Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78867.t1 | XP_003628026.1 | 96.6 | 588 | 19 | 1 | 37 | 623 | 37 | 624 | 0.00E+00 | 1104.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78867.t1 | G7LIE5 | 96.6 | 588 | 19 | 1 | 37 | 623 | 37 | 624 | 0.0e+00 | 1104.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049801 | MS.gene78867 | 0.812463 | 4.19E-51 | -1.69E-46 |
| MS.gene049983 | MS.gene78867 | 0.817588 | 3.05E-52 | -1.69E-46 |
| MS.gene050654 | MS.gene78867 | 0.80411 | 2.53E-49 | -1.69E-46 |
| MS.gene050737 | MS.gene78867 | 0.838536 | 2.71E-57 | -1.69E-46 |
| MS.gene050941 | MS.gene78867 | 0.87265 | 2.70E-67 | -1.69E-46 |
| MS.gene051003 | MS.gene78867 | 0.817166 | 3.80E-52 | -1.69E-46 |
| MS.gene051122 | MS.gene78867 | 0.804165 | 2.46E-49 | -1.69E-46 |
| MS.gene052674 | MS.gene78867 | 0.839565 | 1.47E-57 | -1.69E-46 |
| MS.gene052675 | MS.gene78867 | 0.83354 | 5.03E-56 | -1.69E-46 |
| MS.gene052677 | MS.gene78867 | 0.834261 | 3.32E-56 | -1.69E-46 |
| MS.gene053726 | MS.gene78867 | 0.807243 | 5.56E-50 | -1.69E-46 |
| MS.gene054479 | MS.gene78867 | 0.803027 | 4.24E-49 | -1.69E-46 |
| MS.gene056480 | MS.gene78867 | 0.806755 | 7.05E-50 | -1.69E-46 |
| MS.gene058223 | MS.gene78867 | -0.823228 | 1.55E-53 | -1.69E-46 |
| MS.gene059283 | MS.gene78867 | 0.840465 | 8.56E-58 | -1.69E-46 |
| MS.gene059290 | MS.gene78867 | 0.802193 | 6.30E-49 | -1.69E-46 |
| MS.gene06010 | MS.gene78867 | 0.805545 | 1.27E-49 | -1.69E-46 |
| MS.gene060296 | MS.gene78867 | 0.808123 | 3.61E-50 | -1.69E-46 |
| MS.gene060527 | MS.gene78867 | 0.80612 | 9.60E-50 | -1.69E-46 |
| MS.gene06052 | MS.gene78867 | 0.831361 | 1.74E-55 | -1.69E-46 |
| MS.gene060932 | MS.gene78867 | 0.83851 | 2.76E-57 | -1.69E-46 |
| MS.gene060935 | MS.gene78867 | 0.801419 | 9.09E-49 | -1.69E-46 |
| MS.gene06121 | MS.gene78867 | 0.836234 | 1.05E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78867.t1 | MTR_8g041570 | 96.795 | 624 | 19 | 1 | 1 | 623 | 1 | 624 | 0.0 | 1255 |
| MS.gene78867.t1 | MTR_5g088750 | 38.519 | 675 | 314 | 20 | 18 | 621 | 17 | 661 | 1.55e-115 | 359 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78867.t1 | AT2G26920 | 35.608 | 674 | 310 | 24 | 18 | 619 | 22 | 643 | 5.49e-82 | 271 |
| MS.gene78867.t1 | AT5G12120 | 51.128 | 266 | 112 | 5 | 1 | 256 | 1 | 258 | 4.87e-70 | 238 |
Find 153 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAATATTCCCATGTATT+TGG | 0.095875 | 8.3:-56496762 | MS.gene78867:CDS |
| AGGAAAGGTAACAAACTTTC+TGG | 0.245346 | 8.3:+56496260 | None:intergenic |
| ACATGGGAATATTCTTTATA+AGG | 0.275764 | 8.3:+56496768 | None:intergenic |
| TCTAATAACGGCAGTTGTTC+TGG | 0.279190 | 8.3:-56497851 | MS.gene78867:CDS |
| TGTTCCATGATCCTGAAAAT+AGG | 0.320132 | 8.3:-56497190 | MS.gene78867:CDS |
| AAGAATATTCCCATGTATTT+GGG | 0.321676 | 8.3:-56496761 | MS.gene78867:CDS |
| TTGGCTGTTGTCATTAACTA+TGG | 0.321935 | 8.3:+56497946 | None:intergenic |
| TTAGTAGATCCGGAAGTCTT+TGG | 0.322942 | 8.3:+56498031 | None:intergenic |
| CTCTCCTTTCCCTCTGTCTC+TGG | 0.344034 | 8.3:+56497714 | None:intergenic |
| CATCTGCTGGATTGCGAGAT+TGG | 0.345147 | 8.3:-56496320 | MS.gene78867:CDS |
| ATGGATTGTAACATATTAGA+AGG | 0.352212 | 8.3:+56497089 | None:intergenic |
| TGAGAAACAACGCCGGGAAT+AGG | 0.355492 | 8.3:-56496401 | MS.gene78867:CDS |
| TCGAGATCGCACGCACTAGA+AGG | 0.367011 | 8.3:+56497992 | None:intergenic |
| AACATATTAGAAGGATTTGA+TGG | 0.388055 | 8.3:+56497098 | None:intergenic |
| CTTACAGTTCCACCTTCCCT+TGG | 0.389072 | 8.3:-56496597 | MS.gene78867:CDS |
| AGGCACAGCCGAGTGCCTTT+AGG | 0.397963 | 8.3:-56497037 | MS.gene78867:CDS |
| TACATACCAACTAGATGTTC+CGG | 0.406942 | 8.3:+56496899 | None:intergenic |
