Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77713.t1 | XP_013455351.1 | 97 | 202 | 6 | 0 | 1 | 202 | 1 | 202 | 1.40E-103 | 385.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77713.t1 | Q38841 | 60.0 | 210 | 75 | 3 | 1 | 201 | 1 | 210 | 6.9e-62 | 238.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77713.t1 | A0A072UIB8 | 97.0 | 202 | 6 | 0 | 1 | 202 | 1 | 202 | 1.0e-103 | 385.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene77713.t1 | TF | MADS-MIKC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene05104 | MS.gene77713 | 0.810603 | 1.06E-50 | -1.69E-46 |
MS.gene051138 | MS.gene77713 | 0.800772 | 1.23E-48 | -1.69E-46 |
MS.gene051364 | MS.gene77713 | 0.812053 | 5.14E-51 | -1.69E-46 |
MS.gene052606 | MS.gene77713 | 0.820668 | 6.07E-53 | -1.69E-46 |
MS.gene053420 | MS.gene77713 | 0.807511 | 4.88E-50 | -1.69E-46 |
MS.gene055158 | MS.gene77713 | 0.801584 | 8.41E-49 | -1.69E-46 |
MS.gene055502 | MS.gene77713 | -0.800611 | 1.33E-48 | -1.69E-46 |
MS.gene056590 | MS.gene77713 | 0.812696 | 3.72E-51 | -1.69E-46 |
MS.gene056591 | MS.gene77713 | 0.81408 | 1.85E-51 | -1.69E-46 |
MS.gene056694 | MS.gene77713 | 0.806442 | 8.21E-50 | -1.69E-46 |
MS.gene056856 | MS.gene77713 | 0.817229 | 3.67E-52 | -1.69E-46 |
MS.gene057768 | MS.gene77713 | 0.823256 | 1.53E-53 | -1.69E-46 |
MS.gene058382 | MS.gene77713 | 0.831443 | 1.66E-55 | -1.69E-46 |
MS.gene058603 | MS.gene77713 | 0.805683 | 1.19E-49 | -1.69E-46 |
MS.gene059955 | MS.gene77713 | 0.800014 | 1.76E-48 | -1.69E-46 |
MS.gene061044 | MS.gene77713 | 0.800697 | 1.28E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77713.t1 | MTR_4g036050 | 97.030 | 202 | 6 | 0 | 1 | 202 | 1 | 202 | 5.88e-146 | 404 |
MS.gene77713.t1 | MTR_4g036050 | 90.099 | 202 | 6 | 1 | 1 | 202 | 1 | 188 | 2.93e-131 | 366 |
MS.gene77713.t1 | MTR_4g036050 | 90.099 | 202 | 6 | 1 | 1 | 202 | 1 | 188 | 8.68e-131 | 365 |
MS.gene77713.t1 | MTR_4g036050 | 83.168 | 202 | 6 | 1 | 1 | 202 | 1 | 174 | 9.38e-118 | 332 |
MS.gene77713.t1 | MTR_7g075870 | 47.337 | 169 | 88 | 1 | 1 | 169 | 1 | 168 | 6.34e-45 | 148 |
MS.gene77713.t1 | MTR_7g075870 | 47.337 | 169 | 87 | 2 | 1 | 169 | 1 | 167 | 3.50e-43 | 144 |
MS.gene77713.t1 | MTR_8g033220 | 43.860 | 171 | 95 | 1 | 1 | 171 | 1 | 170 | 1.08e-42 | 143 |
MS.gene77713.t1 | MTR_8g033220 | 43.860 | 171 | 95 | 1 | 1 | 171 | 1 | 170 | 1.48e-42 | 143 |
MS.gene77713.t1 | MTR_8g097090 | 44.886 | 176 | 95 | 2 | 1 | 175 | 1 | 175 | 4.88e-41 | 139 |
MS.gene77713.t1 | MTR_8g066260 | 42.614 | 176 | 86 | 2 | 1 | 169 | 1 | 168 | 8.94e-41 | 139 |
MS.gene77713.t1 | MTR_3g452380 | 40.201 | 199 | 109 | 5 | 1 | 192 | 16 | 211 | 1.58e-40 | 138 |
MS.gene77713.t1 | MTR_3g084980 | 43.529 | 170 | 94 | 2 | 1 | 169 | 1 | 169 | 1.96e-38 | 132 |
MS.gene77713.t1 | MTR_7g075850 | 46.471 | 170 | 88 | 2 | 1 | 169 | 1 | 168 | 3.05e-38 | 132 |
MS.gene77713.t1 | MTR_7g016600 | 43.860 | 171 | 90 | 2 | 1 | 169 | 1 | 167 | 3.07e-38 | 132 |
MS.gene77713.t1 | MTR_5g046790 | 39.785 | 186 | 97 | 3 | 1 | 179 | 1 | 178 | 1.80e-37 | 129 |
MS.gene77713.t1 | MTR_2g009890 | 43.750 | 176 | 93 | 3 | 1 | 173 | 1 | 173 | 5.32e-37 | 130 |
MS.gene77713.t1 | MTR_8g033270 | 44.509 | 173 | 88 | 3 | 1 | 170 | 1 | 168 | 6.67e-37 | 129 |
MS.gene77713.t1 | MTR_5g031000 | 40.099 | 202 | 110 | 4 | 1 | 198 | 1 | 195 | 6.68e-37 | 128 |
MS.gene77713.t1 | MTR_4g109830 | 40.698 | 172 | 95 | 2 | 1 | 169 | 1 | 168 | 7.93e-37 | 128 |
