Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75015.t1 | XP_003590481.1 | 98.1 | 260 | 5 | 0 | 1 | 260 | 1 | 260 | 1.90E-136 | 495.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75015.t1 | Q08935 | 66.7 | 213 | 54 | 6 | 51 | 259 | 52 | 251 | 6.0e-67 | 255.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75015.t1 | G7IBJ3 | 98.1 | 260 | 5 | 0 | 1 | 260 | 1 | 260 | 1.3e-136 | 495.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050099 | MS.gene75015 | 0.817375 | 3.41E-52 | -1.69E-46 |
| MS.gene051171 | MS.gene75015 | 0.872388 | 3.30E-67 | -1.69E-46 |
| MS.gene051240 | MS.gene75015 | 0.84378 | 1.14E-58 | -1.69E-46 |
| MS.gene051242 | MS.gene75015 | 0.880688 | 4.47E-70 | -1.69E-46 |
| MS.gene051244 | MS.gene75015 | 0.87032 | 1.60E-66 | -1.69E-46 |
| MS.gene052600 | MS.gene75015 | 0.814826 | 1.26E-51 | -1.69E-46 |
| MS.gene053971 | MS.gene75015 | 0.821313 | 4.32E-53 | -1.69E-46 |
| MS.gene055908 | MS.gene75015 | 0.803161 | 3.98E-49 | -1.69E-46 |
| MS.gene055971 | MS.gene75015 | 0.836885 | 7.20E-57 | -1.69E-46 |
| MS.gene056664 | MS.gene75015 | 0.84016 | 1.03E-57 | -1.69E-46 |
| MS.gene058276 | MS.gene75015 | 0.850505 | 1.63E-60 | -1.69E-46 |
| MS.gene058743 | MS.gene75015 | 0.828427 | 9.05E-55 | -1.69E-46 |
| MS.gene058746 | MS.gene75015 | 0.852245 | 5.24E-61 | -1.69E-46 |
| MS.gene060407 | MS.gene75015 | 0.807216 | 5.63E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene017522 | MS.gene75015 | PPI |
| MS.gene011357 | MS.gene75015 | PPI |
| MS.gene066507 | MS.gene75015 | PPI |
| MS.gene48301 | MS.gene75015 | PPI |
| MS.gene27229 | MS.gene75015 | PPI |
| MS.gene23804 | MS.gene75015 | PPI |
| MS.gene059960 | MS.gene75015 | PPI |
| MS.gene033319 | MS.gene75015 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75015.t1 | MTR_1g064230 | 98.077 | 260 | 5 | 0 | 1 | 260 | 1 | 260 | 0.0 | 511 |
| MS.gene75015.t1 | MTR_1g064230 | 46.429 | 84 | 45 | 0 | 83 | 166 | 195 | 278 | 7.66e-16 | 76.3 |
| MS.gene75015.t1 | MTR_3g075500 | 40.727 | 275 | 130 | 7 | 3 | 261 | 14 | 271 | 7.14e-52 | 171 |
| MS.gene75015.t1 | MTR_4g104470 | 50.000 | 182 | 67 | 2 | 81 | 259 | 119 | 279 | 2.33e-51 | 171 |
| MS.gene75015.t1 | MTR_4g104470 | 50.602 | 83 | 41 | 0 | 85 | 167 | 217 | 299 | 2.04e-20 | 89.4 |
| MS.gene75015.t1 | MTR_4g104470 | 37.931 | 87 | 54 | 0 | 195 | 281 | 121 | 207 | 1.43e-11 | 64.3 |
| MS.gene75015.t1 | MTR_3g075500 | 40.659 | 273 | 129 | 7 | 3 | 259 | 14 | 269 | 4.90e-51 | 170 |
| MS.gene75015.t1 | MTR_3g075500 | 40.909 | 88 | 52 | 0 | 79 | 166 | 201 | 288 | 5.40e-17 | 79.7 |
| MS.gene75015.t1 | MTR_7g106440 | 38.095 | 273 | 126 | 7 | 12 | 262 | 27 | 278 | 5.59e-45 | 155 |
| MS.gene75015.t1 | MTR_7g106440 | 43.023 | 86 | 47 | 1 | 191 | 276 | 104 | 187 | 6.35e-15 | 73.9 |
| MS.gene75015.t1 | MTR_7g106440 | 37.634 | 93 | 53 | 1 | 84 | 171 | 212 | 304 | 1.49e-13 | 70.1 |
| MS.gene75015.t1 | MTR_1g056520 | 38.424 | 203 | 102 | 2 | 60 | 262 | 94 | 273 | 2.92e-41 | 145 |
| MS.gene75015.t1 | MTR_1g056520 | 41.176 | 85 | 48 | 1 | 192 | 276 | 104 | 186 | 1.58e-12 | 67.0 |
| MS.gene75015.t1 | MTR_1g045510 | 37.838 | 185 | 94 | 2 | 74 | 258 | 103 | 266 | 7.67e-39 | 138 |
| MS.gene75015.t1 | MTR_1g045510 | 39.189 | 74 | 45 | 0 | 85 | 158 | 205 | 278 | 1.89e-11 | 63.5 |
| MS.gene75015.t1 | MTR_1g045510 | 41.791 | 67 | 39 | 0 | 193 | 259 | 110 | 176 | 5.10e-11 | 62.4 |
| MS.gene75015.t1 | MTR_3g027140 | 35.124 | 242 | 123 | 6 | 27 | 262 | 12 | 225 | 2.19e-33 | 122 |
| MS.gene75015.t1 | MTR_4g070080 | 50.000 | 68 | 34 | 0 | 192 | 259 | 2 | 69 | 1.28e-17 | 77.8 |
| MS.gene75015.t1 | MTR_4g070080 | 40.541 | 74 | 44 | 0 | 85 | 158 | 7 | 80 | 7.46e-12 | 62.0 |
| MS.gene75015.t1 | MTR_4g070080 | 50.000 | 68 | 34 | 0 | 192 | 259 | 2 | 69 | 3.03e-17 | 77.8 |
| MS.gene75015.t1 | MTR_4g070080 | 40.541 | 74 | 44 | 0 | 85 | 158 | 7 | 80 | 1.62e-11 | 62.0 |
| MS.gene75015.t1 | MTR_2g022950 | 30.000 | 180 | 108 | 3 | 86 | 264 | 62 | 224 | 3.47e-17 | 80.1 |
| MS.gene75015.t1 | MTR_1g020080 | 29.592 | 196 | 121 | 5 | 70 | 263 | 176 | 356 | 8.30e-17 | 80.5 |
| MS.gene75015.t1 | MTR_1g020080 | 28.962 | 183 | 110 | 3 | 83 | 264 | 96 | 259 | 1.07e-13 | 71.2 |
| MS.gene75015.t1 | MTR_2g022950 | 30.000 | 180 | 108 | 3 | 86 | 264 | 62 | 224 | 1.06e-16 | 78.6 |
| MS.gene75015.t1 | MTR_2g097960 | 32.203 | 177 | 96 | 5 | 86 | 259 | 17 | 172 | 2.31e-16 | 79.0 |
| MS.gene75015.t1 | MTR_2g097960 | 25.541 | 231 | 138 | 6 | 70 | 279 | 94 | 311 | 3.26e-12 | 66.6 |
| MS.gene75015.t1 | MTR_2g026180 | 28.571 | 182 | 116 | 4 | 85 | 262 | 5 | 176 | 3.45e-16 | 78.6 |
| MS.gene75015.t1 | MTR_4g131970 | 28.061 | 196 | 126 | 5 | 70 | 263 | 153 | 335 | 3.89e-16 | 78.2 |
| MS.gene75015.t1 | MTR_4g131970 | 29.609 | 179 | 102 | 4 | 86 | 261 | 76 | 233 | 8.87e-14 | 71.2 |
| MS.gene75015.t1 | MTR_2g022950 | 30.508 | 177 | 105 | 3 | 86 | 261 | 62 | 221 | 5.71e-16 | 77.8 |
| MS.gene75015.t1 | MTR_2g022950 | 30.108 | 186 | 110 | 6 | 82 | 263 | 153 | 322 | 3.67e-14 | 72.4 |
| MS.gene75015.t1 | MTR_4g070140 | 51.429 | 70 | 34 | 0 | 190 | 259 | 2 | 71 | 7.40e-16 | 74.7 |
| MS.gene75015.t1 | MTR_4g070140 | 43.243 | 74 | 42 | 0 | 85 | 158 | 9 | 82 | 3.51e-13 | 67.0 |
| MS.gene75015.t1 | MTR_4g070190 | 47.826 | 69 | 36 | 0 | 191 | 259 | 3 | 71 | 1.09e-15 | 73.6 |
| MS.gene75015.t1 | MTR_4g070190 | 41.892 | 74 | 43 | 0 | 85 | 158 | 9 | 82 | 5.68e-12 | 63.2 |
| MS.gene75015.t1 | MTR_3g101370 | 29.442 | 197 | 121 | 6 | 70 | 263 | 172 | 353 | 1.77e-15 | 76.6 |
| MS.gene75015.t1 | MTR_3g101370 | 29.744 | 195 | 114 | 5 | 83 | 274 | 92 | 266 | 1.46e-14 | 73.6 |
| MS.gene75015.t1 | MTR_3g101370 | 29.744 | 195 | 114 | 5 | 83 | 274 | 92 | 266 | 2.63e-15 | 75.1 |
| MS.gene75015.t1 | MTR_5g097580 | 29.121 | 182 | 113 | 4 | 85 | 262 | 7 | 176 | 5.22e-15 | 75.1 |
| MS.gene75015.t1 | MTR_5g097580 | 29.032 | 186 | 116 | 4 | 81 | 262 | 3 | 176 | 6.32e-15 | 75.1 |
| MS.gene75015.t1 | MTR_3g080130 | 41.250 | 80 | 47 | 0 | 85 | 164 | 37 | 116 | 9.70e-15 | 70.1 |
| MS.gene75015.t1 | MTR_3g080130 | 44.776 | 67 | 37 | 0 | 196 | 262 | 36 | 102 | 2.32e-14 | 68.9 |
| MS.gene75015.t1 | MTR_1g019150 | 28.814 | 177 | 101 | 4 | 86 | 262 | 34 | 185 | 2.10e-14 | 73.6 |
| MS.gene75015.t1 | MTR_4g109540 | 41.667 | 84 | 49 | 0 | 81 | 164 | 39 | 122 | 2.27e-14 | 72.0 |
