Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75704.t1 | XP_024633668.1 | 88.6 | 185 | 19 | 1 | 1 | 183 | 1 | 185 | 3.90E-71 | 277.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75704.t1 | O64864 | 44.1 | 118 | 64 | 1 | 7 | 122 | 12 | 129 | 3.2e-26 | 119.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75704.t1 | A0A396IUN5 | 88.6 | 185 | 19 | 1 | 1 | 183 | 1 | 185 | 2.8e-71 | 277.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049298 | MS.gene75704 | 0.838566 | 2.67E-57 | -1.69E-46 |
| MS.gene052209 | MS.gene75704 | 0.812996 | 3.20E-51 | -1.69E-46 |
| MS.gene054662 | MS.gene75704 | 0.814293 | 1.66E-51 | -1.69E-46 |
| MS.gene054941 | MS.gene75704 | 0.823993 | 1.03E-53 | -1.69E-46 |
| MS.gene055787 | MS.gene75704 | 0.803495 | 3.39E-49 | -1.69E-46 |
| MS.gene056387 | MS.gene75704 | -0.801372 | 9.29E-49 | -1.69E-46 |
| MS.gene05652 | MS.gene75704 | 0.814912 | 1.21E-51 | -1.69E-46 |
| MS.gene057669 | MS.gene75704 | 0.842534 | 2.44E-58 | -1.69E-46 |
| MS.gene058853 | MS.gene75704 | 0.801868 | 7.35E-49 | -1.69E-46 |
| MS.gene05926 | MS.gene75704 | 0.824458 | 7.99E-54 | -1.69E-46 |
| MS.gene059616 | MS.gene75704 | 0.813478 | 2.51E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene75704 | MS.gene59892 | PPI |
| MS.gene75704 | MS.gene016280 | PPI |
| MS.gene75704 | MS.gene067247 | PPI |
| MS.gene75704 | MS.gene066915 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75704.t1 | MTR_3g083760 | 82.673 | 202 | 16 | 1 | 1 | 183 | 1 | 202 | 1.18e-94 | 273 |
| MS.gene75704.t1 | MTR_3g083760 | 87.413 | 143 | 16 | 1 | 1 | 141 | 1 | 143 | 6.48e-81 | 236 |
| MS.gene75704.t1 | MTR_8g085560 | 50.829 | 181 | 83 | 3 | 9 | 183 | 14 | 194 | 5.45e-66 | 201 |
| MS.gene75704.t1 | MTR_7g014880 | 42.222 | 180 | 93 | 3 | 8 | 176 | 12 | 191 | 3.99e-41 | 137 |
| MS.gene75704.t1 | MTR_8g446830 | 39.487 | 195 | 105 | 6 | 1 | 182 | 1 | 195 | 1.05e-36 | 126 |
| MS.gene75704.t1 | MTR_1g103450 | 31.333 | 150 | 79 | 4 | 12 | 161 | 15 | 140 | 7.10e-13 | 63.5 |
| MS.gene75704.t1 | MTR_1g103490 | 36.667 | 90 | 55 | 2 | 12 | 101 | 10 | 97 | 2.34e-12 | 62.0 |
| MS.gene75704.t1 | MTR_1g103470 | 39.189 | 74 | 42 | 2 | 28 | 101 | 25 | 95 | 1.66e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75704.t1 | AT1G55260 | 43.258 | 178 | 93 | 4 | 8 | 181 | 53 | 226 | 6.91e-44 | 145 |
| MS.gene75704.t1 | AT1G55260 | 43.258 | 178 | 90 | 5 | 8 | 181 | 53 | 223 | 2.21e-43 | 144 |
| MS.gene75704.t1 | AT2G44300 | 39.796 | 196 | 96 | 5 | 7 | 183 | 11 | 203 | 1.38e-40 | 136 |
| MS.gene75704.t1 | AT2G44290 | 38.579 | 197 | 96 | 4 | 9 | 183 | 11 | 204 | 1.60e-40 | 136 |
| MS.gene75704.t1 | AT3G58550 | 38.926 | 149 | 84 | 4 | 4 | 145 | 9 | 157 | 6.51e-30 | 108 |