| TATGATTCTGTTTCTAATAA+CGG | 0.410813 | 8.3:-56497863 | MS.gene78867:CDS |
| TCACATGTGGATTGGAATAC+CGG | 0.413944 | 8.3:-56496525 | MS.gene78867:CDS |
| TGCAGCCTTCGCCTTCGACT+TGG | 0.424604 | 8.3:+56498075 | None:intergenic |
| AATGTCACCGTATGTTAAAA+TGG | 0.428913 | 8.3:-56497060 | MS.gene78867:CDS |
| AGAACTGGCCATCCTATTCC+CGG | 0.430476 | 8.3:+56496389 | None:intergenic |
| AAGCCATACATCACCTGATC+TGG | 0.432955 | 8.3:+56496440 | None:intergenic |
| TAATAGTTCGATGAGATCTC+AGG | 0.433345 | 8.3:-56497297 | MS.gene78867:CDS |
| CGGCAGTTGTTCTGGTGAAT+CGG | 0.434328 | 8.3:-56497843 | MS.gene78867:CDS |
| TTACAGTTCCACCTTCCCTT+GGG | 0.436626 | 8.3:-56496596 | MS.gene78867:CDS |
| GTTCACATTCACATGTGGAT+TGG | 0.443458 | 8.3:-56496533 | MS.gene78867:CDS |
| TTGGTATGTAAATAGTGTTC+CGG | 0.444465 | 8.3:-56496886 | MS.gene78867:CDS |
| GCTTGAACAAATTTATGCTC+TGG | 0.448008 | 8.3:-56497459 | MS.gene78867:CDS |
| TGAGACTGAGAAGGCATTGT+AGG | 0.450251 | 8.3:+56496666 | None:intergenic |
| CGATCCAGTCATATAAGAAC+TGG | 0.453454 | 8.3:+56496374 | None:intergenic |
| TGCTCGTCGGCATCCAGATC+AGG | 0.454135 | 8.3:-56496453 | MS.gene78867:CDS |
| ATGAACTGACACAGAAAAGA+TGG | 0.455206 | 8.3:-56497136 | MS.gene78867:CDS |
| TCAAATTACCATCGCTTACA+AGG | 0.456736 | 8.3:+56497501 | None:intergenic |
| CAAAGCCAACGTTGCTCGCT+CGG | 0.460956 | 8.3:+56497601 | None:intergenic |
| TTCAATCTCATCAGGTGGAA+TGG | 0.464377 | 8.3:-56496727 | MS.gene78867:CDS |
| AAGACTTCTCCAAAGACTTC+CGG | 0.464853 | 8.3:-56498040 | MS.gene78867:CDS |
| AGGGAAATTTCATCATCTGC+TGG | 0.467801 | 8.3:-56496333 | MS.gene78867:CDS |
| CATCCAGATCAGGTGATGTA+TGG | 0.470323 | 8.3:-56496443 | MS.gene78867:CDS |
| TCGACTACAACAATATAGAT+TGG | 0.471505 | 8.3:-56496485 | MS.gene78867:CDS |
| TCAATCTCATCAGGTGGAAT+GGG | 0.472852 | 8.3:-56496726 | MS.gene78867:CDS |
| AATCTGCCGGCCCAAATACA+TGG | 0.476192 | 8.3:+56496751 | None:intergenic |
| CATTCTTCCGTCGTTCCTAA+AGG | 0.476672 | 8.3:+56497022 | None:intergenic |
| TCAAGGAGTAGGAAGGGAAC+AGG | 0.480070 | 8.3:-56496994 | MS.gene78867:CDS |
| ATACGGTGACATTGCTTGCA+TGG | 0.482137 | 8.3:+56497070 | None:intergenic |
| AAAACTTGTGCAGAAGTTAG+TGG | 0.483211 | 8.3:-56497639 | MS.gene78867:CDS |
| TCTATGAATTCCATACCTTC+CGG | 0.483583 | 8.3:-56496918 | MS.gene78867:CDS |
| GCAGATTCTTCAATCTCATC+AGG | 0.484175 | 8.3:-56496735 | MS.gene78867:CDS |
| GCTCTCATCATTAGTAGATC+CGG | 0.484784 | 8.3:+56498021 | None:intergenic |
| GAAGGTGGAACTGTAAGTGC+AGG | 0.489811 | 8.3:+56496603 | None:intergenic |
| CACATGTGGATTGGAATACC+GGG | 0.491320 | 8.3:-56496524 | MS.gene78867:CDS |
| ACGAAAATACAAGGTCGAAT+GGG | 0.496043 | 8.3:-56496860 | MS.gene78867:CDS |
| TTCCGTGAGCCGTGATGTTG+AGG | 0.498017 | 8.3:+56496642 | None:intergenic |
| ACTAGATGTTCCGGAAGGTA+TGG | 0.498200 | 8.3:+56496908 | None:intergenic |
| GCTTCCTCTCATTCTTCAGT+CGG | 0.502524 | 8.3:+56497738 | None:intergenic |
| AGGAAGAATCTCATTTGAAT+CGG | 0.506944 | 8.3:-56497340 | MS.gene78867:CDS |
| GGAAAGGTAACAAACTTTCT+GGG | 0.507017 | 8.3:+56496261 | None:intergenic |
| AATATGTCCTTCCCAGCAAA+AGG | 0.507323 | 8.3:+56496291 | None:intergenic |
| TGTGCAGAAGTTAGTGGCGA+TGG | 0.510221 | 8.3:-56497633 | MS.gene78867:CDS |
| CTGTGAAGGTGATCTTCAAA+AGG | 0.517565 | 8.3:-56497387 | MS.gene78867:CDS |
| AGATCAGGTGATGTATGGCT+TGG | 0.519919 | 8.3:-56496438 | MS.gene78867:CDS |
| ATGGCCAGTTCTTATATGAC+TGG | 0.522911 | 8.3:-56496378 | MS.gene78867:CDS |
| AGCACCAGAGACAGAGGGAA+AGG | 0.524230 | 8.3:-56497718 | MS.gene78867:CDS |
| ATTACCATCGCTTACAAGGT+TGG | 0.525468 | 8.3:+56497505 | None:intergenic |
| TACGAAAATACAAGGTCGAA+TGG | 0.529380 | 8.3:-56496861 | MS.gene78867:CDS |
