5.1:18972519-18972538 | None:intergenic | 45.0% | |
| GAATGCATCTAAATCCCCAG+TGG | + | chr5.1:18974939-18974958 | None:intergenic | 45.0% | |
| GACACCCTTGGACTATGATT+AGG | + | chr5.1:18972426-18972445 | None:intergenic | 45.0% | |
| GACCTTTATGCATCCATCAC+AGG | - | chr5.1:18976269-18976288 | MS.gene72904:CDS | 45.0% | |
| GCACCATGTTTAAGCAGGTA+TGG | - | chr5.1:18974112-18974131 | MS.gene72904:intron | 45.0% | |
| GCATCTATTCTCTCAACCCA+AGG | - | chr5.1:18974876-18974895 | MS.gene72904:CDS | 45.0% | |
| GGCTTAGAAGCAACATTCGA+AGG | + | chr5.1:18972537-18972556 | None:intergenic | 45.0% | |
| GGTACTTCATAAGAAACCGG+TGG | + | chr5.1:18972318-18972337 | None:intergenic | 45.0% | |
| GGTCTCCTAATCATAGTCCA+AGG | - | chr5.1:18972418-18972437 | MS.gene72904:CDS | 45.0% | |
| GGTTACTCAGGGAAATGGTT+TGG | - | chr5.1:18975665-18975684 | MS.gene72904:CDS | 45.0% | |
| GTCTGGAAGTTCAGAATCTG+TGG | - | chr5.1:18972443-18972462 | MS.gene72904:CDS | 45.0% | |
| TAGGTGTGGTAAAGGGAAGT+GGG | - | chr5.1:18972710-18972729 | MS.gene72904:CDS | 45.0% | |
| TATCCCTCAACGCTTGTGAA+TGG | - | chr5.1:18976159-18976178 | MS.gene72904:CDS | 45.0% | |
| TATCTTGCACCAGACAGCAA+TGG | - | chr5.1:18975996-18976015 | MS.gene72904:CDS | 45.0% | |
| TATGCAGAAGGGGTTACTCA+GGG | - | chr5.1:18975654-18975673 | MS.gene72904:CDS | 45.0% | |
| TCACTTCCTTCCAGATGTTG+CGG | - | chr5.1:18975051-18975070 | MS.gene72904:CDS | 45.0% | |
| TCCTGGACATTATAGCCACT+GGG | - | chr5.1:18974921-18974940 | MS.gene72904:intron | 45.0% | |
| TCGAAACATGCATGCGTACA+TGG | - | chr5.1:18974655-18974674 | MS.gene72904:CDS | 45.0% | |
| TCGGAAAAATGCTTCAGCCT+TGG | + | chr5.1:18974896-18974915 | None:intergenic | 45.0% | |
| TGAAAGGACTCAGAGGAAAG+AGG | - | chr5.1:18972605-18972624 | MS.gene72904:CDS | 45.0% | |
| TGGCATTCACCCTTATGAGT+TGG | + | chr5.1:18975884-18975903 | None:intergenic | 45.0% | |
| TGTTGCACAAGTTAGGGCAA+GGG | - | chr5.1:18976304-18976323 | MS.gene72904:CDS | 45.0% | |
| TTAAGAAGACTCCGGTTTCG+AGG | + | chr5.1:18975114-18975133 | None:intergenic | 45.0% | |
| TTCACAACTCCAACGTACTC+CGG | + | chr5.1:18972657-18972676 | None:intergenic | 45.0% | |
| TTCCACACTTCTTCGACTAG+TGG | + | chr5.1:18974989-18975008 | None:intergenic | 45.0% | |
| TTCTCTCTACCCTATCCTCA+TGG | - | chr5.1:18973976-18973995 | MS.gene72904:intron | 45.0% | |
| TTGAAGGTCACTTGTATCGC+TGG | + | chr5.1:18975016-18975035 | None:intergenic | 45.0% | |
| TTGCCGATGTCTCGTATTTC+CGG | - | chr5.1:18972387-18972406 | MS.gene72904:CDS | 45.0% | |
