Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76242.t1 | RHN82501.1 | 97.6 | 507 | 12 | 0 | 1 | 507 | 24 | 530 | 5.50E-253 | 883.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76242.t1 | Q93Y22 | 73.1 | 510 | 128 | 6 | 1 | 507 | 24 | 527 | 4.0e-191 | 669.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76242.t1 | A0A396K133 | 97.6 | 507 | 12 | 0 | 1 | 507 | 24 | 530 | 4.0e-253 | 883.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene21432 | MS.gene76242 | PPI |
| MS.gene76242 | MS.gene38302 | PPI |
| MS.gene76242 | MS.gene68223 | PPI |
| MS.gene76242 | MS.gene064893 | PPI |
| MS.gene76242 | MS.gene003223 | PPI |
| MS.gene76242 | MS.gene74608 | PPI |
| MS.gene76242 | MS.gene062888 | PPI |
| MS.gene76242 | MS.gene053143 | PPI |
| MS.gene014282 | MS.gene76242 | PPI |
| MS.gene76242 | MS.gene02789 | PPI |
| MS.gene76242 | MS.gene02023 | PPI |
| MS.gene76242 | MS.gene23325 | PPI |
| MS.gene76242 | MS.gene50735 | PPI |
| MS.gene76242 | MS.gene003673 | PPI |
| MS.gene76242 | MS.gene063166 | PPI |
| MS.gene76242 | MS.gene032230 | PPI |
| MS.gene76242 | MS.gene50077 | PPI |
| MS.gene76242 | MS.gene054585 | PPI |
| MS.gene76242 | MS.gene68093 | PPI |
| MS.gene76242 | MS.gene005784 | PPI |
| MS.gene003764 | MS.gene76242 | PPI |
| MS.gene76242 | MS.gene056700 | PPI |
| MS.gene76242 | MS.gene034150 | PPI |
| MS.gene76242 | MS.gene003672 | PPI |
| MS.gene76242 | MS.gene45686 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76242.t1 | MTR_2g101180 | 93.701 | 508 | 31 | 1 | 1 | 507 | 24 | 531 | 0.0 | 968 |
| MS.gene76242.t1 | MTR_1g111910 | 97.468 | 395 | 9 | 1 | 113 | 507 | 1 | 394 | 0.0 | 781 |
| MS.gene76242.t1 | MTR_1g111900 | 82.892 | 415 | 31 | 3 | 93 | 507 | 24 | 398 | 0.0 | 669 |
| MS.gene76242.t1 | MTR_1g111910 | 97.598 | 333 | 8 | 0 | 113 | 445 | 1 | 333 | 0.0 | 663 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76242.t1 | AT5G05010 | 72.353 | 510 | 132 | 6 | 1 | 507 | 24 | 527 | 0.0 | 731 |
| MS.gene76242.t1 | AT5G05010 | 72.353 | 510 | 132 | 6 | 1 | 507 | 24 | 527 | 0.0 | 731 |
Find 122 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTGTTCTCTGAGCAAATT+TGG | 0.170941 | 1.1:+79011340 | None:intergenic |
| CCAGATCCCATTGACGTTAA+AGG | 0.180295 | 1.1:+79014919 | None:intergenic |
| TCTAGCACTGGAACTGGTTT+TGG | 0.222551 | 1.1:-79014862 | MS.gene76242:CDS |
| CCAGTGGGGAAAGGCCTATT+TGG | 0.233180 | 1.1:+79012547 | None:intergenic |
| TGATTCTAGGAGTTCCATTT+TGG | 0.238396 | 1.1:-79011846 | MS.gene76242:CDS |
| TTTGGAAGTGGCTCTGGTTT+TGG | 0.245009 | 1.1:-79014844 | MS.gene76242:CDS |
| TTTGCCAATGAATATATATT+AGG | 0.250284 | 1.1:-79012580 | MS.gene76242:CDS |
| TCAAGGGAATAAGAATATTC+AGG | 0.278041 | 1.1:+79015271 | None:intergenic |
| AACTGTTGGCCCTCTTCTTC+TGG | 0.278840 | 1.1:-79012356 | MS.gene76242:CDS |
| AATAATTCTTTGTTCATGTT+AGG | 0.288497 | 1.1:+79012601 | None:intergenic |
| GGCTTTGCAGGTATGATTCT+AGG | 0.293482 | 1.1:-79011859 | MS.gene76242:intron |
| TGCTATAAAACGAACTGAAA+TGG | 0.309736 | 1.1:+79011638 | None:intergenic |
| GACCGAGACGGGCCAAGTTT+TGG | 0.330680 | 1.1:+79014422 | None:intergenic |
| AGAGGTGATAAAGGAGGATT+TGG | 0.353474 | 1.1:-79014943 | MS.gene76242:CDS |
| GAAAAGAATAGAGGTGATAA+AGG | 0.356831 | 1.1:-79014952 | MS.gene76242:CDS |
| GCTGCGTTTCCCAAGTTGAT+AGG | 0.373048 | 1.1:-79015819 | MS.gene76242:CDS |
| GGATGGACATGTTCAAGTTC+AGG | 0.374768 | 1.1:-79014267 | MS.gene76242:intron |
| CAGGACAGACCACTCCAAAA+TGG | 0.381459 | 1.1:+79011832 | None:intergenic |
| TATATTTGGCAGTGGGTCAT+TGG | 0.383072 | 1.1:-79011700 | MS.gene76242:intron |
| CAGGCCTAATATATATTCAT+TGG | 0.388730 | 1.1:+79012576 | None:intergenic |
| ATTTGGTCCTTTAACGTCAA+TGG | 0.388979 | 1.1:-79014926 | MS.gene76242:CDS |
| AAGGCCTATTTGGATCCTTC+AGG | 0.398496 | 1.1:+79012557 | None:intergenic |
| GAACAAACAGAGCAATATAA+TGG | 0.399824 | 1.1:-79015709 | MS.gene76242:CDS |
| TTATGTCAACATTGAATATG+AGG | 0.400025 | 1.1:-79012324 | MS.gene76242:CDS |
| TGTGTTCTCTGAGCAAATTT+GGG | 0.406798 | 1.1:+79011341 | None:intergenic |
| TAGGCCTGAAGGATCCAAAT+AGG | 0.408835 | 1.1:-79012561 | MS.gene76242:CDS |
| ACCTTTAGGCTTGGTAGAAA+AGG | 0.412806 | 1.1:+79014801 | None:intergenic |
| ATAATTCTTTGTTCATGTTA+GGG | 0.423733 | 1.1:+79012602 | None:intergenic |
| GCTATAAAACGAACTGAAAT+GGG | 0.427613 | 1.1:+79011639 | None:intergenic |
| ACCAACACCTCCGGCATCAC+TGG | 0.428704 | 1.1:+79012519 | None:intergenic |
| ACTGCTCCGCCAAAGGGCCT+TGG | 0.432532 | 1.1:-79014530 | MS.gene76242:CDS |
| ATCTGCAACTGCTCCGCCAA+AGG | 0.434706 | 1.1:-79014537 | MS.gene76242:CDS |
| TTTCCCAGTGCCTATCAACT+TGG | 0.434831 | 1.1:+79015809 | None:intergenic |
| TACAAACATCATTCCGCTAA+AGG | 0.437415 | 1.1:-79011375 | MS.gene76242:CDS |
| TTTGGTCCTTTAACGTCAAT+GGG | 0.442843 | 1.1:-79014925 | MS.gene76242:CDS |
| CCTTTAACGTCAATGGGATC+TGG | 0.448028 | 1.1:-79014919 | MS.gene76242:CDS |
| TTTCCCAAGTTGATAGGCAC+TGG | 0.449050 | 1.1:-79015813 | MS.gene76242:CDS |
| AGCTTCATACCAAGGCCCTT+TGG | 0.449669 | 1.1:+79014521 | None:intergenic |
| AGCATATCTAGCACTGGAAC+TGG | 0.451395 | 1.1:-79014868 | MS.gene76242:CDS |
| TCTGCAACTGCTCCGCCAAA+GGG | 0.453451 | 1.1:-79014536 | MS.gene76242:CDS |
| GAAGTTGATCAGCCAAAACT+TGG | 0.455464 | 1.1:-79014434 | MS.gene76242:CDS |
| AGCAAGTATAGAGCTTCTAT+TGG | 0.457428 | 1.1:+79015741 | None:intergenic |