| ACCCTCAACATCACGGCTCA+CGG | 0.530298 | 8.3:-56496644 | MS.gene78867:CDS |
| TACCTTCCGGAACATCTAGT+TGG | 0.530968 | 8.3:-56496905 | MS.gene78867:CDS |
| GTGCGATCTCGAAACATCAT+TGG | 0.535814 | 8.3:-56497981 | MS.gene78867:CDS |
| TCGATATCGTGGCTATTTGA+AGG | 0.535817 | 8.3:-56497551 | MS.gene78867:CDS |
| ACTCGGTTGGAATTTATACC+TGG | 0.536492 | 8.3:-56497788 | MS.gene78867:CDS |
| CAAAAGAGCCCAAGGGAAGG+TGG | 0.537570 | 8.3:+56496588 | None:intergenic |
| ATGACTGGATCGCGAAATGT+TGG | 0.538183 | 8.3:-56496363 | MS.gene78867:CDS |
| TTATGATCCCATTACTACAT+AGG | 0.546728 | 8.3:+56496237 | None:intergenic |
| TGAACTGACACAGAAAAGAT+GGG | 0.548313 | 8.3:-56497135 | MS.gene78867:CDS |
| GTCGAAGGCGAAGGCTGCAA+AGG | 0.548842 | 8.3:-56498071 | MS.gene78867:CDS |
| ATATTCCCATGTATTTGGGC+CGG | 0.551558 | 8.3:-56496757 | MS.gene78867:CDS |
| GTGCAGAAGTTAGTGGCGAT+GGG | 0.551834 | 8.3:-56497632 | MS.gene78867:CDS |
| CGTCGTTGAGAAACAACGCC+GGG | 0.551988 | 8.3:-56496407 | MS.gene78867:CDS |
| ATCTCATCAGGTGGAATGGG+AGG | 0.552551 | 8.3:-56496723 | MS.gene78867:CDS |
| TGCAAACTCATCTACTCGGT+TGG | 0.552784 | 8.3:-56497801 | MS.gene78867:CDS |
| ACTACTACAAAATCATGGCA+TGG | 0.554523 | 8.3:-56496832 | MS.gene78867:CDS |
| AATTTACTACTACAAAATCA+TGG | 0.562396 | 8.3:-56496837 | MS.gene78867:CDS |
| AATCATGGCATGGGAAATGT+CGG | 0.563598 | 8.3:-56496822 | MS.gene78867:CDS |
| TGTTTGGCATCGGCGAATTG+TGG | 0.563782 | 8.3:+56496954 | None:intergenic |
| CTACTACAAAATCATGGCAT+GGG | 0.564200 | 8.3:-56496831 | MS.gene78867:CDS |
| CACTACCGAGCGAGCAACGT+TGG | 0.564651 | 8.3:-56497606 | MS.gene78867:CDS |
| GCGAAATGTTGGCACGGCGA+GGG | 0.567379 | 8.3:-56496352 | MS.gene78867:CDS |
| CGCGAAATGTTGGCACGGCG+AGG | 0.567822 | 8.3:-56496353 | MS.gene78867:CDS |
| ATCTGCCGGCCCAAATACAT+GGG | 0.568471 | 8.3:+56496752 | None:intergenic |
| AGAATGATTCATCAAGGAGT+AGG | 0.573842 | 8.3:-56497005 | MS.gene78867:CDS |
| GATCATTCTATTAGTCCTCA+AGG | 0.577446 | 8.3:-56497899 | MS.gene78867:CDS |
| GAATTCTTGCACCATGCCCC+CGG | 0.581487 | 8.3:+56496506 | None:intergenic |
| CTGGTTGTGATAACGACAGA+AGG | 0.581636 | 8.3:-56497769 | MS.gene78867:CDS |
| TCCGTGAGCCGTGATGTTGA+GGG | 0.582113 | 8.3:+56496643 | None:intergenic |
| TTCTATTAGTCCTCAAGGAA+CGG | 0.582220 | 8.3:-56497894 | MS.gene78867:CDS |
| GAGCTTGAGAAAGTTGCTGC+AGG | 0.584773 | 8.3:+56496790 | None:intergenic |
| TGATTCATCAAGGAGTAGGA+AGG | 0.585649 | 8.3:-56497001 | MS.gene78867:CDS |
| AGAGGAAGCACCAGAGACAG+AGG | 0.586818 | 8.3:-56497724 | MS.gene78867:CDS |
| AAAATCCAAGTCGAAGGCGA+AGG | 0.590839 | 8.3:-56498080 | MS.gene78867:CDS |
| TTGCGGTCATCAGAATCCAT+CGG | 0.592019 | 8.3:-56496568 | MS.gene78867:CDS |
| GATGAGATTGAAGAATCTGC+CGG | 0.594518 | 8.3:+56496738 | None:intergenic |
| CAGTATCAATACAGCAGAGA+GGG | 0.594892 | 8.3:-56497259 | MS.gene78867:CDS |
| GGGAGGTTTCTATAAACCGA+TGG | 0.598021 | 8.3:-56496706 | MS.gene78867:CDS |
| CCGTCGTTCCTAAAGGCACT+CGG | 0.598969 | 8.3:+56497029 | None:intergenic |
| GAAATCAAAATCCAAGTCGA+AGG | 0.599824 | 8.3:-56498086 | MS.gene78867:CDS |
| GATGACCGCAAAAGAGCCCA+AGG | 0.600284 | 8.3:+56496580 | None:intergenic |
| AATAGTTCGATGAGATCTCA+GGG | 0.600975 | 8.3:-56497296 | MS.gene78867:CDS |
| ATTCAGTTCACATTCACATG+TGG | 0.601943 | 8.3:-56496538 | MS.gene78867:CDS |
| CCATTACTACATAGGAGGAA+AGG | 0.602158 | 8.3:+56496245 | None:intergenic |
| AAGCACGTTAAAATCTCAGA+AGG | 0.602359 | 8.3:-56497360 | MS.gene78867:CDS |
| TTCCGGCATACGAAAATACA+AGG | 0.602463 | 8.3:-56496869 | MS.gene78867:CDS |
| GACGGAAGAATGATTCATCA+AGG | 0.604217 | 8.3:-56497011 | MS.gene78867:CDS |
| CTTCTGTCGTTATCACAACC+AGG | 0.608348 | 8.3:+56497770 | None:intergenic |