| TTGGTTGCAACTGAGCATCA+AGG | + | chr5.1:18975749-18975768 | None:intergenic | 45.0% | |
| TTGTTGCACAAGTTAGGGCA+AGG | - | chr5.1:18976303-18976322 | MS.gene72904:CDS | 45.0% | |
| TTTCAGCCTTGGGGAGATTA+AGG | - | chr5.1:18975537-18975556 | MS.gene72904:intron | 45.0% | |
| ! | GTCCACGTGATACTCACTTT+TGG | - | chr5.1:18973781-18973800 | MS.gene72904:CDS | 45.0% |
| ! | TGAACCATTCACAAGCGTTG+AGG | + | chr5.1:18976166-18976185 | None:intergenic | 45.0% |
| ! | TTGCGGAGTACTTCTTAAGC+CGG | - | chr5.1:18975068-18975087 | MS.gene72904:CDS | 45.0% |
| !! | AACTCGAATTGAGGGTACTC+AGG | - | chr5.1:18973591-18973610 | MS.gene72904:CDS | 45.0% |
| !! | AAGAAGTACTCCGCAACATC+TGG | + | chr5.1:18975064-18975083 | None:intergenic | 45.0% |
| !! | AATCATAGTCCAAGGGTGTC+TGG | - | chr5.1:18972426-18972445 | MS.gene72904:CDS | 45.0% |
| !! | ACTCGAATTGAGGGTACTCA+GGG | - | chr5.1:18973592-18973611 | MS.gene72904:CDS | 45.0% |
| !! | GAACCATTCACAAGCGTTGA+GGG | + | chr5.1:18976165-18976184 | None:intergenic | 45.0% |
| !! | GGCTGAAGCATTTTTCCGAT+TGG | - | chr5.1:18974897-18974916 | MS.gene72904:intron | 45.0% |
| !! | GGGAAATGGTTTGGCTTTCA+TGG | - | chr5.1:18975674-18975693 | MS.gene72904:CDS | 45.0% |
| !!! | AAGAGAGCGTTTTGAAGAGG+AGG | - | chr5.1:18974434-18974453 | MS.gene72904:intron | 45.0% |
| !!! | TGGAAGAGAGCGTTTTGAAG+AGG | - | chr5.1:18974431-18974450 | MS.gene72904:intron | 45.0% |
| AAGGACTCAGAGGAAAGAGG+TGG | - | chr5.1:18972608-18972627 | MS.gene72904:CDS | 50.0% | |
| AGTACTCCGCAACATCTGGA+AGG | + | chr5.1:18975060-18975079 | None:intergenic | 50.0% | |
| ATGAGGCTGTCCATGAGGAT+AGG | + | chr5.1:18973989-18974008 | None:intergenic | 50.0% | |
| CACCACTAGTCGAAGAAGTG+TGG | - | chr5.1:18974984-18975003 | MS.gene72904:intron | 50.0% | |
| CATGAGCGAAGGTTGCAAGT+GGG | - | chr5.1:18975908-18975927 | MS.gene72904:CDS | 50.0% | |
| CCAGAGCAGTTGAGTGTCAA+CGG | - | chr5.1:18972969-18972988 | MS.gene72904:CDS | 50.0% | |
| CCAGCTTCCATAATGTGAGC+AGG | + | chr5.1:18974489-18974508 | None:intergenic | 50.0% | |
| CCTGCTCACATTATGGAAGC+TGG | - | chr5.1:18974486-18974505 | MS.gene72904:intron | 50.0% | |
| CCTGGACATTATAGCCACTG+GGG | - | chr5.1:18974922-18974941 | MS.gene72904:intron | 50.0% | |
| CGATGGGATCAATGCCTGAA+GGG | - | chr5.1:18972793-18972812 | MS.gene72904:intron | 50.0% | |
| CTCCTGGACATTATAGCCAC+TGG | - | chr5.1:18974920-18974939 | MS.gene72904:intron | 50.0% | |
| CTTCCAGAGGACTCAACAGT+CGG | + | chr5.1:18972899-18972918 | None:intergenic | 50.0% | |