| MS.gene75015.t1 | MTR_4g109540 | 47.619 | 63 | 33 | 0 | 197 | 259 | 43 | 105 | 1.21e-13 | 69.7 |
| MS.gene75015.t1 | MTR_4g085540 | 28.249 | 177 | 105 | 4 | 86 | 262 | 124 | 278 | 2.76e-14 | 73.2 |
| MS.gene75015.t1 | MTR_4g085540 | 29.944 | 177 | 99 | 3 | 86 | 262 | 36 | 187 | 1.45e-13 | 71.2 |
| MS.gene75015.t1 | MTR_4g085540 | 28.042 | 189 | 122 | 4 | 86 | 272 | 215 | 391 | 2.61e-12 | 67.4 |
| MS.gene75015.t1 | MTR_3g082650 | 25.967 | 181 | 102 | 4 | 85 | 262 | 19 | 170 | 3.04e-14 | 72.4 |
| MS.gene75015.t1 | MTR_1g020080 | 28.962 | 183 | 110 | 3 | 83 | 264 | 96 | 259 | 3.05e-14 | 72.0 |
| MS.gene75015.t1 | MTR_3g084040 | 47.826 | 69 | 35 | 1 | 194 | 262 | 34 | 101 | 4.13e-14 | 67.4 |
| MS.gene75015.t1 | MTR_3g055990 | 28.022 | 182 | 115 | 4 | 85 | 262 | 7 | 176 | 4.20e-14 | 72.4 |
| MS.gene75015.t1 | MTR_3g025880 | 47.826 | 69 | 36 | 0 | 191 | 259 | 39 | 107 | 4.44e-14 | 72.4 |
| MS.gene75015.t1 | MTR_3g025880 | 39.744 | 78 | 47 | 0 | 81 | 158 | 41 | 118 | 1.76e-11 | 64.7 |
| MS.gene75015.t1 | MTR_3g055990 | 28.022 | 182 | 115 | 4 | 85 | 262 | 7 | 176 | 4.81e-14 | 72.4 |
| MS.gene75015.t1 | MTR_7g102730 | 27.568 | 185 | 109 | 5 | 86 | 267 | 100 | 262 | 6.25e-14 | 72.4 |
| MS.gene75015.t1 | MTR_7g102730 | 26.633 | 199 | 128 | 6 | 63 | 259 | 172 | 354 | 6.92e-12 | 66.2 |
| MS.gene75015.t1 | MTR_4g086600 | 27.895 | 190 | 122 | 2 | 86 | 274 | 118 | 293 | 7.03e-14 | 71.6 |
| MS.gene75015.t1 | MTR_4g086600 | 29.032 | 186 | 118 | 5 | 86 | 263 | 216 | 395 | 3.45e-12 | 66.6 |
| MS.gene75015.t1 | MTR_4g124940 | 28.729 | 181 | 98 | 3 | 86 | 264 | 48 | 199 | 7.27e-14 | 71.6 |
| MS.gene75015.t1 | MTR_4g124940 | 30.556 | 180 | 112 | 3 | 85 | 255 | 132 | 307 | 1.94e-12 | 67.4 |
| MS.gene75015.t1 | MTR_7g013730 | 41.892 | 74 | 43 | 0 | 85 | 158 | 41 | 114 | 1.08e-13 | 69.7 |
| MS.gene75015.t1 | MTR_7g013730 | 41.935 | 62 | 36 | 0 | 197 | 258 | 41 | 102 | 1.47e-12 | 66.6 |
| MS.gene75015.t1 | MTR_7g013740 | 43.284 | 67 | 38 | 0 | 192 | 258 | 36 | 102 | 1.15e-13 | 67.4 |
| MS.gene75015.t1 | MTR_7g013740 | 41.250 | 80 | 47 | 0 | 85 | 164 | 41 | 120 | 1.68e-13 | 67.0 |
| MS.gene75015.t1 | MTR_3g103420 | 29.885 | 174 | 117 | 2 | 81 | 254 | 7 | 175 | 1.26e-13 | 70.9 |
| MS.gene75015.t1 | MTR_6g040070 | 27.374 | 179 | 119 | 5 | 86 | 263 | 107 | 275 | 3.14e-13 | 70.1 |
| MS.gene75015.t1 | MTR_6g040070 | 29.379 | 177 | 102 | 4 | 86 | 262 | 17 | 170 | 6.36e-12 | 66.2 |
| MS.gene75015.t1 | MTR_1g097440 | 29.444 | 180 | 102 | 3 | 83 | 262 | 29 | 183 | 4.35e-13 | 69.7 |
| MS.gene75015.t1 | MTR_1g097440 | 28.249 | 177 | 105 | 4 | 86 | 262 | 120 | 274 | 1.07e-12 | 68.6 |
| MS.gene75015.t1 | MTR_4g109540 | 48.387 | 62 | 32 | 0 | 198 | 259 | 52 | 113 | 1.13e-12 | 67.0 |
| MS.gene75015.t1 | MTR_4g109540 | 38.043 | 92 | 49 | 1 | 81 | 164 | 39 | 130 | 5.44e-12 | 65.1 |
| MS.gene75015.t1 | MTR_1g061870 | 28.649 | 185 | 107 | 5 | 86 | 267 | 105 | 267 | 1.26e-12 | 68.2 |
| MS.gene75015.t1 | MTR_7g105260 | 34.951 | 103 | 57 | 1 | 85 | 187 | 33 | 125 | 2.40e-12 | 63.5 |
| MS.gene75015.t1 | MTR_7g105260 | 36.905 | 84 | 53 | 0 | 197 | 280 | 33 | 116 | 4.40e-11 | 60.1 |
| MS.gene75015.t1 | MTR_3g029580 | 32.967 | 91 | 61 | 0 | 85 | 175 | 33 | 123 | 2.47e-12 | 63.5 |
| MS.gene75015.t1 | MTR_3g084040 | 46.970 | 66 | 34 | 1 | 194 | 259 | 34 | 98 | 2.65e-12 | 63.5 |
| MS.gene75015.t1 | MTR_3g084040 | 42.466 | 73 | 41 | 1 | 85 | 157 | 37 | 108 | 5.95e-11 | 60.1 |
| MS.gene75015.t1 | MTR_8g022050 | 28.507 | 221 | 131 | 5 | 47 | 255 | 118 | 323 | 5.31e-12 | 66.2 |
| MS.gene75015.t1 | MTR_8g022050 | 26.425 | 193 | 113 | 3 | 74 | 264 | 50 | 215 | 4.84e-11 | 63.2 |
| MS.gene75015.t1 | MTR_5g030020 | 28.333 | 180 | 107 | 4 | 83 | 259 | 95 | 255 | 6.86e-12 | 65.5 |
| MS.gene75015.t1 | MTR_1g097280 | 31.452 | 124 | 68 | 3 | 81 | 201 | 26 | 135 | 9.40e-12 | 65.5 |
| MS.gene75015.t1 | MTR_4g104450 | 36.975 | 119 | 58 | 3 | 127 | 244 | 2 | 104 | 1.09e-11 | 60.8 |
| MS.gene75015.t1 | MTR_4g063560 | 34.615 | 78 | 51 | 0 | 80 | 157 | 29 | 106 | 1.43e-11 | 60.8 |
| MS.gene75015.t1 | MTR_1g073690 | 28.161 | 174 | 113 | 3 | 85 | 255 | 7 | 171 | 1.54e-11 | 64.7 |
| MS.gene75015.t1 | MTR_6g040190 | 29.282 | 181 | 113 | 7 | 86 | 263 | 202 | 370 | 2.61e-11 | 64.3 |
| MS.gene75015.t1 | MTR_6g040190 | 28.249 | 177 | 101 | 4 | 86 | 262 | 115 | 265 | 8.11e-11 | 62.8 |
| MS.gene75015.t1 | MTR_2g096560 | 39.744 | 78 | 47 | 0 | 85 | 162 | 8 | 85 | 2.72e-11 | 59.3 |
| MS.gene75015.t1 | MTR_3g109090 | 26.816 | 179 | 104 | 3 | 86 | 264 | 46 | 197 | 2.85e-11 | 63.9 |
| MS.gene75015.t1 | MTR_3g109090 | 26.630 | 184 | 121 | 2 | 86 | 259 | 131 | 310 | 5.18e-11 | 63.2 |
| MS.gene75015.t1 | MTR_3g109090 | 26.816 | 179 | 104 | 3 | 86 | 264 | 62 | 213 | 3.02e-11 | 63.9 |
| MS.gene75015.t1 | MTR_3g109090 | 26.630 | 184 | 121 | 2 | 86 | 259 | 147 | 326 | 5.74e-11 | 63.2 |
| MS.gene75015.t1 | MTR_3g095230 | 27.222 | 180 | 119 | 5 | 83 | 261 | 213 | 381 | 3.80e-11 | 63.9 |
| MS.gene75015.t1 | MTR_3g095230 | 27.222 | 180 | 119 | 5 | 83 | 261 | 213 | 381 | 4.24e-11 | 63.5 |
| MS.gene75015.t1 | MTR_1g036430 | 26.263 | 198 | 116 | 7 | 81 | 254 | 159 | 350 | 6.28e-11 | 63.2 |
| MS.gene75015.t1 | MTR_6g004810 | 23.121 | 173 | 103 | 3 | 85 | 254 | 46 | 191 | 8.13e-11 | 62.4 |
| MS.gene75015.t1 | MTR_5g017280 | 27.746 | 173 | 99 | 4 | 83 | 254 | 3 | 150 | 9.51e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75015.t1 | AT2G37220 | 63.134 | 217 | 73 | 3 | 49 | 260 | 54 | 268 | 1.88e-83 | 253 |
| MS.gene75015.t1 | AT2G37220 | 45.238 | 84 | 46 | 0 | 85 | 168 | 205 | 288 | 4.58e-17 | 79.7 |
| MS.gene75015.t1 | AT5G50250 | 41.544 | 272 | 126 | 5 | 2 | 259 | 18 | 270 | 3.43e-52 | 172 |
| MS.gene75015.t1 | AT5G50250 | 45.679 | 81 | 44 | 0 | 80 | 160 | 203 | 283 | 1.13e-15 | 75.9 |
| MS.gene75015.t1 | AT4G24770 | 48.485 | 198 | 84 | 1 | 62 | 259 | 128 | 307 | 3.47e-51 | 171 |
| MS.gene75015.t1 | AT4G24770 | 48.276 | 87 | 45 | 0 | 80 | 166 | 240 | 326 | 1.13e-20 | 90.5 |
| MS.gene75015.t1 | AT4G24770 | 48.485 | 198 | 84 | 1 | 62 | 259 | 128 | 307 | 3.47e-51 | 171 |
| MS.gene75015.t1 | AT4G24770 | 48.276 | 87 | 45 | 0 | 80 | 166 | 240 | 326 | 1.13e-20 | 90.5 |
| MS.gene75015.t1 | AT3G53460 | 58.101 | 179 | 56 | 6 | 16 | 177 | 14 | 190 | 2.07e-44 | 154 |