| TGAGAAGGCATTGTAGGTGA+AGG | 0.611475 | 8.3:+56496672 | None:intergenic |
| GATTCATCAAGGAGTAGGAA+GGG | 0.611644 | 8.3:-56497000 | MS.gene78867:CDS |
| AAGGTGGAACTGTAAGTGCA+GGG | 0.611990 | 8.3:+56496604 | None:intergenic |
| TGATCCCATTACTACATAGG+AGG | 0.615657 | 8.3:+56496240 | None:intergenic |
| AAACAACGCCGGGAATAGGA+TGG | 0.619668 | 8.3:-56496397 | MS.gene78867:CDS |
| TGAATGTGAACTGAATGATC+TGG | 0.619752 | 8.3:+56496545 | None:intergenic |
| GAAGGTGACGATGCAACCAT+CGG | 0.620053 | 8.3:+56496690 | None:intergenic |
| AGAGCAGTTGTTGCCTGTGA+AGG | 0.626472 | 8.3:-56497401 | MS.gene78867:CDS |
| TGTAAGTGCAGGGGAAGATG+CGG | 0.627680 | 8.3:+56496614 | None:intergenic |
| TGGATCGCGAAATGTTGGCA+CGG | 0.629399 | 8.3:-56496358 | MS.gene78867:CDS |
| ACTACCAACCTTGTAAGCGA+TGG | 0.630386 | 8.3:-56497509 | MS.gene78867:CDS |
| GATTCTTCAATCTCATCAGG+TGG | 0.630854 | 8.3:-56496732 | MS.gene78867:CDS |
| TGCTGTATTGATACTGACGC+TGG | 0.632713 | 8.3:+56497266 | None:intergenic |
| AGATCCGACTGAAGAATGAG+AGG | 0.634680 | 8.3:-56497742 | MS.gene78867:CDS |
| GAACTGAATGATCTGGCCGA+TGG | 0.636126 | 8.3:+56496552 | None:intergenic |
| TTGGAGTTTAGATTGCTCGT+CGG | 0.636464 | 8.3:-56496466 | MS.gene78867:CDS |
| CAGTCTCACCCTCAACATCA+CGG | 0.637258 | 8.3:-56496651 | MS.gene78867:CDS |
| GAGGAAGCACCAGAGACAGA+GGG | 0.640584 | 8.3:-56497723 | MS.gene78867:CDS |
| TACTCAGACACCGTTCCTTG+AGG | 0.642758 | 8.3:+56497884 | None:intergenic |
| AAGTGCAGGGGAAGATGCGG+CGG | 0.643906 | 8.3:+56496617 | None:intergenic |
| AATTAGAAGAATCGATATCG+TGG | 0.648950 | 8.3:-56497562 | MS.gene78867:CDS |
| TGGTTGTGATAACGACAGAA+GGG | 0.649400 | 8.3:-56497768 | MS.gene78867:CDS |
| CCGCAAAAGAGCCCAAGGGA+AGG | 0.656859 | 8.3:+56496585 | None:intergenic |
| AAGCTGCAAACTCATCTACT+CGG | 0.657093 | 8.3:-56497805 | MS.gene78867:CDS |
| GTCCTTCCCAGCAAAAGGTG+AGG | 0.666833 | 8.3:+56496296 | None:intergenic |
| CCGAGTGCCTTTAGGAACGA+CGG | 0.668148 | 8.3:-56497029 | MS.gene78867:CDS |
| TGATTCAAGTGTAGAGACTG+TGG | 0.675419 | 8.3:+56497164 | None:intergenic |
| ATATCGTGGCTATTTGAAGG+AGG | 0.676954 | 8.3:-56497548 | MS.gene78867:CDS |
| AGGTGGAACTGTAAGTGCAG+GGG | 0.680688 | 8.3:+56496605 | None:intergenic |
| TTCAACTATTACAATGTACG+TGG | 0.683105 | 8.3:-56497224 | MS.gene78867:CDS |
| ACATGTGGATTGGAATACCG+GGG | 0.687769 | 8.3:-56496523 | MS.gene78867:CDS |
| TTGGCTTTGAAGTTAAACAA+CGG | 0.688283 | 8.3:-56497587 | MS.gene78867:CDS |
| TCGTCGTTGAGAAACAACGC+CGG | 0.691823 | 8.3:-56496408 | MS.gene78867:CDS |
| GAACTGACACAGAAAAGATG+GGG | 0.693814 | 8.3:-56497134 | MS.gene78867:CDS |
| GTCACCGTATGTTAAAATGG+AGG | 0.695807 | 8.3:-56497057 | MS.gene78867:CDS |
| TACCAACTAGATGTTCCGGA+AGG | 0.699009 | 8.3:+56496903 | None:intergenic |
| TCAGTATCAATACAGCAGAG+AGG | 0.701867 | 8.3:-56497260 | MS.gene78867:CDS |
| CATGTGGATTGGAATACCGG+GGG | 0.716378 | 8.3:-56496522 | MS.gene78867:CDS |
| ATGACCGCAAAAGAGCCCAA+GGG | 0.718537 | 8.3:+56496581 | None:intergenic |
| TGTTGAGGGTGAGACTGAGA+AGG | 0.739379 | 8.3:+56496657 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTACTACTACAAAATCA+TGG | - | chr8.3:56497514-56497533 | MS.gene78867:CDS | 20.0% |
| !!! | AGAATTCAGATAATTTTGTT+TGG | + | chr8.3:56497416-56497435 | None:intergenic | 20.0% |
| !!! | TATGATTCTGTTTCTAATAA+CGG | - | chr8.3:56496488-56496507 | MS.gene78867:CDS | 20.0% |
| !!! | TTTCATTTATTTTTGCGAAT+TGG | + | chr8.3:56496427-56496446 | None:intergenic | 20.0% |
| ! | AAAGAATATTCCCATGTATT+TGG | - | chr8.3:56497589-56497608 | MS.gene78867:CDS | 25.0% |
| ! | AACATATTAGAAGGATTTGA+TGG | + | chr8.3:56497256-56497275 | None:intergenic | 25.0% |
| ! | AAGAATATTCCCATGTATTT+GGG | - | chr8.3:56497590-56497609 | MS.gene78867:CDS | 25.0% |