| CCATCTGTTAGTCAGATTGA+TGG | 0.458530 | 1.1:-79012236 | MS.gene76242:CDS |
| TGCAGATACCCTCTTCATCA+AGG | 0.461980 | 1.1:+79015254 | None:intergenic |
| GCCAGTGATGCCGGAGGTGT+TGG | 0.465273 | 1.1:-79012520 | MS.gene76242:CDS |
| TCACAGAAAGAATACCAGTT+TGG | 0.470696 | 1.1:+79015659 | None:intergenic |
| TTTGATGAAGTCATCTCTCT+TGG | 0.470999 | 1.1:-79015205 | MS.gene76242:CDS |
| TCTGAGACTTCTCTCCAAAC+TGG | 0.475473 | 1.1:-79015673 | MS.gene76242:intron |
| GCAGGGCAGCTGACCGAGAC+GGG | 0.477348 | 1.1:+79014411 | None:intergenic |
| CATCTGTTAGTCAGATTGAT+GGG | 0.483758 | 1.1:-79012235 | MS.gene76242:CDS |
| TCCTCAACAGTTAAAGTGAT+GGG | 0.492997 | 1.1:+79014377 | None:intergenic |
| TCCCATCACTTTAACTGTTG+AGG | 0.495185 | 1.1:-79014378 | MS.gene76242:CDS |
| ACTGGTCAAGCCAGTGATGC+CGG | 0.497142 | 1.1:-79012529 | MS.gene76242:CDS |
| GGCATCACTGGCTTGACCAG+TGG | 0.499079 | 1.1:+79012531 | None:intergenic |
| TGATGGGATCAATAAGTGGC+AGG | 0.499617 | 1.1:+79014393 | None:intergenic |
| TTGGAATCATTGAAATCAGA+AGG | 0.499755 | 1.1:-79014470 | MS.gene76242:CDS |
| ACAAACATCATTCCGCTAAA+GGG | 0.504294 | 1.1:-79011374 | MS.gene76242:CDS |
| CAAGGGAATAAGAATATTCA+GGG | 0.504468 | 1.1:+79015272 | None:intergenic |
| AGCCAAAACTTGGCCCGTCT+CGG | 0.507527 | 1.1:-79014424 | MS.gene76242:CDS |
| GATGGAGCTTCTCGAAGAGC+TGG | 0.507775 | 1.1:+79012254 | None:intergenic |
| CCAAATAGGCCTTTCCCCAC+TGG | 0.514214 | 1.1:-79012547 | MS.gene76242:CDS |
| TTCATACCAAGGCCCTTTGG+CGG | 0.520278 | 1.1:+79014524 | None:intergenic |
| GAGCAAGGTCAATGAAACTA+AGG | 0.523675 | 1.1:-79015095 | MS.gene76242:CDS |
| TGAAAACCAACCTTTAGGCT+TGG | 0.523837 | 1.1:+79014792 | None:intergenic |
| AATGCTGATGCATCTGCTTG+TGG | 0.524015 | 1.1:+79011666 | None:intergenic |
| CAAATTCTTAACAAAGAGGA+TGG | 0.524295 | 1.1:-79014284 | MS.gene76242:CDS |
| CTCCTCAACAGTTAAAGTGA+TGG | 0.527724 | 1.1:+79014376 | None:intergenic |
| TTCTTATTCCCTTGATGAAG+AGG | 0.528102 | 1.1:-79015263 | MS.gene76242:CDS |
| TCTTCAAATTCTTAACAAAG+AGG | 0.528880 | 1.1:-79014288 | MS.gene76242:CDS |
| TGAAGAGAAGCTTTACAAGC+TGG | 0.531588 | 1.1:-79015125 | MS.gene76242:CDS |
| TTAGTCAGATTGATGGGGAA+TGG | 0.532121 | 1.1:-79012229 | MS.gene76242:CDS |
| AGCTTCTCGAAGAGCTGGAA+GGG | 0.533460 | 1.1:+79012259 | None:intergenic |
| TTCCCAGTGCCTATCAACTT+GGG | 0.533942 | 1.1:+79015810 | None:intergenic |
| GATTTGAATTATCAATCAGC+AGG | 0.540029 | 1.1:+79011813 | None:intergenic |
| GCATCACTGGCTTGACCAGT+GGG | 0.542106 | 1.1:+79012532 | None:intergenic |
| AAGGGCCTTGGTATGAAGCT+TGG | 0.542381 | 1.1:-79014518 | MS.gene76242:CDS |
| GGCGGATTACCACCCTTTAG+CGG | 0.543065 | 1.1:+79011362 | None:intergenic |
| TGAATATATATTAGGCCTGA+AGG | 0.544318 | 1.1:-79012572 | MS.gene76242:CDS |
| GTGCAGATTGAAAAGAATAG+AGG | 0.547686 | 1.1:-79014961 | MS.gene76242:intron |
| CCTTAAAAGACCAACACCTC+CGG | 0.547929 | 1.1:+79012510 | None:intergenic |
| AGTCATCTCTCTTGGTCACA+AGG | 0.548281 | 1.1:-79015197 | MS.gene76242:CDS |
| GTCAGATTGATGGGGAATGG+AGG | 0.550884 | 1.1:-79012226 | MS.gene76242:intron |
| TGTATAATGCAGTCAACTGT+TGG | 0.552237 | 1.1:-79012370 | MS.gene76242:intron |
| CTGGCTTGACCAGTGGGGAA+AGG | 0.553289 | 1.1:+79012538 | None:intergenic |
| ATGTGTCGGATAAGAATTGA+GGG | 0.553540 | 1.1:-79015849 | MS.gene76242:CDS |
| TCTTATTCCCTTGATGAAGA+GGG | 0.554642 | 1.1:-79015262 | MS.gene76242:CDS |
| GCAAAGCACTGATGAGTCAA+TGG | 0.567714 | 1.1:-79012479 | MS.gene76242:CDS |
| AAGAATAGAGGTGATAAAGG+AGG | 0.568426 | 1.1:-79014949 | MS.gene76242:CDS |
| GACAGTTTGTGGATATGTGT+CGG | 0.571597 | 1.1:-79015863 | None:intergenic |
| AGTTTCATTTCCAGAAGAAG+AGG | 0.572478 | 1.1:+79012346 | None:intergenic |
| GACATGAGCATATCTAGCAC+TGG | 0.574413 | 1.1:-79014874 | MS.gene76242:CDS |
| AGTTAAGCAATACTGTGAGA+TGG | 0.575944 | 1.1:-79015155 | MS.gene76242:CDS |
| TGATACATTTAGTGACCTGA+AGG | 0.576769 | 1.1:-79011613 | MS.gene76242:intron |
| TCAGAGAACACAGTTGATAA+CGG | 0.576840 | 1.1:-79011330 | MS.gene76242:CDS |
| TTTATTGACTTACTTGTCAG+TGG | 0.577188 | 1.1:+79012454 | None:intergenic |
| GGAGCAGTTGCAGATGCAGT+TGG | 0.578633 | 1.1:+79014545 | None:intergenic |
| GTTTCATTTCCAGAAGAAGA+GGG | 0.581990 | 1.1:+79012347 | None:intergenic |
| TTCCCAAGTTGATAGGCACT+GGG | 0.584126 | 1.1:-79015812 | MS.gene76242:CDS |
| CCATCAATCTGACTAACAGA+TGG | 0.584716 | 1.1:+79012236 | None:intergenic |
| ATCATTGAAATCAGAAGGTG+AGG | 0.586903 | 1.1:-79014465 | MS.gene76242:CDS |
| GGCAGGGCAGCTGACCGAGA+CGG | 0.587419 | 1.1:+79014410 | None:intergenic |
| AAAGTGATGGGATCAATAAG+TGG | 0.588460 | 1.1:+79014389 | None:intergenic |
| AAGTGAGATTGATAAGAGCA+AGG | 0.589518 | 1.1:-79015053 | MS.gene76242:intron |
| GCAGATACCCTCTTCATCAA+GGG | 0.590101 | 1.1:+79015255 | None:intergenic |
| TATGTGTCGGATAAGAATTG+AGG | 0.590875 | 1.1:-79015850 | MS.gene76242:CDS |
| GAGCTTCTCGAAGAGCTGGA+AGG | 0.593492 | 1.1:+79012258 | None:intergenic |
| TGATTGATAATTCAAATCGC+AGG | 0.596869 | 1.1:-79011808 | MS.gene76242:intron |
| CAAGCTGGTTCAGCAGAGCA+AGG | 0.602199 | 1.1:-79015110 | MS.gene76242:CDS |
| GCTTCTCGAAGAGCTGGAAG+GGG | 0.604509 | 1.1:+79012260 | None:intergenic |
| AAACGCAGAAATCAGCTCAA+AGG | 0.606139 | 1.1:+79015225 | None:intergenic |
| AACGTGACACTGAAAAGAGA+TGG | 0.621847 | 1.1:-79014347 | MS.gene76242:CDS |
| GATGGGATCAATAAGTGGCA+GGG | 0.627318 | 1.1:+79014394 | None:intergenic |