| MS.gene75015.t1 | AT3G53460 | 69.231 | 65 | 20 | 0 | 196 | 260 | 257 | 321 | 1.31e-24 | 101 |
| MS.gene75015.t1 | AT3G53460 | 48.810 | 84 | 43 | 0 | 85 | 168 | 258 | 341 | 6.41e-19 | 85.9 |
| MS.gene75015.t1 | AT3G53460 | 58.101 | 179 | 56 | 6 | 16 | 177 | 14 | 190 | 2.07e-44 | 154 |
| MS.gene75015.t1 | AT3G53460 | 69.231 | 65 | 20 | 0 | 196 | 260 | 257 | 321 | 1.31e-24 | 101 |
| MS.gene75015.t1 | AT3G53460 | 48.810 | 84 | 43 | 0 | 85 | 168 | 258 | 341 | 6.41e-19 | 85.9 |
| MS.gene75015.t1 | AT3G53460 | 58.101 | 179 | 56 | 6 | 16 | 177 | 14 | 190 | 2.07e-44 | 154 |
| MS.gene75015.t1 | AT3G53460 | 69.231 | 65 | 20 | 0 | 196 | 260 | 257 | 321 | 1.31e-24 | 101 |
| MS.gene75015.t1 | AT3G53460 | 48.810 | 84 | 43 | 0 | 85 | 168 | 258 | 341 | 6.41e-19 | 85.9 |
| MS.gene75015.t1 | AT3G52380 | 43.617 | 188 | 97 | 3 | 85 | 272 | 117 | 295 | 2.25e-42 | 148 |
| MS.gene75015.t1 | AT3G53460 | 52.500 | 200 | 55 | 7 | 16 | 177 | 14 | 211 | 1.23e-40 | 145 |
| MS.gene75015.t1 | AT3G53460 | 69.231 | 65 | 20 | 0 | 196 | 260 | 278 | 342 | 1.86e-24 | 101 |
| MS.gene75015.t1 | AT3G53460 | 48.810 | 84 | 43 | 0 | 85 | 168 | 279 | 362 | 7.40e-19 | 85.9 |
| MS.gene75015.t1 | AT1G60000 | 35.115 | 262 | 141 | 6 | 4 | 259 | 2 | 240 | 2.15e-39 | 139 |
| MS.gene75015.t1 | AT1G60000 | 49.333 | 75 | 38 | 0 | 84 | 158 | 177 | 251 | 3.20e-16 | 77.0 |
| MS.gene75015.t1 | AT3G52150 | 40.000 | 185 | 100 | 2 | 78 | 262 | 70 | 243 | 1.85e-36 | 131 |
| MS.gene75015.t1 | AT3G52150 | 40.000 | 185 | 100 | 2 | 78 | 262 | 70 | 243 | 1.85e-36 | 131 |
| MS.gene75015.t1 | AT2G35410 | 30.385 | 260 | 153 | 6 | 11 | 262 | 22 | 261 | 1.57e-26 | 106 |
| MS.gene75015.t1 | AT1G01080 | 35.165 | 182 | 97 | 3 | 86 | 261 | 110 | 276 | 4.91e-24 | 99.0 |
| MS.gene75015.t1 | AT1G01080 | 35.429 | 175 | 93 | 2 | 86 | 254 | 110 | 270 | 1.18e-23 | 98.2 |
| MS.gene75015.t1 | AT1G01080 | 35.227 | 176 | 93 | 3 | 86 | 254 | 110 | 271 | 7.42e-23 | 95.9 |
| MS.gene75015.t1 | AT1G34140 | 30.612 | 196 | 124 | 5 | 86 | 281 | 121 | 304 | 9.62e-18 | 83.2 |
| MS.gene75015.t1 | AT3G16380 | 30.045 | 223 | 140 | 5 | 40 | 262 | 163 | 369 | 2.96e-17 | 82.0 |
| MS.gene75015.t1 | AT3G16380 | 31.844 | 179 | 99 | 5 | 86 | 264 | 114 | 269 | 4.29e-13 | 69.7 |
| MS.gene75015.t1 | AT4G14300 | 32.749 | 171 | 107 | 3 | 85 | 255 | 7 | 169 | 4.82e-17 | 80.9 |
| MS.gene75015.t1 | AT4G14300 | 32.749 | 171 | 107 | 3 | 85 | 255 | 7 | 169 | 4.82e-17 | 80.9 |
| MS.gene75015.t1 | AT4G34110 | 30.460 | 174 | 99 | 4 | 86 | 259 | 126 | 277 | 7.59e-17 | 80.9 |
| MS.gene75015.t1 | AT4G34110 | 28.889 | 180 | 103 | 3 | 83 | 262 | 35 | 189 | 3.24e-14 | 73.2 |
| MS.gene75015.t1 | AT4G34110 | 27.778 | 198 | 126 | 5 | 75 | 267 | 206 | 391 | 1.25e-11 | 65.5 |
| MS.gene75015.t1 | AT5G40490 | 27.692 | 195 | 106 | 4 | 68 | 254 | 21 | 188 | 1.27e-16 | 79.7 |
| MS.gene75015.t1 | AT5G40490 | 35.000 | 100 | 62 | 1 | 84 | 183 | 130 | 226 | 8.90e-11 | 62.4 |
| MS.gene75015.t1 | AT3G23830 | 53.125 | 64 | 30 | 0 | 196 | 259 | 35 | 98 | 1.30e-16 | 75.1 |
| MS.gene75015.t1 | AT3G23830 | 40.000 | 85 | 49 | 1 | 85 | 167 | 36 | 120 | 2.58e-13 | 66.2 |
| MS.gene75015.t1 | AT3G23830 | 53.125 | 64 | 30 | 0 | 196 | 259 | 35 | 98 | 1.30e-16 | 75.1 |
| MS.gene75015.t1 | AT3G23830 | 40.000 | 85 | 49 | 1 | 85 | 167 | 36 | 120 | 2.58e-13 | 66.2 |
| MS.gene75015.t1 | AT1G54080 | 32.258 | 186 | 99 | 4 | 86 | 255 | 150 | 324 | 3.57e-16 | 78.6 |
| MS.gene75015.t1 | AT1G54080 | 27.320 | 194 | 110 | 4 | 74 | 264 | 51 | 216 | 1.46e-11 | 64.7 |
| MS.gene75015.t1 | AT5G19350 | 32.571 | 175 | 97 | 4 | 86 | 259 | 26 | 180 | 3.69e-16 | 78.6 |
| MS.gene75015.t1 | AT5G19350 | 32.571 | 175 | 97 | 4 | 86 | 259 | 26 | 180 | 4.31e-16 | 78.2 |
| MS.gene75015.t1 | AT5G19350 | 25.128 | 195 | 131 | 4 | 82 | 269 | 114 | 300 | 1.45e-11 | 64.7 |
| MS.gene75015.t1 | AT2G21660 | 49.275 | 69 | 35 | 0 | 191 | 259 | 3 | 71 | 9.28e-16 | 73.6 |
| MS.gene75015.t1 | AT2G21660 | 41.892 | 74 | 43 | 0 | 85 | 158 | 9 | 82 | 2.41e-11 | 61.2 |
| MS.gene75015.t1 | AT5G55550 | 26.923 | 182 | 121 | 4 | 85 | 262 | 7 | 180 | 1.01e-15 | 77.4 |
| MS.gene75015.t1 | AT5G55550 | 26.923 | 182 | 121 | 4 | 85 | 262 | 7 | 180 | 1.01e-15 | 77.4 |
| MS.gene75015.t1 | AT5G55550 | 26.923 | 182 | 121 | 4 | 85 | 262 | 7 | 180 | 1.01e-15 | 77.4 |
| MS.gene75015.t1 | AT5G55550 | 26.923 | 182 | 121 | 4 | 85 | 262 | 7 | 180 | 1.01e-15 | 77.4 |
| MS.gene75015.t1 | AT4G26650 | 26.203 | 187 | 119 | 4 | 85 | 262 | 13 | 189 | 1.25e-15 | 77.0 |
| MS.gene75015.t1 | AT4G26650 | 26.203 | 187 | 119 | 4 | 85 | 262 | 16 | 192 | 1.30e-15 | 77.0 |
| MS.gene75015.t1 | AT2G21660 | 49.275 | 69 | 35 | 0 | 191 | 259 | 3 | 71 | 1.34e-15 | 73.6 |
| MS.gene75015.t1 | AT2G21660 | 41.892 | 74 | 43 | 0 | 85 | 158 | 9 | 82 | 3.29e-11 | 61.2 |
| MS.gene75015.t1 | AT5G55550 | 26.923 | 182 | 121 | 4 | 85 | 262 | 7 | 180 | 1.54e-15 | 76.6 |
| MS.gene75015.t1 | AT5G55550 | 26.923 | 182 | 121 | 4 | 85 | 262 | 7 | 180 | 1.54e-15 | 76.6 |
| MS.gene75015.t1 | AT5G55550 | 26.923 | 182 | 121 | 4 | 85 | 262 | 7 | 180 | 1.54e-15 | 76.6 |
| MS.gene75015.t1 | AT5G55550 | 26.923 | 182 | 121 | 4 | 85 | 262 | 7 | 180 | 1.54e-15 | 76.6 |
| MS.gene75015.t1 | AT5G55550 | 26.923 | 182 | 121 | 4 | 85 | 262 | 7 | 180 | 1.54e-15 | 76.6 |
| MS.gene75015.t1 | AT1G49600 | 30.693 | 202 | 115 | 4 | 74 | 274 | 115 | 292 | 5.48e-15 | 75.1 |
| MS.gene75015.t1 | AT1G49600 | 30.481 | 187 | 116 | 5 | 82 | 263 | 211 | 388 | 3.46e-12 | 66.6 |
| MS.gene75015.t1 | AT1G49600 | 30.693 | 202 | 115 | 4 | 74 | 274 | 115 | 292 | 5.48e-15 | 75.1 |
| MS.gene75015.t1 | AT1G49600 | 30.481 | 187 | 116 | 5 | 82 | 263 | 211 | 388 | 3.46e-12 | 66.6 |
| MS.gene75015.t1 | AT1G17640 | 29.885 | 174 | 87 | 4 | 85 | 251 | 67 | 212 | 5.60e-15 | 74.7 |
| MS.gene75015.t1 | AT1G17640 | 29.885 | 174 | 87 | 4 | 85 | 251 | 67 | 212 | 5.60e-15 | 74.7 |
| MS.gene75015.t1 | AT1G17640 | 29.885 | 174 | 87 | 4 | 85 | 251 | 67 | 212 | 5.60e-15 | 74.7 |
| MS.gene75015.t1 | AT1G71770 | 29.282 | 181 | 108 | 3 | 86 | 266 | 148 | 308 | 8.84e-15 | 74.7 |
| MS.gene75015.t1 | AT1G71770 | 30.645 | 186 | 114 | 6 | 86 | 267 | 241 | 415 | 8.45e-14 | 72.0 |
| MS.gene75015.t1 | AT1G71770 | 28.177 | 181 | 104 | 4 | 82 | 262 | 57 | 211 | 1.45e-11 | 65.1 |