| CTTCCATCTCATCAGGCTTG+AGG | + | chr5.1:18973001-18973020 | None:intergenic | 50.0% | |
| GAAGGGGTTACTCAGGGAAA+TGG | - | chr5.1:18975660-18975679 | MS.gene72904:CDS | 50.0% | |
| GAGGATAGGGTAGAGAGAAG+AGG | + | chr5.1:18973975-18973994 | None:intergenic | 50.0% | |
| GCGAACCAGAAGAAAGATCC+GGG | + | chr5.1:18972485-18972504 | None:intergenic | 50.0% | |
| GCTTGGATTCGTCAATAGGC+TGG | + | chr5.1:18972842-18972861 | None:intergenic | 50.0% | |
| GGCGAACCAGAAGAAAGATC+CGG | + | chr5.1:18972486-18972505 | None:intergenic | 50.0% | |
| GGGAGATAATTGGAGGGAAG+TGG | - | chr5.1:18972209-18972228 | MS.gene72904:CDS | 50.0% | |
| GTCTCGTATTTCCGGTGTGA+CGG | - | chr5.1:18972395-18972414 | MS.gene72904:CDS | 50.0% | |
| GTTACACATTTGCGCCCTTC+AGG | + | chr5.1:18972810-18972829 | None:intergenic | 50.0% | |
| TATCCTCATGGACAGCCTCA+TGG | - | chr5.1:18973988-18974007 | MS.gene72904:intron | 50.0% | |
| TCTCCTCAAGCCTGATGAGA+TGG | - | chr5.1:18972995-18973014 | MS.gene72904:CDS | 50.0% | |
| TCTCGTATTTCCGGTGTGAC+GGG | - | chr5.1:18972396-18972415 | MS.gene72904:CDS | 50.0% | |
| TCTGAACTTCCAGACACCCT+TGG | + | chr5.1:18972438-18972457 | None:intergenic | 50.0% | |
| TGAGGCTGTCCATGAGGATA+GGG | + | chr5.1:18973988-18974007 | None:intergenic | 50.0% | |
| TTCAGCTTGCGTGGAGGTAA+GGG | + | chr5.1:18973038-18973057 | None:intergenic | 50.0% | |
| TTCCAGAGGACTCAACAGTC+GGG | + | chr5.1:18972898-18972917 | None:intergenic | 50.0% | |
| ! | CATATTCACGTGTCGCTGCA+GGG | + | chr5.1:18974964-18974983 | None:intergenic | 50.0% |
| ! | TGCGGAGTACTTCTTAAGCC+GGG | - | chr5.1:18975069-18975088 | MS.gene72904:CDS | 50.0% |
| ! | TGCTAGTAACGGGAACACTG+AGG | - | chr5.1:18973541-18973560 | MS.gene72904:intron | 50.0% |
| !! | GCATTTTTCCGATTGGCTCC+TGG | - | chr5.1:18974904-18974923 | MS.gene72904:intron | 50.0% |
| !! | TCATCAGGAACAGAAGCACC+CGG | + | chr5.1:18972252-18972271 | None:intergenic | 50.0% |
| !! | TGATGATGGTCGTTACGAGG+AGG | - | chr5.1:18973809-18973828 | MS.gene72904:intron | 50.0% |
| ATACTGGAGCTGGCGAGCTT+AGG | + | chr5.1:18975327-18975346 | None:intergenic | 55.0% | |
| ATCCCGACTGTTGAGTCCTC+TGG | - | chr5.1:18972893-18972912 | MS.gene72904:CDS | 55.0% | |
| ATTAGGAGACCCCGTCACAC+CGG | + | chr5.1:18972409-18972428 | None:intergenic | 55.0% | |
| ATTGCAGCAGCTGTGTGCTC+AGG | - | chr5.1:18972769-18972788 | MS.gene72904:intron | 55.0% | |
| CCCCAGTGGCTATAATGTCC+AGG | + | chr5.1:18974925-18974944 | None:intergenic | 55.0% | |
