Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73304.t1 | XP_013454886.1 | 81.4 | 204 | 31 | 2 | 1 | 197 | 17 | 220 | 7.80E-78 | 300.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73304.t1 | Q39255 | 55.3 | 188 | 54 | 2 | 10 | 197 | 3 | 160 | 3.8e-49 | 196.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73304.t1 | A0A072UGR2 | 81.4 | 204 | 31 | 2 | 1 | 197 | 17 | 220 | 5.6e-78 | 300.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051003 | MS.gene73304 | 0.806323 | 8.70E-50 | -1.69E-46 |
| MS.gene051343 | MS.gene73304 | 0.8248 | 6.63E-54 | -1.69E-46 |
| MS.gene051676 | MS.gene73304 | 0.809048 | 2.29E-50 | -1.69E-46 |
| MS.gene051902 | MS.gene73304 | 0.819468 | 1.14E-52 | -1.69E-46 |
| MS.gene051975 | MS.gene73304 | 0.812163 | 4.87E-51 | -1.69E-46 |
| MS.gene053298 | MS.gene73304 | 0.809743 | 1.63E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene73304 | 0.839375 | 1.65E-57 | -1.69E-46 |
| MS.gene056699 | MS.gene73304 | 0.805298 | 1.43E-49 | -1.69E-46 |
| MS.gene056986 | MS.gene73304 | 0.808435 | 3.10E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene73304 | 0.805225 | 1.48E-49 | -1.69E-46 |
| MS.gene059146 | MS.gene73304 | 0.807504 | 4.89E-50 | -1.69E-46 |
| MS.gene059965 | MS.gene73304 | 0.805192 | 1.50E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73304.t1 | MTR_4g017860 | 88.725 | 204 | 16 | 2 | 1 | 197 | 17 | 220 | 4.20e-119 | 337 |
| MS.gene73304.t1 | MTR_5g022710 | 60.638 | 188 | 38 | 3 | 10 | 197 | 4 | 155 | 6.41e-66 | 199 |
| MS.gene73304.t1 | MTR_5g022730 | 60.106 | 188 | 39 | 3 | 10 | 197 | 4 | 155 | 1.98e-65 | 198 |
| MS.gene73304.t1 | MTR_4g032400 | 56.383 | 188 | 47 | 2 | 10 | 197 | 11 | 163 | 3.93e-65 | 198 |
| MS.gene73304.t1 | MTR_3g110048 | 53.723 | 188 | 53 | 2 | 10 | 197 | 5 | 158 | 2.91e-64 | 196 |
| MS.gene73304.t1 | MTR_7g021400 | 57.979 | 188 | 43 | 3 | 10 | 197 | 5 | 156 | 3.81e-62 | 190 |
| MS.gene73304.t1 | MTR_4g032450 | 56.085 | 189 | 46 | 4 | 10 | 197 | 23 | 175 | 6.94e-62 | 190 |
| MS.gene73304.t1 | MTR_7g094150 | 58.511 | 188 | 42 | 3 | 10 | 197 | 5 | 156 | 1.35e-61 | 189 |
| MS.gene73304.t1 | MTR_7g094120 | 53.723 | 188 | 53 | 3 | 10 | 197 | 6 | 159 | 1.88e-60 | 186 |
| MS.gene73304.t1 | MTR_7g094170 | 58.511 | 188 | 42 | 3 | 10 | 197 | 5 | 156 | 2.50e-60 | 186 |
| MS.gene73304.t1 | MTR_4g032510 | 53.968 | 189 | 45 | 3 | 10 | 197 | 6 | 153 | 1.66e-58 | 181 |
| MS.gene73304.t1 | MTR_5g085030 | 51.872 | 187 | 55 | 2 | 10 | 196 | 4 | 155 | 3.16e-58 | 180 |
