Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72939.t1 | XP_003594438.1 | 96.4 | 332 | 12 | 0 | 1 | 332 | 1 | 332 | 1.60E-187 | 665.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72939.t1 | Q9SAH9 | 38.3 | 329 | 190 | 6 | 8 | 333 | 6 | 324 | 1.4e-56 | 221.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72939.t1 | G7IFT8 | 96.4 | 332 | 12 | 0 | 1 | 332 | 1 | 332 | 1.1e-187 | 665.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene85144 | MS.gene72939 | PPI |
| MS.gene76529 | MS.gene72939 | PPI |
| MS.gene058751 | MS.gene72939 | PPI |
| MS.gene058752 | MS.gene72939 | PPI |
| MS.gene50831 | MS.gene72939 | PPI |
| MS.gene36346 | MS.gene72939 | PPI |
| MS.gene50852 | MS.gene72939 | PPI |
| MS.gene069864 | MS.gene72939 | PPI |
| MS.gene009245 | MS.gene72939 | PPI |
| MS.gene50853 | MS.gene72939 | PPI |
| MS.gene50830 | MS.gene72939 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72939.t1 | MTR_2g028620 | 96.386 | 332 | 12 | 0 | 1 | 332 | 1 | 332 | 0.0 | 671 |
| MS.gene72939.t1 | MTR_2g028620 | 96.085 | 281 | 11 | 0 | 1 | 281 | 1 | 281 | 0.0 | 567 |
| MS.gene72939.t1 | MTR_5g072620 | 51.242 | 322 | 149 | 4 | 8 | 326 | 3 | 319 | 2.77e-113 | 331 |
| MS.gene72939.t1 | MTR_3g031650 | 46.749 | 323 | 162 | 4 | 8 | 326 | 3 | 319 | 4.34e-106 | 313 |
| MS.gene72939.t1 | MTR_3g031650 | 47.273 | 275 | 135 | 4 | 8 | 278 | 3 | 271 | 1.45e-88 | 267 |
| MS.gene72939.t1 | MTR_3g005170 | 41.088 | 331 | 181 | 9 | 1 | 325 | 1 | 323 | 8.55e-73 | 228 |
| MS.gene72939.t1 | MTR_3g005210 | 41.538 | 325 | 176 | 9 | 9 | 327 | 5 | 321 | 2.21e-71 | 224 |
| MS.gene72939.t1 | MTR_2g104960 | 41.615 | 322 | 175 | 6 | 8 | 326 | 18 | 329 | 7.58e-71 | 224 |
| MS.gene72939.t1 | MTR_4g006940 | 40.426 | 329 | 183 | 6 | 7 | 332 | 14 | 332 | 1.67e-69 | 220 |
| MS.gene72939.t1 | MTR_4g009040 | 39.144 | 327 | 185 | 6 | 5 | 327 | 8 | 324 | 3.67e-69 | 219 |
| MS.gene72939.t1 | MTR_4g009040 | 38.973 | 331 | 184 | 7 | 5 | 327 | 8 | 328 | 2.06e-67 | 214 |
| MS.gene72939.t1 | MTR_3g005170 | 43.310 | 284 | 147 | 9 | 1 | 278 | 1 | 276 | 5.00e-66 | 209 |
| MS.gene72939.t1 | MTR_4g009690 | 39.755 | 327 | 183 | 6 | 5 | 327 | 8 | 324 | 3.72e-64 | 206 |
| MS.gene72939.t1 | MTR_4g009690 | 40.061 | 327 | 181 | 7 | 5 | 327 | 8 | 323 | 7.84e-64 | 205 |
| MS.gene72939.t1 | MTR_2g101330 | 36.527 | 334 | 194 | 9 | 7 | 332 | 2 | 325 | 4.25e-63 | 203 |
| MS.gene72939.t1 | MTR_8g062440 | 37.838 | 333 | 190 | 10 | 1 | 327 | 1 | 322 | 6.44e-63 | 203 |
| MS.gene72939.t1 | MTR_8g062110 | 38.602 | 329 | 185 | 10 | 1 | 323 | 11 | 328 | 1.63e-62 | 202 |
| MS.gene72939.t1 | MTR_8g062110 | 38.138 | 333 | 189 | 10 | 1 | 327 | 2 | 323 | 1.74e-62 | 202 |
| MS.gene72939.t1 | MTR_4g077100 | 37.612 | 335 | 188 | 11 | 1 | 325 | 1 | 324 | 2.85e-62 | 201 |
| MS.gene72939.t1 | MTR_8g062440 | 37.725 | 334 | 190 | 11 | 1 | 327 | 1 | 323 | 4.49e-62 | 201 |
| MS.gene72939.t1 | MTR_4g006940 | 41.606 | 274 | 148 | 5 | 7 | 278 | 14 | 277 | 2.90e-59 | 192 |
| MS.gene72939.t1 | MTR_4g006940 | 41.606 | 274 | 148 | 5 | 7 | 278 | 14 | 277 | 2.90e-59 | 192 |
| MS.gene72939.t1 | MTR_8g062110 | 41.549 | 284 | 149 | 10 | 1 | 278 | 2 | 274 | 1.86e-58 | 190 |
| MS.gene72939.t1 | MTR_3g005170 | 37.160 | 331 | 163 | 9 | 1 | 325 | 1 | 292 | 2.17e-58 | 190 |
| MS.gene72939.t1 | MTR_8g062110 | 41.549 | 284 | 149 | 10 | 1 | 278 | 2 | 274 | 2.97e-58 | 189 |
| MS.gene72939.t1 | MTR_4g077130 | 35.494 | 324 | 195 | 9 | 8 | 325 | 7 | 322 | 1.91e-57 | 189 |
| MS.gene72939.t1 | MTR_1g022440 | 33.934 | 333 | 197 | 11 | 8 | 328 | 6 | 327 | 2.43e-57 | 189 |
| MS.gene72939.t1 | MTR_4g077100 | 39.583 | 288 | 153 | 11 | 1 | 278 | 1 | 277 | 2.09e-56 | 184 |
| MS.gene72939.t1 | MTR_8g062440 | 40.845 | 284 | 151 | 10 | 1 | 278 | 1 | 273 | 5.43e-56 | 185 |
| MS.gene72939.t1 | MTR_1g022445 | 32.733 | 333 | 201 | 11 | 8 | 328 | 6 | 327 | 1.20e-50 | 171 |
| MS.gene72939.t1 | MTR_5g056600 | 30.841 | 321 | 211 | 5 | 11 | 326 | 5 | 319 | 1.88e-47 | 162 |
| MS.gene72939.t1 | MTR_7g074850 | 33.134 | 335 | 193 | 12 | 10 | 326 | 8 | 329 | 8.10e-45 | 156 |
| MS.gene72939.t1 | MTR_7g074880 | 31.642 | 335 | 195 | 12 | 10 | 326 | 8 | 326 | 2.39e-43 | 152 |
| MS.gene72939.t1 | MTR_7g074820 | 32.836 | 335 | 194 | 12 | 10 | 326 | 8 | 329 | 4.33e-42 | 149 |
| MS.gene72939.t1 | MTR_7g074730 | 32.635 | 334 | 195 | 12 | 10 | 326 | 8 | 328 | 6.25e-42 | 148 |