| ! | ACATGGGAATATTCTTTATA+AGG | + | chr8.3:56497586-56497605 | None:intergenic | 25.0% |
| !! | ATGGATTGTAACATATTAGA+AGG | + | chr8.3:56497265-56497284 | None:intergenic | 25.0% |
| !!! | TTGGATTTTGATTTCATTGA+TGG | + | chr8.3:56496260-56496279 | None:intergenic | 25.0% |
| AATGTCACCGTATGTTAAAA+TGG | - | chr8.3:56497291-56497310 | MS.gene78867:CDS | 30.0% | |
| AATTAGAAGAATCGATATCG+TGG | - | chr8.3:56496789-56496808 | MS.gene78867:CDS | 30.0% | |
| AGGAAGAATCTCATTTGAAT+CGG | - | chr8.3:56497011-56497030 | MS.gene78867:CDS | 30.0% | |
| TCGACTACAACAATATAGAT+TGG | - | chr8.3:56497866-56497885 | MS.gene78867:CDS | 30.0% | |
| TTCAACTATTACAATGTACG+TGG | - | chr8.3:56497127-56497146 | MS.gene78867:CDS | 30.0% | |
| TTGGTATGTAAATAGTGTTC+CGG | - | chr8.3:56497465-56497484 | MS.gene78867:CDS | 30.0% | |
| !! | CAGATAATTTTGTTTGGCAT+CGG | + | chr8.3:56497410-56497429 | None:intergenic | 30.0% |
| !! | TTGGCTTTGAAGTTAAACAA+CGG | - | chr8.3:56496764-56496783 | MS.gene78867:CDS | 30.0% |
| AAAACTTGTGCAGAAGTTAG+TGG | - | chr8.3:56496712-56496731 | MS.gene78867:CDS | 35.0% | |
| AAGCACGTTAAAATCTCAGA+AGG | - | chr8.3:56496991-56497010 | MS.gene78867:CDS | 35.0% | |
| AATAGTTCGATGAGATCTCA+GGG | - | chr8.3:56497055-56497074 | MS.gene78867:CDS | 35.0% | |
| ACGAAAATACAAGGTCGAAT+GGG | - | chr8.3:56497491-56497510 | MS.gene78867:CDS | 35.0% | |
| ACTACTACAAAATCATGGCA+TGG | - | chr8.3:56497519-56497538 | MS.gene78867:CDS | 35.0% | |
| AGAATGATTCATCAAGGAGT+AGG | - | chr8.3:56497346-56497365 | MS.gene78867:CDS | 35.0% | |
| AGGAAAGGTAACAAACTTTC+TGG | + | chr8.3:56498094-56498113 | None:intergenic | 35.0% | |
| ATGAACTGACACAGAAAAGA+TGG | - | chr8.3:56497215-56497234 | MS.gene78867:CDS | 35.0% | |
| ATTCAGTTCACATTCACATG+TGG | - | chr8.3:56497813-56497832 | MS.gene78867:CDS | 35.0% | |
| CTACTACAAAATCATGGCAT+GGG | - | chr8.3:56497520-56497539 | MS.gene78867:CDS | 35.0% | |
| GAAATCAAAATCCAAGTCGA+AGG | - | chr8.3:56496265-56496284 | MS.gene78867:CDS | 35.0% | |
| GATCATTCTATTAGTCCTCA+AGG | - | chr8.3:56496452-56496471 | MS.gene78867:CDS | 35.0% | |
| GCTTGAACAAATTTATGCTC+TGG | - | chr8.3:56496892-56496911 | MS.gene78867:CDS | 35.0% | |
| GGAAAGGTAACAAACTTTCT+GGG | + | chr8.3:56498093-56498112 | None:intergenic | 35.0% | |
| TAATAGTTCGATGAGATCTC+AGG | - | chr8.3:56497054-56497073 | MS.gene78867:CDS | 35.0% | |
| TACATACCAACTAGATGTTC+CGG | + | chr8.3:56497455-56497474 | None:intergenic | 35.0% | |
| TACGAAAATACAAGGTCGAA+TGG | - | chr8.3:56497490-56497509 | MS.gene78867:CDS | 35.0% | |
| TCAAATTACCATCGCTTACA+AGG | + | chr8.3:56496853-56496872 | None:intergenic | 35.0% | |
| TCTATGAATTCCATACCTTC+CGG | - | chr8.3:56497433-56497452 | MS.gene78867:CDS | 35.0% | |
| TGAACTGACACAGAAAAGAT+GGG | - | chr8.3:56497216-56497235 | MS.gene78867:CDS | 35.0% | |
| TGAATGTGAACTGAATGATC+TGG | + | chr8.3:56497809-56497828 | None:intergenic | 35.0% | |
| TGTTCCATGATCCTGAAAAT+AGG | - | chr8.3:56497161-56497180 | MS.gene78867:CDS | 35.0% | |
| TTCTATTAGTCCTCAAGGAA+CGG | - | chr8.3:56496457-56496476 | MS.gene78867:CDS | 35.0% | |
| TTGGCTGTTGTCATTAACTA+TGG | + | chr8.3:56496408-56496427 | None:intergenic | 35.0% | |
| !! | GATTCCTATTTTCAGGATCA+TGG | + | chr8.3:56497168-56497187 | None:intergenic | 35.0% |
| !! | TGTGCCTCCATTTTAACATA+CGG | + | chr8.3:56497301-56497320 | None:intergenic | 35.0% |
| AAGACTTCTCCAAAGACTTC+CGG | - | chr8.3:56496311-56496330 | MS.gene78867:CDS | 40.0% | |
| AAGCTGCAAACTCATCTACT+CGG | - | chr8.3:56496546-56496565 | MS.gene78867:CDS | 40.0% | |
| AATATGTCCTTCCCAGCAAA+AGG | + | chr8.3:56498063-56498082 | None:intergenic | 40.0% | |