| MS.gene73304.t1 | MTR_8g468480 | 50.000 | 188 | 59 | 2 | 10 | 197 | 4 | 156 | 4.67e-57 | 177 |
| MS.gene73304.t1 | MTR_8g056060 | 53.723 | 188 | 52 | 3 | 10 | 197 | 5 | 157 | 1.21e-56 | 176 |
| MS.gene73304.t1 | MTR_4g032460 | 52.660 | 188 | 48 | 1 | 10 | 197 | 4 | 150 | 4.13e-56 | 174 |
| MS.gene73304.t1 | MTR_4g032500 | 51.337 | 187 | 50 | 2 | 11 | 197 | 7 | 152 | 1.96e-55 | 173 |
| MS.gene73304.t1 | MTR_7g021380 | 54.787 | 188 | 49 | 3 | 10 | 197 | 5 | 156 | 4.19e-55 | 172 |
| MS.gene73304.t1 | MTR_7g094280 | 51.064 | 188 | 55 | 4 | 11 | 197 | 7 | 158 | 1.69e-54 | 171 |
| MS.gene73304.t1 | MTR_4g033455 | 48.691 | 191 | 62 | 3 | 7 | 197 | 6 | 160 | 8.10e-53 | 166 |
| MS.gene73304.t1 | MTR_7g094310 | 48.404 | 188 | 50 | 4 | 11 | 197 | 7 | 148 | 2.89e-48 | 154 |
| MS.gene73304.t1 | MTR_4g033460 | 46.328 | 177 | 59 | 3 | 7 | 183 | 6 | 146 | 3.64e-45 | 150 |
| MS.gene73304.t1 | MTR_4g033460 | 46.512 | 129 | 26 | 3 | 46 | 174 | 160 | 245 | 9.22e-23 | 92.0 |
| MS.gene73304.t1 | MTR_5g082340 | 44.681 | 188 | 58 | 3 | 10 | 197 | 4 | 145 | 1.11e-42 | 140 |
| MS.gene73304.t1 | MTR_1g099870 | 51.471 | 136 | 33 | 1 | 62 | 197 | 1 | 103 | 1.12e-41 | 136 |
| MS.gene73304.t1 | MTR_4g021390 | 42.268 | 194 | 73 | 4 | 4 | 197 | 1 | 155 | 9.24e-41 | 135 |
| MS.gene73304.t1 | MTR_7g094410 | 51.974 | 152 | 64 | 5 | 11 | 155 | 7 | 156 | 1.37e-37 | 128 |
| MS.gene73304.t1 | MTR_4g032420 | 43.210 | 162 | 43 | 2 | 36 | 197 | 38 | 150 | 2.45e-36 | 124 |
| MS.gene73304.t1 | MTR_7g094360 | 45.109 | 184 | 83 | 6 | 11 | 177 | 7 | 189 | 7.37e-34 | 119 |
| MS.gene73304.t1 | MTR_8g089730 | 45.912 | 159 | 33 | 2 | 39 | 197 | 1 | 106 | 1.86e-33 | 115 |
| MS.gene73304.t1 | MTR_7g094350 | 44.624 | 186 | 83 | 7 | 10 | 177 | 5 | 188 | 2.12e-30 | 110 |
| MS.gene73304.t1 | MTR_4g127240 | 44.056 | 143 | 39 | 4 | 41 | 181 | 21 | 124 | 3.14e-28 | 102 |
| MS.gene73304.t1 | MTR_4g131980 | 41.566 | 166 | 54 | 4 | 10 | 174 | 4 | 127 | 3.32e-27 | 100 |
| MS.gene73304.t1 | MTR_7g006370 | 37.778 | 180 | 67 | 4 | 4 | 183 | 1 | 135 | 4.40e-26 | 97.8 |
| MS.gene73304.t1 | MTR_4g119422 | 37.989 | 179 | 70 | 3 | 10 | 187 | 230 | 368 | 5.97e-26 | 102 |
| MS.gene73304.t1 | MTR_8g056090 | 34.759 | 187 | 55 | 6 | 10 | 195 | 5 | 125 | 4.04e-21 | 84.7 |
| MS.gene73304.t1 | MTR_7g071200 | 59.420 | 69 | 27 | 1 | 130 | 197 | 4 | 72 | 1.56e-20 | 81.6 |
| MS.gene73304.t1 | MTR_2g066010 | 31.183 | 186 | 82 | 5 | 13 | 196 | 20 | 161 | 4.13e-19 | 81.3 |
| MS.gene73304.t1 | MTR_4g032470 | 72.222 | 54 | 14 | 1 | 17 | 70 | 32 | 84 | 7.32e-19 | 79.0 |