| MS.gene72939.t1 | MTR_8g062110 | 37.662 | 231 | 137 | 5 | 100 | 327 | 11 | 237 | 2.28e-41 | 144 |
| MS.gene72939.t1 | MTR_4g092080 | 30.814 | 344 | 202 | 14 | 4 | 325 | 8 | 337 | 7.37e-41 | 146 |
| MS.gene72939.t1 | MTR_4g023730 | 30.769 | 338 | 209 | 14 | 4 | 326 | 2 | 329 | 5.24e-40 | 143 |
| MS.gene72939.t1 | MTR_7g074710 | 31.611 | 329 | 203 | 11 | 10 | 326 | 8 | 326 | 1.15e-38 | 140 |
| MS.gene72939.t1 | MTR_8g062110 | 42.857 | 182 | 97 | 5 | 100 | 278 | 11 | 188 | 1.00e-37 | 133 |
| MS.gene72939.t1 | MTR_4g081440 | 28.869 | 336 | 213 | 11 | 11 | 326 | 25 | 354 | 1.35e-35 | 132 |
| MS.gene72939.t1 | MTR_4g081440 | 28.869 | 336 | 212 | 12 | 11 | 326 | 21 | 349 | 7.11e-35 | 130 |
| MS.gene72939.t1 | MTR_7g074870 | 29.932 | 294 | 181 | 10 | 46 | 326 | 7 | 288 | 1.39e-29 | 115 |
| MS.gene72939.t1 | MTR_2g013230 | 31.322 | 348 | 191 | 14 | 6 | 319 | 4 | 337 | 3.33e-28 | 112 |
| MS.gene72939.t1 | MTR_7g117190 | 30.960 | 323 | 187 | 15 | 10 | 306 | 7 | 319 | 7.44e-28 | 111 |
| MS.gene72939.t1 | MTR_7g117190 | 31.399 | 293 | 173 | 12 | 10 | 279 | 7 | 294 | 8.67e-28 | 110 |
| MS.gene72939.t1 | MTR_2g013250 | 30.556 | 324 | 194 | 12 | 6 | 306 | 3 | 318 | 4.65e-26 | 106 |
| MS.gene72939.t1 | MTR_2g013260 | 29.938 | 324 | 188 | 12 | 10 | 306 | 8 | 319 | 1.15e-25 | 105 |
| MS.gene72939.t1 | MTR_2g013260 | 30.068 | 296 | 170 | 11 | 10 | 278 | 8 | 293 | 8.92e-25 | 102 |
| MS.gene72939.t1 | MTR_5g029990 | 30.078 | 256 | 153 | 10 | 10 | 259 | 12 | 247 | 1.24e-22 | 96.3 |
| MS.gene72939.t1 | MTR_0685s0030 | 31.481 | 162 | 109 | 2 | 164 | 325 | 2 | 161 | 1.37e-22 | 92.8 |
| MS.gene72939.t1 | MTR_6g406250 | 28.413 | 271 | 178 | 8 | 9 | 271 | 54 | 316 | 1.54e-22 | 97.1 |
| MS.gene72939.t1 | MTR_0164s0070 | 38.346 | 133 | 74 | 4 | 7 | 135 | 2 | 130 | 2.61e-18 | 82.4 |
| MS.gene72939.t1 | MTR_0685s0030 | 34.783 | 115 | 73 | 2 | 164 | 278 | 2 | 114 | 2.39e-17 | 77.4 |
| MS.gene72939.t1 | MTR_6g406250 | 28.505 | 214 | 143 | 6 | 9 | 216 | 54 | 263 | 3.00e-17 | 80.5 |
| MS.gene72939.t1 | MTR_3g011130 | 40.179 | 112 | 63 | 3 | 108 | 216 | 35 | 145 | 8.89e-17 | 76.6 |
| MS.gene72939.t1 | MTR_3g101500 | 28.295 | 258 | 142 | 13 | 10 | 254 | 4 | 231 | 7.25e-12 | 65.5 |
| MS.gene72939.t1 | MTR_3g101500 | 28.295 | 258 | 142 | 13 | 10 | 254 | 4 | 231 | 1.50e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72939.t1 | AT2G02400 | 63.750 | 320 | 112 | 3 | 7 | 326 | 3 | 318 | 4.07e-158 | 445 |
| MS.gene72939.t1 | AT5G58490 | 51.515 | 330 | 149 | 5 | 1 | 326 | 1 | 323 | 1.93e-114 | 335 |
| MS.gene72939.t1 | AT5G19440 | 40.841 | 333 | 183 | 9 | 1 | 327 | 1 | 325 | 2.58e-72 | 227 |
| MS.gene72939.t1 | AT1G51410 | 40.541 | 333 | 183 | 10 | 1 | 327 | 1 | 324 | 7.87e-72 | 226 |
| MS.gene72939.t1 | AT1G66800 | 37.654 | 324 | 186 | 9 | 8 | 326 | 6 | 318 | 1.67e-65 | 209 |
| MS.gene72939.t1 | AT1G80820 | 39.130 | 322 | 183 | 7 | 8 | 326 | 6 | 317 | 2.76e-64 | 207 |
| MS.gene72939.t1 | AT2G33590 | 39.936 | 313 | 177 | 6 | 10 | 319 | 9 | 313 | 1.70e-63 | 204 |
| MS.gene72939.t1 | AT1G09490 | 36.728 | 324 | 193 | 8 | 8 | 326 | 6 | 322 | 2.01e-63 | 204 |
| MS.gene72939.t1 | AT1G09480 | 37.037 | 324 | 192 | 8 | 8 | 326 | 6 | 322 | 4.04e-63 | 203 |
| MS.gene72939.t1 | AT1G09480 | 37.037 | 324 | 192 | 8 | 8 | 326 | 53 | 369 | 8.26e-63 | 204 |
| MS.gene72939.t1 | AT1G09510 | 37.072 | 321 | 190 | 8 | 8 | 323 | 6 | 319 | 2.80e-62 | 201 |
| MS.gene72939.t1 | AT1G15950 | 38.509 | 322 | 185 | 7 | 8 | 326 | 11 | 322 | 4.71e-61 | 199 |
| MS.gene72939.t1 | AT1G15950 | 38.509 | 322 | 185 | 7 | 8 | 326 | 11 | 322 | 4.71e-61 | 199 |
| MS.gene72939.t1 | AT1G09500 | 37.461 | 323 | 189 | 9 | 8 | 323 | 6 | 322 | 1.19e-60 | 197 |
| MS.gene72939.t1 | AT1G09500 | 40.217 | 276 | 154 | 7 | 8 | 278 | 6 | 275 | 8.31e-59 | 191 |
| MS.gene72939.t1 | AT4G35420 | 35.671 | 328 | 186 | 11 | 10 | 326 | 8 | 321 | 1.31e-58 | 192 |
| MS.gene72939.t1 | AT1G15950 | 38.264 | 311 | 179 | 7 | 8 | 315 | 11 | 311 | 1.20e-57 | 189 |
| MS.gene72939.t1 | AT2G33600 | 38.658 | 313 | 181 | 6 | 10 | 319 | 9 | 313 | 1.45e-57 | 189 |
| MS.gene72939.t1 | AT1G80820 | 39.927 | 273 | 152 | 6 | 8 | 278 | 6 | 268 | 6.64e-55 | 181 |
| MS.gene72939.t1 | AT1G09490 | 36.071 | 280 | 173 | 6 | 49 | 326 | 16 | 291 | 1.42e-53 | 177 |