MS.gene77713.t1 | MTR_5g031000 | 41.451 | 193 | 105 | 3 | 1 | 189 | 1 | 189 | 1.23e-36 | 128 |
MS.gene77713.t1 | MTR_6g015975 | 43.275 | 171 | 91 | 2 | 1 | 169 | 1 | 167 | 2.38e-36 | 127 |
MS.gene77713.t1 | MTR_4g102530 | 43.750 | 176 | 83 | 5 | 1 | 169 | 1 | 167 | 5.56e-36 | 125 |
MS.gene77713.t1 | MTR_2g017865 | 40.341 | 176 | 101 | 3 | 1 | 175 | 16 | 188 | 4.65e-35 | 124 |
MS.gene77713.t1 | MTR_1g038300 | 36.946 | 203 | 121 | 3 | 1 | 196 | 1 | 203 | 4.80e-35 | 124 |
MS.gene77713.t1 | MTR_4g109810 | 41.618 | 173 | 90 | 2 | 1 | 169 | 1 | 166 | 8.50e-35 | 123 |
MS.gene77713.t1 | MTR_3g005530 | 40.237 | 169 | 93 | 3 | 1 | 166 | 1 | 164 | 1.18e-34 | 122 |
MS.gene77713.t1 | MTR_8g087860 | 38.122 | 181 | 110 | 2 | 1 | 181 | 17 | 195 | 6.01e-34 | 121 |
MS.gene77713.t1 | MTR_7g016630 | 38.462 | 169 | 101 | 1 | 1 | 169 | 1 | 166 | 4.56e-33 | 119 |
MS.gene77713.t1 | MTR_6g464720 | 38.462 | 182 | 100 | 3 | 1 | 176 | 1 | 176 | 4.19e-32 | 116 |
MS.gene77713.t1 | MTR_5g066180 | 40.936 | 171 | 93 | 4 | 1 | 169 | 1 | 165 | 6.05e-30 | 110 |
MS.gene77713.t1 | MTR_3g088615 | 38.514 | 148 | 84 | 2 | 1 | 147 | 1 | 142 | 8.93e-29 | 106 |
MS.gene77713.t1 | MTR_1g053070 | 36.082 | 194 | 110 | 5 | 1 | 185 | 1 | 189 | 1.16e-28 | 107 |
MS.gene77713.t1 | MTR_5g046870 | 50.980 | 102 | 44 | 2 | 1 | 96 | 1 | 102 | 7.41e-28 | 102 |
MS.gene77713.t1 | MTR_1g101970 | 37.278 | 169 | 105 | 1 | 1 | 169 | 1 | 168 | 9.05e-28 | 103 |
MS.gene77713.t1 | MTR_5g032520 | 40.351 | 171 | 96 | 3 | 1 | 169 | 1 | 167 | 1.80e-27 | 103 |
MS.gene77713.t1 | MTR_4g093970 | 36.207 | 174 | 109 | 2 | 1 | 173 | 27 | 199 | 8.46e-27 | 102 |
MS.gene77713.t1 | MTR_5g032150 | 39.766 | 171 | 97 | 3 | 1 | 169 | 1 | 167 | 2.97e-26 | 100 |
MS.gene77713.t1 | MTR_0003s0590 | 38.372 | 172 | 100 | 4 | 1 | 169 | 1 | 169 | 5.13e-26 | 100 |
MS.gene77713.t1 | MTR_3g113030 | 35.057 | 174 | 105 | 4 | 1 | 172 | 1 | 168 | 6.86e-26 | 100 |
MS.gene77713.t1 | MTR_1g029670 | 37.162 | 148 | 86 | 2 | 1 | 147 | 1 | 142 | 9.10e-25 | 95.9 |
MS.gene77713.t1 | MTR_5g021270 | 33.529 | 170 | 104 | 4 | 1 | 166 | 1 | 165 | 5.04e-23 | 92.8 |
MS.gene77713.t1 | MTR_5g021270 | 33.529 | 170 | 104 | 4 | 1 | 166 | 1 | 165 | 5.32e-23 | 92.4 |
MS.gene77713.t1 | MTR_2g461710 | 66.102 | 59 | 20 | 0 | 1 | 59 | 1 | 59 | 5.41e-23 | 87.8 |
MS.gene77713.t1 | MTR_5g066960 | 66.102 | 59 | 20 | 0 | 1 | 59 | 1 | 59 | 3.65e-22 | 85.5 |
MS.gene77713.t1 | MTR_4g093030 | 50.575 | 87 | 28 | 1 | 1 | 72 | 1 | 87 | 3.38e-21 | 85.9 |
MS.gene77713.t1 | MTR_1g041615 | 42.268 | 97 | 53 | 1 | 16 | 109 | 20 | 116 | 1.56e-17 | 75.9 |
MS.gene77713.t1 | MTR_3g102570 | 46.575 | 73 | 39 | 0 | 1 | 73 | 1 | 73 | 3.15e-17 | 78.6 |
MS.gene77713.t1 | MTR_4g084740 | 42.169 | 83 | 48 | 0 | 1 | 83 | 1 | 83 | 3.99e-17 | 78.6 |
MS.gene77713.t1 | MTR_2g093190 | 28.421 | 190 | 103 | 5 | 2 | 170 | 9 | 186 | 9.83e-16 | 73.2 |
MS.gene77713.t1 | MTR_8g051580 | 56.364 | 55 | 24 | 0 | 1 | 55 | 1 | 55 | 7.42e-15 | 69.7 |
MS.gene77713.t1 | MTR_8g079502 | 41.667 | 84 | 46 | 2 | 1 | 84 | 1 | 81 | 1.85e-14 | 68.9 |
MS.gene77713.t1 | MTR_1g063160 | 43.836 | 73 | 40 | 1 | 1 | 73 | 1 | 72 | 6.09e-14 | 67.4 |
MS.gene77713.t1 | MTR_1g047550 | 44.444 | 72 | 39 | 1 | 1 | 72 | 1 | 71 | 1.12e-13 | 66.6 |
MS.gene77713.t1 | MTR_1g054265 | 43.836 | 73 | 40 | 1 | 1 | 73 | 1 | 72 | 2.64e-13 | 65.5 |
MS.gene77713.t1 | MTR_4g131030 | 44.444 | 72 | 39 | 1 | 1 | 72 | 1 | 71 | 2.83e-13 | 66.2 |