| AATCATGGCATGGGAAATGT+CGG | - | chr8.3:56497529-56497548 | MS.gene78867:CDS | 40.0% | |
| ACTCGGTTGGAATTTATACC+TGG | - | chr8.3:56496563-56496582 | MS.gene78867:CDS | 40.0% | |
| AGGGAAATTTCATCATCTGC+TGG | - | chr8.3:56498018-56498037 | MS.gene78867:CDS | 40.0% | |
| ATATCGTGGCTATTTGAAGG+AGG | - | chr8.3:56496803-56496822 | MS.gene78867:CDS | 40.0% | |
| ATATTCCCATGTATTTGGGC+CGG | - | chr8.3:56497594-56497613 | MS.gene78867:CDS | 40.0% | |
| ATGGCCAGTTCTTATATGAC+TGG | - | chr8.3:56497973-56497992 | MS.gene78867:CDS | 40.0% | |
| ATTACCATCGCTTACAAGGT+TGG | + | chr8.3:56496849-56496868 | None:intergenic | 40.0% | |
| CAGTATCAATACAGCAGAGA+GGG | - | chr8.3:56497092-56497111 | MS.gene78867:CDS | 40.0% | |
| CGATCCAGTCATATAAGAAC+TGG | + | chr8.3:56497980-56497999 | None:intergenic | 40.0% | |
| CTGTGAAGGTGATCTTCAAA+AGG | - | chr8.3:56496964-56496983 | MS.gene78867:CDS | 40.0% | |
| GAACTGACACAGAAAAGATG+GGG | - | chr8.3:56497217-56497236 | MS.gene78867:CDS | 40.0% | |
| GACGGAAGAATGATTCATCA+AGG | - | chr8.3:56497340-56497359 | MS.gene78867:CDS | 40.0% | |
| GATGAGATTGAAGAATCTGC+CGG | + | chr8.3:56497616-56497635 | None:intergenic | 40.0% | |
| GATTCATCAAGGAGTAGGAA+GGG | - | chr8.3:56497351-56497370 | MS.gene78867:CDS | 40.0% | |
| GATTCTTCAATCTCATCAGG+TGG | - | chr8.3:56497619-56497638 | MS.gene78867:CDS | 40.0% | |
| GCAGATTCTTCAATCTCATC+AGG | - | chr8.3:56497616-56497635 | MS.gene78867:CDS | 40.0% | |
| GCTCTCATCATTAGTAGATC+CGG | + | chr8.3:56496333-56496352 | None:intergenic | 40.0% | |
| GTCACCGTATGTTAAAATGG+AGG | - | chr8.3:56497294-56497313 | MS.gene78867:CDS | 40.0% | |
| GTTCACATTCACATGTGGAT+TGG | - | chr8.3:56497818-56497837 | MS.gene78867:CDS | 40.0% | |
| TCAATCTCATCAGGTGGAAT+GGG | - | chr8.3:56497625-56497644 | MS.gene78867:CDS | 40.0% | |
| TCAGTATCAATACAGCAGAG+AGG | - | chr8.3:56497091-56497110 | MS.gene78867:CDS | 40.0% | |
| TCGATATCGTGGCTATTTGA+AGG | - | chr8.3:56496800-56496819 | MS.gene78867:CDS | 40.0% | |
| TCTAATAACGGCAGTTGTTC+TGG | - | chr8.3:56496500-56496519 | MS.gene78867:CDS | 40.0% | |
| TGATTCAAGTGTAGAGACTG+TGG | + | chr8.3:56497190-56497209 | None:intergenic | 40.0% | |
| TGATTCATCAAGGAGTAGGA+AGG | - | chr8.3:56497350-56497369 | MS.gene78867:CDS | 40.0% | |
| TTAGTAGATCCGGAAGTCTT+TGG | + | chr8.3:56496323-56496342 | None:intergenic | 40.0% | |
| TTCAATCTCATCAGGTGGAA+TGG | - | chr8.3:56497624-56497643 | MS.gene78867:CDS | 40.0% | |
| TTCCGGCATACGAAAATACA+AGG | - | chr8.3:56497482-56497501 | MS.gene78867:CDS | 40.0% | |
| TTGGAGTTTAGATTGCTCGT+CGG | - | chr8.3:56497885-56497904 | MS.gene78867:CDS | 40.0% | |
| ! | GACCTTGTATTTTCGTATGC+CGG | + | chr8.3:56497487-56497506 | None:intergenic | 40.0% |
| ! | GACTGTGGATTCCTATTTTC+AGG | + | chr8.3:56497175-56497194 | None:intergenic | 40.0% |
| ! | TGGTTGTGATAACGACAGAA+GGG | - | chr8.3:56496583-56496602 | MS.gene78867:CDS | 40.0% |
| !! | CTTTTGAAGATCACCTTCAC+AGG | + | chr8.3:56496966-56496985 | None:intergenic | 40.0% |
| !! | TCACATGTGGATTGGAATAC+CGG | - | chr8.3:56497826-56497845 | MS.gene78867:CDS | 40.0% |
| AAAATCCAAGTCGAAGGCGA+AGG | - | chr8.3:56496271-56496290 | MS.gene78867:CDS | 45.0% | |
| AAGCCATACATCACCTGATC+TGG | + | chr8.3:56497914-56497933 | None:intergenic | 45.0% | |
| AAGGTGGAACTGTAAGTGCA+GGG | + | chr8.3:56497750-56497769 | None:intergenic | 45.0% | |
| ACTACCAACCTTGTAAGCGA+TGG | - | chr8.3:56496842-56496861 | MS.gene78867:CDS | 45.0% | |
| ACTAGATGTTCCGGAAGGTA+TGG | + | chr8.3:56497446-56497465 | None:intergenic | 45.0% | |
| AGATCAGGTGATGTATGGCT+TGG | - | chr8.3:56497913-56497932 | MS.gene78867:CDS | 45.0% | |
| AGATCCGACTGAAGAATGAG+AGG | - | chr8.3:56496609-56496628 | MS.gene78867:CDS | 45.0% | |