| MS.gene72939.t1 | AT1G76470 | 37.994 | 329 | 189 | 9 | 7 | 328 | 4 | 324 | 1.45e-53 | 179 |
| MS.gene72939.t1 | AT1G15950 | 39.927 | 273 | 152 | 6 | 8 | 278 | 11 | 273 | 1.81e-53 | 177 |
| MS.gene72939.t1 | AT1G15950 | 39.927 | 273 | 152 | 6 | 8 | 278 | 11 | 273 | 2.14e-53 | 177 |
| MS.gene72939.t1 | AT1G15950 | 38.676 | 287 | 164 | 6 | 8 | 292 | 11 | 287 | 2.67e-53 | 177 |
| MS.gene72939.t1 | AT5G42800 | 33.832 | 334 | 198 | 11 | 5 | 326 | 3 | 325 | 7.65e-52 | 176 |
| MS.gene72939.t1 | AT1G09500 | 36.429 | 280 | 171 | 7 | 48 | 323 | 12 | 288 | 2.09e-50 | 169 |
| MS.gene72939.t1 | AT1G68540 | 29.688 | 320 | 216 | 5 | 12 | 326 | 6 | 321 | 1.01e-44 | 155 |
| MS.gene72939.t1 | AT1G15950 | 39.111 | 225 | 135 | 2 | 103 | 326 | 1 | 224 | 1.62e-40 | 142 |
| MS.gene72939.t1 | AT1G25460 | 29.375 | 320 | 215 | 8 | 12 | 326 | 6 | 319 | 4.60e-39 | 140 |
| MS.gene72939.t1 | AT1G61720 | 31.065 | 338 | 199 | 14 | 11 | 327 | 14 | 338 | 9.67e-38 | 137 |
| MS.gene72939.t1 | AT2G23910 | 29.825 | 285 | 179 | 10 | 1 | 278 | 1 | 271 | 2.99e-35 | 129 |
| MS.gene72939.t1 | AT2G23910 | 30.526 | 285 | 177 | 11 | 1 | 278 | 1 | 271 | 3.31e-35 | 129 |
| MS.gene72939.t1 | AT2G23910 | 29.825 | 285 | 179 | 10 | 1 | 278 | 1 | 271 | 4.33e-35 | 130 |
| MS.gene72939.t1 | AT4G27250 | 32.353 | 272 | 159 | 8 | 4 | 255 | 7 | 273 | 7.43e-35 | 130 |
| MS.gene72939.t1 | AT2G45400 | 31.085 | 341 | 197 | 14 | 9 | 326 | 39 | 364 | 1.13e-34 | 130 |
| MS.gene72939.t1 | AT4G27250 | 32.955 | 264 | 158 | 8 | 4 | 255 | 7 | 263 | 2.10e-34 | 129 |
| MS.gene72939.t1 | AT2G45400 | 32.872 | 289 | 167 | 11 | 9 | 280 | 39 | 317 | 2.32e-33 | 125 |
| MS.gene72939.t1 | AT4G30470 | 28.369 | 282 | 186 | 8 | 1 | 278 | 1 | 270 | 1.18e-32 | 123 |
| MS.gene72939.t1 | AT2G23910 | 31.416 | 226 | 139 | 8 | 58 | 278 | 23 | 237 | 3.30e-29 | 113 |
| MS.gene72939.t1 | AT1G68540 | 29.858 | 211 | 146 | 2 | 117 | 326 | 5 | 214 | 1.01e-28 | 110 |
| MS.gene72939.t1 | AT2G45400 | 29.677 | 310 | 188 | 12 | 35 | 326 | 10 | 307 | 1.20e-25 | 104 |
| MS.gene72939.t1 | AT2G45400 | 33.036 | 224 | 128 | 9 | 9 | 218 | 39 | 254 | 2.59e-22 | 94.7 |
| MS.gene72939.t1 | AT5G14700 | 26.408 | 284 | 190 | 8 | 1 | 272 | 46 | 322 | 3.11e-22 | 96.3 |
| MS.gene72939.t1 | AT5G14700 | 26.606 | 218 | 147 | 6 | 1 | 209 | 46 | 259 | 5.40e-16 | 77.4 |
| MS.gene72939.t1 | AT4G33360 | 27.027 | 296 | 163 | 15 | 3 | 278 | 8 | 270 | 8.20e-13 | 68.6 |
| MS.gene72939.t1 | AT4G33360 | 27.027 | 296 | 163 | 16 | 3 | 278 | 8 | 270 | 1.71e-12 | 67.8 |
| MS.gene72939.t1 | AT4G33360 | 27.336 | 289 | 157 | 16 | 10 | 278 | 3 | 258 | 1.85e-12 | 67.8 |
Find 0 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACCAAAAATTAATATTAATC+CGG | + | 15006:10547-10566 | MS.gene72939:intron | 15.0% |
| !! | ATAAAAAATCAATAGACAAT+TGG | + | 15006:9511-9530 | MS.gene72939:intron | 15.0% |
| !! | TATTATTTATTGAAACTCTT+CGG | + | 15006:9183-9202 | MS.gene72939:intron | 15.0% |
| !!! | AAAATTGATTTTTAGTGAAT+TGG | - | 15006:8168-8187 | MS.gene72939:intergenic | 15.0% |
| !!! | AACTACTTTTTAAATCTTTT+AGG | - | 15006:8910-8929 | MS.gene72939:intergenic | 15.0% |
| !!! | ATTAAAATCACTTTTAGATT+AGG | + | 15006:8848-8867 | MS.gene72939:intron | 15.0% |
| !!! | TAAAAATCAATTTTTGTCAA+CGG | + | 15006:8174-8193 | MS.gene72939:intron | 15.0% |
| !!! | TTATTTTATGCAATTAAGAT+CGG | + | 15006:10483-10502 | MS.gene72939:intron | 15.0% |
| !! | AGAATAGATAATTGTATGTT+TGG | - | 15006:8204-8223 | MS.gene72939:intergenic | 20.0% |
| !! | ATGATAAATCTAGATTTGAA+TGG | - | 15006:10177-10196 | MS.gene72939:intergenic | 20.0% |
| !! | TATTACATATGTGATGTAAA+AGG | + | 15006:9765-9784 | MS.gene72939:intron | 20.0% |
| !! | TTATATATCATTCAAAGTAG+CGG | - | 15006:9639-9658 | MS.gene72939:intergenic | 20.0% |
| !!! | AATATTAATTTTTGGTATCC+AGG | - | 15006:10543-10562 | MS.gene72939:intergenic | 20.0% |
| !!! | AATGTTATTTCTATGATGAA+TGG | - | 15006:8771-8790 | MS.gene72939:intergenic | 20.0% |
| !!! | ACCGGATTAATATTAATTTT+TGG | - | 15006:10551-10570 | MS.gene72939:intergenic | 20.0% |
| !!! | AGAAATAACATTTGTTTCTT+TGG | + | 15006:8779-8798 | MS.gene72939:intron | 20.0% |
| !!! | AGTTTAAACTTTAAAGCATT+GGG | + | 15006:9417-9436 | MS.gene72939:intron | 20.0% |
| ! | AAGAACTTAACAGAGATATT+TGG | + | 15006:9293-9312 | MS.gene72939:intron | 25.0% |
| ! | AATAAGTTATTGAGAAAAGC+CGG | + | 15006:9799-9818 | MS.gene72939:intron | 25.0% |