| CCGTTGACACTCAACTGCTC+TGG | + | chr5.1:18972972-18972991 | None:intergenic | 55.0% | |
| CTCGTATTTCCGGTGTGACG+GGG | - | chr5.1:18972397-18972416 | MS.gene72904:CDS | 55.0% | |
| CTTCAGCTTGCGTGGAGGTA+AGG | + | chr5.1:18973039-18973058 | None:intergenic | 55.0% | |
| GACTCAGAGGAAAGAGGTGG+TGG | - | chr5.1:18972611-18972630 | MS.gene72904:CDS | 55.0% | |
| GATCCATGAGGCTGTCCATG+AGG | + | chr5.1:18973994-18974013 | None:intergenic | 55.0% | |
| GATGGTCGTTACGAGGAGGA+AGG | - | chr5.1:18973813-18973832 | MS.gene72904:intron | 55.0% | |
| GCATGAGCGAAGGTTGCAAG+TGG | - | chr5.1:18975907-18975926 | MS.gene72904:CDS | 55.0% | |
| GCCTCATGGATCAAGAGACG+AGG | - | chr5.1:18974002-18974021 | MS.gene72904:intron | 55.0% | |
| GCCTCGTCTCTTGATCCATG+AGG | + | chr5.1:18974006-18974025 | None:intergenic | 55.0% | |
| GCGATGGGATCAATGCCTGA+AGG | - | chr5.1:18972792-18972811 | MS.gene72904:intron | 55.0% | |
| GGTGAAGAAGATGCTTCCGC+CGG | - | chr5.1:18972230-18972249 | MS.gene72904:CDS | 55.0% | |
| GTGAAGAAGATGCTTCCGCC+GGG | - | chr5.1:18972231-18972250 | MS.gene72904:CDS | 55.0% | |
| GTTGTTGTCGTGTGCGCGAA+CGG | + | chr5.1:18976201-18976220 | None:intergenic | 55.0% | |
| TGGTTCGCCTTCAGCTTCAC+CGG | - | chr5.1:18972497-18972516 | MS.gene72904:CDS | 55.0% | |
| TTGCAGCAGCTGTGTGCTCA+GGG | - | chr5.1:18972770-18972789 | MS.gene72904:intron | 55.0% | |
| TTGTTGTCGTGTGCGCGAAC+GGG | + | chr5.1:18976200-18976219 | None:intergenic | 55.0% | |
| ! | AATGCCAAGGGCATGAGCGA+AGG | - | chr5.1:18975897-18975916 | MS.gene72904:CDS | 55.0% |
| ! | GCATATTCACGTGTCGCTGC+AGG | + | chr5.1:18974965-18974984 | None:intergenic | 55.0% |
| ! | TCAGAGGAAAGAGGTGGTGG+AGG | - | chr5.1:18972614-18972633 | MS.gene72904:CDS | 55.0% |
| ACCGAAGCCGGTGAAGCTGA+AGG | + | chr5.1:18972507-18972526 | None:intergenic | 60.0% | |
| AGCTGTGTGCTCAGGGCGAT+GGG | - | chr5.1:18972777-18972796 | MS.gene72904:intron | 60.0% | |
| CCAACGTACTCCGGATACGC+CGG | + | chr5.1:18972648-18972667 | None:intergenic | 60.0% | |
| CTACCAGGCTTCAGCTTGCG+TGG | + | chr5.1:18973047-18973066 | None:intergenic | 60.0% | |
| GCAACCTTCGCTCATGCCCT+TGG | + | chr5.1:18975904-18975923 | None:intergenic | 60.0% | |
| GCACCAGACAGCAATGGCAG+CGG | - | chr5.1:18976002-18976021 | MS.gene72904:CDS | 60.0% | |
| GGTTGTGAAGCCGGCGTATC+CGG | - | chr5.1:18972635-18972654 | MS.gene72904:CDS | 60.0% | |
| GTTCCGCTGCCATTGCTGTC+TGG | + | chr5.1:18976008-18976027 | None:intergenic | 60.0% | |