| MS.gene75704.t1 | AT1G03103 | 31.915 | 94 | 64 | 0 | 8 | 101 | 2 | 95 | 1.91e-14 | 68.2 |
| MS.gene75704.t1 | AT5G09370 | 37.736 | 106 | 61 | 2 | 24 | 127 | 21 | 123 | 3.16e-14 | 66.6 |
| MS.gene75704.t1 | AT5G09370 | 37.600 | 125 | 64 | 5 | 24 | 138 | 21 | 141 | 3.74e-14 | 67.0 |
| MS.gene75704.t1 | AT2G48130 | 36.559 | 93 | 57 | 2 | 10 | 101 | 8 | 99 | 4.19e-14 | 67.4 |
| MS.gene75704.t1 | AT2G48130 | 36.559 | 93 | 57 | 2 | 10 | 101 | 8 | 99 | 4.19e-14 | 67.4 |
| MS.gene75704.t1 | AT2G48130 | 36.559 | 93 | 57 | 2 | 10 | 101 | 8 | 99 | 4.19e-14 | 67.4 |
| MS.gene75704.t1 | AT2G48130 | 36.559 | 93 | 57 | 2 | 10 | 101 | 8 | 99 | 4.19e-14 | 67.4 |
| MS.gene75704.t1 | AT2G48130 | 36.559 | 93 | 57 | 2 | 10 | 101 | 8 | 99 | 4.19e-14 | 67.4 |
| MS.gene75704.t1 | AT2G48130 | 36.559 | 93 | 57 | 2 | 10 | 101 | 8 | 99 | 4.19e-14 | 67.4 |
| MS.gene75704.t1 | AT5G09370 | 39.175 | 97 | 54 | 2 | 24 | 118 | 21 | 114 | 6.05e-14 | 66.6 |
| MS.gene75704.t1 | AT1G73890 | 39.189 | 74 | 45 | 0 | 31 | 104 | 30 | 103 | 7.41e-14 | 67.0 |
| MS.gene75704.t1 | AT3G22600 | 28.188 | 149 | 95 | 5 | 10 | 150 | 6 | 150 | 2.51e-12 | 62.4 |
| MS.gene75704.t1 | AT4G14815 | 30.000 | 90 | 62 | 1 | 12 | 101 | 7 | 95 | 4.42e-11 | 58.9 |
Find 51 sgRNAs with CRISPR-Local
Find 81 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATAATTACCGCTGGAAAT+AGG | 0.158824 | 3.3:+70285781 | None:intergenic |
| TCTTATCAAGGACTTGTTTA+AGG | 0.173161 | 3.3:+70286473 | None:intergenic |
| ACCTTAGCTTCAGGGGATTT+AGG | 0.238114 | 3.3:+70285847 | None:intergenic |
| AATAATTACCGCTGGAAATA+GGG | 0.274317 | 3.3:+70285782 | None:intergenic |
| AAGGAGGTGGCTGGTGGCAG+AGG | 0.280788 | 3.3:-70285622 | MS.gene75704:CDS |
| ATTCAACTTGATACCAAGTT+TGG | 0.282616 | 3.3:+70286408 | None:intergenic |
| GATAAACTTGTTACTCTTGC+TGG | 0.316761 | 3.3:-70286553 | MS.gene75704:CDS |
| CCTTCAAACACCTTAGCTTC+AGG | 0.355634 | 3.3:+70285838 | None:intergenic |
| TTCAACTTGATACCAAGTTT+GGG | 0.358716 | 3.3:+70286409 | None:intergenic |
| ACACATTCAGTTATATTAGA+TGG | 0.359046 | 3.3:+70286346 | None:intergenic |
| TGGATTGGGAAGGAGGTGGC+TGG | 0.375917 | 3.3:-70285631 | MS.gene75704:CDS |
| AGGGGAGGAACTGTTTGTTT+TGG | 0.377595 | 3.3:+70285801 | None:intergenic |
| GAAAAGAGTGGTGGTGGATT+GGG | 0.380896 | 3.3:-70285645 | MS.gene75704:CDS |
| TGCATTATTATTTCTACTGT+TGG | 0.388007 | 3.3:-70286623 | MS.gene75704:CDS |
| TTATTATTTCTACTGTTGGC+TGG | 0.403176 | 3.3:-70286619 | MS.gene75704:CDS |
| CTTATCAAGGACTTGTTTAA+GGG | 0.407090 | 3.3:+70286474 | None:intergenic |
| GATGGTATGTGACAAGCGTT+TGG | 0.413443 | 3.3:+70286364 | None:intergenic |
| GGAAAAGAGTGGTGGTGGAT+TGG | 0.435272 | 3.3:-70285646 | MS.gene75704:CDS |