| GTTCTCTGAGCAAATTTGGG+CGG | 0.631459 | 1.1:+79011344 | None:intergenic |
| AACATCATTCCGCTAAAGGG+TGG | 0.633666 | 1.1:-79011371 | MS.gene76242:CDS |
| ATCTGTTAGTCAGATTGATG+GGG | 0.633879 | 1.1:-79012234 | MS.gene76242:CDS |
| GTATTGCTTAACTTGTGCAA+CGG | 0.634970 | 1.1:+79015165 | None:intergenic |
| AAACTAAGGATCTAATGAAG+CGG | 0.636182 | 1.1:-79015081 | MS.gene76242:CDS |
| ATTTACCAAGCTTCATACCA+AGG | 0.645763 | 1.1:+79014513 | None:intergenic |
| GTGACACTGAAAAGAGATGG+TGG | 0.652229 | 1.1:-79014344 | MS.gene76242:CDS |
| AGGGTGTGTCTTGAAAGAGA+CGG | 0.691041 | 1.1:+79012621 | None:intergenic |
| GGTCAAGCCAGTGATGCCGG+AGG | 0.696851 | 1.1:-79012526 | MS.gene76242:CDS |
| CATCACTGGCTTGACCAGTG+GGG | 0.736650 | 1.1:+79012533 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTATTTTATTACAAAAAAA+TGG | + | chr1.1:79014324-79014343 | None:intergenic | 10.0% |
| !!! | GTATTTTATTACAAAAAAAT+GGG | + | chr1.1:79014323-79014342 | None:intergenic | 10.0% |
| !!! | TATTTTATTACAAAAAAATG+GGG | + | chr1.1:79014322-79014341 | None:intergenic | 10.0% |
| !!! | TTTTTATGTTTTCTTTATTT+AGG | - | chr1.1:79013050-79013069 | MS.gene76242:intron | 10.0% |
| !! | AAAACATAAAAAAATTAAGC+AGG | + | chr1.1:79013042-79013061 | None:intergenic | 15.0% |
| !! | ACAACCATAATAAAATATTA+AGG | + | chr1.1:79015216-79015235 | None:intergenic | 15.0% |
| !! | TTTGTAATAAAATACTACTT+CGG | - | chr1.1:79014328-79014347 | MS.gene76242:CDS | 15.0% |
| !!! | AATTGAAAATAAATGGATTT+GGG | + | chr1.1:79011551-79011570 | None:intergenic | 15.0% |
| !!! | TAGTCCTTAATATTTTATTA+TGG | - | chr1.1:79015209-79015228 | MS.gene76242:CDS | 15.0% |
| !!! | TTTTAGTTCCTTAATAAAAT+TGG | - | chr1.1:79015279-79015298 | MS.gene76242:intron | 15.0% |
| !! | AATAATTCTTTGTTCATGTT+AGG | + | chr1.1:79014561-79014580 | None:intergenic | 20.0% |
| !! | ACCAATCAATTGAAAATAAA+TGG | + | chr1.1:79011558-79011577 | None:intergenic | 20.0% |
| !! | AGTTTGTAGATATAAATATC+AGG | - | chr1.1:79013477-79013496 | MS.gene76242:intron | 20.0% |
| !! | ATAATTCTTTGTTCATGTTA+GGG | + | chr1.1:79014560-79014579 | None:intergenic | 20.0% |
| !! | CAATTATGATCATTTAAACA+TGG | - | chr1.1:79011710-79011729 | MS.gene76242:intron | 20.0% |
| !! | TACATTAAACACTAAAAGAT+AGG | + | chr1.1:79013182-79013201 | None:intergenic | 20.0% |
| !! | TCAATAAATTTCATTGTTTC+TGG | - | chr1.1:79014720-79014739 | MS.gene76242:intron | 20.0% |
| !! | TTCATTCAAAACAAATTTCA+AGG | + | chr1.1:79014434-79014453 | None:intergenic | 20.0% |
| !! | TTGAATGAAAATATCTATTC+AGG | - | chr1.1:79014445-79014464 | MS.gene76242:CDS | 20.0% |
| !! | TTGTCTGATCTTAATATATT+TGG | - | chr1.1:79015445-79015464 | MS.gene76242:intron | 20.0% |
| !! | TTTGCCAATGAATATATATT+AGG | - | chr1.1:79014579-79014598 | MS.gene76242:intron | 20.0% |
| !!! | AGTTATATGTATTTTCATTC+TGG | + | chr1.1:79013824-79013843 | None:intergenic | 20.0% |
| !!! | CAATTGAAAATAAATGGATT+TGG | + | chr1.1:79011552-79011571 | None:intergenic | 20.0% |
| !!! | GCTTTTAATATGAATCATTT+TGG | - | chr1.1:79014197-79014216 | MS.gene76242:intron | 20.0% |
| !!! | GTTCATTACTCAATAATTTT+AGG | - | chr1.1:79011863-79011882 | MS.gene76242:intron | 20.0% |
| !!! | GTTTTAAAACTGATTCAAAA+AGG | + | chr1.1:79011805-79011824 | None:intergenic | 20.0% |
| !!! | TAATATGAATCATTTTGGAT+AGG | - | chr1.1:79014202-79014221 | MS.gene76242:intron | 20.0% |
| !!! | TCCATTTATTTTCAATTGAT+TGG | - | chr1.1:79011554-79011573 | MS.gene76242:intron | 20.0% |
| !!! | TTGACACAAGTTTAATTTAA+GGG | + | chr1.1:79011827-79011846 | None:intergenic | 20.0% |
| !!! | TTTGACACAAGTTTAATTTA+AGG | + | chr1.1:79011828-79011847 | None:intergenic | 20.0% |
| ! | AAACCTTCCTATAAAATTCA+AGG | + | chr1.1:79011745-79011764 | None:intergenic | 25.0% |
| ! | AATTAAATATGTCGACACAA+AGG | - | chr1.1:79013994-79014013 | MS.gene76242:intron | 25.0% |
| ! | ACACAAAATGTCAAATTTGA+AGG | + | chr1.1:79011527-79011546 | None:intergenic | 25.0% |
| ! | ACACAAAGGGAAAAATTAAA+AGG | - | chr1.1:79014008-79014027 | MS.gene76242:intron | 25.0% |
| ! | AGGGAAAATAAAAAGAGAAT+GGG | - | chr1.1:79014040-79014059 | MS.gene76242:intron | 25.0% |
| ! | ATCTTAATATATTTGGCAGT+GGG | - | chr1.1:79015452-79015471 | MS.gene76242:intron | 25.0% |
| ! | ATGAAAATACTTAGAATCAG+AGG | + | chr1.1:79013287-79013306 | None:intergenic | 25.0% |
| ! | ATTAAATATGTCGACACAAA+GGG | - | chr1.1:79013995-79014014 | MS.gene76242:intron | 25.0% |
| ! | ATTTCAATGATTCCAAAAAC+TGG | + | chr1.1:79012685-79012704 | None:intergenic | 25.0% |
| ! | CACAAAGGGAAAAATTAAAA+GGG | - | chr1.1:79014009-79014028 | MS.gene76242:intron | 25.0% |
| ! | CAGAAACATGTTAAATGAAA+AGG | + | chr1.1:79012540-79012559 | None:intergenic | 25.0% |
| ! | TAAATGAAAAGGTTACACTT+TGG | + | chr1.1:79012529-79012548 | None:intergenic | 25.0% |
| ! | TCTTCAAATTCTTAACAAAG+AGG | - | chr1.1:79012871-79012890 | MS.gene76242:intron | 25.0% |
| ! | TGAAAATACTTAGAATCAGA+GGG | + | chr1.1:79013286-79013305 | None:intergenic | 25.0% |
| ! | TTATCTGTGTATTTCAGTTT+GGG | - | chr1.1:79013316-79013335 | MS.gene76242:intron | 25.0% |
| ! | TTATGTCAACATTGAATATG+AGG | - | chr1.1:79014835-79014854 | MS.gene76242:CDS | 25.0% |
| ! | TTTATCTGTGTATTTCAGTT+TGG | - | chr1.1:79013315-79013334 | MS.gene76242:intron | 25.0% |
| !! | ATCATTTAAACATGGCTTTT+AGG | - | chr1.1:79011718-79011737 | MS.gene76242:intron | 25.0% |
| !! | TATTTTCTTGTGAGAGAATT+GGG | - | chr1.1:79014234-79014253 | MS.gene76242:intron | 25.0% |