| ! | AGAACTTAACAGAGATATTT+GGG | + | 15006:9294-9313 | MS.gene72939:intron | 25.0% |
| ! | ATGTTCAATAAAGAAGTGAT+AGG | - | 15006:10395-10414 | MS.gene72939:intergenic | 25.0% |
| ! | CACTTCTTTATTGAACATAT+GGG | + | 15006:10397-10416 | MS.gene72939:intron | 25.0% |
| ! | GAAAACAGTTCAACATATTT+GGG | + | 15006:10243-10262 | MS.gene72939:intron | 25.0% |
| ! | GTAGTTAAGTCAAACAAATA+CGG | + | 15006:8924-8943 | MS.gene72939:intron | 25.0% |
| ! | GTTAAGTTCTTCTTTAGATA+AGG | - | 15006:9284-9303 | MS.gene72939:intergenic | 25.0% |
| ! | TCACAATAGAAATCAATCTT+TGG | + | 15006:9727-9746 | MS.gene72939:intron | 25.0% |
| ! | TCACTTCTTTATTGAACATA+TGG | + | 15006:10396-10415 | MS.gene72939:intron | 25.0% |
| ! | TCTAAATTAATCATTTGCCA+TGG | - | 15006:10423-10442 | MS.gene72939:intergenic | 25.0% |
| ! | TGAAAACAGTTCAACATATT+TGG | + | 15006:10242-10261 | MS.gene72939:intron | 25.0% |
| ! | TGTTCAATAAAGAAGTGATA+GGG | - | 15006:10394-10413 | MS.gene72939:intergenic | 25.0% |
| ! | TTGTTGTATGTTGTGTTTAT+GGG | + | 15006:9216-9235 | MS.gene72939:intron | 25.0% |
| ! | TTTAAGAAACTGATGTTGTT+TGG | - | 15006:9922-9941 | MS.gene72939:intergenic | 25.0% |
| ! | TTTCTATTGTGATCTATGAT+TGG | - | 15006:9719-9738 | MS.gene72939:intergenic | 25.0% |
| !! | TACAGCTATAGAATCAATTT+TGG | - | 15006:7952-7971 | MS.gene72939:intergenic | 25.0% |
| !! | TTTGTTGTATGTTGTGTTTA+TGG | + | 15006:9215-9234 | MS.gene72939:intron | 25.0% |
| !! | TTTTCCTTTCCTTTTTCTAT+TGG | + | 15006:9366-9385 | MS.gene72939:intron | 25.0% |
| !!! | AGTAATATTGAAAGCACTAA+CGG | + | 15006:9487-9506 | MS.gene72939:intron | 25.0% |
| !!! | ATAAGTTTTGTGAGATTGTT+TGG | - | 15006:7859-7878 | MS.gene72939:intergenic | 25.0% |
| !!! | GAGTTTAAACTTTAAAGCAT+TGG | + | 15006:9416-9435 | MS.gene72939:intron | 25.0% |
| !!! | TCTCTTTTCTCTTTTAAAAC+TGG | - | 15006:9878-9897 | MS.gene72939:intergenic | 25.0% |
| !!! | TGGGTTTTGTTTTGATAATA+GGG | - | 15006:7351-7370 | MS.gene72939:intergenic | 25.0% |
| !!! | TTTGTTTTTGAAGCGAATTA+AGG | + | 15006:9664-9683 | MS.gene72939:intron | 25.0% |
| AACAAACTAACCTGTGAATA+GGG | - | 15006:8701-8720 | MS.gene72939:intergenic | 30.0% | |
| AACAAGAAGAGAACATAACA+TGG | - | 15006:8743-8762 | MS.gene72939:intergenic | 30.0% | |
| AACACAACATACAACAAAGA+TGG | - | 15006:9213-9232 | MS.gene72939:intergenic | 30.0% | |
| AACATCAGTTTCTTAAACCT+AGG | + | 15006:9925-9944 | MS.gene72939:intron | 30.0% | |
| AGTTCTTCTTTAGATAAGGT+TGG | - | 15006:9280-9299 | MS.gene72939:intergenic | 30.0% | |
| CTGTAATAATTTCAGCCATT+GGG | - | 15006:10318-10337 | MS.gene72939:intergenic | 30.0% | |
| GGTAGATATCTTTGTGTAAA+TGG | + | 15006:8621-8640 | MS.gene72939:CDS | 30.0% | |
| GTTCAATAAAGAAGTGATAG+GGG | - | 15006:10393-10412 | MS.gene72939:intergenic | 30.0% | |
| TATAAATCTCTGCTCTTACT+TGG | - | 15006:10009-10028 | MS.gene72939:intergenic | 30.0% | |
| TCTGTAATAATTTCAGCCAT+TGG | - | 15006:10319-10338 | MS.gene72939:intergenic | 30.0% | |
| TTCAATAAAGAAGTGATAGG+GGG | - | 15006:10392-10411 | MS.gene72939:intergenic | 30.0% | |
| TTTAGAGAAAAGTGATGCTA+TGG | + | 15006:10437-10456 | MS.gene72939:intron | 30.0% | |
| ! | ACCTTTGCATTAGATTTTTC+CGG | - | 15006:9821-9840 | MS.gene72939:intergenic | 30.0% |
| ! | ATGAGTTGGATCAAGAAAAA+GGG | + | 15006:10275-10294 | MS.gene72939:intron | 30.0% |
| ! | GTACAATTCAGAGACAATTT+TGG | - | 15006:8670-8689 | MS.gene72939:intergenic | 30.0% |
| !! | AGCTTTTCAGCTTTTTCTTT+TGG | + | 15006:10140-10159 | MS.gene72939:intron | 30.0% |
| !! | GTAATATTGAAAGCACTAAC+GGG | + | 15006:9488-9507 | MS.gene72939:intron | 30.0% |
| !! | TACTGGTTGCTATTACTTTT+TGG | + | 15006:10088-10107 | MS.gene72939:intron | 30.0% |
| !!! | GTGGGTTTTGTTTTGATAAT+AGG | - | 15006:7352-7371 | MS.gene72939:intergenic | 30.0% |
| !!! | TTTTTGAAGCGAATTAAGGA+AGG | + | 15006:9668-9687 | MS.gene72939:intron | 30.0% |
| AACATATAGCAATGCCTGTT+TGG | - | 15006:7910-7929 | MS.gene72939:intergenic | 35.0% | |
| AAGAATCTATCTATGCAGTG+TGG | + | 15006:10039-10058 | MS.gene72939:intron | 35.0% | |
| AAGAGAACATAACATGGCAT+GGG | - | 15006:8737-8756 | MS.gene72939:intergenic | 35.0% | |
| ACAGAAGAATAGTGCTAACA+AGG | - | 15006:10344-10363 | MS.gene72939:intergenic | 35.0% | |
| ACCAGTATATGTTCACTCAA+TGG | - | 15006:10075-10094 | MS.gene72939:intergenic | 35.0% | |