| ATACGGTGACATTGCTTGCA+TGG | + | chr8.3:56497284-56497303 | None:intergenic | 45.0% | |
| ATGACTGGATCGCGAAATGT+TGG | - | chr8.3:56497988-56498007 | MS.gene78867:CDS | 45.0% | |
| CATCCAGATCAGGTGATGTA+TGG | - | chr8.3:56497908-56497927 | MS.gene78867:CDS | 45.0% | |
| CATTCTTCCGTCGTTCCTAA+AGG | + | chr8.3:56497332-56497351 | None:intergenic | 45.0% | |
| CTTCTGTCGTTATCACAACC+AGG | + | chr8.3:56496584-56496603 | None:intergenic | 45.0% | |
| GCTTCCTCTCATTCTTCAGT+CGG | + | chr8.3:56496616-56496635 | None:intergenic | 45.0% | |
| GGGAGGTTTCTATAAACCGA+TGG | - | chr8.3:56497645-56497664 | MS.gene78867:CDS | 45.0% | |
| GTGCGATCTCGAAACATCAT+TGG | - | chr8.3:56496370-56496389 | MS.gene78867:CDS | 45.0% | |
| TACCAACTAGATGTTCCGGA+AGG | + | chr8.3:56497451-56497470 | None:intergenic | 45.0% | |
| TACCTTCCGGAACATCTAGT+TGG | - | chr8.3:56497446-56497465 | MS.gene78867:CDS | 45.0% | |
| TGCAAACTCATCTACTCGGT+TGG | - | chr8.3:56496550-56496569 | MS.gene78867:CDS | 45.0% | |
| TTACAGTTCCACCTTCCCTT+GGG | - | chr8.3:56497755-56497774 | MS.gene78867:CDS | 45.0% | |
| TTGCGGTCATCAGAATCCAT+CGG | - | chr8.3:56497783-56497802 | MS.gene78867:CDS | 45.0% | |
| ! | ATTGGACCTCACCTTTTGCT+GGG | - | chr8.3:56498049-56498068 | MS.gene78867:CDS | 45.0% |
| ! | CTGGTTGTGATAACGACAGA+AGG | - | chr8.3:56496582-56496601 | MS.gene78867:CDS | 45.0% |
| ! | TGCTGTATTGATACTGACGC+TGG | + | chr8.3:56497088-56497107 | None:intergenic | 45.0% |
| !! | ACATGTGGATTGGAATACCG+GGG | - | chr8.3:56497828-56497847 | MS.gene78867:CDS | 45.0% |
| !! | CACATGTGGATTGGAATACC+GGG | - | chr8.3:56497827-56497846 | MS.gene78867:CDS | 45.0% |
| !! | TGAGAAGGCATTGTAGGTGA+AGG | + | chr8.3:56497682-56497701 | None:intergenic | 45.0% |
| !! | TGAGACTGAGAAGGCATTGT+AGG | + | chr8.3:56497688-56497707 | None:intergenic | 45.0% |
| AAACAACGCCGGGAATAGGA+TGG | - | chr8.3:56497954-56497973 | MS.gene78867:CDS | 50.0% | |
| AATCTGCCGGCCCAAATACA+TGG | + | chr8.3:56497603-56497622 | None:intergenic | 50.0% | |
| AGAACTGGCCATCCTATTCC+CGG | + | chr8.3:56497965-56497984 | None:intergenic | 50.0% | |
| AGAGCAGTTGTTGCCTGTGA+AGG | - | chr8.3:56496950-56496969 | MS.gene78867:CDS | 50.0% | |
| AGGTGGAACTGTAAGTGCAG+GGG | + | chr8.3:56497749-56497768 | None:intergenic | 50.0% | |
| ATCTCATCAGGTGGAATGGG+AGG | - | chr8.3:56497628-56497647 | MS.gene78867:CDS | 50.0% | |
| ATCTGCCGGCCCAAATACAT+GGG | + | chr8.3:56497602-56497621 | None:intergenic | 50.0% | |
| ATGACCGCAAAAGAGCCCAA+GGG | + | chr8.3:56497773-56497792 | None:intergenic | 50.0% | |
| CAGTCTCACCCTCAACATCA+CGG | - | chr8.3:56497700-56497719 | MS.gene78867:CDS | 50.0% | |
| CATCTGCTGGATTGCGAGAT+TGG | - | chr8.3:56498031-56498050 | MS.gene78867:CDS | 50.0% | |
| CGGCAGTTGTTCTGGTGAAT+CGG | - | chr8.3:56496508-56496527 | MS.gene78867:CDS | 50.0% | |
| CTTACAGTTCCACCTTCCCT+TGG | - | chr8.3:56497754-56497773 | MS.gene78867:CDS | 50.0% | |
| GAACTGAATGATCTGGCCGA+TGG | + | chr8.3:56497802-56497821 | None:intergenic | 50.0% | |
| GAAGGTGACGATGCAACCAT+CGG | + | chr8.3:56497664-56497683 | None:intergenic | 50.0% | |
| GAAGGTGGAACTGTAAGTGC+AGG | + | chr8.3:56497751-56497770 | None:intergenic | 50.0% | |
| GAGCTTGAGAAAGTTGCTGC+AGG | + | chr8.3:56497564-56497583 | None:intergenic | 50.0% | |
| GTGCAGAAGTTAGTGGCGAT+GGG | - | chr8.3:56496719-56496738 | MS.gene78867:CDS | 50.0% | |
| TACTCAGACACCGTTCCTTG+AGG | + | chr8.3:56496470-56496489 | None:intergenic | 50.0% | |
| TCAAGGAGTAGGAAGGGAAC+AGG | - | chr8.3:56497357-56497376 | MS.gene78867:CDS | 50.0% | |
| TCGTCGTTGAGAAACAACGC+CGG | - | chr8.3:56497943-56497962 | MS.gene78867:CDS | 50.0% | |