| GCTAAGGTGTTTGAAGGACT+TGG | 0.437073 | 3.3:-70285832 | MS.gene75704:CDS |
| GAGGTGGCTGGTGGCAGAGG+TGG | 0.447551 | 3.3:-70285619 | MS.gene75704:CDS |
| AAGTGAGATATGAAAAGAAA+TGG | 0.450601 | 3.3:+70285582 | None:intergenic |
| GGAAGTACAACAATCTATAG+TGG | 0.456166 | 3.3:+70286495 | None:intergenic |
| CTTCAAACACCTTAGCTTCA+GGG | 0.472455 | 3.3:+70285839 | None:intergenic |
| ACCTAAATCCCCTGAAGCTA+AGG | 0.474094 | 3.3:-70285848 | MS.gene75704:CDS |
| CCTGAAGCTAAGGTGTTTGA+AGG | 0.476875 | 3.3:-70285838 | MS.gene75704:CDS |
| GATCGCAATGACCCCAAACT+TGG | 0.492547 | 3.3:-70286421 | MS.gene75704:CDS |
| GTGGTGGATTGGGAAGGAGG+TGG | 0.495091 | 3.3:-70285635 | MS.gene75704:CDS |
| GTGGTGGTGGATTGGGAAGG+AGG | 0.496077 | 3.3:-70285638 | MS.gene75704:CDS |
| TCTGAGGAAAAGAGTGGTGG+TGG | 0.499326 | 3.3:-70285651 | MS.gene75704:CDS |
| TGTTTAAGGTTCTGCTGAGA+GGG | 0.503753 | 3.3:-70285688 | MS.gene75704:intron |
| GAAGTACAACAATCTATAGT+GGG | 0.507467 | 3.3:+70286496 | None:intergenic |
| ATTGGGAAGGAGGTGGCTGG+TGG | 0.530641 | 3.3:-70285628 | MS.gene75704:CDS |
| TCAAACTTGAACTTCAAGCT+AGG | 0.546383 | 3.3:+70285553 | None:intergenic |
| TTCAAACACCTTAGCTTCAG+GGG | 0.554009 | 3.3:+70285840 | None:intergenic |
| ATAATTACCGCTGGAAATAG+GGG | 0.565206 | 3.3:+70285783 | None:intergenic |
| GGTTGTCTTCCATACGTTGG+TGG | 0.578596 | 3.3:-70286532 | MS.gene75704:CDS |
| GCTGGTTGTCTTCCATACGT+TGG | 0.583066 | 3.3:-70286535 | MS.gene75704:CDS |
| TTGGCACTACCACCAACGTA+TGG | 0.586024 | 3.3:+70286523 | None:intergenic |
| TGGAAGCTGTACAGCAAGAG+TGG | 0.593369 | 3.3:+70286384 | None:intergenic |
| TCAACTTGATACCAAGTTTG+GGG | 0.608436 | 3.3:+70286410 | None:intergenic |
| ATGTTTAAGGTTCTGCTGAG+AGG | 0.614875 | 3.3:-70285689 | MS.gene75704:intron |
| AGAGTGGTGGTGGATTGGGA+AGG | 0.615185 | 3.3:-70285641 | MS.gene75704:CDS |
| GGGATCAAGCTCAAGTTCTG+AGG | 0.620498 | 3.3:-70285667 | MS.gene75704:CDS |
| GGTCATTGCGATCTTTGATG+AGG | 0.621163 | 3.3:+70286431 | None:intergenic |
| GTTTAAGGTTCTGCTGAGAG+GGG | 0.633464 | 3.3:-70285687 | MS.gene75704:intron |
| AAGTACAACAATCTATAGTG+GGG | 0.642782 | 3.3:+70286497 | None:intergenic |
| AGTTCCTCCCCTATTTCCAG+CGG | 0.660557 | 3.3:-70285790 | MS.gene75704:intron |
| ATTACCGCTGGAAATAGGGG+AGG | 0.669828 | 3.3:+70285786 | None:intergenic |
| TCAAGTTCTGAGGAAAAGAG+TGG | 0.677014 | 3.3:-70285657 | MS.gene75704:CDS |
| AGTACAACAATCTATAGTGG+GGG | 0.691483 | 3.3:+70286498 | None:intergenic |
| AGTTCTGAGGAAAAGAGTGG+TGG | 0.693229 | 3.3:-70285654 | MS.gene75704:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATGAGAATTTTTTTTTGT+TGG | - | chr3.3:70286226-70286245 | MS.gene75704:intron | 15.0% |
| !! | AAAATTATAATAATTACCGC+TGG | + | chr3.3:70286444-70286463 | None:intergenic | 20.0% |
