Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73388.t1 | XP_003624504.2 | 93.8 | 260 | 11 | 2 | 2 | 256 | 106 | 365 | 1.60E-127 | 465.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73388.t1 | G7KX98 | 93.8 | 260 | 11 | 2 | 2 | 256 | 106 | 365 | 1.1e-127 | 465.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene73388 | 0.802818 | 4.68E-49 | -1.69E-46 |
| MS.gene049368 | MS.gene73388 | 0.806214 | 9.17E-50 | -1.69E-46 |
| MS.gene049680 | MS.gene73388 | 0.806447 | 8.19E-50 | -1.69E-46 |
| MS.gene051003 | MS.gene73388 | 0.829394 | 5.28E-55 | -1.69E-46 |
| MS.gene051234 | MS.gene73388 | 0.805589 | 1.24E-49 | -1.69E-46 |
| MS.gene051365 | MS.gene73388 | 0.805864 | 1.09E-49 | -1.69E-46 |
| MS.gene051848 | MS.gene73388 | -0.805054 | 1.61E-49 | -1.69E-46 |
| MS.gene05188 | MS.gene73388 | 0.809519 | 1.82E-50 | -1.69E-46 |
| MS.gene051975 | MS.gene73388 | 0.845137 | 4.90E-59 | -1.69E-46 |
| MS.gene052518 | MS.gene73388 | 0.813239 | 2.83E-51 | -1.69E-46 |
| MS.gene053298 | MS.gene73388 | 0.802115 | 6.54E-49 | -1.69E-46 |
| MS.gene053879 | MS.gene73388 | 0.81133 | 7.39E-51 | -1.69E-46 |
| MS.gene053931 | MS.gene73388 | 0.802968 | 4.36E-49 | -1.69E-46 |
| MS.gene05469 | MS.gene73388 | 0.826408 | 2.76E-54 | -1.69E-46 |
| MS.gene055150 | MS.gene73388 | 0.803325 | 3.68E-49 | -1.69E-46 |
| MS.gene056786 | MS.gene73388 | 0.80617 | 9.37E-50 | -1.69E-46 |
| MS.gene056986 | MS.gene73388 | 0.832803 | 7.67E-56 | -1.69E-46 |
| MS.gene057102 | MS.gene73388 | 0.813964 | 1.96E-51 | -1.69E-46 |
| MS.gene057208 | MS.gene73388 | 0.805055 | 1.61E-49 | -1.69E-46 |
| MS.gene05781 | MS.gene73388 | 0.81743 | 3.31E-52 | -1.69E-46 |
| MS.gene058159 | MS.gene73388 | 0.805369 | 1.38E-49 | -1.69E-46 |
| MS.gene059146 | MS.gene73388 | 0.84472 | 6.35E-59 | -1.69E-46 |
| MS.gene05985 | MS.gene73388 | -0.824054 | 9.94E-54 | -1.69E-46 |
| MS.gene059901 | MS.gene73388 | -0.813024 | 3.16E-51 | -1.69E-46 |
| MS.gene06011 | MS.gene73388 | 0.821804 | 3.32E-53 | -1.69E-46 |
| MS.gene060763 | MS.gene73388 | 0.839856 | 1.23E-57 | -1.69E-46 |
| MS.gene060935 | MS.gene73388 | 0.823857 | 1.10E-53 | -1.69E-46 |
| MS.gene060937 | MS.gene73388 | 0.82866 | 7.95E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73388.t1 | MTR_7g084070 | 94.949 | 297 | 10 | 2 | 1 | 292 | 105 | 401 | 0.0 | 565 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73388.t1 | AT5G13970 | 35.276 | 326 | 147 | 15 | 1 | 289 | 105 | 403 | 1.00e-38 | 140 |
| MS.gene73388.t1 | AT5G13310 | 32.530 | 249 | 137 | 8 | 44 | 286 | 143 | 366 | 1.37e-19 | 88.2 |
| MS.gene73388.t1 | AT5G13310 | 32.530 | 249 | 137 | 8 | 44 | 286 | 143 | 366 | 1.37e-19 | 88.2 |
Find 76 sgRNAs with CRISPR-Local