| !! | TGAATTTTATAGGAAGGTTT+AGG | - | chr1.1:79011745-79011764 | MS.gene76242:intron | 25.0% |
| !! | TTTAGGTCCTTGAATTTTAT+AGG | - | chr1.1:79011735-79011754 | MS.gene76242:intron | 25.0% |
| !!! | ATGAAATGATTTTTAGTAGG+AGG | - | chr1.1:79011772-79011791 | MS.gene76242:intron | 25.0% |
| !!! | CTTAGTAATTTTGATGTTCA+AGG | - | chr1.1:79012839-79012858 | MS.gene76242:intron | 25.0% |
| !!! | GCATTGAACTAGATTTTTTT+TGG | - | chr1.1:79015660-79015679 | MS.gene76242:intron | 25.0% |
| !!! | TACAGTTGACTTAATGTTTT+TGG | - | chr1.1:79015746-79015765 | MS.gene76242:CDS | 25.0% |
| !!! | TATTGGTTTTGTCATTAACT+TGG | - | chr1.1:79011600-79011619 | MS.gene76242:intron | 25.0% |
| !!! | TGGATGAAATGATTTTTAGT+AGG | - | chr1.1:79011769-79011788 | MS.gene76242:intron | 25.0% |
| AAACTAAGGATCTAATGAAG+CGG | - | chr1.1:79012078-79012097 | MS.gene76242:intron | 30.0% | |
| AAAGGGAAAAATTAAAAGGG+AGG | - | chr1.1:79014012-79014031 | MS.gene76242:intron | 30.0% | |
| AACACAACTATATGATCTGA+TGG | + | chr1.1:79013926-79013945 | None:intergenic | 30.0% | |
| AAGAATTTAATGTGTAGACG+TGG | + | chr1.1:79015252-79015271 | None:intergenic | 30.0% | |
| ATAGTAAGCATGTATACTAG+AGG | - | chr1.1:79013396-79013415 | MS.gene76242:intron | 30.0% | |
| ATCTATGAAAACCAACCTTT+AGG | + | chr1.1:79012375-79012394 | None:intergenic | 30.0% | |
| ATTCATTCAATTAGCCAGAA+AGG | - | chr1.1:79014080-79014099 | MS.gene76242:intron | 30.0% | |
| ATTGGTCAATTCATCTTGTT+GGG | - | chr1.1:79011572-79011591 | MS.gene76242:intron | 30.0% | |
| CAAATTCTTAACAAAGAGGA+TGG | - | chr1.1:79012875-79012894 | MS.gene76242:intron | 30.0% | |
| CAAGGGAATAAGAATATTCA+GGG | + | chr1.1:79011890-79011909 | None:intergenic | 30.0% | |
| CAGGCCTAATATATATTCAT+TGG | + | chr1.1:79014586-79014605 | None:intergenic | 30.0% | |
| GAAAAGAATAGAGGTGATAA+AGG | - | chr1.1:79012207-79012226 | MS.gene76242:intron | 30.0% | |
| GAACAAACAGAGCAATATAA+TGG | - | chr1.1:79011450-79011469 | MS.gene76242:intron | 30.0% | |
| GAGGGAAAATAAAAAGAGAA+TGG | - | chr1.1:79014039-79014058 | MS.gene76242:intron | 30.0% | |
| GATCTTAATATATTTGGCAG+TGG | - | chr1.1:79015451-79015470 | MS.gene76242:intron | 30.0% | |
| GATTTGAATTATCAATCAGC+AGG | + | chr1.1:79015349-79015368 | None:intergenic | 30.0% | |
| GCTATAAAACGAACTGAAAT+GGG | + | chr1.1:79015523-79015542 | None:intergenic | 30.0% | |
| GGAAAATAAAAAGAGAATGG+GGG | - | chr1.1:79014042-79014061 | MS.gene76242:intron | 30.0% | |
| GGGAAAATAAAAAGAGAATG+GGG | - | chr1.1:79014041-79014060 | MS.gene76242:intron | 30.0% | |
| TAGTAAGCATGTATACTAGA+GGG | - | chr1.1:79013397-79013416 | MS.gene76242:intron | 30.0% | |
| TATCCTTCATTGTCAAAGAA+TGG | + | chr1.1:79014172-79014191 | None:intergenic | 30.0% | |
| TATTTCCAATACAAAACGAC+TGG | + | chr1.1:79015049-79015068 | None:intergenic | 30.0% | |
| TCAAAAGTCTAAGCTTCTTT+AGG | + | chr1.1:79013975-79013994 | None:intergenic | 30.0% | |
| TCAAGGGAATAAGAATATTC+AGG | + | chr1.1:79011891-79011910 | None:intergenic | 30.0% | |
| TCTTCCTTTGAATAAGTGTT+GGG | - | chr1.1:79014976-79014995 | MS.gene76242:intron | 30.0% | |
| TGAATATATATTAGGCCTGA+AGG | - | chr1.1:79014587-79014606 | MS.gene76242:intron | 30.0% | |
| TGCTATAAAACGAACTGAAA+TGG | + | chr1.1:79015524-79015543 | None:intergenic | 30.0% | |
| TTAAACACTAAAAGATAGGC+TGG | + | chr1.1:79013178-79013197 | None:intergenic | 30.0% | |
| TTAAATGTAACGACTCAGAA+TGG | - | chr1.1:79012420-79012439 | MS.gene76242:intron | 30.0% | |
| TTCATTCAAGTGTACAATGA+TGG | - | chr1.1:79015721-79015740 | MS.gene76242:CDS | 30.0% | |
| TTCTGAGTCGTTACATTTAA+AGG | + | chr1.1:79012420-79012439 | None:intergenic | 30.0% | |
| TTCTTCCTTTGAATAAGTGT+TGG | - | chr1.1:79014975-79014994 | MS.gene76242:intron | 30.0% | |
| TTGGAATCATTGAAATCAGA+AGG | - | chr1.1:79012689-79012708 | MS.gene76242:intron | 30.0% | |
| ! | AACTTTGACAAGAGTATATG+AGG | + | chr1.1:79013076-79013095 | None:intergenic | 30.0% |
| ! | ATTTTCTTGTGAGAGAATTG+GGG | - | chr1.1:79014235-79014254 | MS.gene76242:intron | 30.0% |
| ! | CTGCAAAGCCAATTTTATTA+AGG | + | chr1.1:79015290-79015309 | None:intergenic | 30.0% |
| ! | GTATTTTCTTGTGAGAGAAT+TGG | - | chr1.1:79014233-79014252 | MS.gene76242:intron | 30.0% |
| ! | GTTAACTTGAAGTTCTTGTA+GGG | - | chr1.1:79014130-79014149 | MS.gene76242:intron | 30.0% |
| ! | TCAAAAGACAAACCAGTTTT+TGG | - | chr1.1:79012670-79012689 | MS.gene76242:intron | 30.0% |
| ! | TGATTGATAATTCAAATCGC+AGG | - | chr1.1:79015351-79015370 | MS.gene76242:intron | 30.0% |
| ! | TTTTATAGGAAGGTTTAGGA+TGG | - | chr1.1:79011749-79011768 | MS.gene76242:intron | 30.0% |
| !! | ATAAACCAGTCGTTTTGTAT+TGG | - | chr1.1:79015041-79015060 | MS.gene76242:intron | 30.0% |
| !! | GTGCTTTTTATGAAATGATC+TGG | - | chr1.1:79015622-79015641 | MS.gene76242:intron | 30.0% |
| !! | TTTATTGACTTACTTGTCAG+TGG | + | chr1.1:79014708-79014727 | None:intergenic | 30.0% |
| !!! | GAACTAGATTTTTTTTGGCA+AGG | - | chr1.1:79015665-79015684 | MS.gene76242:intron | 30.0% |
| AAATAAAAAGAGAATGGGGG+TGG | - | chr1.1:79014045-79014064 | MS.gene76242:intron | 35.0% | |
| AAATCATCAGACAAACCTTC+AGG | + | chr1.1:79015564-79015583 | None:intergenic | 35.0% | |
| AAATTAAAAGGGAGGAAGAG+AGG | - | chr1.1:79014020-79014039 | MS.gene76242:intron | 35.0% | |
| AAGAATAGAGGTGATAAAGG+AGG | - | chr1.1:79012210-79012229 | MS.gene76242:intron | 35.0% | |
