Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79764.t1 | XP_013444655.1 | 100 | 190 | 0 | 0 | 1 | 190 | 1 | 190 | 3.20E-105 | 391 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79764.t1 | Q84MC7 | 81.1 | 175 | 32 | 1 | 10 | 183 | 12 | 186 | 1.2e-79 | 297.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79764.t1 | G8A086 | 100.0 | 190 | 0 | 0 | 1 | 190 | 1 | 190 | 2.3e-105 | 391.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene79764 | MS.gene31808 | PPI |
| MS.gene79764 | MS.gene057108 | PPI |
| MS.gene79764 | MS.gene32355 | PPI |
| MS.gene79764 | MS.gene046813 | PPI |
| MS.gene79764 | MS.gene06745 | PPI |
| MS.gene79764 | MS.gene84133 | PPI |
| MS.gene79764 | MS.gene057110 | PPI |
| MS.gene79764 | MS.gene013622 | PPI |
| MS.gene79764 | MS.gene057109 | PPI |
| MS.gene79764 | MS.gene06744 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79764.t1 | MTR_8g027805 | 100.000 | 190 | 0 | 0 | 1 | 190 | 1 | 190 | 1.04e-142 | 395 |
| MS.gene79764.t1 | MTR_3g090980 | 75.269 | 186 | 45 | 1 | 3 | 187 | 5 | 190 | 3.08e-103 | 295 |
| MS.gene79764.t1 | MTR_1g028380 | 71.739 | 184 | 52 | 0 | 4 | 187 | 5 | 188 | 1.22e-100 | 288 |
| MS.gene79764.t1 | MTR_3g071740 | 54.777 | 157 | 66 | 3 | 21 | 175 | 69 | 222 | 2.28e-58 | 183 |
| MS.gene79764.t1 | MTR_7g070050 | 55.689 | 167 | 68 | 3 | 18 | 178 | 13 | 179 | 7.85e-57 | 177 |
| MS.gene79764.t1 | MTR_5g083270 | 52.500 | 160 | 70 | 3 | 21 | 177 | 49 | 205 | 9.06e-57 | 178 |
| MS.gene79764.t1 | MTR_4g014460 | 48.447 | 161 | 82 | 1 | 18 | 177 | 49 | 209 | 1.69e-53 | 170 |
| MS.gene79764.t1 | MTR_1g016480 | 46.512 | 172 | 90 | 2 | 4 | 174 | 26 | 196 | 9.98e-53 | 167 |
| MS.gene79764.t1 | MTR_5g030500 | 45.856 | 181 | 90 | 4 | 1 | 175 | 28 | 206 | 1.16e-49 | 160 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79764.t1 | AT1G01360 | 78.689 | 183 | 36 | 2 | 1 | 180 | 1 | 183 | 4.50e-105 | 300 |
| MS.gene79764.t1 | AT5G53160 | 76.923 | 182 | 42 | 0 | 3 | 184 | 4 | 185 | 1.57e-104 | 298 |
| MS.gene79764.t1 | AT4G01026 | 75.568 | 176 | 43 | 0 | 11 | 186 | 16 | 191 | 6.78e-99 | 285 |
| MS.gene79764.t1 | AT4G27920 | 69.189 | 185 | 53 | 2 | 3 | 186 | 2 | 183 | 9.33e-96 | 276 |
| MS.gene79764.t1 | AT5G53160 | 74.783 | 115 | 29 | 0 | 3 | 117 | 4 | 118 | 3.06e-60 | 185 |
| MS.gene79764.t1 | AT5G05440 | 52.761 | 163 | 72 | 3 | 16 | 176 | 43 | 202 | 3.01e-55 | 174 |
| MS.gene79764.t1 | AT2G38310 | 53.939 | 165 | 71 | 3 | 20 | 182 | 41 | 202 | 3.57e-54 | 171 |
| MS.gene79764.t1 | AT2G40330 | 50.000 | 164 | 78 | 3 | 16 | 175 | 46 | 209 | 1.39e-52 | 167 |
| MS.gene79764.t1 | AT4G17870 | 49.080 | 163 | 81 | 1 | 18 | 178 | 17 | 179 | 9.23e-50 | 159 |
| MS.gene79764.t1 | AT2G26040 | 46.835 | 158 | 79 | 3 | 18 | 171 | 22 | 178 | 3.41e-49 | 158 |
| MS.gene79764.t1 | AT1G73000 | 39.560 | 182 | 98 | 3 | 4 | 174 | 24 | 204 | 1.20e-44 | 147 |
| MS.gene79764.t1 | AT5G46790 | 49.405 | 168 | 80 | 2 | 15 | 177 | 41 | 208 | 4.33e-44 | 146 |
| MS.gene79764.t1 | AT5G46790 | 49.405 | 168 | 80 | 2 | 15 | 177 | 41 | 208 | 4.33e-44 | 146 |
| MS.gene79764.t1 | AT5G45860 | 54.362 | 149 | 66 | 2 | 31 | 178 | 10 | 157 | 5.73e-43 | 141 |