MS.gene77713.t1 | MTR_3g030770 | 30.811 | 185 | 105 | 7 | 2 | 170 | 9 | 186 | 3.15e-13 | 66.2 |
MS.gene77713.t1 | MTR_1g108510 | 30.811 | 185 | 105 | 7 | 2 | 170 | 9 | 186 | 3.15e-13 | 66.2 |
MS.gene77713.t1 | MTR_4g094638 | 33.019 | 106 | 68 | 2 | 1 | 106 | 1 | 103 | 5.16e-13 | 64.7 |
MS.gene77713.t1 | MTR_2g105290 | 31.818 | 110 | 74 | 1 | 1 | 110 | 11 | 119 | 5.99e-13 | 64.7 |
MS.gene77713.t1 | MTR_4g094632 | 33.333 | 111 | 71 | 3 | 1 | 109 | 1 | 110 | 6.94e-13 | 63.9 |
MS.gene77713.t1 | MTR_2g030740 | 26.984 | 189 | 115 | 6 | 2 | 170 | 9 | 194 | 1.52e-12 | 64.7 |
MS.gene77713.t1 | MTR_1g108580 | 29.189 | 185 | 108 | 7 | 2 | 170 | 9 | 186 | 2.65e-12 | 63.9 |
MS.gene77713.t1 | MTR_4g108720 | 41.333 | 75 | 43 | 1 | 1 | 74 | 1 | 75 | 3.39e-12 | 64.7 |
MS.gene77713.t1 | MTR_8g086290 | 38.356 | 73 | 44 | 1 | 2 | 74 | 12 | 83 | 3.71e-12 | 62.4 |
MS.gene77713.t1 | MTR_5g045560 | 36.905 | 84 | 51 | 2 | 1 | 84 | 8 | 89 | 4.31e-12 | 63.2 |
MS.gene77713.t1 | MTR_3g052920 | 40.000 | 70 | 41 | 1 | 2 | 71 | 9 | 77 | 4.42e-12 | 63.2 |
MS.gene77713.t1 | MTR_1g106070 | 40.000 | 70 | 41 | 1 | 2 | 71 | 9 | 77 | 4.74e-12 | 62.4 |
MS.gene77713.t1 | MTR_1g105910 | 40.000 | 70 | 41 | 1 | 2 | 71 | 9 | 77 | 8.08e-12 | 62.4 |
MS.gene77713.t1 | MTR_3g080940 | 34.694 | 98 | 58 | 3 | 1 | 98 | 8 | 99 | 1.15e-11 | 61.6 |
MS.gene77713.t1 | MTR_8g043650 | 40.000 | 70 | 41 | 1 | 2 | 71 | 9 | 77 | 1.22e-11 | 62.0 |
MS.gene77713.t1 | MTR_2g085250 | 41.429 | 70 | 40 | 1 | 2 | 71 | 9 | 77 | 1.34e-11 | 62.0 |
MS.gene77713.t1 | MTR_2g085280 | 41.429 | 70 | 40 | 1 | 2 | 71 | 9 | 77 | 1.36e-11 | 62.0 |
MS.gene77713.t1 | MTR_8g046350 | 40.278 | 72 | 42 | 1 | 1 | 72 | 1 | 71 | 1.48e-11 | 60.5 |
MS.gene77713.t1 | MTR_3g052870 | 40.000 | 70 | 41 | 1 | 2 | 71 | 9 | 77 | 1.82e-11 | 61.2 |
MS.gene77713.t1 | MTR_1g077360 | 40.000 | 70 | 41 | 1 | 2 | 71 | 9 | 77 | 1.96e-11 | 61.6 |
MS.gene77713.t1 | MTR_1g105920 | 40.000 | 70 | 41 | 1 | 2 | 71 | 9 | 77 | 2.47e-11 | 61.2 |
MS.gene77713.t1 | MTR_7g028448 | 29.545 | 132 | 89 | 3 | 16 | 147 | 26 | 153 | 2.58e-11 | 60.1 |
MS.gene77713.t1 | MTR_4g036915 | 29.545 | 132 | 89 | 3 | 16 | 147 | 26 | 153 | 2.58e-11 | 60.1 |
MS.gene77713.t1 | MTR_1g012570 | 40.000 | 70 | 41 | 1 | 2 | 71 | 9 | 77 | 2.78e-11 | 61.2 |
MS.gene77713.t1 | MTR_5g041650 | 42.105 | 76 | 41 | 2 | 1 | 74 | 38 | 112 | 3.76e-11 | 61.6 |
MS.gene77713.t1 | MTR_8g033250 | 29.167 | 144 | 92 | 2 | 67 | 200 | 8 | 151 | 6.74e-11 | 58.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77713.t1 | AT1G71692 | 59.716 | 211 | 76 | 3 | 1 | 202 | 1 | 211 | 1.04e-77 | 232 |
MS.gene77713.t1 | AT2G45660 | 44.828 | 174 | 88 | 4 | 1 | 171 | 1 | 169 | 4.15e-41 | 139 |
MS.gene77713.t1 | AT3G58780 | 43.750 | 176 | 95 | 3 | 1 | 175 | 16 | 188 | 1.33e-40 | 138 |
MS.gene77713.t1 | AT2G42830 | 43.258 | 178 | 97 | 3 | 1 | 177 | 16 | 190 | 1.69e-40 | 138 |
MS.gene77713.t1 | AT3G58780 | 43.750 | 176 | 95 | 3 | 1 | 175 | 22 | 194 | 1.75e-40 | 138 |
MS.gene77713.t1 | AT1G24260 | 43.605 | 172 | 94 | 2 | 1 | 170 | 1 | 171 | 1.08e-39 | 136 |
MS.gene77713.t1 | AT1G69120 | 39.665 | 179 | 107 | 1 | 1 | 179 | 1 | 178 | 1.29e-39 | 135 |
MS.gene77713.t1 | AT1G24260 | 43.605 | 172 | 95 | 1 | 1 | 170 | 1 | 172 | 1.57e-39 | 135 |
MS.gene77713.t1 | AT2G42830 | 43.889 | 180 | 95 | 4 | 1 | 177 | 16 | 192 | 2.76e-39 | 135 |