| AGATTTATCATCATCACGCA+GGG | + | 15006:10186-10205 | MS.gene72939:intron | 35.0% | |
| AGCTTCAGTCCAATAGAAAA+AGG | - | 15006:9378-9397 | MS.gene72939:intergenic | 35.0% | |
| CAACAAACTAACCTGTGAAT+AGG | - | 15006:8702-8721 | MS.gene72939:intergenic | 35.0% | |
| CAGTCCAATAGAAAAAGGAA+AGG | - | 15006:9373-9392 | MS.gene72939:intergenic | 35.0% | |
| CAGTTTCTTAAACCTAGGTT+TGG | + | 15006:9930-9949 | MS.gene72939:intron | 35.0% | |
| CATTGGGAAACAATACAATG+GGG | - | 15006:10302-10321 | MS.gene72939:intergenic | 35.0% | |
| CCAGTATATGTTCACTCAAT+GGG | - | 15006:10074-10093 | MS.gene72939:intergenic | 35.0% | |
| CCATTGGGAAACAATACAAT+GGG | - | 15006:10303-10322 | MS.gene72939:intergenic | 35.0% | |
| CCTATTTCATGTAGGAAAAC+AGG | + | 15006:10513-10532 | MS.gene72939:intron | 35.0% | |
| GCTGTAGAGTATAACAAGTT+TGG | + | 15006:7966-7985 | MS.gene72939:intron | 35.0% | |
| GGTTGACACTATTACAAAGA+TGG | - | 15006:9259-9278 | MS.gene72939:intergenic | 35.0% | |
| GTTAGCTACCTATTTCATGT+AGG | + | 15006:10505-10524 | MS.gene72939:intron | 35.0% | |
| TAGATTTATCATCATCACGC+AGG | + | 15006:10185-10204 | MS.gene72939:intron | 35.0% | |
| TATGAATGAGAACAGTACCA+TGG | - | 15006:7675-7694 | MS.gene72939:intergenic | 35.0% | |
| TATGTTTGCGTTCACTTCTA+CGG | + | 15006:7924-7943 | MS.gene72939:intron | 35.0% | |
| TATTACTTCTCAATCACCAC+AGG | - | 15006:9474-9493 | MS.gene72939:intergenic | 35.0% | |
| TCAAATCAGTCAATCCAAAC+AGG | + | 15006:7893-7912 | MS.gene72939:intron | 35.0% | |
| TCAATAAAGAAGTGATAGGG+GGG | - | 15006:10391-10410 | MS.gene72939:intergenic | 35.0% | |
| TCTCTGATAGCATCTTGAAT+GGG | - | 15006:10773-10792 | MS.gene72939:intergenic | 35.0% | |
| TTCTCTGATAGCATCTTGAA+TGG | - | 15006:10774-10793 | MS.gene72939:intergenic | 35.0% | |
| TTTATTGAACATATGGGCCA+TGG | + | 15006:10403-10422 | MS.gene72939:intron | 35.0% | |
| ! | AAACCAGGTTGAGTTTCATT+GGG | - | 15006:10695-10714 | MS.gene72939:intergenic | 35.0% |
| ! | ACTAGCTAAAAGTGAGTTGA+AGG | - | 15006:8130-8149 | MS.gene72939:intergenic | 35.0% |
| ! | ATGTTGAGTACTGTAAGTTG+AGG | + | 15006:8331-8350 | MS.gene72939:CDS | 35.0% |
| ! | CATGAGTTGGATCAAGAAAA+AGG | + | 15006:10274-10293 | MS.gene72939:intron | 35.0% |
| ! | CCTGTTTTCCTACATGAAAT+AGG | - | 15006:10516-10535 | MS.gene72939:intergenic | 35.0% |
| ! | GACATTTTGTCTTGATGAAG+TGG | + | 15006:9578-9597 | MS.gene72939:intron | 35.0% |
| ! | TGTTGAGTACTGTAAGTTGA+GGG | + | 15006:8332-8351 | MS.gene72939:CDS | 35.0% |
| !! | TAGAAGTTCCTTTTGAGGAT+CGG | - | 15006:7564-7583 | MS.gene72939:intergenic | 35.0% |
| !! | TTAAAGCATTGGGTGATGAT+TGG | + | 15006:9427-9446 | MS.gene72939:intron | 35.0% |
| !! | TTCATCTGATTCTGAAGCAA+CGG | - | 15006:8468-8487 | MS.gene72939:intergenic | 35.0% |
| AAATAACCTACTGCACGTGA+GGG | + | 15006:9043-9062 | MS.gene72939:intron | 40.0% | |
| AACAGGTACCAAACCCTAAT+TGG | + | 15006:8271-8290 | MS.gene72939:intron | 40.0% | |
| AACCTGTGAATAGGGAAATC+AGG | - | 15006:8693-8712 | MS.gene72939:intergenic | 40.0% | |
| ACCTGTGAATAGGGAAATCA+GGG | - | 15006:8692-8711 | MS.gene72939:intergenic | 40.0% | |
| ATGTTTGCGTTCACTTCTAC+GGG | + | 15006:7925-7944 | MS.gene72939:intron | 40.0% | |
| CAAGTAAATTTGTCCCCAAC+AGG | + | 15006:8254-8273 | MS.gene72939:intron | 40.0% | |
| CACAGGCTTGTAATAGCTAA+AGG | - | 15006:9457-9476 | MS.gene72939:intergenic | 40.0% | |
| CCCATTGAGTGAACATATAC+TGG | + | 15006:10071-10090 | MS.gene72939:intron | 40.0% | |
| CCCATTGTATTGTTTCCCAA+TGG | + | 15006:10300-10319 | MS.gene72939:intron | 40.0% | |
| CCCTATCTTCTTTGCTAGTT+CGG | - | 15006:9076-9095 | MS.gene72939:intergenic | 40.0% | |
| CCGAACTAGCAAAGAAGATA+GGG | + | 15006:9073-9092 | MS.gene72939:intron | 40.0% | |
| CCTATCTTCTTTGCTAGTTC+GGG | - | 15006:9075-9094 | MS.gene72939:intergenic | 40.0% | |
| CTTTAGCTATTACAAGCCTG+TGG | + | 15006:9455-9474 | MS.gene72939:intron | 40.0% | |
| GAAAAGCTCAAGAGACATCT+AGG | - | 15006:10128-10147 | MS.gene72939:intergenic | 40.0% | |
| GAAGAGAACATAACATGGCA+TGG | - | 15006:8738-8757 | MS.gene72939:intergenic | 40.0% | |
| GATTTATCATCATCACGCAG+GGG | + | 15006:10187-10206 | MS.gene72939:intron | 40.0% | |
| GCCATTGGGAAACAATACAA+TGG | - | 15006:10304-10323 | MS.gene72939:intergenic | 40.0% | |
| GCCGGAAAAATCTAATGCAA+AGG | + | 15006:9817-9836 | MS.gene72939:intron | 40.0% | |
| GTTTATGTGCAGAATGCAGA+TGG | + | 15006:9129-9148 | MS.gene72939:intron | 40.0% | |