| MS.gene73304.t1 | MTR_4g032470 | 48.000 | 75 | 38 | 1 | 124 | 197 | 60 | 134 | 2.57e-16 | 72.4 |
| MS.gene73304.t1 | MTR_1g112590 | 30.978 | 184 | 77 | 5 | 19 | 187 | 7 | 155 | 3.74e-18 | 77.8 |
| MS.gene73304.t1 | MTR_2g065720 | 30.645 | 186 | 83 | 5 | 13 | 196 | 37 | 178 | 5.67e-18 | 78.6 |
| MS.gene73304.t1 | MTR_7g094320 | 68.519 | 54 | 16 | 1 | 11 | 64 | 7 | 59 | 9.05e-18 | 75.9 |
| MS.gene73304.t1 | MTR_7g094320 | 47.945 | 73 | 35 | 1 | 128 | 197 | 45 | 117 | 1.63e-14 | 67.4 |
| MS.gene73304.t1 | MTR_4g032540 | 55.556 | 63 | 27 | 1 | 131 | 192 | 70 | 132 | 1.82e-16 | 72.8 |
| MS.gene73304.t1 | MTR_5g096950 | 27.273 | 187 | 89 | 3 | 10 | 196 | 3 | 142 | 3.71e-13 | 64.3 |
| MS.gene73304.t1 | MTR_8g007185 | 29.851 | 134 | 54 | 2 | 55 | 188 | 58 | 151 | 1.32e-11 | 62.4 |
| MS.gene73304.t1 | MTR_8g007205 | 29.851 | 134 | 54 | 2 | 55 | 188 | 58 | 151 | 1.32e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73304.t1 | AT1G20140 | 55.080 | 187 | 55 | 3 | 11 | 197 | 6 | 163 | 1.56e-61 | 189 |
| MS.gene73304.t1 | AT1G75950 | 55.319 | 188 | 54 | 2 | 10 | 197 | 3 | 160 | 1.70e-61 | 189 |
| MS.gene73304.t1 | AT2G25700 | 52.941 | 187 | 59 | 2 | 11 | 197 | 6 | 163 | 2.04e-61 | 188 |
| MS.gene73304.t1 | AT5G42190 | 57.754 | 187 | 59 | 3 | 11 | 197 | 5 | 171 | 5.74e-61 | 187 |
| MS.gene73304.t1 | AT4G34210 | 50.532 | 188 | 55 | 4 | 10 | 197 | 3 | 152 | 4.13e-57 | 177 |
| MS.gene73304.t1 | AT4G34470 | 50.000 | 188 | 56 | 4 | 10 | 197 | 3 | 152 | 5.67e-56 | 174 |
| MS.gene73304.t1 | AT3G60010 | 49.474 | 190 | 57 | 3 | 10 | 197 | 2 | 154 | 4.24e-51 | 162 |
| MS.gene73304.t1 | AT3G21850 | 45.503 | 189 | 64 | 3 | 10 | 197 | 3 | 153 | 1.16e-48 | 155 |
| MS.gene73304.t1 | AT2G03160 | 45.833 | 192 | 96 | 4 | 10 | 197 | 3 | 190 | 5.52e-46 | 150 |
| MS.gene73304.t1 | AT3G21860 | 43.386 | 189 | 67 | 3 | 10 | 197 | 3 | 152 | 3.37e-45 | 147 |
| MS.gene73304.t1 | AT2G03170 | 44.444 | 189 | 62 | 4 | 10 | 197 | 3 | 149 | 5.48e-45 | 146 |
| MS.gene73304.t1 | AT2G03190 | 43.386 | 189 | 82 | 4 | 10 | 197 | 3 | 167 | 4.49e-44 | 145 |
| MS.gene73304.t1 | AT3G21830 | 44.444 | 189 | 65 | 4 | 10 | 197 | 3 | 152 | 9.76e-43 | 140 |
| MS.gene73304.t1 | AT3G60020 | 42.564 | 195 | 64 | 5 | 9 | 197 | 1 | 153 | 2.04e-41 | 137 |
| MS.gene73304.t1 | AT3G25650 | 46.073 | 191 | 74 | 6 | 10 | 197 | 3 | 167 | 2.61e-41 | 138 |
| MS.gene73304.t1 | AT2G20160 | 41.489 | 188 | 68 | 3 | 10 | 196 | 3 | 149 | 2.27e-39 | 132 |
| MS.gene73304.t1 | AT1G10230 | 41.053 | 190 | 77 | 3 | 8 | 196 | 1 | 156 | 6.23e-37 | 126 |