| AAGTGAGATTGATAAGAGCA+AGG | - | chr1.1:79012106-79012125 | MS.gene76242:intron | 35.0% | |
| AATATCAGGTAAGAGAGAGA+AGG | - | chr1.1:79013491-79013510 | MS.gene76242:intron | 35.0% | |
| AATCGCAGGTATGCTAAAAT+TGG | - | chr1.1:79015365-79015384 | MS.gene76242:intron | 35.0% | |
| AATCTGCAGAATCATAATCC+AGG | - | chr1.1:79014288-79014307 | MS.gene76242:CDS | 35.0% | |
| AATTAAAAGGGAGGAAGAGA+GGG | - | chr1.1:79014021-79014040 | MS.gene76242:intron | 35.0% | |
| ACAAACATCATTCCGCTAAA+GGG | - | chr1.1:79015785-79015804 | MS.gene76242:CDS | 35.0% | |
| AGATTGATAAGAGCAAGGTT+TGG | - | chr1.1:79012111-79012130 | MS.gene76242:intron | 35.0% | |
| AGCAAGTATAGAGCTTCTAT+TGG | + | chr1.1:79011421-79011440 | None:intergenic | 35.0% | |
| AGTTAAGCAATACTGTGAGA+TGG | - | chr1.1:79012004-79012023 | MS.gene76242:intron | 35.0% | |
| AGTTTCATTTCCAGAAGAAG+AGG | + | chr1.1:79014816-79014835 | None:intergenic | 35.0% | |
| ATATCAGGTAAGAGAGAGAA+GGG | - | chr1.1:79013492-79013511 | MS.gene76242:intron | 35.0% | |
| ATCATTGAAATCAGAAGGTG+AGG | - | chr1.1:79012694-79012713 | MS.gene76242:intron | 35.0% | |
| ATCTGCAGAATCATAATCCA+GGG | - | chr1.1:79014289-79014308 | MS.gene76242:CDS | 35.0% | |
| ATCTGTTAGTCAGATTGATG+GGG | - | chr1.1:79014925-79014944 | MS.gene76242:CDS | 35.0% | |
| ATGGTGATAAGAGAAAACAG+AGG | + | chr1.1:79013895-79013914 | None:intergenic | 35.0% | |
| ATGTGTCGGATAAGAATTGA+GGG | - | chr1.1:79011310-79011329 | MS.gene76242:CDS | 35.0% | |
| ATTTACCAAGCTTCATACCA+AGG | + | chr1.1:79012649-79012668 | None:intergenic | 35.0% | |
| ATTTGGTCCTTTAACGTCAA+TGG | - | chr1.1:79012233-79012252 | MS.gene76242:CDS | 35.0% | |
| CAGGTATGCTAAAATTGGAA+TGG | - | chr1.1:79015370-79015389 | MS.gene76242:intron | 35.0% | |
| CATCTGTTAGTCAGATTGAT+GGG | - | chr1.1:79014924-79014943 | MS.gene76242:CDS | 35.0% | |
| CATCTTGTTGGGAGAATTAT+TGG | - | chr1.1:79011583-79011602 | MS.gene76242:intron | 35.0% | |
| CTATCTGTTACTCGTGTAAA+TGG | - | chr1.1:79015072-79015091 | MS.gene76242:CDS | 35.0% | |
| CTTATCAAAAAAGACTGCTC+AGG | + | chr1.1:79012981-79013000 | None:intergenic | 35.0% | |
| GCAGTTGTCAGTAATATTGA+AGG | - | chr1.1:79013112-79013131 | MS.gene76242:intron | 35.0% | |
| GTGCAGATTGAAAAGAATAG+AGG | - | chr1.1:79012198-79012217 | MS.gene76242:intron | 35.0% | |
| GTTTCATTTCCAGAAGAAGA+GGG | + | chr1.1:79014815-79014834 | None:intergenic | 35.0% | |
| TAAACTCATGATCTTGTGAG+AGG | + | chr1.1:79015191-79015210 | None:intergenic | 35.0% | |
| TACAAACATCATTCCGCTAA+AGG | - | chr1.1:79015784-79015803 | MS.gene76242:CDS | 35.0% | |
| TCACAGAAAGAATACCAGTT+TGG | + | chr1.1:79011503-79011522 | None:intergenic | 35.0% | |
| TCCTCAACAGTTAAAGTGAT+GGG | + | chr1.1:79012785-79012804 | None:intergenic | 35.0% | |
| TCTTATTCCCTTGATGAAGA+GGG | - | chr1.1:79011897-79011916 | MS.gene76242:intron | 35.0% | |
| TGATACATTTAGTGACCTGA+AGG | - | chr1.1:79015546-79015565 | MS.gene76242:intron | 35.0% | |
| TGATCTGATGGTAGTTAGAA+TGG | + | chr1.1:79013914-79013933 | None:intergenic | 35.0% | |
| TGTATAATGCAGTCAACTGT+TGG | - | chr1.1:79014789-79014808 | MS.gene76242:intron | 35.0% | |
| TGTGTTCTCTGAGCAAATTT+GGG | + | chr1.1:79015821-79015840 | None:intergenic | 35.0% | |
| TTCTTATTCCCTTGATGAAG+AGG | - | chr1.1:79011896-79011915 | MS.gene76242:intron | 35.0% | |
| TTTGATGAAGTCATCTCTCT+TGG | - | chr1.1:79011954-79011973 | MS.gene76242:intron | 35.0% | |
| TTTGGTCCTTTAACGTCAAT+GGG | - | chr1.1:79012234-79012253 | MS.gene76242:CDS | 35.0% | |
| ! | AAAGTGATGGGATCAATAAG+TGG | + | chr1.1:79012773-79012792 | None:intergenic | 35.0% |
| ! | AGGCATTCTAGAAGAATTTG+TGG | + | chr1.1:79012400-79012419 | None:intergenic | 35.0% |
| ! | ATTAACTTGGTATGACTTGC+TGG | - | chr1.1:79011613-79011632 | MS.gene76242:intron | 35.0% |
| ! | CTTCCTTTGAATAAGTGTTG+GGG | - | chr1.1:79014977-79014996 | MS.gene76242:intron | 35.0% |
| ! | GATTGGTCAATTCATCTTGT+TGG | - | chr1.1:79011571-79011590 | MS.gene76242:intron | 35.0% |
| ! | GGCATTCTAGAAGAATTTGT+GGG | + | chr1.1:79012399-79012418 | None:intergenic | 35.0% |
| ! | GGTCCTTGAATTTTATAGGA+AGG | - | chr1.1:79011739-79011758 | MS.gene76242:intron | 35.0% |
| ! | GGTTAACTTGAAGTTCTTGT+AGG | - | chr1.1:79014129-79014148 | MS.gene76242:intron | 35.0% |
| ! | GTAGTTGTCTTCAGTTTTTG+TGG | - | chr1.1:79013238-79013257 | MS.gene76242:intron | 35.0% |
| ! | TGATTCTGCAGATTTTCAAC+TGG | + | chr1.1:79014282-79014301 | None:intergenic | 35.0% |
| ! | TGCCATATTGACGTTTTCAT+GGG | - | chr1.1:79011675-79011694 | MS.gene76242:CDS | 35.0% |
| ! | TGGCCTGAATCTAGATTTTT+GGG | - | chr1.1:79011633-79011652 | MS.gene76242:CDS | 35.0% |
| !! | GTATTGCTTAACTTGTGCAA+CGG | + | chr1.1:79011997-79012016 | None:intergenic | 35.0% |
| !! | TCAGAGAACACAGTTGATAA+CGG | - | chr1.1:79015829-79015848 | MS.gene76242:CDS | 35.0% |
| !! | TGATTCTAGGAGTTCCATTT+TGG | - | chr1.1:79015313-79015332 | MS.gene76242:intron | 35.0% |
| !!! | TGTTTTTGGCTTGTCTTTGT+AGG | - | chr1.1:79015760-79015779 | MS.gene76242:CDS | 35.0% |
| AAAAATGGGGAAAATCTCCC+TGG | + | chr1.1:79014309-79014328 | None:intergenic | 40.0% | |
| AAACGCAGAAATCAGCTCAA+AGG | + | chr1.1:79011937-79011956 | None:intergenic | 40.0% | |
| AACGTGACACTGAAAAGAGA+TGG | - | chr1.1:79012812-79012831 | MS.gene76242:intron | 40.0% | |
| AACTTGAAGTTCTTGTAGGG+TGG | - | chr1.1:79014133-79014152 | MS.gene76242:intron | 40.0% | |