| TAAATAACCTACTGCACGTG+AGG | + | 15006:9042-9061 | MS.gene72939:intron | 40.0% | |
| TCAGATGAATGCAAGTTCTG+CGG | + | 15006:8479-8498 | MS.gene72939:CDS | 40.0% | |
| TGATGAAGTGGCTGTAATCT+TGG | + | 15006:9590-9609 | MS.gene72939:intron | 40.0% | |
| TGGTTTGACACCATGTAAAG+AGG | + | 15006:10709-10728 | MS.gene72939:CDS | 40.0% | |
| ! | AACCAGGTTGAGTTTCATTG+GGG | - | 15006:10694-10713 | MS.gene72939:intergenic | 40.0% |
| ! | AATTAGGGTTTGGTACCTGT+TGG | - | 15006:8272-8291 | MS.gene72939:intergenic | 40.0% |
| ! | ATGAGTTTGGTTCCAAACCT+AGG | - | 15006:9945-9964 | MS.gene72939:intergenic | 40.0% |
| ! | ATTAGGGTTTGGTACCTGTT+GGG | - | 15006:8271-8290 | MS.gene72939:intergenic | 40.0% |
| ! | CAAACCAGGTTGAGTTTCAT+TGG | - | 15006:10696-10715 | MS.gene72939:intergenic | 40.0% |
| ! | GTTGAGTACTGTAAGTTGAG+GGG | + | 15006:8333-8352 | MS.gene72939:CDS | 40.0% |
| ! | TCTTTACATGGTGTCAAACC+AGG | - | 15006:10710-10729 | MS.gene72939:intergenic | 40.0% |
| ! | TGTTGCTAGAGCTCATGTTT+TGG | + | 15006:8575-8594 | MS.gene72939:CDS | 40.0% |
| ! | TTGAGTACTGTAAGTTGAGG+GGG | + | 15006:8334-8353 | MS.gene72939:CDS | 40.0% |
| ! | TTGGGTTCAAAAGCATGAGT+TGG | + | 15006:10261-10280 | MS.gene72939:intron | 40.0% |
| !! | ACACAGGAGTGTTATTGGTT+GGG | + | 15006:8534-8553 | MS.gene72939:CDS | 40.0% |
| !! | AGGATACACAGGAGTGTTAT+TGG | + | 15006:8529-8548 | MS.gene72939:CDS | 40.0% |
| !! | GAGTTTTGTGAGAAACATGG+CGG | + | 15006:8402-8421 | MS.gene72939:CDS | 40.0% |
| !! | TACACAGGAGTGTTATTGGT+TGG | + | 15006:8533-8552 | MS.gene72939:CDS | 40.0% |
| !! | TGGGAGTTTTGTGAGAAACA+TGG | + | 15006:8399-8418 | MS.gene72939:CDS | 40.0% |
| !! | TGTTGCAGAGGTTGATGATA+GGG | + | 15006:8502-8521 | MS.gene72939:CDS | 40.0% |
| !!! | GGTTCTAGAAGTTCCTTTTG+AGG | - | 15006:7569-7588 | MS.gene72939:intergenic | 40.0% |
| AAGCGAAAACAGAGAAGAGG+TGG | + | 15006:7277-7296 | MS.gene72939:CDS | 45.0% | |
| ACCCTGATTTCCCTATTCAC+AGG | + | 15006:8688-8707 | MS.gene72939:CDS | 45.0% | |
| AGATATCTACCAGCAGCAGT+TGG | - | 15006:8612-8631 | MS.gene72939:intergenic | 45.0% | |
| AGATGAGATGGGTCGGAATT+GGG | - | 15006:7401-7420 | MS.gene72939:intergenic | 45.0% | |
| AGCAAGGAGGCTAATAGACT+TGG | + | 15006:10733-10752 | MS.gene72939:CDS | 45.0% | |
| CCACAGCTACTAGAAACGTT+CGG | - | 15006:9019-9038 | MS.gene72939:intergenic | 45.0% | |
| CCATATTCTAGACTGCTTCC+CGG | - | 15006:8990-9009 | MS.gene72939:intergenic | 45.0% | |
| CCCGAACTAGCAAAGAAGAT+AGG | + | 15006:9072-9091 | MS.gene72939:intron | 45.0% | |
| CTACTCCATAGCAGCACATT+TGG | - | 15006:9979-9998 | MS.gene72939:intergenic | 45.0% | |
| CTGTCCTATAGTCGTCTATC+CGG | + | 15006:8968-8987 | MS.gene72939:intron | 45.0% | |
| GAACAGTACCATGGCTGAAA+TGG | - | 15006:7666-7685 | MS.gene72939:intergenic | 45.0% | |
| GACAAGCGAAAACAGAGAAG+AGG | + | 15006:7274-7293 | MS.gene72939:CDS | 45.0% | |
| GACGACTATAGGACAGAACT+AGG | - | 15006:8964-8983 | MS.gene72939:intergenic | 45.0% | |
| GCAAGGAGGCTAATAGACTT+GGG | + | 15006:10734-10753 | MS.gene72939:CDS | 45.0% | |
| GGAGCTGGCAAATATGAGTT+TGG | - | 15006:9958-9977 | MS.gene72939:intergenic | 45.0% | |
| GGAGTGTGAAGAGATGAGAT+GGG | - | 15006:7412-7431 | MS.gene72939:intergenic | 45.0% | |
| GTGGTATCCCGTGTCAAAAA+CGG | + | 15006:8359-8378 | MS.gene72939:CDS | 45.0% | |
| GTTAAGCGTTCCTTGTACAG+CGG | - | 15006:7591-7610 | MS.gene72939:intergenic | 45.0% | |
| TACATCCTCCATTTCAGCCA+TGG | + | 15006:7655-7674 | MS.gene72939:CDS | 45.0% | |
| TGGAGTGTGAAGAGATGAGA+TGG | - | 15006:7413-7432 | MS.gene72939:intergenic | 45.0% | |
| TGTAGGAAAACAGGACAACC+TGG | + | 15006:10522-10541 | MS.gene72939:intron | 45.0% | |
| TGTCCTATAGTCGTCTATCC+GGG | + | 15006:8969-8988 | MS.gene72939:intron | 45.0% | |
| TGTGAAGAGATGAGATGGGT+CGG | - | 15006:7408-7427 | MS.gene72939:intergenic | 45.0% | |
| TGTTTGCGTTCACTTCTACG+GGG | + | 15006:7926-7945 | MS.gene72939:intron | 45.0% | |
| TTAAGCGTTCCTTGTACAGC+GGG | - | 15006:7590-7609 | MS.gene72939:intergenic | 45.0% | |
| TTCCCCAATGAAACTCAACC+TGG | + | 15006:10689-10708 | MS.gene72939:CDS | 45.0% | |
| ! | GAAGATGGTGATGCGAGATT+GGG | - | 15006:7444-7463 | MS.gene72939:intergenic | 45.0% |
| ! | TGGCGTGGATTTTGTAGTGT+GGG | - | 15006:7370-7389 | MS.gene72939:intergenic | 45.0% |
| ! | TTAGGGTTTGGTACCTGTTG+GGG | - | 15006:8270-8289 | MS.gene72939:intergenic | 45.0% |