Find 82 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAAACCGAACACGTTTAT+TGG | 0.185704 | 7.2:+23421368 | None:intergenic |
| AGTTTCCTTGCACAGATAAA+AGG | 0.269056 | 7.2:-23421120 | MS.gene73388:CDS |
| CATGGATGACAAAGCAAATA+AGG | 0.282071 | 7.2:-23421154 | MS.gene73388:CDS |
| AGATTTCTTCTTCGGTATAA+AGG | 0.324848 | 7.2:+23421047 | None:intergenic |
| TCATCGGCAGCTATGCTAAC+AGG | 0.343183 | 7.2:+23420958 | None:intergenic |
| TCAAACCGAACACGTTTATT+GGG | 0.352578 | 7.2:+23421369 | None:intergenic |
| GAAGGATTGCGAATATAATC+AGG | 0.355445 | 7.2:+23421213 | None:intergenic |
| GAAATCTGGTGATGTCACTA+TGG | 0.375778 | 7.2:-23421031 | MS.gene73388:CDS |
| AGGCTCTTGGCAAAGAGGGC+AGG | 0.383943 | 7.2:-23421644 | MS.gene73388:CDS |
| GCAAATTCCTGTGACTTTGA+TGG | 0.394108 | 7.2:+23421246 | None:intergenic |
| GGGATAAGTTCACGTGTGTT+TGG | 0.397330 | 7.2:-23421579 | MS.gene73388:CDS |
| ATGCAAAGTATCAATTTGAT+TGG | 0.400728 | 7.2:+23421485 | None:intergenic |
| CTCTTGGCAAAGAGGGCAGG+GGG | 0.408776 | 7.2:-23421641 | MS.gene73388:CDS |
| TGCAATGGAGGAGGATGAAC+AGG | 0.420285 | 7.2:-23420911 | MS.gene73388:CDS |
| GAGATAAATGAAGATGGAAT+CGG | 0.420742 | 7.2:-23421600 | MS.gene73388:CDS |
| ACATCACCAGATTTCTTCTT+CGG | 0.424129 | 7.2:+23421039 | None:intergenic |
| GGCTCTTGGCAAAGAGGGCA+GGG | 0.430694 | 7.2:-23421643 | MS.gene73388:CDS |
| GGAGAGAATAAGCTTGAAGT+TGG | 0.439007 | 7.2:-23421009 | MS.gene73388:CDS |
| CGGTTTGATTCTGATAAAGA+TGG | 0.442882 | 7.2:-23421354 | MS.gene73388:CDS |
| TTTATACCGAAGAAGAAATC+TGG | 0.445367 | 7.2:-23421045 | MS.gene73388:CDS |
| TTACTCTTCAAAATTGACTT+GGG | 0.458046 | 7.2:+23421414 | None:intergenic |
| GGAGGATCATTATGACAAAC+AGG | 0.458179 | 7.2:-23421664 | MS.gene73388:CDS |
| GAAGAAAACCGACGAGGACT+TGG | 0.459863 | 7.2:-23420836 | MS.gene73388:CDS |
| GCTCTTGGCAAAGAGGGCAG+GGG | 0.470014 | 7.2:-23421642 | MS.gene73388:CDS |
| AGATAAATGAAGATGGAATC+GGG | 0.470704 | 7.2:-23421599 | MS.gene73388:CDS |
| ATCACAGGCAGATGAAGCTT+TGG | 0.495942 | 7.2:-23421088 | MS.gene73388:CDS |
| CATTATGACAAACAGGCTCT+TGG | 0.497963 | 7.2:-23421657 | MS.gene73388:CDS |
| TTTACTCTTCAAAATTGACT+TGG | 0.500079 | 7.2:+23421413 | None:intergenic |
| GCATCACCACCACCGACGTC+TGG | 0.501233 | 7.2:+23421444 | None:intergenic |
| GAATAAGCTTGAAGTTGGAA+AGG | 0.511820 | 7.2:-23421004 | MS.gene73388:CDS |
| CTAGGCCCAATAAACGTGTT+CGG | 0.516488 | 7.2:-23421374 | MS.gene73388:CDS |
| AGAAGTTGAACCGCAAGTAC+AGG | 0.519023 | 7.2:-23420858 | MS.gene73388:CDS |
| AGCTGCATCCTCTTCCATTG+AGG | 0.521556 | 7.2:+23421278 | None:intergenic |
| AAGATAATCCTTCAGAGTCT+AGG | 0.526294 | 7.2:-23421392 | MS.gene73388:CDS |
| TGCTAGGATTAAGTTGAAGC+AGG | 0.527169 | 7.2:-23421520 | MS.gene73388:CDS |
| AAAAGGTTCAAATGCATCAC+AGG | 0.530303 | 7.2:-23421103 | MS.gene73388:CDS |