| ACCCCATGAAAACGTCAATA+TGG | + | chr1.1:79011680-79011699 | None:intergenic | 40.0% | |
| ACTCTCCTATTCTCTTCCTT+AGG | - | chr1.1:79012587-79012606 | MS.gene76242:CDS | 40.0% | |
| ACTGACAACTGCATTTACAG+AGG | + | chr1.1:79013104-79013123 | None:intergenic | 40.0% | |
| AGAAGCAGTAATAGGGTAGT+TGG | - | chr1.1:79013424-79013443 | MS.gene76242:intron | 40.0% | |
| AGAGAAAACAGAGGAAAGTG+AGG | + | chr1.1:79013886-79013905 | None:intergenic | 40.0% | |
| AGAGGTGATAAAGGAGGATT+TGG | - | chr1.1:79012216-79012235 | MS.gene76242:intron | 40.0% | |
| AGGGAAGAAGAAGCAGTAAT+AGG | - | chr1.1:79013416-79013435 | MS.gene76242:intron | 40.0% | |
| AGTCTGAACCTGCAAAAACA+AGG | + | chr1.1:79014505-79014524 | None:intergenic | 40.0% | |
| ATCTCAAGAGTCAAGACTGA+AGG | + | chr1.1:79014389-79014408 | None:intergenic | 40.0% | |
| ATGCTTGTCCCCATCAAAAA+GGG | - | chr1.1:79012490-79012509 | MS.gene76242:CDS | 40.0% | |
| CAACGAAGCATGCAATATAC+AGG | - | chr1.1:79012443-79012462 | MS.gene76242:intron | 40.0% | |
| CATGAAAACGTCAATATGGC+AGG | + | chr1.1:79011676-79011695 | None:intergenic | 40.0% | |
| CCATCAATCTGACTAACAGA+TGG | + | chr1.1:79014926-79014945 | None:intergenic | 40.0% | |
| CCATCTGTTAGTCAGATTGA+TGG | - | chr1.1:79014923-79014942 | MS.gene76242:CDS | 40.0% | |
| CTCCTCAACAGTTAAAGTGA+TGG | + | chr1.1:79012786-79012805 | None:intergenic | 40.0% | |
| CTGTGTTCTCTGAGCAAATT+TGG | + | chr1.1:79015822-79015841 | None:intergenic | 40.0% | |
| GAGAAAACAGAGGAAAGTGA+GGG | + | chr1.1:79013885-79013904 | None:intergenic | 40.0% | |
| GAGCAAGGTCAATGAAACTA+AGG | - | chr1.1:79012064-79012083 | MS.gene76242:intron | 40.0% | |
| GGGAAGAAGAAGCAGTAATA+GGG | - | chr1.1:79013417-79013436 | MS.gene76242:intron | 40.0% | |
| GGTCCATTCTTTGACAATGA+AGG | - | chr1.1:79014166-79014185 | MS.gene76242:intron | 40.0% | |
| GTGGGATTGAGATAAACACA+AGG | + | chr1.1:79013342-79013361 | None:intergenic | 40.0% | |
| TATATTTGGCAGTGGGTCAT+TGG | - | chr1.1:79015459-79015478 | MS.gene76242:intron | 40.0% | |
| TATGCTTGTCCCCATCAAAA+AGG | - | chr1.1:79012489-79012508 | MS.gene76242:CDS | 40.0% | |
| TCCCATCACTTTAACTGTTG+AGG | - | chr1.1:79012781-79012800 | MS.gene76242:intron | 40.0% | |
| TGAAAACCAACCTTTAGGCT+TGG | + | chr1.1:79012370-79012389 | None:intergenic | 40.0% | |
| TGAAGAGAAGCTTTACAAGC+TGG | - | chr1.1:79012034-79012053 | MS.gene76242:intron | 40.0% | |
| TGTATGCTCACAAAGTCAGA+TGG | + | chr1.1:79015596-79015615 | None:intergenic | 40.0% | |
| TGTCCCCAACACTTATTCAA+AGG | + | chr1.1:79014983-79015002 | None:intergenic | 40.0% | |
| TGTGAAGAGAATTCATCCCT+TGG | - | chr1.1:79013556-79013575 | MS.gene76242:intron | 40.0% | |
| TTAGTCAGATTGATGGGGAA+TGG | - | chr1.1:79014930-79014949 | MS.gene76242:CDS | 40.0% | |
| TTCAAGGCATGAGTAAACCT+AGG | + | chr1.1:79014418-79014437 | None:intergenic | 40.0% | |
| TTTCTACCAAGCCTAAAGGT+TGG | - | chr1.1:79012361-79012380 | MS.gene76242:CDS | 40.0% | |
| ! | ACCTTTAGGCTTGGTAGAAA+AGG | + | chr1.1:79012361-79012380 | None:intergenic | 40.0% |
| ! | ATTATAGCTCTGCTTTGCCA+AGG | + | chr1.1:79013576-79013595 | None:intergenic | 40.0% |
| ! | CTGCCATATTGACGTTTTCA+TGG | - | chr1.1:79011674-79011693 | MS.gene76242:CDS | 40.0% |
| ! | CTGGCCTGAATCTAGATTTT+TGG | - | chr1.1:79011632-79011651 | MS.gene76242:CDS | 40.0% |
| ! | GAAGTTGATCAGCCAAAACT+TGG | - | chr1.1:79012725-79012744 | MS.gene76242:intron | 40.0% |
| ! | GCCATATTGACGTTTTCATG+GGG | - | chr1.1:79011676-79011695 | MS.gene76242:CDS | 40.0% |
| ! | TCCTTTTCTACCAAGCCTAA+AGG | - | chr1.1:79012357-79012376 | MS.gene76242:CDS | 40.0% |
| ! | TGATAAGAGCAAGGTTTGGT+TGG | - | chr1.1:79012115-79012134 | MS.gene76242:intron | 40.0% |
| ! | TTATAGCTCTGCTTTGCCAA+GGG | + | chr1.1:79013575-79013594 | None:intergenic | 40.0% |
| !! | ACGTTTTCATGGGGTTTTGA+TGG | - | chr1.1:79011685-79011704 | MS.gene76242:CDS | 40.0% |
| !! | CGTTTTCATGGGGTTTTGAT+GGG | - | chr1.1:79011686-79011705 | MS.gene76242:CDS | 40.0% |
| !! | CTAACAAGATGCTCTAGAGT+GGG | + | chr1.1:79013360-79013379 | None:intergenic | 40.0% |
| !! | GCTGAAGAGCATTATACTGA+TGG | - | chr1.1:79014108-79014127 | MS.gene76242:intron | 40.0% |
| !!! | ATATCGTGCCTTGTTTTTGC+AGG | - | chr1.1:79014494-79014513 | MS.gene76242:CDS | 40.0% |
| !!! | TTGTTTTTGCAGGTTCAGAC+TGG | - | chr1.1:79014504-79014523 | MS.gene76242:CDS | 40.0% |
| AACATCATTCCGCTAAAGGG+TGG | - | chr1.1:79015788-79015807 | MS.gene76242:CDS | 45.0% | |
| AAGGCCTATTTGGATCCTTC+AGG | + | chr1.1:79014605-79014624 | None:intergenic | 45.0% | |
| AATGCTGATGCATCTGCTTG+TGG | + | chr1.1:79015496-79015515 | None:intergenic | 45.0% | |
| ACTCATGATCTTGTGAGAGG+AGG | + | chr1.1:79015188-79015207 | None:intergenic | 45.0% | |
| ACTGCTCAGGTTATGCAAAG+CGG | + | chr1.1:79012968-79012987 | None:intergenic | 45.0% | |
| AGAATGGGGGTGGATAAAAG+TGG | - | chr1.1:79014055-79014074 | MS.gene76242:intron | 45.0% | |
| AGGGTGTGTCTTGAAAGAGA+CGG | + | chr1.1:79014541-79014560 | None:intergenic | 45.0% | |
| AGGTAAGAGAGAGAAGGGAA+AGG | - | chr1.1:79013497-79013516 | MS.gene76242:intron | 45.0% | |
| AGTCAAGACTGAAGGATGGT+AGG | + | chr1.1:79014381-79014400 | None:intergenic | 45.0% | |
| AGTCATCTCTCTTGGTCACA+AGG | - | chr1.1:79011962-79011981 | MS.gene76242:intron | 45.0% | |
| CAAGAGTCAAGACTGAAGGA+TGG | + | chr1.1:79014385-79014404 | None:intergenic | 45.0% | |