| ! | TTTTCCGGCCAATTAGGGTT+TGG | - | 15006:8282-8301 | MS.gene72939:intergenic | 45.0% |
| !! | AGTTCCTTTTGAGGATCGGT+TGG | - | 15006:7560-7579 | MS.gene72939:intergenic | 45.0% |
| !! | CGAACGTTTCTAGTAGCTGT+GGG | + | 15006:9017-9036 | MS.gene72939:intron | 45.0% |
| !! | GTGTTGCAGAGGTTGATGAT+AGG | + | 15006:8501-8520 | MS.gene72939:CDS | 45.0% |
| !! | GTTCCTTTTGAGGATCGGTT+GGG | - | 15006:7559-7578 | MS.gene72939:intergenic | 45.0% |
| !! | GTTGCAGAGGTTGATGATAG+GGG | + | 15006:8503-8522 | MS.gene72939:CDS | 45.0% |
| !!! | CCTTGTTTTCCGGCCAATTA+GGG | - | 15006:8287-8306 | MS.gene72939:intergenic | 45.0% |
| !! | ATTTAATTAAAAAATTTAAC+CGG | - | 15006:10569-10588 | MS.gene72939:intergenic | 5.0% |
| !! | TATAGAATTATAATAAAAAA+TGG | - | 15006:9100-9119 | MS.gene72939:intergenic | 5.0% |
| AAAAACGGAGGCAGAGAAGG+CGG | + | 15006:8374-8393 | MS.gene72939:CDS | 50.0% | |
| AAAACAAGGCGATCGACGAG+GGG | + | 15006:8298-8317 | MS.gene72939:CDS | 50.0% | |
| AACGCCATGAACGGTTGTTC+CGG | + | 15006:7497-7516 | MS.gene72939:CDS | 50.0% | |
| AATTGGGGAAGATTGTGGCG+TGG | - | 15006:7385-7404 | MS.gene72939:intergenic | 50.0% | |
| ACCGTTCATGGCGTTTGAGA+CGG | - | 15006:7492-7511 | MS.gene72939:intergenic | 50.0% | |
| AGAAGCAGCAGAGAGCCTTA+TGG | + | 15006:10790-10809 | MS.gene72939:CDS | 50.0% | |
| AGACCCAACCGATCCTCAAA+AGG | + | 15006:7553-7572 | MS.gene72939:CDS | 50.0% | |
| CAAACGGCTTCATCGGATCA+TGG | + | 15006:7315-7334 | MS.gene72939:CDS | 50.0% | |
| CACCATGTAAAGAGGCAGCA+AGG | + | 15006:10717-10736 | MS.gene72939:CDS | 50.0% | |
| CAGTACCATGGCTGAAATGG+AGG | - | 15006:7663-7682 | MS.gene72939:intergenic | 50.0% | |
| CATGTAAAGAGGCAGCAAGG+AGG | + | 15006:10720-10739 | MS.gene72939:CDS | 50.0% | |
| CCCTAATTGGCCGGAAAACA+AGG | + | 15006:8284-8303 | MS.gene72939:CDS | 50.0% | |
| CTAGAAGCAGCAAAACGCGT+GGG | + | 15006:7614-7633 | MS.gene72939:CDS | 50.0% | |
| CTCCTTGCTGCCTCTTTACA+TGG | - | 15006:10722-10741 | MS.gene72939:intergenic | 50.0% | |
| CTTCCCGGATAGACGACTAT+AGG | - | 15006:8975-8994 | MS.gene72939:intergenic | 50.0% | |
| GAAAACAAGGCGATCGACGA+GGG | + | 15006:8297-8316 | MS.gene72939:CDS | 50.0% | |
| GAAGAGGTGGTATGCGTAAC+CGG | + | 15006:7290-7309 | MS.gene72939:CDS | 50.0% | |
| GAGATGAGATGGGTCGGAAT+TGG | - | 15006:7402-7421 | MS.gene72939:intergenic | 50.0% | |
| GAGGATGTTAACGGGGAAGA+TGG | - | 15006:7459-7478 | MS.gene72939:intergenic | 50.0% | |
| GATAGGGGAGAAGGATACAC+AGG | + | 15006:8518-8537 | MS.gene72939:CDS | 50.0% | |
| GATGAGATGGGTCGGAATTG+GGG | - | 15006:7400-7419 | MS.gene72939:intergenic | 50.0% | |
| GCAGGAAGCCTTTAGCCATA+AGG | - | 15006:10808-10827 | MS.gene72939:intergenic | 50.0% | |
| GGTACCAAACCCTAATTGGC+CGG | + | 15006:8275-8294 | MS.gene72939:intron | 50.0% | |
| GGTGGAGTCGAGGATGTTAA+CGG | - | 15006:7468-7487 | MS.gene72939:intergenic | 50.0% | |
| GTATCCCGTGTCAAAAACGG+AGG | + | 15006:8362-8381 | MS.gene72939:CDS | 50.0% | |
| GTATGCGTAACCGGAGCAAA+CGG | + | 15006:7299-7318 | MS.gene72939:CDS | 50.0% | |
| GTCAAAAACGGAGGCAGAGA+AGG | + | 15006:8371-8390 | MS.gene72939:CDS | 50.0% | |
| GTCGGAATTGGGGAAGATTG+TGG | - | 15006:7390-7409 | MS.gene72939:intergenic | 50.0% | |
| GTGGAGTCGAGGATGTTAAC+GGG | - | 15006:7467-7486 | MS.gene72939:intergenic | 50.0% | |
| TATGAGACTCCAACTGCTGC+TGG | + | 15006:8600-8619 | MS.gene72939:CDS | 50.0% | |
| TCTAGAAGCAGCAAAACGCG+TGG | + | 15006:7613-7632 | MS.gene72939:CDS | 50.0% | |
| TCTTTACCCTCACGTGCAGT+AGG | - | 15006:9052-9071 | MS.gene72939:intergenic | 50.0% | |
| TGGAGTCGAGGATGTTAACG+GGG | - | 15006:7466-7485 | MS.gene72939:intergenic | 50.0% | |
| TTGTGAGAAACATGGCGGTG+TGG | + | 15006:8407-8426 | MS.gene72939:CDS | 50.0% | |
| ! | ACTGTAAGTTGAGGGGGAAG+TGG | + | 15006:8340-8359 | MS.gene72939:CDS | 50.0% |
| ! | CAGCTCCAAATGTGCTGCTA+TGG | + | 15006:9971-9990 | MS.gene72939:intron | 50.0% |
| ! | CATAGCAGCACATTTGGAGC+TGG | - | 15006:9973-9992 | MS.gene72939:intergenic | 50.0% |
| ! | CCGGGAAGCAGTCTAGAATA+TGG | + | 15006:8987-9006 | MS.gene72939:intron | 50.0% |
| ! | GCAGAGAGCCTTATGGCTAA+AGG | + | 15006:10797-10816 | MS.gene72939:CDS | 50.0% |
| ! | GGAAGATGGTGATGCGAGAT+TGG | - | 15006:7445-7464 | MS.gene72939:intergenic | 50.0% |
| ! | GTGGCGTGGATTTTGTAGTG+TGG | - | 15006:7371-7390 | MS.gene72939:intergenic | 50.0% |