| ATGAGGGAGATAAATGAAGA+TGG | 0.530531 | 7.2:-23421606 | MS.gene73388:CDS |
| AGGATGAGAAGGAAGGAACC+AGG | 0.531038 | 7.2:-23421320 | MS.gene73388:CDS |
| GGTCTTCATTCGAACATCCC+TGG | 0.538346 | 7.2:+23421302 | None:intergenic |
| GAAGACCTCCTCAATGGAAG+AGG | 0.542891 | 7.2:-23421286 | MS.gene73388:CDS |
| TCGAATGAAGACCTCCTCAA+TGG | 0.542894 | 7.2:-23421292 | MS.gene73388:CDS |
| TCTTGGCAAAGAGGGCAGGG+GGG | 0.547481 | 7.2:-23421640 | MS.gene73388:CDS |
| GAAAACCGACGAGGACTTGG+AGG | 0.553003 | 7.2:-23420833 | MS.gene73388:CDS |
| AAATCAGCCATCAAAGTCAC+AGG | 0.553173 | 7.2:-23421253 | MS.gene73388:CDS |
| TTCGGTATAAAGGTAACAGA+TGG | 0.555047 | 7.2:+23421057 | None:intergenic |
| AAATGATGACGAGGATGAGA+AGG | 0.559814 | 7.2:-23421331 | MS.gene73388:CDS |
| AAACAGGCTCTTGGCAAAGA+GGG | 0.560590 | 7.2:-23421648 | MS.gene73388:CDS |
| GAATCACTTTATGCAGGATG+AGG | 0.571464 | 7.2:-23421685 | None:intergenic |
| TCACTTTATGCAGGATGAGG+AGG | 0.583527 | 7.2:-23421682 | None:intergenic |
| AAATCTGGTGATGTCACTAT+GGG | 0.584932 | 7.2:-23421030 | MS.gene73388:CDS |
| CATCGGCAGCTATGCTAACA+GGG | 0.589427 | 7.2:+23420959 | None:intergenic |
| TTATTGGGCCTAGACTCTGA+AGG | 0.592184 | 7.2:+23421384 | None:intergenic |
| CAAACAGGCTCTTGGCAAAG+AGG | 0.593885 | 7.2:-23421649 | MS.gene73388:CDS |
| GGCAGCTATGCTAACAGGGA+AGG | 0.594716 | 7.2:+23420963 | None:intergenic |
| TGCATCCTCTTCCATTGAGG+AGG | 0.595415 | 7.2:+23421281 | None:intergenic |
| TACTCTTCAAAATTGACTTG+GGG | 0.595453 | 7.2:+23421415 | None:intergenic |
| CCTACACCAGACGTCGGTGG+TGG | 0.598318 | 7.2:-23421450 | MS.gene73388:CDS |
| GGGCTAATCATACCGCTGCT+AGG | 0.601553 | 7.2:-23421536 | MS.gene73388:CDS |
| CAGCGGTATGATTAGCCCGT+GGG | 0.608205 | 7.2:+23421541 | None:intergenic |
| TGATGTATGTGCAATGGAGG+AGG | 0.619859 | 7.2:-23420920 | MS.gene73388:CDS |
| AGGCTCCTCCAAGTCCTCGT+CGG | 0.620365 | 7.2:+23420828 | None:intergenic |
| GCAGCGGTATGATTAGCCCG+TGG | 0.621262 | 7.2:+23421540 | None:intergenic |
| CCACCACCGACGTCTGGTGT+AGG | 0.628069 | 7.2:+23421450 | None:intergenic |
| GTATAAAGGTAACAGATGGA+AGG | 0.634228 | 7.2:+23421061 | None:intergenic |
| GATGACGAGGATGAGAAGGA+AGG | 0.638055 | 7.2:-23421327 | MS.gene73388:CDS |
| CAGTGATGTATGTGCAATGG+AGG | 0.643095 | 7.2:-23420923 | MS.gene73388:CDS |
| GGATGAACAGGAAGTTATCG+AGG | 0.649044 | 7.2:-23420899 | MS.gene73388:CDS |
| AAACAGTGATGTATGTGCAA+TGG | 0.651519 | 7.2:-23420926 | MS.gene73388:CDS |
| TTCCAAACATGCTACACAGT+AGG | 0.652049 | 7.2:+23420808 | None:intergenic |
| GGATGAGAAGGAAGGAACCA+GGG | 0.666124 | 7.2:-23421319 | MS.gene73388:CDS |
| GGATGACAAAGCAAATAAGG+AGG | 0.689367 | 7.2:-23421151 | MS.gene73388:CDS |
| CTTCAACTTAATCCTAGCAG+CGG | 0.691169 | 7.2:+23421524 | None:intergenic |