MS.gene77713.t1 | AT1G69120 | 39.665 | 179 | 107 | 1 | 1 | 179 | 1 | 178 | 3.08e-39 | 135 |
MS.gene77713.t1 | AT2G45660 | 45.342 | 161 | 80 | 4 | 1 | 158 | 1 | 156 | 4.25e-39 | 132 |
MS.gene77713.t1 | AT4G09960 | 42.045 | 176 | 98 | 3 | 1 | 175 | 1 | 173 | 2.29e-38 | 132 |
MS.gene77713.t1 | AT4G09960 | 42.045 | 176 | 98 | 3 | 1 | 175 | 2 | 174 | 2.62e-38 | 132 |
MS.gene77713.t1 | AT4G09960 | 42.045 | 176 | 98 | 3 | 1 | 175 | 11 | 183 | 3.31e-38 | 132 |
MS.gene77713.t1 | AT4G09960 | 42.045 | 176 | 98 | 3 | 1 | 175 | 27 | 199 | 7.15e-38 | 132 |
MS.gene77713.t1 | AT5G60910 | 40.698 | 172 | 95 | 2 | 1 | 169 | 1 | 168 | 1.50e-37 | 130 |
MS.gene77713.t1 | AT1G24260 | 43.750 | 160 | 88 | 1 | 1 | 158 | 1 | 160 | 1.99e-37 | 130 |
MS.gene77713.t1 | AT2G45650 | 43.931 | 173 | 86 | 3 | 1 | 169 | 1 | 166 | 2.00e-37 | 130 |
MS.gene77713.t1 | AT1G26310 | 37.158 | 183 | 108 | 2 | 1 | 179 | 1 | 180 | 2.32e-37 | 130 |
MS.gene77713.t1 | AT3G58780 | 42.045 | 176 | 91 | 3 | 1 | 175 | 16 | 181 | 6.31e-37 | 129 |
MS.gene77713.t1 | AT4G18960 | 40.909 | 176 | 100 | 3 | 2 | 176 | 18 | 190 | 8.41e-37 | 129 |
MS.gene77713.t1 | AT4G09960 | 40.805 | 174 | 99 | 3 | 1 | 173 | 1 | 171 | 1.95e-36 | 127 |
MS.gene77713.t1 | AT3G58780 | 38.500 | 200 | 96 | 3 | 1 | 175 | 16 | 213 | 1.99e-36 | 128 |
MS.gene77713.t1 | AT4G37940 | 40.964 | 166 | 95 | 3 | 1 | 166 | 1 | 163 | 2.90e-36 | 127 |
MS.gene77713.t1 | AT3G58780 | 47.260 | 146 | 73 | 3 | 1 | 145 | 16 | 158 | 4.13e-36 | 128 |
MS.gene77713.t1 | AT2G03710 | 43.529 | 170 | 93 | 3 | 1 | 169 | 1 | 168 | 2.80e-35 | 123 |
MS.gene77713.t1 | AT4G22950 | 40.571 | 175 | 97 | 3 | 1 | 173 | 1 | 170 | 4.10e-35 | 122 |
MS.gene77713.t1 | AT3G02310 | 43.195 | 169 | 95 | 1 | 1 | 169 | 1 | 168 | 4.34e-35 | 123 |
MS.gene77713.t1 | AT5G15800 | 43.195 | 169 | 95 | 1 | 1 | 169 | 1 | 168 | 4.37e-35 | 124 |
MS.gene77713.t1 | AT5G15800 | 43.195 | 169 | 95 | 1 | 1 | 169 | 1 | 168 | 5.94e-35 | 124 |
MS.gene77713.t1 | AT4G09960 | 41.111 | 180 | 98 | 4 | 1 | 175 | 96 | 272 | 1.65e-34 | 125 |
MS.gene77713.t1 | AT2G03710 | 43.529 | 170 | 93 | 3 | 1 | 169 | 1 | 168 | 1.66e-34 | 123 |
MS.gene77713.t1 | AT2G03710 | 43.529 | 170 | 93 | 3 | 1 | 169 | 1 | 168 | 1.78e-34 | 123 |
MS.gene77713.t1 | AT4G37940 | 42.384 | 151 | 84 | 3 | 1 | 151 | 1 | 148 | 1.91e-34 | 122 |
MS.gene77713.t1 | AT5G62165 | 38.824 | 170 | 102 | 2 | 1 | 170 | 1 | 168 | 2.73e-34 | 121 |
MS.gene77713.t1 | AT5G62165 | 38.824 | 170 | 102 | 2 | 1 | 170 | 1 | 168 | 2.73e-34 | 121 |
MS.gene77713.t1 | AT5G62165 | 38.824 | 170 | 102 | 2 | 1 | 170 | 1 | 168 | 2.73e-34 | 121 |
MS.gene77713.t1 | AT3G57230 | 40.854 | 164 | 89 | 4 | 1 | 162 | 1 | 158 | 2.76e-34 | 122 |
MS.gene77713.t1 | AT3G57230 | 40.854 | 164 | 89 | 4 | 1 | 162 | 1 | 158 | 2.76e-34 | 122 |
MS.gene77713.t1 | AT3G02310 | 43.195 | 169 | 95 | 1 | 1 | 169 | 1 | 168 | 3.22e-34 | 122 |
MS.gene77713.t1 | AT4G11880 | 40.625 | 160 | 89 | 2 | 1 | 158 | 1 | 156 | 3.96e-34 | 120 |
MS.gene77713.t1 | AT4G11880 | 40.625 | 160 | 89 | 2 | 1 | 158 | 1 | 156 | 3.96e-34 | 120 |
MS.gene77713.t1 | AT4G22950 | 40.110 | 182 | 102 | 3 | 1 | 180 | 1 | 177 | 5.77e-34 | 120 |
MS.gene77713.t1 | AT4G22950 | 40.110 | 182 | 102 | 3 | 1 | 180 | 1 | 177 | 5.77e-34 | 120 |
MS.gene77713.t1 | AT5G13790 | 37.681 | 207 | 114 | 5 | 1 | 198 | 1 | 201 | 8.79e-34 | 121 |
MS.gene77713.t1 | AT5G62165 | 38.608 | 158 | 95 | 2 | 1 | 158 | 1 | 156 | 8.59e-33 | 115 |