| !! | GCCTTCAGCTTCACCGGCTT+CGG | - | chr5.1:18972503-18972522 | MS.gene72904:CDS | 60.0% |
| !! | GGTGGTGGAGGTTGTGAAGC+CGG | - | chr5.1:18972626-18972645 | MS.gene72904:CDS | 60.0% |
| !! | TCAGGAACAGAAGCACCCGG+CGG | + | chr5.1:18972249-18972268 | None:intergenic | 60.0% |
| CAGCTGTGTGCTCAGGGCGA+TGG | - | chr5.1:18972776-18972795 | MS.gene72904:intron | 65.0% | |
| CCAGGCTTCAGCTTGCGTGG+AGG | + | chr5.1:18973044-18973063 | None:intergenic | 65.0% | |
| CCGGCGTATCCGGAGTACGT+TGG | - | chr5.1:18972645-18972664 | MS.gene72904:CDS | 65.0% | |
| CCTCCACGCAAGCTGAAGCC+TGG | - | chr5.1:18973041-18973060 | MS.gene72904:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 18972195 | 18976466 | 18972195 | ID=MS.gene72904 |
| chr5.1 | mRNA | 18972195 | 18976466 | 18972195 | ID=MS.gene72904.t1;Parent=MS.gene72904 |
| chr5.1 | exon | 18975558 | 18976466 | 18975558 | ID=MS.gene72904.t1.exon1;Parent=MS.gene72904.t1 |
| chr5.1 | CDS | 18975558 | 18976466 | 18975558 | ID=cds.MS.gene72904.t1;Parent=MS.gene72904.t1 |
| chr5.1 | exon | 18975048 | 18975185 | 18975048 | ID=MS.gene72904.t1.exon2;Parent=MS.gene72904.t1 |
| chr5.1 | CDS | 18975048 | 18975185 | 18975048 | ID=cds.MS.gene72904.t1;Parent=MS.gene72904.t1 |
| chr5.1 | exon | 18974792 | 18974896 | 18974792 | ID=MS.gene72904.t1.exon3;Parent=MS.gene72904.t1 |
| chr5.1 | CDS | 18974792 | 18974896 | 18974792 | ID=cds.MS.gene72904.t1;Parent=MS.gene72904.t1 |
| chr5.1 | exon | 18974533 | 18974712 | 18974533 | ID=MS.gene72904.t1.exon4;Parent=MS.gene72904.t1 |
| chr5.1 | CDS | 18974533 | 18974712 | 18974533 | ID=cds.MS.gene72904.t1;Parent=MS.gene72904.t1 |
| chr5.1 | exon | 18974154 | 18974331 | 18974154 | ID=MS.gene72904.t1.exon5;Parent=MS.gene72904.t1 |
| chr5.1 | CDS | 18974154 | 18974331 | 18974154 | ID=cds.MS.gene72904.t1;Parent=MS.gene72904.t1 |
| chr5.1 | exon | 18973571 | 18973818 | 18973571 | ID=MS.gene72904.t1.exon6;Parent=MS.gene72904.t1 |
| chr5.1 | CDS | 18973571 | 18973818 | 18973571 | ID=cds.MS.gene72904.t1;Parent=MS.gene72904.t1 |
| chr5.1 | exon | 18972886 | 18973058 | 18972886 | ID=MS.gene72904.t1.exon7;Parent=MS.gene72904.t1 |
| chr5.1 | CDS | 18972886 | 18973058 | 18972886 | ID=cds.MS.gene72904.t1;Parent=MS.gene72904.t1 |
| chr5.1 | exon | 18972195 | 18972783 | 18972195 | ID=MS.gene72904.t1.exon8;Parent=MS.gene72904.t1 |
| chr5.1 | CDS | 18972195 | 18972783 | 18972195 | ID=cds.MS.gene72904.t1;Parent=MS.gene72904.t1 |
| Gene Sequence |
| Protein sequence |