| TGAGAAACAACGCCGGGAAT+AGG | - | chr8.3:56497950-56497969 | MS.gene78867:CDS | 50.0% | |
| TGGATCGCGAAATGTTGGCA+CGG | - | chr8.3:56497993-56498012 | MS.gene78867:CDS | 50.0% | |
| TGTAAGTGCAGGGGAAGATG+CGG | + | chr8.3:56497740-56497759 | None:intergenic | 50.0% | |
| TGTGCAGAAGTTAGTGGCGA+TGG | - | chr8.3:56496718-56496737 | MS.gene78867:CDS | 50.0% | |
| TGTTGAGGGTGAGACTGAGA+AGG | + | chr8.3:56497697-56497716 | None:intergenic | 50.0% | |
| ! | GATTGGACCTCACCTTTTGC+TGG | - | chr8.3:56498048-56498067 | MS.gene78867:CDS | 50.0% |
| !! | CATGTGGATTGGAATACCGG+GGG | - | chr8.3:56497829-56497848 | MS.gene78867:CDS | 50.0% |
| !! | TGTTTGGCATCGGCGAATTG+TGG | + | chr8.3:56497400-56497419 | None:intergenic | 50.0% |
| ACCCTCAACATCACGGCTCA+CGG | - | chr8.3:56497707-56497726 | MS.gene78867:CDS | 55.0% | |
| AGCACCAGAGACAGAGGGAA+AGG | - | chr8.3:56496633-56496652 | MS.gene78867:CDS | 55.0% | |
| CAAAAGAGCCCAAGGGAAGG+TGG | + | chr8.3:56497766-56497785 | None:intergenic | 55.0% | |
| CAAAGCCAACGTTGCTCGCT+CGG | + | chr8.3:56496753-56496772 | None:intergenic | 55.0% | |
| CGTCGTTGAGAAACAACGCC+GGG | - | chr8.3:56497944-56497963 | MS.gene78867:CDS | 55.0% | |
| CTCTCCTTTCCCTCTGTCTC+TGG | + | chr8.3:56496640-56496659 | None:intergenic | 55.0% | |
| GAATTCTTGCACCATGCCCC+CGG | + | chr8.3:56497848-56497867 | None:intergenic | 55.0% | |
| GATGACCGCAAAAGAGCCCA+AGG | + | chr8.3:56497774-56497793 | None:intergenic | 55.0% | |
| GTCCTTCCCAGCAAAAGGTG+AGG | + | chr8.3:56498058-56498077 | None:intergenic | 55.0% | |
| TCCGTGAGCCGTGATGTTGA+GGG | + | chr8.3:56497711-56497730 | None:intergenic | 55.0% | |
| TCGAGATCGCACGCACTAGA+AGG | + | chr8.3:56496362-56496381 | None:intergenic | 55.0% | |
| TTCCGTGAGCCGTGATGTTG+AGG | + | chr8.3:56497712-56497731 | None:intergenic | 55.0% | |
| ! | CCGAGTGCCTTTAGGAACGA+CGG | - | chr8.3:56497322-56497341 | MS.gene78867:CDS | 55.0% |
| ! | CCTTCCCTTGGGCTCTTTTG+CGG | - | chr8.3:56497766-56497785 | MS.gene78867:CDS | 55.0% |
| ! | GACCTCACCTTTTGCTGGGA+AGG | - | chr8.3:56498053-56498072 | MS.gene78867:CDS | 55.0% |
| !! | AGAGGAAGCACCAGAGACAG+AGG | - | chr8.3:56496627-56496646 | MS.gene78867:CDS | 55.0% |
| !! | CCGTCGTTCCTAAAGGCACT+CGG | + | chr8.3:56497325-56497344 | None:intergenic | 55.0% |
| !! | GAGGAAGCACCAGAGACAGA+GGG | - | chr8.3:56496628-56496647 | MS.gene78867:CDS | 55.0% |
| AAGTGCAGGGGAAGATGCGG+CGG | + | chr8.3:56497737-56497756 | None:intergenic | 60.0% | |
| AGGCACAGCCGAGTGCCTTT+AGG | - | chr8.3:56497314-56497333 | MS.gene78867:CDS | 60.0% | |
| CACTACCGAGCGAGCAACGT+TGG | - | chr8.3:56496745-56496764 | MS.gene78867:CDS | 60.0% | |
| CCGCAAAAGAGCCCAAGGGA+AGG | + | chr8.3:56497769-56497788 | None:intergenic | 60.0% | |
| GCGAAATGTTGGCACGGCGA+GGG | - | chr8.3:56497999-56498018 | MS.gene78867:CDS | 60.0% | |
| GGATTGGAATACCGGGGGCA+TGG | - | chr8.3:56497834-56497853 | MS.gene78867:CDS | 60.0% | |
| GTCGAAGGCGAAGGCTGCAA+AGG | - | chr8.3:56496280-56496299 | MS.gene78867:CDS | 60.0% | |
| TGCAGCCTTCGCCTTCGACT+TGG | + | chr8.3:56496279-56496298 | None:intergenic | 60.0% | |
| TGCTCGTCGGCATCCAGATC+AGG | - | chr8.3:56497898-56497917 | MS.gene78867:CDS | 60.0% | |
| CGCGAAATGTTGGCACGGCG+AGG | - | chr8.3:56497998-56498017 | MS.gene78867:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 56496251 | 56498122 | 56496251 | ID=MS.gene78867 |
| chr8.3 | mRNA | 56496251 | 56498122 | 56496251 | ID=MS.gene78867.t1;Parent=MS.gene78867 |
| chr8.3 | exon | 56496251 | 56498122 | 56496251 | ID=MS.gene78867.t1.exon1;Parent=MS.gene78867.t1 |
| chr8.3 | CDS | 56496251 | 56498122 | 56496251 | ID=cds.MS.gene78867.t1;Parent=MS.gene78867.t1 |
| Gene Sequence |
| Protein sequence |