MS.gene77713.t1 | AT5G62165 | 38.608 | 158 | 95 | 2 | 1 | 158 | 1 | 156 | 8.59e-33 | 115 |
MS.gene77713.t1 | AT5G62165 | 38.608 | 158 | 95 | 2 | 1 | 158 | 1 | 156 | 8.59e-33 | 115 |
MS.gene77713.t1 | AT2G14210 | 40.556 | 180 | 91 | 2 | 1 | 173 | 1 | 171 | 9.26e-33 | 118 |
MS.gene77713.t1 | AT2G14210 | 40.556 | 180 | 91 | 2 | 1 | 173 | 1 | 171 | 1.07e-32 | 117 |
MS.gene77713.t1 | AT5G13790 | 36.232 | 207 | 114 | 4 | 1 | 198 | 1 | 198 | 1.12e-32 | 119 |
MS.gene77713.t1 | AT4G37940 | 41.611 | 149 | 84 | 3 | 1 | 149 | 1 | 146 | 1.65e-32 | 115 |
MS.gene77713.t1 | AT5G23260 | 36.842 | 190 | 115 | 2 | 1 | 189 | 1 | 186 | 2.82e-32 | 117 |
MS.gene77713.t1 | AT5G62165 | 40.541 | 148 | 86 | 2 | 1 | 148 | 1 | 146 | 2.99e-32 | 114 |
MS.gene77713.t1 | AT5G62165 | 40.541 | 148 | 86 | 2 | 1 | 148 | 1 | 146 | 2.99e-32 | 114 |
MS.gene77713.t1 | AT5G62165 | 40.541 | 148 | 86 | 2 | 1 | 148 | 1 | 146 | 2.99e-32 | 114 |
MS.gene77713.t1 | AT5G62165 | 40.541 | 148 | 86 | 2 | 1 | 148 | 1 | 146 | 2.99e-32 | 114 |
MS.gene77713.t1 | AT5G62165 | 40.541 | 148 | 86 | 2 | 1 | 148 | 1 | 146 | 2.99e-32 | 114 |
MS.gene77713.t1 | AT3G61120 | 42.045 | 176 | 84 | 3 | 1 | 169 | 1 | 165 | 3.08e-32 | 117 |
MS.gene77713.t1 | AT5G23260 | 36.842 | 190 | 115 | 2 | 1 | 189 | 17 | 202 | 4.31e-32 | 117 |
MS.gene77713.t1 | AT4G11880 | 41.520 | 171 | 94 | 2 | 1 | 169 | 1 | 167 | 5.66e-32 | 115 |
MS.gene77713.t1 | AT4G11880 | 41.520 | 171 | 94 | 2 | 1 | 169 | 1 | 167 | 5.66e-32 | 115 |
MS.gene77713.t1 | AT3G57230 | 40.816 | 147 | 80 | 3 | 1 | 145 | 1 | 142 | 7.82e-32 | 113 |
MS.gene77713.t1 | AT3G30260 | 39.744 | 156 | 85 | 2 | 1 | 152 | 1 | 151 | 8.22e-32 | 115 |
MS.gene77713.t1 | AT5G51870 | 36.686 | 169 | 106 | 1 | 1 | 169 | 1 | 168 | 2.83e-31 | 113 |
MS.gene77713.t1 | AT5G51870 | 36.686 | 169 | 106 | 1 | 1 | 169 | 1 | 168 | 4.12e-31 | 113 |
MS.gene77713.t1 | AT5G51870 | 36.686 | 169 | 106 | 1 | 1 | 169 | 11 | 178 | 8.15e-31 | 112 |
MS.gene77713.t1 | AT5G62165 | 40.972 | 144 | 83 | 2 | 1 | 144 | 1 | 142 | 2.10e-30 | 110 |
MS.gene77713.t1 | AT5G62165 | 40.972 | 144 | 83 | 2 | 1 | 144 | 1 | 142 | 2.10e-30 | 110 |
MS.gene77713.t1 | AT5G51870 | 37.838 | 148 | 91 | 1 | 1 | 148 | 1 | 147 | 3.84e-29 | 107 |
MS.gene77713.t1 | AT5G23260 | 36.316 | 190 | 111 | 3 | 1 | 189 | 17 | 197 | 5.28e-29 | 108 |
MS.gene77713.t1 | AT5G51860 | 37.952 | 166 | 96 | 3 | 1 | 163 | 1 | 162 | 8.57e-29 | 107 |
MS.gene77713.t1 | AT5G51870 | 37.086 | 151 | 94 | 1 | 1 | 151 | 24 | 173 | 8.81e-29 | 106 |
MS.gene77713.t1 | AT5G51860 | 37.952 | 166 | 96 | 3 | 1 | 163 | 1 | 162 | 9.39e-29 | 107 |
MS.gene77713.t1 | AT2G22630 | 37.209 | 172 | 93 | 3 | 1 | 166 | 1 | 163 | 1.29e-28 | 107 |
MS.gene77713.t1 | AT2G22630 | 37.209 | 172 | 93 | 3 | 1 | 166 | 1 | 163 | 1.29e-28 | 107 |
MS.gene77713.t1 | AT5G23260 | 39.474 | 152 | 87 | 2 | 1 | 151 | 1 | 148 | 1.08e-27 | 105 |
MS.gene77713.t1 | AT3G57390 | 35.754 | 179 | 108 | 2 | 1 | 173 | 1 | 178 | 1.13e-26 | 102 |
MS.gene77713.t1 | AT3G57390 | 35.754 | 179 | 108 | 2 | 1 | 173 | 1 | 178 | 2.49e-26 | 102 |
MS.gene77713.t1 | AT2G22540 | 38.728 | 173 | 96 | 3 | 1 | 169 | 1 | 167 | 1.24e-25 | 99.8 |
MS.gene77713.t1 | AT2G22540 | 38.728 | 173 | 96 | 3 | 1 | 169 | 1 | 167 | 1.24e-25 | 99.8 |
MS.gene77713.t1 | AT4G24540 | 37.321 | 209 | 110 | 6 | 1 | 193 | 1 | 204 | 1.28e-25 | 99.4 |
MS.gene77713.t1 | AT5G62165 | 58.667 | 75 | 30 | 1 | 1 | 75 | 1 | 74 | 1.37e-25 | 95.9 |