| CCAGATCCCATTGACGTTAA+AGG | + | chr1.1:79012243-79012262 | None:intergenic | 45.0% | |
| CCTTAAAAGACCAACACCTC+CGG | + | chr1.1:79014652-79014671 | None:intergenic | 45.0% | |
| CCTTTAACGTCAATGGGATC+TGG | - | chr1.1:79012240-79012259 | MS.gene76242:CDS | 45.0% | |
| GACATGAGCATATCTAGCAC+TGG | - | chr1.1:79012285-79012304 | MS.gene76242:CDS | 45.0% | |
| GACGACCTAAGGAAGAGAAT+AGG | + | chr1.1:79012595-79012614 | None:intergenic | 45.0% | |
| GATGGGATCAATAAGTGGCA+GGG | + | chr1.1:79012768-79012787 | None:intergenic | 45.0% | |
| GCAGATACCCTCTTCATCAA+GGG | + | chr1.1:79011907-79011926 | None:intergenic | 45.0% | |
| GGCAGGAAATTAAGACGACA+GGG | + | chr1.1:79011659-79011678 | None:intergenic | 45.0% | |
| GGGCCCAAAAATCTAGATTC+AGG | + | chr1.1:79011639-79011658 | None:intergenic | 45.0% | |
| GTGACACTGAAAAGAGATGG+TGG | - | chr1.1:79012815-79012834 | MS.gene76242:intron | 45.0% | |
| GTTCTCTGAGCAAATTTGGG+CGG | + | chr1.1:79015818-79015837 | None:intergenic | 45.0% | |
| TAGGCCTGAAGGATCCAAAT+AGG | - | chr1.1:79014598-79014617 | MS.gene76242:intron | 45.0% | |
| TATGCAAAGCGGCAGTCAAA+TGG | + | chr1.1:79012957-79012976 | None:intergenic | 45.0% | |
| TGATGGGATCAATAAGTGGC+AGG | + | chr1.1:79012769-79012788 | None:intergenic | 45.0% | |
| TGCAGATACCCTCTTCATCA+AGG | + | chr1.1:79011908-79011927 | None:intergenic | 45.0% | |
| TGCTTGTCCCCATCAAAAAG+GGG | - | chr1.1:79012491-79012510 | MS.gene76242:CDS | 45.0% | |
| TGGCAGGAAATTAAGACGAC+AGG | + | chr1.1:79011660-79011679 | None:intergenic | 45.0% | |
| TTCCCAGTGCCTATCAACTT+GGG | + | chr1.1:79011352-79011371 | None:intergenic | 45.0% | |
| TTGTAGGGTGGTATCAAAGC+TGG | - | chr1.1:79014145-79014164 | MS.gene76242:intron | 45.0% | |
| TTTCCCAGTGCCTATCAACT+TGG | + | chr1.1:79011353-79011372 | None:intergenic | 45.0% | |
| ! | AGCAATCTCCCCCTTTTTGA+TGG | + | chr1.1:79012503-79012522 | None:intergenic | 45.0% |
| ! | AGCATATCTAGCACTGGAAC+TGG | - | chr1.1:79012291-79012310 | MS.gene76242:CDS | 45.0% |
| ! | CAATCTCCCCCTTTTTGATG+GGG | + | chr1.1:79012501-79012520 | None:intergenic | 45.0% |
| ! | GCAATCTCCCCCTTTTTGAT+GGG | + | chr1.1:79012502-79012521 | None:intergenic | 45.0% |
| ! | GGATGGACATGTTCAAGTTC+AGG | - | chr1.1:79012892-79012911 | MS.gene76242:intron | 45.0% |
| ! | TCTGAGACTTCTCTCCAAAC+TGG | - | chr1.1:79011486-79011505 | MS.gene76242:intron | 45.0% |
| !! | CCACTCTAGAGCATCTTGTT+AGG | - | chr1.1:79013358-79013377 | MS.gene76242:intron | 45.0% |
| !! | CCTAACAAGATGCTCTAGAG+TGG | + | chr1.1:79013361-79013380 | None:intergenic | 45.0% |
| !! | CTAGGAGTTCCATTTTGGAG+TGG | - | chr1.1:79015318-79015337 | MS.gene76242:intron | 45.0% |
| !! | GCAAAGCACTGATGAGTCAA+TGG | - | chr1.1:79014680-79014699 | MS.gene76242:intron | 45.0% |
| !! | TCTAGCACTGGAACTGGTTT+TGG | - | chr1.1:79012297-79012316 | MS.gene76242:CDS | 45.0% |
| !! | TTCCCAAGTTGATAGGCACT+GGG | - | chr1.1:79011347-79011366 | MS.gene76242:CDS | 45.0% |
| !! | TTTCCCAAGTTGATAGGCAC+TGG | - | chr1.1:79011346-79011365 | MS.gene76242:CDS | 45.0% |
| !!! | ACTGGAACTGGTTTTGGAAG+TGG | - | chr1.1:79012303-79012322 | MS.gene76242:CDS | 45.0% |
| !!! | GAGGTGTTGGTCTTTTAAGG+TGG | - | chr1.1:79014652-79014671 | MS.gene76242:intron | 45.0% |
| !!! | TTTGGAAGTGGCTCTGGTTT+TGG | - | chr1.1:79012315-79012334 | MS.gene76242:CDS | 45.0% |
| AACTGTTGGCCCTCTTCTTC+TGG | - | chr1.1:79014803-79014822 | MS.gene76242:CDS | 50.0% | |
| AAGGGCCTTGGTATGAAGCT+TGG | - | chr1.1:79012641-79012660 | MS.gene76242:CDS | 50.0% | |
| ACTCTTGAGATTCCCAGCCT+AGG | - | chr1.1:79014398-79014417 | MS.gene76242:CDS | 50.0% | |
| AGATGCAGTTGGACGACCTA+AGG | + | chr1.1:79012606-79012625 | None:intergenic | 50.0% | |
| AGCTTCATACCAAGGCCCTT+TGG | + | chr1.1:79012641-79012660 | None:intergenic | 50.0% | |
| AGCTTCTCGAAGAGCTGGAA+GGG | + | chr1.1:79014903-79014922 | None:intergenic | 50.0% | |
| AGGAAAGTGAGGGAAAGTGG+AGG | + | chr1.1:79013875-79013894 | None:intergenic | 50.0% | |
| AGGCATGAGTAAACCTAGGC+TGG | + | chr1.1:79014414-79014433 | None:intergenic | 50.0% | |
| ATTGATGGGGAATGGAGGTG+TGG | - | chr1.1:79014938-79014957 | MS.gene76242:CDS | 50.0% | |
| CAGAGGAAAGTGAGGGAAAG+TGG | + | chr1.1:79013878-79013897 | None:intergenic | 50.0% | |
| CAGGACAGACCACTCCAAAA+TGG | + | chr1.1:79015330-79015349 | None:intergenic | 50.0% | |
| CATGATCTTGTGAGAGGAGG+AGG | + | chr1.1:79015185-79015204 | None:intergenic | 50.0% | |
| CTACTACTGCTAGCTGTGAC+GGG | + | chr1.1:79013674-79013693 | None:intergenic | 50.0% | |
| CTCTTCAGCTTCAGCCTTTC+TGG | + | chr1.1:79014097-79014116 | None:intergenic | 50.0% | |
| GCTACTACTGCTAGCTGTGA+CGG | + | chr1.1:79013675-79013694 | None:intergenic | 50.0% | |
| GCTTGTCCCCATCAAAAAGG+GGG | - | chr1.1:79012492-79012511 | MS.gene76242:CDS | 50.0% | |
| GGCATGAGTAAACCTAGGCT+GGG | + | chr1.1:79014413-79014432 | None:intergenic | 50.0% | |
| GTCAGATTGATGGGGAATGG+AGG | - | chr1.1:79014933-79014952 | MS.gene76242:CDS | 50.0% | |
| TGTGAGAGAATTGGGGCCAT+CGG | - | chr1.1:79014242-79014261 | MS.gene76242:intron | 50.0% | |
| TTCATACCAAGGCCCTTTGG+CGG | + | chr1.1:79012638-79012657 | None:intergenic | 50.0% | |
| !! | GCTGCGTTTCCCAAGTTGAT+AGG | - | chr1.1:79011340-79011359 | MS.gene76242:CDS | 50.0% |
| !!! | ACTGGTTTTGGAAGTGGCTC+TGG | - | chr1.1:79012309-79012328 | MS.gene76242:CDS | 50.0% |
| !!! | CCGGAGGTGTTGGTCTTTTA+AGG | - | chr1.1:79014649-79014668 | MS.gene76242:intron | 50.0% |