| MS.gene75015.t1 | AT1G71770 | 29.282 | 181 | 108 | 3 | 86 | 266 | 148 | 308 | 8.84e-15 | 74.7 |
| MS.gene75015.t1 | AT1G71770 | 30.645 | 186 | 114 | 6 | 86 | 267 | 241 | 415 | 8.45e-14 | 72.0 |
| MS.gene75015.t1 | AT1G71770 | 28.177 | 181 | 104 | 4 | 82 | 262 | 57 | 211 | 1.45e-11 | 65.1 |
| MS.gene75015.t1 | AT2G33410 | 32.335 | 167 | 105 | 3 | 85 | 251 | 7 | 165 | 1.05e-14 | 74.3 |
| MS.gene75015.t1 | AT1G49600 | 30.693 | 202 | 115 | 4 | 74 | 274 | 115 | 292 | 1.95e-14 | 73.6 |
| MS.gene75015.t1 | AT1G49600 | 30.481 | 187 | 116 | 5 | 82 | 263 | 211 | 388 | 8.32e-12 | 65.5 |
| MS.gene75015.t1 | AT1G54080 | 31.579 | 190 | 99 | 5 | 86 | 255 | 150 | 328 | 1.95e-14 | 73.6 |
| MS.gene75015.t1 | AT1G22760 | 27.753 | 227 | 151 | 6 | 56 | 282 | 204 | 417 | 2.24e-14 | 73.6 |
| MS.gene75015.t1 | AT1G22760 | 31.016 | 187 | 103 | 6 | 86 | 269 | 138 | 301 | 6.93e-14 | 72.0 |
| MS.gene75015.t1 | AT1G22760 | 27.624 | 181 | 105 | 4 | 82 | 262 | 47 | 201 | 3.21e-11 | 64.3 |
| MS.gene75015.t1 | AT5G54900 | 29.474 | 190 | 106 | 6 | 82 | 263 | 152 | 321 | 2.37e-14 | 73.2 |
| MS.gene75015.t1 | AT5G54900 | 29.143 | 175 | 105 | 3 | 86 | 259 | 62 | 218 | 1.18e-13 | 70.9 |
| MS.gene75015.t1 | AT2G23350 | 29.944 | 177 | 99 | 3 | 86 | 262 | 48 | 199 | 4.10e-14 | 72.8 |
| MS.gene75015.t1 | AT2G23350 | 29.885 | 174 | 100 | 4 | 86 | 259 | 136 | 287 | 1.39e-13 | 71.2 |
| MS.gene75015.t1 | AT2G23350 | 31.937 | 191 | 105 | 6 | 86 | 267 | 227 | 401 | 1.72e-12 | 68.2 |
| MS.gene75015.t1 | AT3G19130 | 29.703 | 202 | 117 | 4 | 74 | 274 | 104 | 281 | 4.92e-14 | 72.4 |
| MS.gene75015.t1 | AT3G19130 | 28.947 | 190 | 120 | 5 | 82 | 263 | 200 | 382 | 8.37e-11 | 62.8 |
| MS.gene75015.t1 | AT4G13850 | 47.619 | 63 | 33 | 0 | 197 | 259 | 36 | 98 | 7.62e-14 | 67.4 |
| MS.gene75015.t1 | AT4G13850 | 40.000 | 80 | 48 | 0 | 85 | 164 | 36 | 115 | 1.83e-13 | 66.6 |
| MS.gene75015.t1 | AT3G13224 | 26.882 | 186 | 110 | 5 | 69 | 254 | 8 | 167 | 8.16e-14 | 69.7 |
| MS.gene75015.t1 | AT4G13850 | 47.619 | 63 | 33 | 0 | 197 | 259 | 36 | 98 | 9.43e-14 | 67.8 |
| MS.gene75015.t1 | AT4G13850 | 40.000 | 85 | 49 | 1 | 85 | 167 | 36 | 120 | 1.31e-13 | 67.4 |
| MS.gene75015.t1 | AT5G40490 | 26.829 | 164 | 90 | 3 | 94 | 254 | 35 | 171 | 9.59e-14 | 71.2 |
| MS.gene75015.t1 | AT5G40490 | 35.000 | 100 | 62 | 1 | 84 | 183 | 113 | 209 | 4.39e-11 | 63.5 |
| MS.gene75015.t1 | AT4G13850 | 47.619 | 63 | 33 | 0 | 197 | 259 | 36 | 98 | 1.15e-13 | 67.8 |
| MS.gene75015.t1 | AT4G13850 | 40.000 | 85 | 49 | 1 | 85 | 167 | 36 | 120 | 1.60e-13 | 67.4 |
| MS.gene75015.t1 | AT4G13850 | 47.619 | 63 | 33 | 0 | 197 | 259 | 36 | 98 | 1.28e-13 | 67.8 |
| MS.gene75015.t1 | AT4G13850 | 40.000 | 85 | 49 | 1 | 85 | 167 | 36 | 120 | 1.78e-13 | 67.4 |
| MS.gene75015.t1 | AT4G39260 | 45.588 | 68 | 37 | 0 | 192 | 259 | 2 | 69 | 1.66e-13 | 65.5 |
| MS.gene75015.t1 | AT4G39260 | 39.189 | 74 | 45 | 0 | 85 | 158 | 7 | 80 | 8.51e-11 | 58.2 |
| MS.gene75015.t1 | AT5G47620 | 27.473 | 182 | 116 | 6 | 85 | 262 | 7 | 176 | 1.74e-13 | 70.5 |
| MS.gene75015.t1 | AT5G47620 | 27.473 | 182 | 116 | 6 | 85 | 262 | 7 | 176 | 1.74e-13 | 70.5 |
| MS.gene75015.t1 | AT5G47620 | 27.473 | 182 | 116 | 6 | 85 | 262 | 7 | 176 | 1.74e-13 | 70.5 |
| MS.gene75015.t1 | AT5G61030 | 46.970 | 66 | 35 | 0 | 194 | 259 | 38 | 103 | 1.90e-13 | 69.7 |
| MS.gene75015.t1 | AT5G61030 | 44.595 | 74 | 41 | 0 | 85 | 158 | 41 | 114 | 2.30e-12 | 66.6 |
| MS.gene75015.t1 | AT5G61030 | 46.970 | 66 | 35 | 0 | 194 | 259 | 38 | 103 | 1.90e-13 | 69.7 |
| MS.gene75015.t1 | AT5G61030 | 44.595 | 74 | 41 | 0 | 85 | 158 | 41 | 114 | 2.30e-12 | 66.6 |
| MS.gene75015.t1 | AT4G39260 | 40.506 | 79 | 47 | 0 | 192 | 270 | 2 | 80 | 2.66e-13 | 65.9 |
| MS.gene75015.t1 | AT4G39260 | 39.189 | 74 | 45 | 0 | 85 | 158 | 7 | 80 | 9.02e-11 | 58.9 |
| MS.gene75015.t1 | AT1G11650 | 28.571 | 196 | 116 | 6 | 72 | 263 | 147 | 322 | 3.04e-13 | 69.7 |
| MS.gene75015.t1 | AT1G11650 | 30.857 | 175 | 101 | 4 | 86 | 259 | 64 | 219 | 1.66e-12 | 67.8 |
| MS.gene75015.t1 | AT3G07810 | 28.796 | 191 | 112 | 5 | 81 | 262 | 3 | 178 | 5.00e-13 | 69.3 |
| MS.gene75015.t1 | AT1G47500 | 29.730 | 185 | 115 | 4 | 82 | 264 | 197 | 368 | 5.15e-13 | 69.3 |
| MS.gene75015.t1 | AT1G47500 | 30.000 | 190 | 112 | 4 | 83 | 269 | 102 | 273 | 5.14e-12 | 66.2 |
| MS.gene75015.t1 | AT3G07810 | 28.796 | 191 | 112 | 5 | 81 | 262 | 3 | 178 | 5.64e-13 | 69.3 |
| MS.gene75015.t1 | AT3G13224 | 25.731 | 171 | 105 | 3 | 84 | 254 | 10 | 158 | 5.74e-13 | 68.6 |
| MS.gene75015.t1 | AT4G39260 | 40.506 | 79 | 47 | 0 | 192 | 270 | 2 | 80 | 6.73e-13 | 65.9 |
| MS.gene75015.t1 | AT3G13224 | 26.882 | 186 | 110 | 5 | 69 | 254 | 8 | 167 | 7.79e-13 | 68.6 |
| MS.gene75015.t1 | AT1G11650 | 29.714 | 175 | 103 | 3 | 86 | 259 | 64 | 219 | 7.98e-13 | 68.2 |
| MS.gene75015.t1 | AT1G11650 | 28.652 | 178 | 103 | 6 | 72 | 245 | 147 | 304 | 9.04e-11 | 62.0 |
| MS.gene75015.t1 | AT3G14100 | 28.319 | 226 | 125 | 5 | 47 | 255 | 115 | 320 | 8.21e-13 | 68.6 |
| MS.gene75015.t1 | AT1G47500 | 30.000 | 190 | 112 | 4 | 83 | 269 | 102 | 273 | 9.95e-13 | 67.8 |
| MS.gene75015.t1 | AT1G49760 | 28.161 | 174 | 103 | 4 | 86 | 259 | 135 | 286 | 1.29e-12 | 68.6 |
| MS.gene75015.t1 | AT1G49760 | 29.609 | 179 | 112 | 4 | 86 | 262 | 226 | 392 | 5.65e-12 | 66.6 |
| MS.gene75015.t1 | AT1G49760 | 28.161 | 174 | 103 | 4 | 86 | 259 | 135 | 286 | 1.29e-12 | 68.6 |
| MS.gene75015.t1 | AT1G49760 | 29.609 | 179 | 112 | 4 | 86 | 262 | 226 | 392 | 5.65e-12 | 66.6 |
| MS.gene75015.t1 | AT3G08000 | 38.298 | 94 | 51 | 1 | 85 | 171 | 42 | 135 | 1.97e-12 | 63.9 |
| MS.gene75015.t1 | AT1G60650 | 35.366 | 82 | 53 | 0 | 195 | 276 | 11 | 92 | 2.14e-12 | 66.6 |
| MS.gene75015.t1 | AT1G60650 | 35.366 | 82 | 53 | 0 | 195 | 276 | 11 | 92 | 2.14e-12 | 66.6 |
| MS.gene75015.t1 | AT4G39260 | 44.776 | 67 | 37 | 0 | 192 | 258 | 2 | 68 | 2.14e-12 | 62.8 |
| MS.gene75015.t1 | AT1G17370 | 28.440 | 218 | 132 | 5 | 47 | 255 | 110 | 312 | 2.32e-12 | 67.4 |
| MS.gene75015.t1 | AT1G17370 | 26.425 | 193 | 113 | 3 | 74 | 264 | 42 | 207 | 2.88e-11 | 63.9 |
| MS.gene75015.t1 | AT4G36960 | 28.497 | 193 | 110 | 5 | 83 | 274 | 2 | 167 | 3.62e-12 | 66.6 |
| MS.gene75015.t1 | AT4G36960 | 28.497 | 193 | 110 | 5 | 83 | 274 | 2 | 167 | 3.62e-12 | 66.6 |