| AAACCTACACCAGACGTCGG+TGG | 0.708641 | 7.2:-23421453 | MS.gene73388:CDS |
| GAGAAACCTACACCAGACGT+CGG | 0.745038 | 7.2:-23421456 | MS.gene73388:CDS |
| TAAAGATGGAAATGATGACG+AGG | 0.752226 | 7.2:-23421340 | MS.gene73388:CDS |
| GTACAGGAAGAAAACCGACG+AGG | 0.795841 | 7.2:-23420842 | MS.gene73388:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TTTACTCTTCAAAATTGACT+TGG | + | chr7.2:23421084-23421103 | None:intergenic | 25.0% |
| !! | ATGCAAAGTATCAATTTGAT+TGG | + | chr7.2:23421012-23421031 | None:intergenic | 25.0% |
| !! | TTACTCTTCAAAATTGACTT+GGG | + | chr7.2:23421083-23421102 | None:intergenic | 25.0% |
| !!! | GTATAATGTGTGTATTTTGA+AGG | + | chr7.2:23421302-23421321 | None:intergenic | 25.0% |
| AGATAAATGAAGATGGAATC+GGG | - | chr7.2:23420895-23420914 | MS.gene73388:CDS | 30.0% | |
| AGATTTCTTCTTCGGTATAA+AGG | + | chr7.2:23421450-23421469 | None:intergenic | 30.0% | |
| GAGATAAATGAAGATGGAAT+CGG | - | chr7.2:23420894-23420913 | MS.gene73388:CDS | 30.0% | |
| TTTATACCGAAGAAGAAATC+TGG | - | chr7.2:23421449-23421468 | MS.gene73388:CDS | 30.0% | |
| !! | TACTCTTCAAAATTGACTTG+GGG | + | chr7.2:23421082-23421101 | None:intergenic | 30.0% |
| !! | TTTTGATTCTTCAACTGACA+TGG | - | chr7.2:23421322-23421341 | MS.gene73388:CDS | 30.0% |
| AAAAGGTTCAAATGCATCAC+AGG | - | chr7.2:23421391-23421410 | MS.gene73388:CDS | 35.0% | |
| AAACAGTGATGTATGTGCAA+TGG | - | chr7.2:23421568-23421587 | MS.gene73388:CDS | 35.0% | |
| AAGATAATCCTTCAGAGTCT+AGG | - | chr7.2:23421102-23421121 | MS.gene73388:CDS | 35.0% | |
| ACATCACCAGATTTCTTCTT+CGG | + | chr7.2:23421458-23421477 | None:intergenic | 35.0% | |
| AGTTTCCTTGCACAGATAAA+AGG | - | chr7.2:23421374-23421393 | MS.gene73388:CDS | 35.0% | |
| ATCAAACCGAACACGTTTAT+TGG | + | chr7.2:23421129-23421148 | None:intergenic | 35.0% | |
| ATGAGGGAGATAAATGAAGA+TGG | - | chr7.2:23420888-23420907 | MS.gene73388:CDS | 35.0% | |
| CATGGATGACAAAGCAAATA+AGG | - | chr7.2:23421340-23421359 | MS.gene73388:CDS | 35.0% | |
| CGGTTTGATTCTGATAAAGA+TGG | - | chr7.2:23421140-23421159 | MS.gene73388:CDS | 35.0% | |
| GAAGGATTGCGAATATAATC+AGG | + | chr7.2:23421284-23421303 | None:intergenic | 35.0% | |
| GAATAAGCTTGAAGTTGGAA+AGG | - | chr7.2:23421490-23421509 | MS.gene73388:CDS | 35.0% | |
| GTATAAAGGTAACAGATGGA+AGG | + | chr7.2:23421436-23421455 | None:intergenic | 35.0% | |
| TCAAACCGAACACGTTTATT+GGG | + | chr7.2:23421128-23421147 | None:intergenic | 35.0% | |
| TTCGGTATAAAGGTAACAGA+TGG | + | chr7.2:23421440-23421459 | None:intergenic | 35.0% | |
| ! | AAATCTGGTGATGTCACTAT+GGG | - | chr7.2:23421464-23421483 | MS.gene73388:CDS | 35.0% |
| ! | ACTGTTTTCAGTGTCATCAT+CGG | + | chr7.2:23421555-23421574 | None:intergenic | 35.0% |