| MS.gene73304.t1 | AT3G21840 | 41.935 | 155 | 50 | 3 | 10 | 163 | 3 | 118 | 1.72e-26 | 98.6 |
Find 42 sgRNAs with CRISPR-Local
Find 41 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGCAAAAGATGATCAAAT+TGG | 0.231570 | 4.1:-79741766 | None:intergenic |
| TGGTCTTGTGTATCGTAAAA+AGG | 0.283090 | 4.1:-79741499 | MS.gene73304:CDS |
| CGTTCGTGCTGCGAATTACT+TGG | 0.309796 | 4.1:-79741343 | MS.gene73304:CDS |
| TCGCTGGTTACGTTTGAGAT+AGG | 0.345572 | 4.1:+79741606 | None:intergenic |
| CTTGGATATTAAGAGCTTGC+TGG | 0.358500 | 4.1:-79741325 | MS.gene73304:CDS |
| CGCTGGTTACGTTTGAGATA+GGG | 0.415779 | 4.1:+79741607 | None:intergenic |
| ACTTCTTTCTCTGCAGCCTT+AGG | 0.416639 | 4.1:+79741438 | None:intergenic |
| GGAGGATGAGCTTGAAAAGT+GGG | 0.450380 | 4.1:-79741409 | MS.gene73304:CDS |
| GTGGGATGCTGAATTTGTTA+AGG | 0.456238 | 4.1:-79741391 | MS.gene73304:CDS |
| TGCAGAGAAAGAAGTGAGTA+AGG | 0.462604 | 4.1:-79741430 | MS.gene73304:CDS |
| CTTACTTGTAACACTGTAGC+TGG | 0.467258 | 4.1:-79741300 | MS.gene73304:CDS |
| CGAATCTCCTCCTCTTCCTC+TGG | 0.468986 | 4.1:+79741213 | None:intergenic |
| AAGCAAAAGATGATCAAATT+GGG | 0.474538 | 4.1:-79741765 | None:intergenic |
| TGATTTCTCTCCAGAGGAAG+AGG | 0.500085 | 4.1:-79741223 | MS.gene73304:CDS |
| AGGAGGATGAGCTTGAAAAG+TGG | 0.500528 | 4.1:-79741410 | MS.gene73304:CDS |
| GACATCGGAGCAGATTCGTC+AGG | 0.503138 | 4.1:-79741262 | MS.gene73304:CDS |
| TTGCTGAAGAAGAAAAGCCT+TGG | 0.514532 | 4.1:-79741530 | MS.gene73304:CDS |
| TGTTTGTGATTCTAATGCTA+CGG | 0.515837 | 4.1:+79741674 | None:intergenic |
| GATTCGTAAGGAAAATCAAT+GGG | 0.519861 | 4.1:-79741196 | MS.gene73304:CDS |
| TACGGCTTCGTCGATTTCGA+AGG | 0.534173 | 4.1:+79741692 | None:intergenic |
| GACAATTGCGTGGACGACAC+TGG | 0.537246 | 4.1:-79741633 | MS.gene73304:CDS |
| AGATTCGTAAGGAAAATCAA+TGG | 0.541072 | 4.1:-79741197 | MS.gene73304:CDS |
| TGTCGCCGTCGGAACTCACA+AGG | 0.550371 | 4.1:+79741715 | None:intergenic |
| AACCAGCGAGATTCTAGCTA+TGG | 0.559406 | 4.1:-79741592 | MS.gene73304:CDS |
| TACCATAGCTAGAATCTCGC+TGG | 0.560708 | 4.1:+79741590 | None:intergenic |
| AGTACCGATGAAAAGAAATC+CGG | 0.562161 | 4.1:-79741471 | MS.gene73304:CDS |
| ATCACCCTTGTGAGTTCCGA+CGG | 0.572745 | 4.1:-79741720 | MS.gene73304:CDS |
| ATCCGGTGAAGATGTTCCTA+AGG | 0.572791 | 4.1:-79741454 | MS.gene73304:CDS |
| GGAAGAGGAGGAGATTCGTA+AGG | 0.588394 | 4.1:-79741208 | MS.gene73304:CDS |
| TTACTTGTAACACTGTAGCT+GGG | 0.593910 | 4.1:-79741299 | MS.gene73304:CDS |