| ACTGGTCAAGCCAGTGATGC+CGG | - | chr1.1:79014630-79014649 | MS.gene76242:intron | 55.0% | |
| AGAGGAGGAGGAGTAGGAGA+AGG | + | chr1.1:79015173-79015192 | None:intergenic | 55.0% | |
| AGCCAAAACTTGGCCCGTCT+CGG | - | chr1.1:79012735-79012754 | MS.gene76242:intron | 55.0% | |
| AGGAGGAGGAGTAGGAGAAG+GGG | + | chr1.1:79015171-79015190 | None:intergenic | 55.0% | |
| ATCTGCAACTGCTCCGCCAA+AGG | - | chr1.1:79012622-79012641 | MS.gene76242:CDS | 55.0% | |
| CCAAATAGGCCTTTCCCCAC+TGG | - | chr1.1:79014612-79014631 | MS.gene76242:intron | 55.0% | |
| CCAGTGGGGAAAGGCCTATT+TGG | + | chr1.1:79014615-79014634 | None:intergenic | 55.0% | |
| CTTGTGAGAGGAGGAGGAGT+AGG | + | chr1.1:79015179-79015198 | None:intergenic | 55.0% | |
| GAGCTTCTCGAAGAGCTGGA+AGG | + | chr1.1:79014904-79014923 | None:intergenic | 55.0% | |
| GAGGAGGAGGAGTAGGAGAA+GGG | + | chr1.1:79015172-79015191 | None:intergenic | 55.0% | |
| GATGGAGCTTCTCGAAGAGC+TGG | + | chr1.1:79014908-79014927 | None:intergenic | 55.0% | |
| GCTTCTCGAAGAGCTGGAAG+GGG | + | chr1.1:79014902-79014921 | None:intergenic | 55.0% | |
| GGAGCAGTTGCAGATGCAGT+TGG | + | chr1.1:79012617-79012636 | None:intergenic | 55.0% | |
| GGCAGTCAAATGGACACGCA+TGG | + | chr1.1:79012947-79012966 | None:intergenic | 55.0% | |
| GTGAGAGAATTGGGGCCATC+GGG | - | chr1.1:79014243-79014262 | MS.gene76242:intron | 55.0% | |
| TCTGCAACTGCTCCGCCAAA+GGG | - | chr1.1:79012623-79012642 | MS.gene76242:CDS | 55.0% | |
| ! | CAAGCTGGTTCAGCAGAGCA+AGG | - | chr1.1:79012049-79012068 | MS.gene76242:intron | 55.0% |
| !! | CATCACTGGCTTGACCAGTG+GGG | + | chr1.1:79014629-79014648 | None:intergenic | 55.0% |
| !! | GCATCACTGGCTTGACCAGT+GGG | + | chr1.1:79014630-79014649 | None:intergenic | 55.0% |
| !! | GGCGGATTACCACCCTTTAG+CGG | + | chr1.1:79015800-79015819 | None:intergenic | 55.0% |
| AATTGGGGCCATCGGGAGGA+AGG | - | chr1.1:79014250-79014269 | MS.gene76242:intron | 60.0% | |
| ACCAACACCTCCGGCATCAC+TGG | + | chr1.1:79014643-79014662 | None:intergenic | 60.0% | |
| AGAGAATTGGGGCCATCGGG+AGG | - | chr1.1:79014246-79014265 | MS.gene76242:intron | 60.0% | |
| AGGAGGAGTAGGAGAAGGGG+AGG | + | chr1.1:79015168-79015187 | None:intergenic | 60.0% | |
| AGGAGTAGGAGAAGGGGAGG+GGG | + | chr1.1:79015165-79015184 | None:intergenic | 60.0% | |
| GAGGAGTAGGAGAAGGGGAG+GGG | + | chr1.1:79015166-79015185 | None:intergenic | 60.0% | |
| GGAGGAGTAGGAGAAGGGGA+GGG | + | chr1.1:79015167-79015186 | None:intergenic | 60.0% | |
| ! | CTGGCTTGACCAGTGGGGAA+AGG | + | chr1.1:79014624-79014643 | None:intergenic | 60.0% |
| ! | GACCGAGACGGGCCAAGTTT+TGG | + | chr1.1:79012740-79012759 | None:intergenic | 60.0% |
| !! | GGCATCACTGGCTTGACCAG+TGG | + | chr1.1:79014631-79014650 | None:intergenic | 60.0% |
| ACTGCTCCGCCAAAGGGCCT+TGG | - | chr1.1:79012629-79012648 | MS.gene76242:CDS | 65.0% | |
| GGTCAAGCCAGTGATGCCGG+AGG | - | chr1.1:79014633-79014652 | MS.gene76242:intron | 65.0% | |
| ! | GCCAGTGATGCCGGAGGTGT+TGG | - | chr1.1:79014639-79014658 | MS.gene76242:intron | 65.0% |
| GCAGGGCAGCTGACCGAGAC+GGG | + | chr1.1:79012751-79012770 | None:intergenic | 70.0% | |
| GGCAGGGCAGCTGACCGAGA+CGG | + | chr1.1:79012752-79012771 | None:intergenic | 70.0% | |
| GGCTGCGACCTTCCTCCCGA+TGG | + | chr1.1:79014261-79014280 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 79011310 | 79015871 | 79011310 | ID=MS.gene76242 |
| chr1.1 | mRNA | 79011310 | 79015871 | 79011310 | ID=MS.gene76242.t1;Parent=MS.gene76242 |
| chr1.1 | exon | 79015674 | 79015871 | 79015674 | ID=MS.gene76242.t1.exon1;Parent=MS.gene76242.t1 |
| chr1.1 | CDS | 79015674 | 79015871 | 79015674 | ID=cds.MS.gene76242.t1;Parent=MS.gene76242.t1 |
| chr1.1 | exon | 79015054 | 79015296 | 79015054 | ID=MS.gene76242.t1.exon2;Parent=MS.gene76242.t1 |
| chr1.1 | CDS | 79015054 | 79015296 | 79015054 | ID=cds.MS.gene76242.t1;Parent=MS.gene76242.t1 |
| chr1.1 | exon | 79014803 | 79014977 | 79014803 | ID=MS.gene76242.t1.exon3;Parent=MS.gene76242.t1 |
| chr1.1 | CDS | 79014803 | 79014977 | 79014803 | ID=cds.MS.gene76242.t1;Parent=MS.gene76242.t1 |
| chr1.1 | exon | 79014268 | 79014572 | 79014268 | ID=MS.gene76242.t1.exon4;Parent=MS.gene76242.t1 |
| chr1.1 | CDS | 79014268 | 79014572 | 79014268 | ID=cds.MS.gene76242.t1;Parent=MS.gene76242.t1 |
| chr1.1 | exon | 79012467 | 79012665 | 79012467 | ID=MS.gene76242.t1.exon5;Parent=MS.gene76242.t1 |
| chr1.1 | CDS | 79012467 | 79012665 | 79012467 | ID=cds.MS.gene76242.t1;Parent=MS.gene76242.t1 |
| chr1.1 | exon | 79012227 | 79012380 | 79012227 | ID=MS.gene76242.t1.exon6;Parent=MS.gene76242.t1 |
| chr1.1 | CDS | 79012227 | 79012380 | 79012227 | ID=cds.MS.gene76242.t1;Parent=MS.gene76242.t1 |
| chr1.1 | exon | 79011809 | 79011871 | 79011809 | ID=MS.gene76242.t1.exon7;Parent=MS.gene76242.t1 |
| chr1.1 | CDS | 79011809 | 79011871 | 79011809 | ID=cds.MS.gene76242.t1;Parent=MS.gene76242.t1 |
| chr1.1 | exon | 79011614 | 79011710 | 79011614 | ID=MS.gene76242.t1.exon8;Parent=MS.gene76242.t1 |
| chr1.1 | CDS | 79011614 | 79011710 | 79011614 | ID=cds.MS.gene76242.t1;Parent=MS.gene76242.t1 |
| chr1.1 | exon | 79011310 | 79011399 | 79011310 | ID=MS.gene76242.t1.exon9;Parent=MS.gene76242.t1 |
| chr1.1 | CDS | 79011310 | 79011399 | 79011310 | ID=cds.MS.gene76242.t1;Parent=MS.gene76242.t1 |
| Gene Sequence |
| Protein sequence |