| ! | TAAAGATGGAAATGATGACG+AGG | - | chr7.2:23421154-23421173 | MS.gene73388:CDS | 35.0% |
| ! | TTGAACCTTTTATCTGTGCA+AGG | + | chr7.2:23421382-23421401 | None:intergenic | 35.0% |
| AAATCAGCCATCAAAGTCAC+AGG | - | chr7.2:23421241-23421260 | MS.gene73388:CDS | 40.0% | |
| CATTATGACAAACAGGCTCT+TGG | - | chr7.2:23420837-23420856 | MS.gene73388:CDS | 40.0% | |
| CTTCAACTTAATCCTAGCAG+CGG | + | chr7.2:23420973-23420992 | None:intergenic | 40.0% | |
| GCAAATTCCTGTGACTTTGA+TGG | + | chr7.2:23421251-23421270 | None:intergenic | 40.0% | |
| GGAGAGAATAAGCTTGAAGT+TGG | - | chr7.2:23421485-23421504 | MS.gene73388:CDS | 40.0% | |
| GGAGGATCATTATGACAAAC+AGG | - | chr7.2:23420830-23420849 | MS.gene73388:CDS | 40.0% | |
| GGATGACAAAGCAAATAAGG+AGG | - | chr7.2:23421343-23421362 | MS.gene73388:CDS | 40.0% | |
| ! | AAATGATGACGAGGATGAGA+AGG | - | chr7.2:23421163-23421182 | MS.gene73388:CDS | 40.0% |
| ! | GAAATCTGGTGATGTCACTA+TGG | - | chr7.2:23421463-23421482 | MS.gene73388:CDS | 40.0% |
| !! | TGCTAGGATTAAGTTGAAGC+AGG | - | chr7.2:23420974-23420993 | MS.gene73388:CDS | 40.0% |
| !!! | AGATTTTTCAAGAGACCCAC+GGG | - | chr7.2:23420938-23420957 | MS.gene73388:CDS | 40.0% |
| !!! | GAGATTTTTCAAGAGACCCA+CGG | - | chr7.2:23420937-23420956 | MS.gene73388:CDS | 40.0% |
| AAACAGGCTCTTGGCAAAGA+GGG | - | chr7.2:23420846-23420865 | MS.gene73388:CDS | 45.0% | |
| AGAAGTTGAACCGCAAGTAC+AGG | - | chr7.2:23421636-23421655 | MS.gene73388:CDS | 45.0% | |
| ATCACAGGCAGATGAAGCTT+TGG | - | chr7.2:23421406-23421425 | MS.gene73388:CDS | 45.0% | |
| CAGTGATGTATGTGCAATGG+AGG | - | chr7.2:23421571-23421590 | MS.gene73388:CDS | 45.0% | |
| CTAGGCCCAATAAACGTGTT+CGG | - | chr7.2:23421120-23421139 | MS.gene73388:CDS | 45.0% | |
| GGATGAACAGGAAGTTATCG+AGG | - | chr7.2:23421595-23421614 | MS.gene73388:CDS | 45.0% | |
| GGGATAAGTTCACGTGTGTT+TGG | - | chr7.2:23420915-23420934 | MS.gene73388:CDS | 45.0% | |
| GGGGGATCGTTTGTATATGA+GGG | - | chr7.2:23420872-23420891 | MS.gene73388:CDS | 45.0% | |
| TCGAATGAAGACCTCCTCAA+TGG | - | chr7.2:23421202-23421221 | MS.gene73388:CDS | 45.0% | |
| TGATGTATGTGCAATGGAGG+AGG | - | chr7.2:23421574-23421593 | MS.gene73388:CDS | 45.0% | |
| TTATTGGGCCTAGACTCTGA+AGG | + | chr7.2:23421113-23421132 | None:intergenic | 45.0% | |
| ! | CGGTTTTCTTCCTGTACTTG+CGG | + | chr7.2:23421649-23421668 | None:intergenic | 45.0% |
| AGCTGCATCCTCTTCCATTG+AGG | + | chr7.2:23421219-23421238 | None:intergenic | 50.0% | |
| AGGATGAGAAGGAAGGAACC+AGG | - | chr7.2:23421174-23421193 | MS.gene73388:CDS | 50.0% | |
| CAAACAGGCTCTTGGCAAAG+AGG | - | chr7.2:23420845-23420864 | MS.gene73388:CDS | 50.0% | |
| CATCGGCAGCTATGCTAACA+GGG | + | chr7.2:23421538-23421557 | None:intergenic | 50.0% | |