| ! | GTTCATCCGGGGACTTGTTT+GGG | + | 15006:8441-8460 | MS.gene72939:CDS | 50.0% |
| ! | TGTGCTGCTATGGAGTAGTG+CGG | + | 15006:9981-10000 | MS.gene72939:intron | 50.0% |
| ! | TTCATCCGGGGACTTGTTTG+GGG | + | 15006:8442-8461 | MS.gene72939:CDS | 50.0% |
| ! | TTGGGTCTTCGAGAGTGCAT+GGG | - | 15006:7541-7560 | MS.gene72939:intergenic | 50.0% |
| !! | CCGAACGTTTCTAGTAGCTG+TGG | + | 15006:9016-9035 | MS.gene72939:intron | 50.0% |
| !! | CTCTGCCTCCGTTTTTGACA+CGG | - | 15006:8370-8389 | MS.gene72939:intergenic | 50.0% |
| !! | CTTCTAGAACCCGCTGTACA+AGG | + | 15006:7578-7597 | MS.gene72939:CDS | 50.0% |
| !! | GAGGTTGATGATAGGGGAGA+AGG | + | 15006:8509-8528 | MS.gene72939:CDS | 50.0% |
| !! | TCTGCCTCCGTTTTTGACAC+GGG | - | 15006:8369-8388 | MS.gene72939:intergenic | 50.0% |
| !!! | GCCTTGTTTTCCGGCCAATT+AGG | - | 15006:8288-8307 | MS.gene72939:intergenic | 50.0% |
| !!! | TCGTCGATCGCCTTGTTTTC+CGG | - | 15006:8297-8316 | MS.gene72939:intergenic | 50.0% |
| ACCGGAGCAAACGGCTTCAT+CGG | + | 15006:7308-7327 | MS.gene72939:CDS | 55.0% | |
| ATGTGGTTGCGGTTCATCCG+GGG | + | 15006:8430-8449 | MS.gene72939:CDS | 55.0% | |
| GAAACATGGCGGTGTGGATG+TGG | + | 15006:8413-8432 | MS.gene72939:CDS | 55.0% | |
| GACACCGGAACAACCGTTCA+TGG | - | 15006:7504-7523 | MS.gene72939:intergenic | 55.0% | |
| GATGTGGTTGCGGTTCATCC+GGG | + | 15006:8429-8448 | MS.gene72939:CDS | 55.0% | |
| GCCGTCTCAAACGCCATGAA+CGG | + | 15006:7488-7507 | MS.gene72939:CDS | 55.0% | |
| GGAAAACAAGGCGATCGACG+AGG | + | 15006:8296-8315 | MS.gene72939:CDS | 55.0% | |
| GGAAGCGACATGGAAGACAC+CGG | - | 15006:7519-7538 | MS.gene72939:intergenic | 55.0% | |
| GGATGTGGTTGCGGTTCATC+CGG | + | 15006:8428-8447 | MS.gene72939:CDS | 55.0% | |
| GGTGATGCGAGATTGGGCTT+CGG | - | 15006:7438-7457 | MS.gene72939:intergenic | 55.0% | |
| GTGATGCGAGATTGGGCTTC+GGG | - | 15006:7437-7456 | MS.gene72939:intergenic | 55.0% | |
| TCCGATGAAGCCGTTTGCTC+CGG | - | 15006:7312-7331 | MS.gene72939:intergenic | 55.0% | |
| TGATGCGAGATTGGGCTTCG+GGG | - | 15006:7436-7455 | MS.gene72939:intergenic | 55.0% | |
| TGCTGCTATGGAGTAGTGCG+GGG | + | 15006:9983-10002 | MS.gene72939:intron | 55.0% | |
| ! | GGTTCATCCGGGGACTTGTT+TGG | + | 15006:8440-8459 | MS.gene72939:CDS | 55.0% |
| ! | GTGCTGCTATGGAGTAGTGC+GGG | + | 15006:9982-10001 | MS.gene72939:intron | 55.0% |
| ! | GTTCATGGCGTTTGAGACGG+CGG | - | 15006:7489-7508 | MS.gene72939:intergenic | 55.0% |
| ! | GTTGGGTCTTCGAGAGTGCA+TGG | - | 15006:7542-7561 | MS.gene72939:intergenic | 55.0% |
| ! | TGGGTCTTCGAGAGTGCATG+GGG | - | 15006:7540-7559 | MS.gene72939:intergenic | 55.0% |
| !! | CAAGTTCTGCGGTGTTGCAG+AGG | + | 15006:8490-8509 | MS.gene72939:CDS | 55.0% |
| !! | TCTGTGAGGGTGTTCTCTGC+AGG | - | 15006:10826-10845 | MS.gene72939:intergenic | 55.0% |
| AACGGCCCCAAACAAGTCCC+CGG | - | 15006:8450-8469 | MS.gene72939:intergenic | 60.0% | |
| GAGTGCATGGGGAAGCGACA+TGG | - | 15006:7529-7548 | MS.gene72939:intergenic | 60.0% | |
| TGGCGGTGTGGATGTGGTTG+CGG | + | 15006:8419-8438 | MS.gene72939:CDS | 60.0% | |
| ACGCGTGGGTGTAAAGCGCG+TGG | + | 15006:7628-7647 | MS.gene72939:CDS | 65.0% | |
| TGCGAGATTGGGCTTCGGGG+TGG | - | 15006:7433-7452 | MS.gene72939:intergenic | 65.0% | |
| TTGAGACGGCGGTGGAGTCG+AGG | - | 15006:7478-7497 | MS.gene72939:intergenic | 65.0% | |
| ! | CATGGCGTTTGAGACGGCGG+TGG | - | 15006:7486-7505 | MS.gene72939:intergenic | 65.0% |
| AGGCGATCGACGAGGGGTCG+TGG | + | 15006:8304-8323 | MS.gene72939:CDS | 70.0% | |
| GGAGGCAGAGAAGGCGGCGT+GGG | + | 15006:8380-8399 | MS.gene72939:CDS | 70.0% | |
| CGGAGGCAGAGAAGGCGGCG+TGG | + | 15006:8379-8398 | MS.gene72939:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 15006 | gene | 7272 | 10850 | 7272 | ID=MS.gene72939 |
| 15006 | mRNA | 7272 | 10850 | 7272 | ID=MS.gene72939.t1;Parent=MS.gene72939 |
| 15006 | exon | 7272 | 7676 | 7272 | ID=MS.gene72939.t1.exon1;Parent=MS.gene72939.t1 |
| 15006 | CDS | 7272 | 7676 | 7272 | ID=cds.MS.gene72939.t1;Parent=MS.gene72939.t1 |
| 15006 | exon | 8276 | 8709 | 8276 | ID=MS.gene72939.t1.exon2;Parent=MS.gene72939.t1 |
| 15006 | CDS | 8276 | 8709 | 8276 | ID=cds.MS.gene72939.t1;Parent=MS.gene72939.t1 |
| 15006 | exon | 10688 | 10850 | 10688 | ID=MS.gene72939.t1.exon3;Parent=MS.gene72939.t1 |
| 15006 | CDS | 10688 | 10850 | 10688 | ID=cds.MS.gene72939.t1;Parent=MS.gene72939.t1 |
| Gene Sequence |
| Protein sequence |