| AGCCTTAGGAACATCTTCAC+CGG | 0.599023 | 4.1:+79741452 | None:intergenic |
| GAAAAGCCTTGGAAGTCAGA+TGG | 0.599846 | 4.1:-79741519 | MS.gene73304:CDS |
| TGCGAATGATTTCTCTCCAG+AGG | 0.601037 | 4.1:-79741229 | MS.gene73304:CDS |
| TTTCTCTCCAGAGGAAGAGG+AGG | 0.615178 | 4.1:-79741220 | MS.gene73304:CDS |
| ACAAGACCATCTGACTTCCA+AGG | 0.631792 | 4.1:+79741513 | None:intergenic |
| GATTTCGAAGGTGTCGCCGT+CGG | 0.632222 | 4.1:+79741704 | None:intergenic |
| AGAGAAAGAAGTGAGTAAGG+AGG | 0.638426 | 4.1:-79741427 | MS.gene73304:CDS |
| CATGATCGAGGACAATTGCG+TGG | 0.657097 | 4.1:-79741643 | MS.gene73304:CDS |
| AACAATCAAGTACATGATCG+AGG | 0.662172 | 4.1:-79741655 | MS.gene73304:CDS |
| GTCGCCGTCGGAACTCACAA+GGG | 0.683304 | 4.1:+79741716 | None:intergenic |
| GATTATACGTGGTAAGACAT+CGG | 0.685652 | 4.1:-79741277 | MS.gene73304:CDS |
| ACTGTAGCTGGGATTATACG+TGG | 0.729556 | 4.1:-79741288 | MS.gene73304:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AGATTCGTAAGGAAAATCAA+TGG | - | chr4.1:79741744-79741763 | MS.gene73304:CDS | 30.0% | |
| GATTCGTAAGGAAAATCAAT+GGG | - | chr4.1:79741745-79741764 | MS.gene73304:CDS | 30.0% | |
| TGTTTGTGATTCTAATGCTA+CGG | + | chr4.1:79741270-79741289 | None:intergenic | 30.0% | |
| AACAATCAAGTACATGATCG+AGG | - | chr4.1:79741286-79741305 | MS.gene73304:CDS | 35.0% | |
| GATTATACGTGGTAAGACAT+CGG | - | chr4.1:79741664-79741683 | MS.gene73304:CDS | 35.0% | |
| TTACTTGTAACACTGTAGCT+GGG | - | chr4.1:79741642-79741661 | MS.gene73304:CDS | 35.0% | |
| ! | TTCACCGGATTTCTTTTCAT+CGG | + | chr4.1:79741477-79741496 | None:intergenic | 35.0% |
| !! | AGTACCGATGAAAAGAAATC+CGG | - | chr4.1:79741470-79741489 | MS.gene73304:CDS | 35.0% |
| !! | TGGTCTTGTGTATCGTAAAA+AGG | - | chr4.1:79741442-79741461 | MS.gene73304:CDS | 35.0% |
| AGAGAAAGAAGTGAGTAAGG+AGG | - | chr4.1:79741514-79741533 | MS.gene73304:CDS | 40.0% | |
| CTTACTTGTAACACTGTAGC+TGG | - | chr4.1:79741641-79741660 | MS.gene73304:CDS | 40.0% | |
| CTTGGATATTAAGAGCTTGC+TGG | - | chr4.1:79741616-79741635 | MS.gene73304:CDS | 40.0% | |
| TGCAGAGAAAGAAGTGAGTA+AGG | - | chr4.1:79741511-79741530 | MS.gene73304:CDS | 40.0% | |
| TTGCTGAAGAAGAAAAGCCT+TGG | - | chr4.1:79741411-79741430 | MS.gene73304:CDS | 40.0% | |
| !! | GTGGGATGCTGAATTTGTTA+AGG | - | chr4.1:79741550-79741569 | MS.gene73304:CDS | 40.0% |
| ACAAGACCATCTGACTTCCA+AGG | + | chr4.1:79741431-79741450 | None:intergenic | 45.0% | |
| ACTGTAGCTGGGATTATACG+TGG | - | chr4.1:79741653-79741672 | MS.gene73304:CDS | 45.0% | |
| ACTTCTTTCTCTGCAGCCTT+AGG | + | chr4.1:79741506-79741525 | None:intergenic | 45.0% | |