| MS.gene75015.t1 | AT1G74230 | 45.455 | 66 | 35 | 1 | 194 | 259 | 32 | 96 | 3.84e-12 | 65.9 |
| MS.gene75015.t1 | AT1G74230 | 44.595 | 74 | 40 | 1 | 85 | 158 | 35 | 107 | 2.42e-11 | 63.5 |
| MS.gene75015.t1 | AT5G09880 | 27.083 | 192 | 122 | 5 | 73 | 261 | 154 | 330 | 5.20e-12 | 66.2 |
| MS.gene75015.t1 | AT5G47620 | 25.871 | 201 | 117 | 6 | 85 | 262 | 7 | 198 | 5.94e-12 | 66.2 |
| MS.gene75015.t1 | AT1G17370 | 28.054 | 221 | 132 | 5 | 47 | 255 | 110 | 315 | 6.64e-12 | 65.9 |
| MS.gene75015.t1 | AT1G17370 | 26.425 | 193 | 113 | 3 | 74 | 264 | 42 | 207 | 3.46e-11 | 63.5 |
| MS.gene75015.t1 | AT1G47490 | 28.947 | 190 | 114 | 4 | 83 | 269 | 100 | 271 | 7.75e-12 | 65.1 |
| MS.gene75015.t1 | AT2G36660 | 27.528 | 178 | 104 | 3 | 86 | 263 | 26 | 178 | 8.59e-12 | 65.9 |
| MS.gene75015.t1 | AT2G36660 | 27.933 | 179 | 105 | 4 | 86 | 264 | 114 | 268 | 5.42e-11 | 63.5 |
| MS.gene75015.t1 | AT5G06210 | 37.838 | 74 | 46 | 0 | 85 | 158 | 35 | 108 | 1.03e-11 | 62.0 |
| MS.gene75015.t1 | AT5G06210 | 42.188 | 64 | 37 | 0 | 196 | 259 | 34 | 97 | 4.07e-11 | 60.5 |
| MS.gene75015.t1 | AT3G26420 | 35.714 | 84 | 54 | 0 | 79 | 162 | 2 | 85 | 1.10e-11 | 63.9 |
| MS.gene75015.t1 | AT1G47490 | 28.804 | 184 | 118 | 5 | 82 | 264 | 195 | 366 | 1.13e-11 | 65.1 |
| MS.gene75015.t1 | AT1G47490 | 28.718 | 195 | 118 | 4 | 83 | 274 | 100 | 276 | 2.48e-11 | 64.3 |
| MS.gene75015.t1 | AT4G27000 | 28.333 | 180 | 109 | 3 | 86 | 264 | 82 | 242 | 1.30e-11 | 65.1 |
| MS.gene75015.t1 | AT4G13860 | 44.595 | 74 | 41 | 0 | 85 | 158 | 4 | 77 | 2.38e-11 | 59.3 |
| MS.gene75015.t1 | AT5G41690 | 25.641 | 195 | 123 | 6 | 84 | 265 | 68 | 253 | 6.13e-11 | 63.2 |
| MS.gene75015.t1 | AT5G41690 | 25.641 | 195 | 123 | 6 | 84 | 265 | 68 | 253 | 6.13e-11 | 63.2 |
| MS.gene75015.t1 | AT5G41690 | 25.641 | 195 | 123 | 6 | 84 | 265 | 68 | 253 | 6.13e-11 | 63.2 |
| MS.gene75015.t1 | AT1G48920 | 28.249 | 177 | 115 | 5 | 77 | 249 | 290 | 458 | 9.26e-11 | 62.8 |
Find 80 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAACAGAGGAAAAGGAAAA+AGG | 0.287951 | 1.4:-52691790 | None:intergenic |
| ACTGGAAGAAGCAGGGGATT+TGG | 0.326987 | 1.4:+52692281 | MS.gene75015:CDS |
| AGTGGAAGATCTAGAGGATT+TGG | 0.327784 | 1.4:+52693037 | MS.gene75015:CDS |
| CATGTTTACCGCGCCATCTA+AGG | 0.341843 | 1.4:-52693107 | None:intergenic |
| CGTAGTGAGAACTCCCGTTT+TGG | 0.363398 | 1.4:+52692836 | MS.gene75015:CDS |
| TTCATGTTGGTAACCTTGCT+TGG | 0.366467 | 1.4:+52692933 | MS.gene75015:CDS |
| TCATGTTGGTAACCTTGCTT+GGG | 0.376247 | 1.4:+52692934 | MS.gene75015:CDS |
| TTTGGTGAGAATCCTCGTTT+TGG | 0.384959 | 1.4:+52692854 | MS.gene75015:CDS |
| CAAAGAATGCACTTCATACT+TGG | 0.389306 | 1.4:+52693659 | MS.gene75015:CDS |
| CATCAAAGGTATCTTCTTCC+TGG | 0.389538 | 1.4:-52691879 | None:intergenic |
| TCTTATTGTTAGCAGGTAGT+TGG | 0.394066 | 1.4:+52693593 | MS.gene75015:intron |
| TGCTTGGGGTGTTGACAACT+TGG | 0.399190 | 1.4:+52692949 | MS.gene75015:CDS |
| TGGTGAACAAGGACAGGTTT+TGG | 0.408469 | 1.4:+52692988 | MS.gene75015:CDS |
| AGTGCTATTCGAACCTTAGA+TGG | 0.414306 | 1.4:+52693094 | MS.gene75015:CDS |
| AGGTTTGAAATTAGGGTTGA+GGG | 0.430777 | 1.4:-52691770 | None:intergenic |
| CTTATTGTTAGCAGGTAGTT+GGG | 0.430904 | 1.4:+52693594 | MS.gene75015:intron |
| ACGAGGATTCTCACCAAAAC+GGG | 0.433272 | 1.4:-52692849 | None:intergenic |
| GTGATTTATGATAAGACTAC+TGG | 0.448929 | 1.4:+52692263 | MS.gene75015:CDS |
| TTGGCACTTGAGTCATTGTT+TGG | 0.449309 | 1.4:+52692968 | MS.gene75015:CDS |
| CCAACAAACAACCTCTGGTT+AGG | 0.451368 | 1.4:-52691928 | None:intergenic |
| TGCATTCTTTGACAAACAGT+TGG | 0.453583 | 1.4:-52693647 | None:intergenic |
| ACGAAGAGAAACAGAGGAAA+AGG | 0.456325 | 1.4:-52691797 | None:intergenic |
| CCTAACCAGAGGTTGTTTGT+TGG | 0.469968 | 1.4:+52691928 | MS.gene75015:CDS |
| CTATCTGAAGAACCACCTCT+TGG | 0.481583 | 1.4:-52692899 | None:intergenic |
| GGAGTGAAGAGAAACATTGA+GGG | 0.482925 | 1.4:-52691738 | None:intergenic |
| AACGAGGATTCTCACCAAAA+CGG | 0.486728 | 1.4:-52692850 | None:intergenic |
| CTCTGGTTAGGAGAGTAACT+AGG | 0.488332 | 1.4:-52691916 | None:intergenic |
| ATAAGACTACTGGAAGAAGC+AGG | 0.490077 | 1.4:+52692273 | MS.gene75015:CDS |
| ATTGTTTGGTGAACAAGGAC+AGG | 0.493154 | 1.4:+52692982 | MS.gene75015:CDS |
| GGGAGTGAAGAGAAACATTG+AGG | 0.496008 | 1.4:-52691739 | None:intergenic |
| TAGGGTTGAGGGAAAGAGAA+GGG | 0.515631 | 1.4:-52691759 | None:intergenic |
| AAACGCTGGGAATGTTGAAA+TGG | 0.516801 | 1.4:+52691999 | MS.gene75015:CDS |
| AAGCAAAGGTAATCTATGAC+AGG | 0.517595 | 1.4:+52693011 | MS.gene75015:CDS |
| GTAATCTATGACAGGGAAAG+TGG | 0.519710 | 1.4:+52693019 | MS.gene75015:CDS |
| TTAGGGTTGAGGGAAAGAGA+AGG | 0.521062 | 1.4:-52691760 | None:intergenic |
| GCGGCTGCTCAGCAGTTGAA+TGG | 0.528626 | 1.4:+52692338 | MS.gene75015:CDS |
| GAAGAAGATACCTTTGATGA+TGG | 0.530298 | 1.4:+52691883 | MS.gene75015:CDS |
| GCAGGTAGTTGGGAGTTATG+TGG | 0.532548 | 1.4:+52693604 | MS.gene75015:intron |
| TCTGAAGAACCACCTCTTGG+AGG | 0.535648 | 1.4:-52692896 | None:intergenic |
| GGTTACCAACAAACAACCTC+TGG | 0.538562 | 1.4:-52691933 | None:intergenic |
| TCTGGTTAGGAGAGTAACTA+GGG | 0.549336 | 1.4:-52691915 | None:intergenic |
| CGATGGGAAATAGACAAAGA+TGG | 0.554421 | 1.4:-52691820 | None:intergenic |
| CACTGTCAACACTGAAAGGA+AGG | 0.558406 | 1.4:-52691954 | None:intergenic |
| GAAGAGTGATGGAAGTACTA+AGG | 0.558474 | 1.4:-52691704 | None:intergenic |
| TGTTTCTTCTGAATTTGACC+AGG | 0.566886 | 1.4:+52691861 | MS.gene75015:CDS |
| AAGGTTTGAAATTAGGGTTG+AGG | 0.569323 | 1.4:-52691771 | None:intergenic |
| GGAAATTTACAGGTGGTGGA+TGG | 0.571010 | 1.4:+52692773 | MS.gene75015:intron |
| GAGTCATTGTTTGGTGAACA+AGG | 0.574217 | 1.4:+52692977 | MS.gene75015:CDS |
| GACTTTCAGTAGCGCTGATG+AGG | 0.578722 | 1.4:+52693066 | MS.gene75015:CDS |
| AGAGAATTGAGAGTGAATGC+TGG | 0.579689 | 1.4:+52692797 | MS.gene75015:CDS |
| TTTGGTGGTGATCGTTCTAG+AGG | 0.580010 | 1.4:+52692872 | MS.gene75015:CDS |
| TGAGCACTGTCAACACTGAA+AGG | 0.583654 | 1.4:-52691958 | None:intergenic |
| AGGGAAAGTGGAAGATCTAG+AGG | 0.591000 | 1.4:+52693031 | MS.gene75015:CDS |
| GGTATCATCACCATCATCAA+AGG | 0.592983 | 1.4:-52691893 | None:intergenic |
| TGTTACTATGTCTTCTGCTG+CGG | 0.604372 | 1.4:+52692307 | MS.gene75015:CDS |