MS.gene77713.t1 | AT2G22540 | 39.645 | 169 | 95 | 2 | 1 | 169 | 1 | 162 | 3.20e-24 | 95.9 |
MS.gene77713.t1 | AT5G20240 | 36.242 | 149 | 88 | 2 | 1 | 148 | 1 | 143 | 3.87e-24 | 95.1 |
MS.gene77713.t1 | AT5G20240 | 35.135 | 148 | 89 | 2 | 1 | 147 | 1 | 142 | 9.89e-24 | 92.4 |
MS.gene77713.t1 | AT5G65070 | 34.104 | 173 | 97 | 5 | 1 | 169 | 1 | 160 | 1.04e-23 | 93.6 |
MS.gene77713.t1 | AT5G65050 | 34.091 | 176 | 101 | 4 | 1 | 173 | 1 | 164 | 1.43e-23 | 92.8 |
MS.gene77713.t1 | AT5G65060 | 31.795 | 195 | 116 | 5 | 1 | 193 | 1 | 180 | 5.76e-23 | 91.7 |
MS.gene77713.t1 | AT3G54340 | 32.367 | 207 | 114 | 6 | 1 | 201 | 1 | 187 | 5.87e-23 | 92.4 |
MS.gene77713.t1 | AT5G65050 | 34.091 | 176 | 101 | 4 | 1 | 173 | 1 | 164 | 6.81e-23 | 91.7 |
MS.gene77713.t1 | AT1G31140 | 36.242 | 149 | 94 | 1 | 1 | 148 | 1 | 149 | 3.30e-22 | 90.1 |
MS.gene77713.t1 | AT5G65060 | 33.333 | 171 | 101 | 4 | 1 | 169 | 1 | 160 | 4.49e-22 | 89.4 |
MS.gene77713.t1 | AT5G65070 | 32.143 | 196 | 101 | 5 | 1 | 169 | 1 | 191 | 5.57e-22 | 89.7 |
MS.gene77713.t1 | AT5G65080 | 31.928 | 166 | 98 | 4 | 1 | 163 | 8 | 161 | 6.46e-22 | 89.0 |
MS.gene77713.t1 | AT1G31140 | 38.000 | 150 | 88 | 3 | 1 | 148 | 1 | 147 | 6.90e-22 | 89.4 |
MS.gene77713.t1 | AT5G10140 | 31.737 | 167 | 87 | 3 | 1 | 158 | 1 | 149 | 7.54e-22 | 88.2 |
MS.gene77713.t1 | AT5G65050 | 33.333 | 180 | 94 | 4 | 1 | 177 | 1 | 157 | 1.46e-21 | 87.8 |
MS.gene77713.t1 | AT5G65050 | 34.356 | 163 | 92 | 4 | 1 | 160 | 1 | 151 | 4.81e-21 | 86.3 |
MS.gene77713.t1 | AT5G65070 | 48.571 | 70 | 36 | 0 | 1 | 70 | 1 | 70 | 7.34e-21 | 84.7 |
MS.gene77713.t1 | AT5G10140 | 32.484 | 157 | 79 | 3 | 1 | 148 | 1 | 139 | 1.21e-20 | 84.7 |
MS.gene77713.t1 | AT5G65070 | 30.882 | 204 | 109 | 5 | 1 | 177 | 1 | 199 | 1.54e-20 | 85.5 |
MS.gene77713.t1 | AT5G65060 | 32.402 | 179 | 97 | 4 | 1 | 177 | 1 | 157 | 1.77e-20 | 84.7 |
MS.gene77713.t1 | AT5G10140 | 32.484 | 157 | 79 | 3 | 1 | 148 | 1 | 139 | 1.85e-20 | 84.7 |
MS.gene77713.t1 | AT5G10140 | 32.484 | 157 | 79 | 3 | 1 | 148 | 1 | 139 | 2.64e-20 | 84.7 |
MS.gene77713.t1 | AT1G77080 | 33.146 | 178 | 108 | 3 | 1 | 177 | 1 | 168 | 3.82e-20 | 84.3 |
MS.gene77713.t1 | AT5G65070 | 31.795 | 195 | 104 | 6 | 1 | 169 | 1 | 192 | 4.46e-20 | 84.7 |
MS.gene77713.t1 | AT1G77080 | 33.529 | 170 | 102 | 3 | 1 | 169 | 1 | 160 | 4.83e-20 | 83.6 |
MS.gene77713.t1 | AT1G77080 | 33.529 | 170 | 102 | 3 | 1 | 169 | 1 | 160 | 8.69e-20 | 82.8 |
MS.gene77713.t1 | AT1G77080 | 29.703 | 202 | 110 | 4 | 1 | 177 | 1 | 195 | 2.63e-18 | 80.1 |
MS.gene77713.t1 | AT1G77080 | 32.778 | 180 | 102 | 5 | 1 | 177 | 1 | 164 | 1.86e-17 | 77.0 |
MS.gene77713.t1 | AT5G65080 | 52.542 | 59 | 28 | 0 | 1 | 59 | 8 | 66 | 4.62e-16 | 73.6 |
MS.gene77713.t1 | AT1G77980 | 44.595 | 74 | 41 | 0 | 1 | 74 | 1 | 74 | 6.46e-16 | 75.1 |
MS.gene77713.t1 | AT4G37435 | 37.168 | 113 | 68 | 1 | 1 | 113 | 1 | 110 | 1.12e-15 | 72.0 |
MS.gene77713.t1 | AT1G22130 | 42.667 | 75 | 43 | 0 | 1 | 75 | 1 | 75 | 2.27e-15 | 73.6 |
MS.gene77713.t1 | AT1G77080 | 32.919 | 161 | 89 | 5 | 1 | 158 | 1 | 145 | 2.91e-15 | 70.1 |
MS.gene77713.t1 | AT1G72350 | 47.887 | 71 | 34 | 1 | 2 | 72 | 43 | 110 | 1.54e-14 | 69.7 |
MS.gene77713.t1 | AT2G34440 | 34.259 | 108 | 67 | 2 | 1 | 105 | 1 | 107 | 4.45e-14 | 67.8 |
MS.gene77713.t1 | AT1G77950 | 36.585 | 82 | 52 | 0 | 1 | 82 | 1 | 82 | 3.16e-13 | 66.6 |
MS.gene77713.t1 | AT1G77950 | 36.585 | 82 | 52 | 0 | 1 | 82 | 1 | 82 | 3.16e-13 | 66.6 |