| !! | ATATAAATAAGGCTTAATCA+TGG | - | chr3.3:70286109-70286128 | MS.gene75704:intron | 20.0% |
| !!! | TAGTTTGCTTTATGTATTAA+GGG | - | chr3.3:70285934-70285953 | MS.gene75704:intron | 20.0% |
| !!! | TTAGTTTGCTTTATGTATTA+AGG | - | chr3.3:70285933-70285952 | MS.gene75704:intron | 20.0% |
| ! | AAGTGAGATATGAAAAGAAA+TGG | + | chr3.3:70286636-70286655 | None:intergenic | 25.0% |
| ! | ACACATTCAGTTATATTAGA+TGG | + | chr3.3:70285872-70285891 | None:intergenic | 25.0% |
| ! | AGAACCTTAAACATTATTAG+AGG | + | chr3.3:70286520-70286539 | None:intergenic | 25.0% |
| ! | ATAATCTTCAAAAGTAAGTG+AGG | - | chr3.3:70286140-70286159 | MS.gene75704:intron | 25.0% |
| ! | TCTAATATAACTGAATGTGT+AGG | - | chr3.3:70285872-70285891 | MS.gene75704:intron | 25.0% |
| !!! | CACTTACTTTTGAAGATTAT+TGG | + | chr3.3:70286140-70286159 | None:intergenic | 25.0% |
| !!! | GAGAATTTTTTTTTGTTGGT+CGG | - | chr3.3:70286230-70286249 | MS.gene75704:intron | 25.0% |
| !!! | TGCATTATTATTTCTACTGT+TGG | - | chr3.3:70285592-70285611 | MS.gene75704:CDS | 25.0% |
| AAGTACAACAATCTATAGTG+GGG | + | chr3.3:70285721-70285740 | None:intergenic | 30.0% | |
| AATAATTACCGCTGGAAATA+GGG | + | chr3.3:70286436-70286455 | None:intergenic | 30.0% | |
| ATTCAACTTGATACCAAGTT+TGG | + | chr3.3:70285810-70285829 | None:intergenic | 30.0% | |
| CATATGTATATAGTCCAATC+AGG | + | chr3.3:70285960-70285979 | None:intergenic | 30.0% | |
| GAAGTACAACAATCTATAGT+GGG | + | chr3.3:70285722-70285741 | None:intergenic | 30.0% | |
| TAATAATTACCGCTGGAAAT+AGG | + | chr3.3:70286437-70286456 | None:intergenic | 30.0% | |
| TGTGCCTCTAATAATGTTTA+AGG | - | chr3.3:70286513-70286532 | MS.gene75704:CDS | 30.0% | |
| TTCAACTTGATACCAAGTTT+GGG | + | chr3.3:70285809-70285828 | None:intergenic | 30.0% | |
| ! | CTTATCAAGGACTTGTTTAA+GGG | + | chr3.3:70285744-70285763 | None:intergenic | 30.0% |
| ! | TAATGCAGTTACACTTTTGT+TGG | + | chr3.3:70285579-70285598 | None:intergenic | 30.0% |
| ! | TCTTATCAAGGACTTGTTTA+AGG | + | chr3.3:70285745-70285764 | None:intergenic | 30.0% |
| !! | ACATTCCATTGAGTTGAATT+AGG | + | chr3.3:70286302-70286321 | None:intergenic | 30.0% |
| !! | ACTTTTGAAGATTATTGGAC+CGG | + | chr3.3:70286135-70286154 | None:intergenic | 30.0% |
| !! | TTATTATTTCTACTGTTGGC+TGG | - | chr3.3:70285596-70285615 | MS.gene75704:CDS | 30.0% |
| !!! | TGCATTTTTTGGTCTTATCA+AGG | + | chr3.3:70285757-70285776 | None:intergenic | 30.0% |
| AAATAAGGCTTAATCATGGC+CGG | - | chr3.3:70286113-70286132 | MS.gene75704:intron | 35.0% | |
| AATGTCTCATGTGACAAAAG+AGG | + | chr3.3:70286192-70286211 | None:intergenic | 35.0% | |
| AGTACAACAATCTATAGTGG+GGG | + | chr3.3:70285720-70285739 | None:intergenic | 35.0% | |