| TAAGACTACTGGAAGAAGCA+GGG | 0.613089 | 1.4:+52692274 | MS.gene75015:CDS |
| CAACACGAGAAATGAAACGA+TGG | 0.613411 | 1.4:-52691837 | None:intergenic |
| AACACGAGAAATGAAACGAT+GGG | 0.615472 | 1.4:-52691836 | None:intergenic |
| TGGGAATGTTGAAATGGTTG+AGG | 0.621531 | 1.4:+52692005 | MS.gene75015:CDS |
| TTCTGCTGCGGAAGTTGAAG+CGG | 0.622597 | 1.4:+52692319 | MS.gene75015:CDS |
| AGTTGTCAACACCCCAAGCA+AGG | 0.628607 | 1.4:-52692946 | None:intergenic |
| CATGTTGGTAACCTTGCTTG+GGG | 0.635880 | 1.4:+52692935 | MS.gene75015:CDS |
| GGATGTTGCAGAGGTAGACA+TGG | 0.636407 | 1.4:-52691683 | None:intergenic |
| AACGGGAGTTCTCACTACGA+GGG | 0.636934 | 1.4:-52692832 | None:intergenic |
| AGCAAAGGTAATCTATGACA+GGG | 0.637693 | 1.4:+52693012 | MS.gene75015:CDS |
| AAGACTACTGGAAGAAGCAG+GGG | 0.638733 | 1.4:+52692275 | MS.gene75015:CDS |
| AAGTACTAAGGATGTTGCAG+AGG | 0.648638 | 1.4:-52691692 | None:intergenic |
| TCTAGAGGTCCTCCAAGAGG+TGG | 0.648673 | 1.4:+52692887 | MS.gene75015:CDS |
| AGATGGACGAAGAGAAACAG+AGG | 0.649696 | 1.4:-52691803 | None:intergenic |
| ACGGGAGTTCTCACTACGAG+GGG | 0.652442 | 1.4:-52692831 | None:intergenic |
| CAAGGTTACCAACATGAACA+CGG | 0.652532 | 1.4:-52692928 | None:intergenic |
| GAGTGAAGAGAAACATTGAG+GGG | 0.655321 | 1.4:-52691737 | None:intergenic |
| AGTGACAACCGTGTTCATGT+TGG | 0.658546 | 1.4:+52692920 | MS.gene75015:CDS |
| AAACGGGAGTTCTCACTACG+AGG | 0.662477 | 1.4:-52692833 | None:intergenic |
| CGTTCTAGAGGTCCTCCAAG+AGG | 0.680337 | 1.4:+52692884 | MS.gene75015:CDS |
| TATTCGAACCTTAGATGGCG+CGG | 0.688538 | 1.4:+52693099 | MS.gene75015:CDS |
| CTAGTTACTCTCCTAACCAG+AGG | 0.690578 | 1.4:+52691917 | MS.gene75015:CDS |
| CGGGAGTTCTCACTACGAGG+GGG | 0.698174 | 1.4:-52692830 | None:intergenic |
| GAACGATCACCACCAAAACG+AGG | 0.713335 | 1.4:-52692866 | None:intergenic |
| CTGGTTAGGAGAGTAACTAG+GGG | 0.742322 | 1.4:-52691914 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTTTCATAATTAAAAAAATT+AGG | - | chr1.4:52693231-52693250 | None:intergenic | 10.0% |
| !! | TGATAATTTATTATAAAGTT+TGG | + | chr1.4:52692075-52692094 | MS.gene75015:intron | 10.0% |
| !!! | ATATGTATTTTATTAAAATG+TGG | + | chr1.4:52692610-52692629 | MS.gene75015:intron | 10.0% |
| !!! | CTAATTTTTTTAATTATGAA+AGG | + | chr1.4:52693229-52693248 | MS.gene75015:intron | 10.0% |
| !! | GATTAATTTATTACAAAGTT+TGG | + | chr1.4:52692148-52692167 | MS.gene75015:intron | 15.0% |
| !! | TTTAATAGTTACAAGTAATT+AGG | + | chr1.4:52692572-52692591 | MS.gene75015:intron | 15.0% |
| !!! | ATTTTATTAAAATGTGGATA+AGG | + | chr1.4:52692616-52692635 | MS.gene75015:intron | 15.0% |
| !!! | GTGAATTTAATGTTAAATTT+TGG | + | chr1.4:52692223-52692242 | MS.gene75015:intron | 15.0% |
| !!! | TTTTATTAAAATGTGGATAA+GGG | + | chr1.4:52692617-52692636 | MS.gene75015:intron | 15.0% |
| !! | CTTAGATGTTATAAACAAAA+TGG | - | chr1.4:52692742-52692761 | None:intergenic | 20.0% |
| !! | TAGAACATTGCATATTATAT+AGG | - | chr1.4:52693510-52693529 | None:intergenic | 20.0% |
| !! | TATATTATGTATTTAACCAC+TGG | + | chr1.4:52693337-52693356 | MS.gene75015:intron | 20.0% |
| !!! | AAACAATTTTGGAAATTTAC+AGG | + | chr1.4:52692763-52692782 | MS.gene75015:intron | 20.0% |
| !!! | CATTTTGTTTATAACATCTA+AGG | + | chr1.4:52692740-52692759 | MS.gene75015:intron | 20.0% |
| !!! | TTATAAAGTTTGGCATTTTA+TGG | + | chr1.4:52692085-52692104 | MS.gene75015:intron | 20.0% |
| ! | AGATTATGAGTTAGAATTCA+GGG | + | chr1.4:52693203-52693222 | MS.gene75015:intron | 25.0% |
| ! | AGTTGTTTGAAAATTGAGTA+TGG | + | chr1.4:52692429-52692448 | MS.gene75015:intron | 25.0% |
| ! | ATTGCATATTATATAGGTGA+AGG | - | chr1.4:52693504-52693523 | None:intergenic | 25.0% |
| ! | TAAAATACATATACCCCTAT+AGG | - | chr1.4:52692602-52692621 | None:intergenic | 25.0% |
| ! | TAGATTATGAGTTAGAATTC+AGG | + | chr1.4:52693202-52693221 | MS.gene75015:intron | 25.0% |
| ! | TGAAAATTGAGTATGGTAAT+TGG | + | chr1.4:52692436-52692455 | MS.gene75015:intron | 25.0% |
| !! | AACATCTAAGGAAACAATTT+TGG | + | chr1.4:52692752-52692771 | MS.gene75015:intron | 25.0% |
| !! | AAGGAAAAAGGTTTGAAATT+AGG | - | chr1.4:52691781-52691800 | None:intergenic | 25.0% |
| !! | ACCTTTTGGATGAAAAATAA+TGG | + | chr1.4:52692193-52692212 | MS.gene75015:intron | 25.0% |
| !! | AGGAAAAAGGTTTGAAATTA+GGG | - | chr1.4:52691780-52691799 | None:intergenic | 25.0% |
| !! | CCAATAATTTTCATCCAAAA+GGG | - | chr1.4:52692123-52692142 | None:intergenic | 25.0% |
| !! | CCTTTTGGATGAAAAATAAT+GGG | + | chr1.4:52692194-52692213 | MS.gene75015:intron | 25.0% |
| !! | CCTTTTGGATGAAAATTATT+GGG | + | chr1.4:52692121-52692140 | MS.gene75015:intron | 25.0% |
| !! | TTGGCATTTTATGGTTTAAT+TGG | + | chr1.4:52692094-52692113 | MS.gene75015:intron | 25.0% |
| !! | TTGTTTAATTGAGTACCTTT+TGG | + | chr1.4:52692179-52692198 | MS.gene75015:intron | 25.0% |
| !!! | ATCATCTGGTTTTTTTTTGT+AGG | + | chr1.4:52693368-52693387 | MS.gene75015:intron | 25.0% |
| !!! | TGTTTATTTTCCTCATGAAT+TGG | + | chr1.4:52693554-52693573 | MS.gene75015:intron | 25.0% |
| !!! | TTTGGAATTTGTGTTTTTTC+AGG | + | chr1.4:52692241-52692260 | MS.gene75015:intron | 25.0% |
| !!! | TTTTTTTTGTAGGACTTGAA+TGG | + | chr1.4:52693378-52693397 | MS.gene75015:intron | 25.0% |
| AAGTAATTAGGTACTCCTAT+AGG | + | chr1.4:52692584-52692603 | MS.gene75015:intron | 30.0% | |
| AATATGCAATGTTCTAATGC+AGG | + | chr1.4:52693514-52693533 | MS.gene75015:intron | 30.0% | |
| ACCTATGTTACAAATGACTT+TGG | + | chr1.4:52692716-52692735 | MS.gene75015:intron | 30.0% | |
| AGTAATTAGGTACTCCTATA+GGG | + | chr1.4:52692585-52692604 | MS.gene75015:intron | 30.0% | |
| CATATTATATAGGTGAAGGA+TGG | - | chr1.4:52693500-52693519 | None:intergenic | 30.0% | |
| GTAACTCTTATATCTGAGTT+TGG | + | chr1.4:52692677-52692696 | MS.gene75015:intron | 30.0% | |
| GTGATTTATGATAAGACTAC+TGG | + | chr1.4:52692263-52692282 | MS.gene75015:CDS | 30.0% | |
| TCTAACATCTTATTGTTAGC+AGG | + | chr1.4:52693586-52693605 | MS.gene75015:intron | 30.0% | |
| ! | CCCAATAATTTTCATCCAAA+AGG | - | chr1.4:52692124-52692143 | None:intergenic | 30.0% |
| ! | CCCTTTTGGATGAAAATTAT+CGG | + | chr1.4:52692047-52692066 | MS.gene75015:intron | 30.0% |
| ! | CCCTTTTGGATGAAAATTAT+TGG | + | chr1.4:52692047-52692066 | MS.gene75015:intron | 30.0% |
| ! | CCGATAATTTTCATCCAAAA+GGG | - | chr1.4:52692050-52692069 | None:intergenic | 30.0% |