| GAAGAAAACCGACGAGGACT+TGG | - | chr7.2:23421658-23421677 | MS.gene73388:CDS | 50.0% | |
| GAAGACCTCCTCAATGGAAG+AGG | - | chr7.2:23421208-23421227 | MS.gene73388:CDS | 50.0% | |
| GAGAAACCTACACCAGACGT+CGG | - | chr7.2:23421038-23421057 | MS.gene73388:CDS | 50.0% | |
| GATGACGAGGATGAGAAGGA+AGG | - | chr7.2:23421167-23421186 | MS.gene73388:CDS | 50.0% | |
| GGATGAGAAGGAAGGAACCA+GGG | - | chr7.2:23421175-23421194 | MS.gene73388:CDS | 50.0% | |
| GGGGGGATCGTTTGTATATG+AGG | - | chr7.2:23420871-23420890 | MS.gene73388:CDS | 50.0% | |
| GGTCTTCATTCGAACATCCC+TGG | + | chr7.2:23421195-23421214 | None:intergenic | 50.0% | |
| GTACAGGAAGAAAACCGACG+AGG | - | chr7.2:23421652-23421671 | MS.gene73388:CDS | 50.0% | |
| TCATCGGCAGCTATGCTAAC+AGG | + | chr7.2:23421539-23421558 | None:intergenic | 50.0% | |
| TGCAATGGAGGAGGATGAAC+AGG | - | chr7.2:23421583-23421602 | MS.gene73388:CDS | 50.0% | |
| TGCATCCTCTTCCATTGAGG+AGG | + | chr7.2:23421216-23421235 | None:intergenic | 50.0% | |
| AAACCTACACCAGACGTCGG+TGG | - | chr7.2:23421041-23421060 | MS.gene73388:CDS | 55.0% | |
| GAAAACCGACGAGGACTTGG+AGG | - | chr7.2:23421661-23421680 | MS.gene73388:CDS | 55.0% | |
| GGCAGCTATGCTAACAGGGA+AGG | + | chr7.2:23421534-23421553 | None:intergenic | 55.0% | |
| GGGCTAATCATACCGCTGCT+AGG | - | chr7.2:23420958-23420977 | MS.gene73388:CDS | 55.0% | |
| ! | CAGCGGTATGATTAGCCCGT+GGG | + | chr7.2:23420956-23420975 | None:intergenic | 55.0% |
| AGGCTCCTCCAAGTCCTCGT+CGG | + | chr7.2:23421669-23421688 | None:intergenic | 60.0% | |
| AGGCTCTTGGCAAAGAGGGC+AGG | - | chr7.2:23420850-23420869 | MS.gene73388:CDS | 60.0% | |
| CTCTTGGCAAAGAGGGCAGG+GGG | - | chr7.2:23420853-23420872 | MS.gene73388:CDS | 60.0% | |
| GCTCTTGGCAAAGAGGGCAG+GGG | - | chr7.2:23420852-23420871 | MS.gene73388:CDS | 60.0% | |
| GGCTCTTGGCAAAGAGGGCA+GGG | - | chr7.2:23420851-23420870 | MS.gene73388:CDS | 60.0% | |
| TCTTGGCAAAGAGGGCAGGG+GGG | - | chr7.2:23420854-23420873 | MS.gene73388:CDS | 60.0% | |
| ! | GCAGCGGTATGATTAGCCCG+TGG | + | chr7.2:23420957-23420976 | None:intergenic | 60.0% |
| CCACCACCGACGTCTGGTGT+AGG | + | chr7.2:23421047-23421066 | None:intergenic | 65.0% | |
| CCTACACCAGACGTCGGTGG+TGG | - | chr7.2:23421044-23421063 | MS.gene73388:CDS | 65.0% | |
| GCATCACCACCACCGACGTC+TGG | + | chr7.2:23421053-23421072 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 23420819 | 23421697 | 23420819 | ID=MS.gene73388 |
| chr7.2 | mRNA | 23420819 | 23421697 | 23420819 | ID=MS.gene73388.t1;Parent=MS.gene73388 |
| chr7.2 | exon | 23420819 | 23421697 | 23420819 | ID=MS.gene73388.t1.exon1;Parent=MS.gene73388.t1 |
| chr7.2 | CDS | 23420819 | 23421697 | 23420819 | ID=cds.MS.gene73388.t1;Parent=MS.gene73388.t1 |
| Gene Sequence |
| Protein sequence |