| ATAATTACCGCTGGAAATAG+GGG | + | chr3.3:70286435-70286454 | None:intergenic | 35.0% | |
| TCAACTTGATACCAAGTTTG+GGG | + | chr3.3:70285808-70285827 | None:intergenic | 35.0% | |
| TTATGTATTAAGGGCCTGAT+TGG | - | chr3.3:70285943-70285962 | MS.gene75704:intron | 35.0% | |
| ! | GGAAGTACAACAATCTATAG+TGG | + | chr3.3:70285723-70285742 | None:intergenic | 35.0% |
| !! | GATAAACTTGTTACTCTTGC+TGG | - | chr3.3:70285662-70285681 | MS.gene75704:CDS | 35.0% |
| !!! | GAGGATACAGATGCATTTTT+TGG | + | chr3.3:70285768-70285787 | None:intergenic | 35.0% |
| CTTCAAACACCTTAGCTTCA+GGG | + | chr3.3:70286379-70286398 | None:intergenic | 40.0% | |
| GGTGACAAATGTAGAAGATC+TGG | + | chr3.3:70286350-70286369 | None:intergenic | 40.0% | |
| TTCAAACACCTTAGCTTCAG+GGG | + | chr3.3:70286378-70286397 | None:intergenic | 40.0% | |
| ! | ACAATCTATAGTGGGGGTAT+TGG | + | chr3.3:70285714-70285733 | None:intergenic | 40.0% |
| ! | ATGTTTAAGGTTCTGCTGAG+AGG | - | chr3.3:70286526-70286545 | MS.gene75704:CDS | 40.0% |
| ! | TGTTTAAGGTTCTGCTGAGA+GGG | - | chr3.3:70286527-70286546 | MS.gene75704:CDS | 40.0% |
| !! | ATTGAGTTGAATTAGGCACG+GGG | + | chr3.3:70286295-70286314 | None:intergenic | 40.0% |
| !! | CATTGAGTTGAATTAGGCAC+GGG | + | chr3.3:70286296-70286315 | None:intergenic | 40.0% |
| !! | CCATTGAGTTGAATTAGGCA+CGG | + | chr3.3:70286297-70286316 | None:intergenic | 40.0% |
| !! | TAGTAGCTTTACTTTTGCGC+CGG | - | chr3.3:70286269-70286288 | MS.gene75704:intron | 40.0% |
| !! | TCAAGTTCTGAGGAAAAGAG+TGG | - | chr3.3:70286558-70286577 | MS.gene75704:CDS | 40.0% |
| ACCTAAATCCCCTGAAGCTA+AGG | - | chr3.3:70286367-70286386 | MS.gene75704:CDS | 45.0% | |
| ACCTTAGCTTCAGGGGATTT+AGG | + | chr3.3:70286371-70286390 | None:intergenic | 45.0% | |
| CCGTGCCTAATTCAACTCAA+TGG | - | chr3.3:70286294-70286313 | MS.gene75704:intron | 45.0% | |
| CCTTCAAACACCTTAGCTTC+AGG | + | chr3.3:70286380-70286399 | None:intergenic | 45.0% | |
| GATGGTATGTGACAAGCGTT+TGG | + | chr3.3:70285854-70285873 | None:intergenic | 45.0% | |
| GGTCATTGCGATCTTTGATG+AGG | + | chr3.3:70285787-70285806 | None:intergenic | 45.0% | |
| ! | AGGGGAGGAACTGTTTGTTT+TGG | + | chr3.3:70286417-70286436 | None:intergenic | 45.0% |
| ! | CCTGAAGCTAAGGTGTTTGA+AGG | - | chr3.3:70286377-70286396 | MS.gene75704:CDS | 45.0% |
| ! | GCTAAGGTGTTTGAAGGACT+TGG | - | chr3.3:70286383-70286402 | MS.gene75704:CDS | 45.0% |
| ! | GTTTAAGGTTCTGCTGAGAG+GGG | - | chr3.3:70286528-70286547 | MS.gene75704:CDS | 45.0% |
| !! | AGTTCTGAGGAAAAGAGTGG+TGG | - | chr3.3:70286561-70286580 | MS.gene75704:CDS | 45.0% |
| !! | GAAAAGAGTGGTGGTGGATT+GGG | - | chr3.3:70286570-70286589 | MS.gene75704:CDS | 45.0% |