| ! | CCTTTTGGATGAAAATTATC+GGG | + | chr1.4:52692048-52692067 | MS.gene75015:intron | 30.0% |
| ! | TCTTTACAAAGATACCCTTT+TGG | + | chr1.4:52692033-52692052 | MS.gene75015:intron | 30.0% |
| !! | CAATTTTGGAAATTTACAGG+TGG | + | chr1.4:52692766-52692785 | MS.gene75015:intron | 30.0% |
| !! | CCCATTATTTTTCATCCAAA+AGG | - | chr1.4:52692197-52692216 | None:intergenic | 30.0% |
| !! | GATGAAAAATAATGGGTTTG+TGG | + | chr1.4:52692201-52692220 | MS.gene75015:intron | 30.0% |
| AACACGAGAAATGAAACGAT+GGG | - | chr1.4:52691839-52691858 | None:intergenic | 35.0% | |
| AACATTCAGTCCAATTCATG+AGG | - | chr1.4:52693567-52693586 | None:intergenic | 35.0% | |
| AAGCAAAGGTAATCTATGAC+AGG | + | chr1.4:52693011-52693030 | MS.gene75015:CDS | 35.0% | |
| AATCCTCAAAATTGACGCTT+TGG | - | chr1.4:52693438-52693457 | None:intergenic | 35.0% | |
| ACAATGAGTAGATCTGGATA+AGG | - | chr1.4:52692659-52692678 | None:intergenic | 35.0% | |
| ACCTGCATCATATTGAATAG+AGG | - | chr1.4:52693142-52693161 | None:intergenic | 35.0% | |
| AGAGTTACAATGAGTAGATC+TGG | - | chr1.4:52692665-52692684 | None:intergenic | 35.0% | |
| AGCAAAGGTAATCTATGACA+GGG | + | chr1.4:52693012-52693031 | MS.gene75015:CDS | 35.0% | |
| CAAAGAATGCACTTCATACT+TGG | + | chr1.4:52693659-52693678 | MS.gene75015:CDS | 35.0% | |
| CTTATTGTTAGCAGGTAGTT+GGG | + | chr1.4:52693594-52693613 | MS.gene75015:intron | 35.0% | |
| GAAACAGAGGAAAAGGAAAA+AGG | - | chr1.4:52691793-52691812 | None:intergenic | 35.0% | |
| GAAGAAGATACCTTTGATGA+TGG | + | chr1.4:52691883-52691902 | MS.gene75015:CDS | 35.0% | |
| GCATCATATTGAATAGAGGA+GGG | - | chr1.4:52693138-52693157 | None:intergenic | 35.0% | |
| GCCAAAGTCATTTGTAACAT+AGG | - | chr1.4:52692720-52692739 | None:intergenic | 35.0% | |
| GTAATTAGGTACTCCTATAG+GGG | + | chr1.4:52692586-52692605 | MS.gene75015:intron | 35.0% | |
| TCAACTCTTCATGTGTGAAT+TGG | + | chr1.4:52693301-52693320 | MS.gene75015:intron | 35.0% | |
| TCCTCTATTCAATATGATGC+AGG | + | chr1.4:52693138-52693157 | MS.gene75015:intron | 35.0% | |
| TCTTATTGTTAGCAGGTAGT+TGG | + | chr1.4:52693593-52693612 | MS.gene75015:intron | 35.0% | |
| TGCATCATATTGAATAGAGG+AGG | - | chr1.4:52693139-52693158 | None:intergenic | 35.0% | |
| TGCATTCTTTGACAAACAGT+TGG | - | chr1.4:52693650-52693669 | None:intergenic | 35.0% | |
| TGTGAGCAAATTGTGTACTA+TGG | - | chr1.4:52692522-52692541 | None:intergenic | 35.0% | |
| TGTTTCTTCTGAATTTGACC+AGG | + | chr1.4:52691861-52691880 | MS.gene75015:CDS | 35.0% | |
| ! | AAGGTTTGAAATTAGGGTTG+AGG | - | chr1.4:52691774-52691793 | None:intergenic | 35.0% |
| ! | AGGTTTGAAATTAGGGTTGA+GGG | - | chr1.4:52691773-52691792 | None:intergenic | 35.0% |
| ! | CCCGATAATTTTCATCCAAA+AGG | - | chr1.4:52692051-52692070 | None:intergenic | 35.0% |
| ! | GGTTTAATTGGATACCCTTT+TGG | + | chr1.4:52692106-52692125 | MS.gene75015:intron | 35.0% |
| ! | TGTGGATAAGGGTATAACTA+TGG | + | chr1.4:52692628-52692647 | MS.gene75015:intron | 35.0% |
| !! | CTGAGATTTTTGAAAACGCT+GGG | + | chr1.4:52691986-52692005 | MS.gene75015:CDS | 35.0% |
| !! | TTTTGGAAATTTACAGGTGG+TGG | + | chr1.4:52692769-52692788 | MS.gene75015:intron | 35.0% |
| AAACGCTGGGAATGTTGAAA+TGG | + | chr1.4:52691999-52692018 | MS.gene75015:CDS | 40.0% | |
| AACGAGGATTCTCACCAAAA+CGG | - | chr1.4:52692853-52692872 | None:intergenic | 40.0% | |
| AAGTACTAAGGATGTTGCAG+AGG | - | chr1.4:52691695-52691714 | None:intergenic | 40.0% | |
| ACGAAGAGAAACAGAGGAAA+AGG | - | chr1.4:52691800-52691819 | None:intergenic | 40.0% | |
| AGAGAATTGAGAGTGAATGC+TGG | + | chr1.4:52692797-52692816 | MS.gene75015:CDS | 40.0% | |
| AGTGGAAGATCTAGAGGATT+TGG | + | chr1.4:52693037-52693056 | MS.gene75015:CDS | 40.0% | |
| ATAAGACTACTGGAAGAAGC+AGG | + | chr1.4:52692273-52692292 | MS.gene75015:CDS | 40.0% | |
| CAACACGAGAAATGAAACGA+TGG | - | chr1.4:52691840-52691859 | None:intergenic | 40.0% | |
| CAAGGTTACCAACATGAACA+CGG | - | chr1.4:52692931-52692950 | None:intergenic | 40.0% | |
| CGATGGGAAATAGACAAAGA+TGG | - | chr1.4:52691823-52691842 | None:intergenic | 40.0% | |
| CTTGATCGGGTATAGATGAA+AGG | - | chr1.4:52693464-52693483 | None:intergenic | 40.0% | |
| GACGCAAAACTACAACTCAA+TGG | - | chr1.4:52693280-52693299 | None:intergenic | 40.0% | |
| GAGTGAAGAGAAACATTGAG+GGG | - | chr1.4:52691740-52691759 | None:intergenic | 40.0% | |
| GGAGTGAAGAGAAACATTGA+GGG | - | chr1.4:52691741-52691760 | None:intergenic | 40.0% | |
| GGTATCATCACCATCATCAA+AGG | - | chr1.4:52691896-52691915 | None:intergenic | 40.0% | |
| GTAATCTATGACAGGGAAAG+TGG | + | chr1.4:52693019-52693038 | MS.gene75015:CDS | 40.0% | |
| TAAGACTACTGGAAGAAGCA+GGG | + | chr1.4:52692274-52692293 | MS.gene75015:CDS | 40.0% | |
| TATGAAAGGGTTAAGTCCCT+TGG | + | chr1.4:52693243-52693262 | MS.gene75015:intron | 40.0% | |
| TCTGGTTAGGAGAGTAACTA+GGG | - | chr1.4:52691918-52691937 | None:intergenic | 40.0% | |
| TGCAGGACATCTTAGAATCA+TGG | + | chr1.4:52693531-52693550 | MS.gene75015:intron | 40.0% | |
| TGGGAATGTTGAAATGGTTG+AGG | + | chr1.4:52692005-52692024 | MS.gene75015:CDS | 40.0% | |
| TGTTACTATGTCTTCTGCTG+CGG | + | chr1.4:52692307-52692326 | MS.gene75015:CDS | 40.0% | |
| TTGGCACTTGAGTCATTGTT+TGG | + | chr1.4:52692968-52692987 | MS.gene75015:CDS | 40.0% | |
| ! | AGTGCTATTCGAACCTTAGA+TGG | + | chr1.4:52693094-52693113 | MS.gene75015:CDS | 40.0% |
| ! | ATTGTTTGGTGAACAAGGAC+AGG | + | chr1.4:52692982-52693001 | MS.gene75015:CDS | 40.0% |
| ! | GAAACATTGAGGGGAGTTTT+TGG | - | chr1.4:52691731-52691750 | None:intergenic | 40.0% |
| ! | GAGTCATTGTTTGGTGAACA+AGG | + | chr1.4:52692977-52692996 | MS.gene75015:CDS | 40.0% |
| ! | TTTGGTGAGAATCCTCGTTT+TGG | + | chr1.4:52692854-52692873 | MS.gene75015:CDS | 40.0% |
| !! | AATGGCTTTGAATCCTCCAA+GGG | - | chr1.4:52693262-52693281 | None:intergenic | 40.0% |
| !! | AGACCAAAGCGTCAATTTTG+AGG | + | chr1.4:52693432-52693451 | MS.gene75015:intron | 40.0% |
| !! | CATCAAAGGTATCTTCTTCC+TGG | - | chr1.4:52691882-52691901 | None:intergenic | 40.0% |
| !! | GAAGAGTGATGGAAGTACTA+AGG | - | chr1.4:52691707-52691726 | None:intergenic | 40.0% |
| !! | GCTGAGATTTTTGAAAACGC+TGG | + | chr1.4:52691985-52692004 | MS.gene75015:CDS | 40.0% |
| !! | TCATGTTGGTAACCTTGCTT+GGG | + | chr1.4:52692934-52692953 | MS.gene75015:CDS | 40.0% |