MS.gene77713.t1 | AT1G77950 | 36.585 | 82 | 52 | 0 | 1 | 82 | 1 | 82 | 3.16e-13 | 66.6 |
MS.gene77713.t1 | AT1G77950 | 36.585 | 82 | 52 | 0 | 1 | 82 | 1 | 82 | 3.16e-13 | 66.6 |
MS.gene77713.t1 | AT2G24840 | 42.254 | 71 | 40 | 1 | 1 | 71 | 62 | 131 | 3.20e-13 | 67.0 |
MS.gene77713.t1 | AT2G03060 | 44.000 | 75 | 41 | 1 | 1 | 74 | 1 | 75 | 1.41e-12 | 65.9 |
MS.gene77713.t1 | AT2G03060 | 44.000 | 75 | 41 | 1 | 1 | 74 | 1 | 75 | 1.41e-12 | 65.9 |
MS.gene77713.t1 | AT2G03060 | 44.000 | 75 | 41 | 1 | 1 | 74 | 1 | 75 | 1.41e-12 | 65.9 |
MS.gene77713.t1 | AT1G01530 | 48.276 | 58 | 30 | 0 | 1 | 58 | 6 | 63 | 1.43e-12 | 64.7 |
MS.gene77713.t1 | AT2G03060 | 44.000 | 75 | 41 | 1 | 1 | 74 | 1 | 75 | 1.60e-12 | 65.9 |
MS.gene77713.t1 | AT3G66656 | 46.552 | 58 | 31 | 0 | 1 | 58 | 1 | 58 | 1.87e-12 | 63.5 |
MS.gene77713.t1 | AT1G18750 | 41.333 | 75 | 43 | 1 | 1 | 74 | 1 | 75 | 6.77e-12 | 63.9 |
MS.gene77713.t1 | AT1G18750 | 37.113 | 97 | 56 | 2 | 1 | 96 | 1 | 93 | 6.83e-12 | 63.9 |
MS.gene77713.t1 | AT1G18750 | 41.333 | 75 | 43 | 1 | 1 | 74 | 1 | 75 | 7.02e-12 | 63.9 |
MS.gene77713.t1 | AT1G69540 | 39.189 | 74 | 45 | 0 | 1 | 74 | 1 | 74 | 1.68e-11 | 62.8 |
MS.gene77713.t1 | AT4G36590 | 43.478 | 69 | 38 | 1 | 2 | 70 | 7 | 74 | 2.00e-11 | 61.6 |
MS.gene77713.t1 | AT1G69540 | 39.189 | 74 | 45 | 0 | 1 | 74 | 1 | 74 | 2.41e-11 | 62.4 |
Find 51 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATTTGTTTGGAGGAGGATT+AGG | 0.243362 | 4.4:+68153271 | MS.gene77713:CDS |
CGTGCTTCAGTTACAGCTTC+AGG | 0.305131 | 4.4:-68147752 | None:intergenic |
GTGCTTTGCGATGCTGAAAT+TGG | 0.317759 | 4.4:+68147144 | MS.gene77713:CDS |
TTGAAAAGAACCTCGAAATC+TGG | 0.328582 | 4.4:+68153323 | MS.gene77713:CDS |
TAACCTTATCCCTCAAAGTT+TGG | 0.340993 | 4.4:-68153528 | None:intergenic |
ATTTGTTTGGAGGAGGATTA+GGG | 0.367328 | 4.4:+68153272 | MS.gene77713:CDS |
AAATAAGTATCTCCATGATT+TGG | 0.377590 | 4.4:+68157441 | MS.gene77713:CDS |
AATCCAAACTTTGAGGGATA+AGG | 0.388651 | 4.4:+68153525 | MS.gene77713:CDS |
ATTATTGGCAGGTATTTGTT+TGG | 0.401347 | 4.4:+68153259 | MS.gene77713:intron |
TGGAGGAGGATTAGGGACTA+TGG | 0.415641 | 4.4:+68153279 | MS.gene77713:CDS |
ATTTAAGGAGGGAACACTTA+AGG | 0.425708 | 4.4:+68157414 | MS.gene77713:intron |
GGCAGGTATTTGTTTGGAGG+AGG | 0.434879 | 4.4:+68153265 | MS.gene77713:intron |
TTCCCACTAATTATACAAGA+TGG | 0.434963 | 4.4:+68157626 | MS.gene77713:CDS |
AGAGATCGATACCTTGCAAA+AGG | 0.454575 | 4.4:+68152286 | MS.gene77713:CDS |
ATCCCATCTTGTATAATTAG+TGG | 0.454812 | 4.4:-68157629 | None:intergenic |
CCGAGCGGGGCTTCTGAAGA+AGG | 0.465308 | 4.4:+68147107 | MS.gene77713:CDS |
ATGAATATATTACCAAATCA+TGG | 0.474738 | 4.4:-68157453 | None:intergenic |
ACTTTCTGTAAGCGCCGAGC+GGG | 0.485647 | 4.4:+68147093 | MS.gene77713:CDS |
ATTGGCAGGTATTTGTTTGG+AGG | 0.487880 | 4.4:+68153262 | MS.gene77713:intron |
CACAAGAAATCCAAACTTTG+AGG | 0.490472 | 4.4:+68153518 | MS.gene77713:CDS |
CTCTATGAACTCGCCACCAA+AGG | 0.491747 | 4.4:+68147195 | MS.gene77713:CDS |
CTTCTCTATTAGCCCTTGCA+TGG | 0.492434 | 4.4:-68147702 | None:intergenic |
CATTATACATCCAGATTTCG+AGG | 0.493442 | 4.4:-68153333 | None:intergenic |
AAAGTCACTTGCCTATGCAC+TGG | 0.499125 | 4.4:-68147075 | None:intergenic |
AACGAAGTATCAGTAGCAAA+TGG | 0.506323 | 4.4:-68157605 | None:intergenic |
TGAAGCACGTCCTCTTGTAT+TGG | 0.509803 | 4.4:+68147766 | MS.gene77713:CDS |
TCCCACTAATTATACAAGAT+GGG | 0.527346 | 4.4:+68157627 | MS.gene77713:CDS |