| AGCCTTAGGAACATCTTCAC+CGG | + | chr4.1:79741492-79741511 | None:intergenic | 45.0% | |
| AGGAGGATGAGCTTGAAAAG+TGG | - | chr4.1:79741531-79741550 | MS.gene73304:CDS | 45.0% | |
| ATCCGGTGAAGATGTTCCTA+AGG | - | chr4.1:79741487-79741506 | MS.gene73304:CDS | 45.0% | |
| GAAAAGCCTTGGAAGTCAGA+TGG | - | chr4.1:79741422-79741441 | MS.gene73304:CDS | 45.0% | |
| GGAGGATGAGCTTGAAAAGT+GGG | - | chr4.1:79741532-79741551 | MS.gene73304:CDS | 45.0% | |
| TACCATAGCTAGAATCTCGC+TGG | + | chr4.1:79741354-79741373 | None:intergenic | 45.0% | |
| TGATTTCTCTCCAGAGGAAG+AGG | - | chr4.1:79741718-79741737 | MS.gene73304:CDS | 45.0% | |
| TGCGAATGATTTCTCTCCAG+AGG | - | chr4.1:79741712-79741731 | MS.gene73304:CDS | 45.0% | |
| ! | AACCAGCGAGATTCTAGCTA+TGG | - | chr4.1:79741349-79741368 | MS.gene73304:CDS | 45.0% |
| ! | CGCTGGTTACGTTTGAGATA+GGG | + | chr4.1:79741337-79741356 | None:intergenic | 45.0% |
| ! | TCGCTGGTTACGTTTGAGAT+AGG | + | chr4.1:79741338-79741357 | None:intergenic | 45.0% |
| ATCACCCTTGTGAGTTCCGA+CGG | - | chr4.1:79741221-79741240 | MS.gene73304:CDS | 50.0% | |
| CATGATCGAGGACAATTGCG+TGG | - | chr4.1:79741298-79741317 | MS.gene73304:CDS | 50.0% | |
| CGTTCGTGCTGCGAATTACT+TGG | - | chr4.1:79741598-79741617 | MS.gene73304:CDS | 50.0% | |
| GGAAGAGGAGGAGATTCGTA+AGG | - | chr4.1:79741733-79741752 | MS.gene73304:CDS | 50.0% | |
| TTTCTCTCCAGAGGAAGAGG+AGG | - | chr4.1:79741721-79741740 | MS.gene73304:CDS | 50.0% | |
| !! | TACGGCTTCGTCGATTTCGA+AGG | + | chr4.1:79741252-79741271 | None:intergenic | 50.0% |
| CGAATCTCCTCCTCTTCCTC+TGG | + | chr4.1:79741731-79741750 | None:intergenic | 55.0% | |
| GACAATTGCGTGGACGACAC+TGG | - | chr4.1:79741308-79741327 | MS.gene73304:CDS | 55.0% | |
| GACATCGGAGCAGATTCGTC+AGG | - | chr4.1:79741679-79741698 | MS.gene73304:CDS | 55.0% | |
| !! | GATTTCGAAGGTGTCGCCGT+CGG | + | chr4.1:79741240-79741259 | None:intergenic | 55.0% |
| GTCGCCGTCGGAACTCACAA+GGG | + | chr4.1:79741228-79741247 | None:intergenic | 60.0% | |
| TGTCGCCGTCGGAACTCACA+AGG | + | chr4.1:79741229-79741248 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 79741185 | 79741778 | 79741185 | ID=MS.gene73304 |
| chr4.1 | mRNA | 79741185 | 79741778 | 79741185 | ID=MS.gene73304.t1;Parent=MS.gene73304 |
| chr4.1 | exon | 79741185 | 79741778 | 79741185 | ID=MS.gene73304.t1.exon1;Parent=MS.gene73304.t1 |
| chr4.1 | CDS | 79741185 | 79741778 | 79741185 | ID=cds.MS.gene73304.t1;Parent=MS.gene73304.t1 |
| Gene Sequence |
| Protein sequence |