| !! | TTCATGTTGGTAACCTTGCT+TGG | + | chr1.4:52692933-52692952 | MS.gene75015:CDS | 40.0% |
| !!! | GAGTTTTTGGTGAAGAGTGA+TGG | - | chr1.4:52691718-52691737 | None:intergenic | 40.0% |
| AAGACTACTGGAAGAAGCAG+GGG | + | chr1.4:52692275-52692294 | MS.gene75015:CDS | 45.0% | |
| ACGAGGATTCTCACCAAAAC+GGG | - | chr1.4:52692852-52692871 | None:intergenic | 45.0% | |
| AGATGGACGAAGAGAAACAG+AGG | - | chr1.4:52691806-52691825 | None:intergenic | 45.0% | |
| AGGGAAAGTGGAAGATCTAG+AGG | + | chr1.4:52693031-52693050 | MS.gene75015:CDS | 45.0% | |
| AGTGACAACCGTGTTCATGT+TGG | + | chr1.4:52692920-52692939 | MS.gene75015:CDS | 45.0% | |
| CACTGTCAACACTGAAAGGA+AGG | - | chr1.4:52691957-52691976 | None:intergenic | 45.0% | |
| CATCTATACCCGATCAAGAG+AGG | + | chr1.4:52693466-52693485 | MS.gene75015:intron | 45.0% | |
| CCAACAAACAACCTCTGGTT+AGG | - | chr1.4:52691931-52691950 | None:intergenic | 45.0% | |
| CCTAACCAGAGGTTGTTTGT+TGG | + | chr1.4:52691928-52691947 | MS.gene75015:CDS | 45.0% | |
| CTAGTTACTCTCCTAACCAG+AGG | + | chr1.4:52691917-52691936 | MS.gene75015:CDS | 45.0% | |
| CTATCTGAAGAACCACCTCT+TGG | - | chr1.4:52692902-52692921 | None:intergenic | 45.0% | |
| CTCTGGTTAGGAGAGTAACT+AGG | - | chr1.4:52691919-52691938 | None:intergenic | 45.0% | |
| CTGGTTAGGAGAGTAACTAG+GGG | - | chr1.4:52691917-52691936 | None:intergenic | 45.0% | |
| GGGAGTGAAGAGAAACATTG+AGG | - | chr1.4:52691742-52691761 | None:intergenic | 45.0% | |
| GGTTACCAACAAACAACCTC+TGG | - | chr1.4:52691936-52691955 | None:intergenic | 45.0% | |
| TACTATCAGCTGGTGAGACT+CGG | - | chr1.4:52693413-52693432 | None:intergenic | 45.0% | |
| TAGGGTTGAGGGAAAGAGAA+GGG | - | chr1.4:52691762-52691781 | None:intergenic | 45.0% | |
| TATTCGAACCTTAGATGGCG+CGG | + | chr1.4:52693099-52693118 | MS.gene75015:CDS | 45.0% | |
| TTAGGGTTGAGGGAAAGAGA+AGG | - | chr1.4:52691763-52691782 | None:intergenic | 45.0% | |
| ! | TGAGCACTGTCAACACTGAA+AGG | - | chr1.4:52691961-52691980 | None:intergenic | 45.0% |
| ! | TGGTGAACAAGGACAGGTTT+TGG | + | chr1.4:52692988-52693007 | MS.gene75015:CDS | 45.0% |
| !! | CAATGGCTTTGAATCCTCCA+AGG | - | chr1.4:52693263-52693282 | None:intergenic | 45.0% |
| !! | CATGTTGGTAACCTTGCTTG+GGG | + | chr1.4:52692935-52692954 | MS.gene75015:CDS | 45.0% |
| !! | GGAAATTTACAGGTGGTGGA+TGG | + | chr1.4:52692773-52692792 | MS.gene75015:intron | 45.0% |
| !! | TTTGGTGGTGATCGTTCTAG+AGG | + | chr1.4:52692872-52692891 | MS.gene75015:CDS | 45.0% |
| !!! | AGGACAGGTTTTGGAAGCAA+AGG | + | chr1.4:52692997-52693016 | MS.gene75015:CDS | 45.0% |
| !! | TTTCATAATTAAAAAAATTA+GGG | - | chr1.4:52693230-52693249 | None:intergenic | 5.0% |
| !!! | TAATTTTTTTAATTATGAAA+GGG | + | chr1.4:52693230-52693249 | MS.gene75015:intron | 5.0% |
| AAACGGGAGTTCTCACTACG+AGG | - | chr1.4:52692836-52692855 | None:intergenic | 50.0% | |
| AACGGGAGTTCTCACTACGA+GGG | - | chr1.4:52692835-52692854 | None:intergenic | 50.0% | |
| ACTGGAAGAAGCAGGGGATT+TGG | + | chr1.4:52692281-52692300 | MS.gene75015:CDS | 50.0% | |
| AGTTGTCAACACCCCAAGCA+AGG | - | chr1.4:52692949-52692968 | None:intergenic | 50.0% | |
| CACTGGAGTCTTGCATCATC+TGG | + | chr1.4:52693354-52693373 | MS.gene75015:intron | 50.0% | |
| CAGATGATGCAAGACTCCAG+TGG | - | chr1.4:52693356-52693375 | None:intergenic | 50.0% | |
| CATGTTTACCGCGCCATCTA+AGG | - | chr1.4:52693110-52693129 | None:intergenic | 50.0% | |
| CGCTTTGGTCTACTATCAGC+TGG | - | chr1.4:52693423-52693442 | None:intergenic | 50.0% | |
| GAAAGGGTTAAGTCCCTTGG+AGG | + | chr1.4:52693246-52693265 | MS.gene75015:intron | 50.0% | |
| GAACGATCACCACCAAAACG+AGG | - | chr1.4:52692869-52692888 | None:intergenic | 50.0% | |
| GCAGGTAGTTGGGAGTTATG+TGG | + | chr1.4:52693604-52693623 | MS.gene75015:intron | 50.0% | |
| GTACCGAGTCCTCTCTTGAT+CGG | - | chr1.4:52693478-52693497 | None:intergenic | 50.0% | |
| TACCCGATCAAGAGAGGACT+CGG | + | chr1.4:52693472-52693491 | MS.gene75015:intron | 50.0% | |
| TACCGAGTCCTCTCTTGATC+GGG | - | chr1.4:52693477-52693496 | None:intergenic | 50.0% | |
| TCTGAAGAACCACCTCTTGG+AGG | - | chr1.4:52692899-52692918 | None:intergenic | 50.0% | |
| TTCTGCTGCGGAAGTTGAAG+CGG | + | chr1.4:52692319-52692338 | MS.gene75015:CDS | 50.0% | |
| ! | CGTAGTGAGAACTCCCGTTT+TGG | + | chr1.4:52692836-52692855 | MS.gene75015:CDS | 50.0% |
| ! | GGTGAGAATCCTCGTTTTGG+TGG | + | chr1.4:52692857-52692876 | MS.gene75015:CDS | 50.0% |
| !! | GACTTTCAGTAGCGCTGATG+AGG | + | chr1.4:52693066-52693085 | MS.gene75015:CDS | 50.0% |
| !! | TGCTTGGGGTGTTGACAACT+TGG | + | chr1.4:52692949-52692968 | MS.gene75015:CDS | 50.0% |
| ACGGGAGTTCTCACTACGAG+GGG | - | chr1.4:52692834-52692853 | None:intergenic | 55.0% | |
| TCTAGAGGTCCTCCAAGAGG+TGG | + | chr1.4:52692887-52692906 | MS.gene75015:CDS | 55.0% | |
| !! | CGTTCTAGAGGTCCTCCAAG+AGG | + | chr1.4:52692884-52692903 | MS.gene75015:CDS | 55.0% |
| CGGGAGTTCTCACTACGAGG+GGG | - | chr1.4:52692833-52692852 | None:intergenic | 60.0% | |
| GAGTTCTCACTACGAGGGGG+AGG | - | chr1.4:52692830-52692849 | None:intergenic | 60.0% | |
| GCGGCTGCTCAGCAGTTGAA+TGG | + | chr1.4:52692338-52692357 | MS.gene75015:CDS | 60.0% | |
| TTCTCACTACGAGGGGGAGG+TGG | - | chr1.4:52692827-52692846 | None:intergenic | 60.0% | |
| TCACTACGAGGGGGAGGTGG+TGG | - | chr1.4:52692824-52692843 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 52691685 | 52693703 | 52691685 | ID=MS.gene75015 |
| chr1.4 | mRNA | 52691685 | 52693703 | 52691685 | ID=MS.gene75015.t1;Parent=MS.gene75015 |
| chr1.4 | exon | 52691685 | 52692026 | 52691685 | ID=MS.gene75015.t1.exon1;Parent=MS.gene75015.t1 |
| chr1.4 | CDS | 52691685 | 52692026 | 52691685 | ID=cds.MS.gene75015.t1;Parent=MS.gene75015.t1 |
| chr1.4 | exon | 52692263 | 52692364 | 52692263 | ID=MS.gene75015.t1.exon2;Parent=MS.gene75015.t1 |
| chr1.4 | CDS | 52692263 | 52692364 | 52692263 | ID=cds.MS.gene75015.t1;Parent=MS.gene75015.t1 |
| chr1.4 | exon | 52692785 | 52693120 | 52692785 | ID=MS.gene75015.t1.exon3;Parent=MS.gene75015.t1 |
| chr1.4 | CDS | 52692785 | 52693120 | 52692785 | ID=cds.MS.gene75015.t1;Parent=MS.gene75015.t1 |
| chr1.4 | exon | 52693608 | 52693703 | 52693608 | ID=MS.gene75015.t1.exon4;Parent=MS.gene75015.t1 |
| chr1.4 | CDS | 52693608 | 52693703 | 52693608 | ID=cds.MS.gene75015.t1;Parent=MS.gene75015.t1 |
| Gene Sequence |
| Protein sequence |