CCTTCTTCAGAAGCCCCGCT+CGG | 0.527878 | 4.4:-68147107 | None:intergenic |
TTCATAGAGCTTTCCATGAG+CGG | 0.532053 | 4.4:-68147181 | None:intergenic |
ACAAGAAATCCAAACTTTGA+GGG | 0.536382 | 4.4:+68153519 | MS.gene77713:CDS |
ATACCTTGCAAAAGGGTCTC+CGG | 0.540964 | 4.4:+68152294 | MS.gene77713:CDS |
GTATAATGTTCGCTCAATGA+AGG | 0.550286 | 4.4:+68153348 | MS.gene77713:CDS |
TCTATGAACTCGCCACCAAA+GGG | 0.554348 | 4.4:+68147196 | MS.gene77713:CDS |
TCCCATCTTGTATAATTAGT+GGG | 0.555246 | 4.4:-68157628 | None:intergenic |
AATCGACATGGCTCGAGGGA+AGG | 0.556037 | 4.4:+68147029 | None:intergenic |
AAGTCACTTGCCTATGCACT+GGG | 0.560730 | 4.4:-68147074 | None:intergenic |
ATGAAATGAAGAACCATGCA+AGG | 0.564040 | 4.4:+68147689 | MS.gene77713:intron |
TCATATCTAGGATGCTAAAG+AGG | 0.576504 | 4.4:+68152244 | MS.gene77713:intron |
AAAAGAGACATACCCTTTGG+TGG | 0.584684 | 4.4:-68147208 | None:intergenic |
GAGATCGATACCTTGCAAAA+GGG | 0.585390 | 4.4:+68152287 | MS.gene77713:CDS |
AGGATTAGGGACTATGGCAA+TGG | 0.589394 | 4.4:+68153285 | MS.gene77713:CDS |
CTCGAGGGAAGGTTCAGCTA+AGG | 0.594828 | 4.4:+68147040 | MS.gene77713:CDS |
GAATTGAGAACCCAGTGCAT+AGG | 0.599037 | 4.4:+68147064 | MS.gene77713:CDS |
GGGGCTTCTGAAGAAGGCTA+AGG | 0.602676 | 4.4:+68147113 | MS.gene77713:CDS |
GATCTCTTGCTTGAGCACAT+TGG | 0.611486 | 4.4:-68152270 | None:intergenic |
CTTTCTGTAAGCGCCGAGCG+GGG | 0.616522 | 4.4:+68147094 | MS.gene77713:CDS |
TAGAGACATACCAATACAAG+AGG | 0.623099 | 4.4:-68147776 | None:intergenic |
TGAAATGAAGAACCATGCAA+GGG | 0.639061 | 4.4:+68147690 | MS.gene77713:intron |
GACTTTCTGTAAGCGCCGAG+CGG | 0.650769 | 4.4:+68147092 | MS.gene77713:CDS |
TAAGGAGGGAACACTTAAGG+CGG | 0.674035 | 4.4:+68157417 | MS.gene77713:intron |
AAGTACTTGAAGTTCACACG+AGG | 0.761674 | 4.4:+68147722 | MS.gene77713:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 68147036 | 68157664 | 68147036 | ID=MS.gene77713 |
chr4.4 | mRNA | 68147036 | 68157664 | 68147036 | ID=MS.gene77713.t1;Parent=MS.gene77713 |
chr4.4 | exon | 68147036 | 68147217 | 68147036 | ID=MS.gene77713.t1.exon1;Parent=MS.gene77713.t1 |
chr4.4 | CDS | 68147036 | 68147217 | 68147036 | ID=cds.MS.gene77713.t1;Parent=MS.gene77713.t1 |
chr4.4 | exon | 68147700 | 68147787 | 68147700 | ID=MS.gene77713.t1.exon2;Parent=MS.gene77713.t1 |
chr4.4 | CDS | 68147700 | 68147787 | 68147700 | ID=cds.MS.gene77713.t1;Parent=MS.gene77713.t1 |
chr4.4 | exon | 68152254 | 68152315 | 68152254 | ID=MS.gene77713.t1.exon3;Parent=MS.gene77713.t1 |
chr4.4 | CDS | 68152254 | 68152315 | 68152254 | ID=cds.MS.gene77713.t1;Parent=MS.gene77713.t1 |
chr4.4 | exon | 68153270 | 68153369 | 68153270 | ID=MS.gene77713.t1.exon4;Parent=MS.gene77713.t1 |
chr4.4 | CDS | 68153270 | 68153369 | 68153270 | ID=cds.MS.gene77713.t1;Parent=MS.gene77713.t1 |
chr4.4 | exon | 68153505 | 68153546 | 68153505 | ID=MS.gene77713.t1.exon5;Parent=MS.gene77713.t1 |
chr4.4 | CDS | 68153505 | 68153546 | 68153505 | ID=cds.MS.gene77713.t1;Parent=MS.gene77713.t1 |
chr4.4 | exon | 68157421 | 68157462 | 68157421 | ID=MS.gene77713.t1.exon6;Parent=MS.gene77713.t1 |
chr4.4 | CDS | 68157421 | 68157462 | 68157421 | ID=cds.MS.gene77713.t1;Parent=MS.gene77713.t1 |
chr4.4 | exon | 68157572 | 68157664 | 68157572 | ID=MS.gene77713.t1.exon7;Parent=MS.gene77713.t1 |
chr4.4 | CDS | 68157572 | 68157664 | 68157572 | ID=cds.MS.gene77713.t1;Parent=MS.gene77713.t1 |
Gene Sequence |
Protein sequence |