| !! | GCTACTAAAGCCGTCGTTTT+TGG | + | chr3.3:70286256-70286275 | None:intergenic | 45.0% |
| !! | TTAAAATGTTTATATAAATA+AGG | - | chr3.3:70286098-70286117 | MS.gene75704:intron | 5.0% |
| AGTTCCTCCCCTATTTCCAG+CGG | - | chr3.3:70286425-70286444 | MS.gene75704:CDS | 50.0% | |
| ATTACCGCTGGAAATAGGGG+AGG | + | chr3.3:70286432-70286451 | None:intergenic | 50.0% | |
| GATCGCAATGACCCCAAACT+TGG | - | chr3.3:70285794-70285813 | MS.gene75704:CDS | 50.0% | |
| GCTGGTTGTCTTCCATACGT+TGG | - | chr3.3:70285680-70285699 | MS.gene75704:CDS | 50.0% | |
| GGGATCAAGCTCAAGTTCTG+AGG | - | chr3.3:70286548-70286567 | MS.gene75704:CDS | 50.0% | |
| GGTTGTCTTCCATACGTTGG+TGG | - | chr3.3:70285683-70285702 | MS.gene75704:CDS | 50.0% | |
| TCTGAGGAAAAGAGTGGTGG+TGG | - | chr3.3:70286564-70286583 | MS.gene75704:CDS | 50.0% | |
| TGGAAGCTGTACAGCAAGAG+TGG | + | chr3.3:70285834-70285853 | None:intergenic | 50.0% | |
| TGTTGGTCGGCCAAAAACGA+CGG | - | chr3.3:70286243-70286262 | MS.gene75704:intron | 50.0% | |
| TTGGCACTACCACCAACGTA+TGG | + | chr3.3:70285695-70285714 | None:intergenic | 50.0% | |
| !! | GGAAAAGAGTGGTGGTGGAT+TGG | - | chr3.3:70286569-70286588 | MS.gene75704:CDS | 50.0% |
| AGTTGAATTAGGCACGGGGC+CGG | + | chr3.3:70286291-70286310 | None:intergenic | 55.0% | |
| !! | AGAGTGGTGGTGGATTGGGA+AGG | - | chr3.3:70286574-70286593 | MS.gene75704:CDS | 55.0% |
| ATTGGGAAGGAGGTGGCTGG+TGG | - | chr3.3:70286587-70286606 | MS.gene75704:CDS | 60.0% | |
| ! | TGGATTGGGAAGGAGGTGGC+TGG | - | chr3.3:70286584-70286603 | MS.gene75704:CDS | 60.0% |
| !! | GTGGTGGATTGGGAAGGAGG+TGG | - | chr3.3:70286580-70286599 | MS.gene75704:CDS | 60.0% |
| !! | GTGGTGGTGGATTGGGAAGG+AGG | - | chr3.3:70286577-70286596 | MS.gene75704:CDS | 60.0% |
| AAGGAGGTGGCTGGTGGCAG+AGG | - | chr3.3:70286593-70286612 | MS.gene75704:CDS | 65.0% | |
| GAGGTGGCTGGTGGCAGAGG+TGG | - | chr3.3:70286596-70286615 | MS.gene75704:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 70285566 | 70286671 | 70285566 | ID=MS.gene75704 |
| chr3.3 | mRNA | 70285566 | 70286671 | 70285566 | ID=MS.gene75704.t1;Parent=MS.gene75704 |
| chr3.3 | exon | 70286350 | 70286671 | 70286350 | ID=MS.gene75704.t1.exon1;Parent=MS.gene75704.t1 |
| chr3.3 | CDS | 70286350 | 70286671 | 70286350 | ID=cds.MS.gene75704.t1;Parent=MS.gene75704.t1 |
| chr3.3 | exon | 70285791 | 70285886 | 70285791 | ID=MS.gene75704.t1.exon2;Parent=MS.gene75704.t1 |
| chr3.3 | CDS | 70285791 | 70285886 | 70285791 | ID=cds.MS.gene75704.t1;Parent=MS.gene75704.t1 |
| chr3.3 | exon | 70285566 | 70285702 | 70285566 | ID=MS.gene75704.t1.exon3;Parent=MS.gene75704.t1 |
| chr3.3 | CDS | 70285566 | 70285702 | 70285566 | ID=cds.MS.gene75704.t1;Parent=MS.gene75704.t1 |
| Gene Sequence |
| Protein sequence |