| MS.gene79764.t1 | AT5G45870 | 53.378 | 148 | 66 | 2 | 31 | 177 | 10 | 155 | 3.28e-42 | 139 |
| MS.gene79764.t1 | AT4G18620 | 45.570 | 158 | 79 | 1 | 27 | 177 | 5 | 162 | 2.09e-38 | 130 |
Find 47 sgRNAs with CRISPR-Local
Find 85 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACATCACAAACATGATTTA+AGG | 0.199874 | 8.4:-68338134 | MS.gene79764:CDS |
| ATAATACACCTGCTAATAAA+TGG | 0.258954 | 8.4:+68337401 | None:intergenic |
| CTCCGGATGGACAGTGATTA+TGG | 0.295712 | 8.4:+68336750 | None:intergenic |
| GATGATGAGGAACATATTCT+TGG | 0.320325 | 8.4:-68337287 | MS.gene79764:CDS |
| TCGTCCTTCGTGTTCCCTTC+AGG | 0.331294 | 8.4:+68336673 | None:intergenic |
| AGGAACATATTCTTGGTATC+AGG | 0.338682 | 8.4:-68337280 | MS.gene79764:CDS |
| TCTTATGGGTTGATATTGAT+AGG | 0.340161 | 8.4:+68336559 | None:intergenic |
| CTCGGAGAGGATGGCCGTGC+AGG | 0.374882 | 8.4:-68336593 | MS.gene79764:CDS |
| AATATAAACCATTTATTAGC+AGG | 0.415514 | 8.4:-68337409 | MS.gene79764:CDS |
| ATTCTTGGTATCAGGATTGT+TGG | 0.418206 | 8.4:-68337272 | MS.gene79764:CDS |
| GGACGAAACTTGTTACTTTG+TGG | 0.425400 | 8.4:-68336656 | MS.gene79764:CDS |
| CTCTTACACTTCCAATACTA+AGG | 0.431766 | 8.4:+68337369 | None:intergenic |
| AGAGAAGTGAATGTTAAATC+TGG | 0.439454 | 8.4:-68337350 | MS.gene79764:CDS |
| ACATCACAAACATGATTTAA+GGG | 0.442195 | 8.4:-68338133 | MS.gene79764:CDS |
| AAAGTACTAACAAGATGAAC+TGG | 0.454898 | 8.4:+68338069 | None:intergenic |
| TTCCATAATCACTGTCCATC+CGG | 0.456029 | 8.4:-68336752 | MS.gene79764:CDS |
| CTCTCAGTACTTGTTGTAGC+TGG | 0.467121 | 8.4:+68337323 | None:intergenic |
| ACTTTGTGGAGGCGTTGATT+AGG | 0.470355 | 8.4:-68336642 | MS.gene79764:CDS |
| ATGCAAGGTGACCTTAGTAT+TGG | 0.474026 | 8.4:-68337380 | MS.gene79764:CDS |
| TGGGTTGATATTGATAGGAT+CGG | 0.522980 | 8.4:+68336564 | None:intergenic |
| CTTGGTATCAGGATTGTTGG+TGG | 0.526123 | 8.4:-68337269 | MS.gene79764:CDS |
| AGCTGATGTCTCGGAGAGGA+TGG | 0.526503 | 8.4:-68336602 | MS.gene79764:CDS |
| GTCCATCCGGAGGTTATTGA+CGG | 0.527187 | 8.4:-68336739 | MS.gene79764:CDS |
| ATAAATGGTTTATATTTCTG+TGG | 0.528070 | 8.4:+68337416 | None:intergenic |
| GAGGTTATTGACGGAAGACC+AGG | 0.540051 | 8.4:-68336730 | MS.gene79764:CDS |
| TACAACAAGTACTGAGAGGT+TGG | 0.543951 | 8.4:-68337318 | MS.gene79764:CDS |
| TCGGAGAGGATGGCCGTGCA+GGG | 0.544070 | 8.4:-68336592 | MS.gene79764:CDS |
| AGACATCAGCTAAAGAACTT+AGG | 0.546542 | 8.4:+68336614 | None:intergenic |
| GATTCAATCACCATTGTACC+TGG | 0.555628 | 8.4:+68336712 | None:intergenic |
| TTCGTCGTGGACGTACCTGA+AGG | 0.560275 | 8.4:-68336688 | MS.gene79764:CDS |
| ATTAGCAGGTGTATTATGCA+AGG | 0.563774 | 8.4:-68337395 | MS.gene79764:CDS |
| GGTCTTCCGTCAATAACCTC+CGG | 0.572740 | 8.4:+68336733 | None:intergenic |
| AAGTTCTTTAGCTGATGTCT+CGG | 0.584502 | 8.4:-68336611 | MS.gene79764:CDS |
| CGAAACTTGTTACTTTGTGG+AGG | 0.590781 | 8.4:-68336653 | MS.gene79764:CDS |
| GATGTGTTTAACAAGAGCAG+AGG | 0.600623 | 8.4:+68338098 | None:intergenic |
| TCGTCGTGGACGTACCTGAA+GGG | 0.600827 | 8.4:-68336687 | MS.gene79764:CDS |
| TTCCGTCAATAACCTCCGGA+TGG | 0.601457 | 8.4:+68336737 | None:intergenic |
| GTTGGAACAACTTGATGATG+AGG | 0.610978 | 8.4:-68337300 | MS.gene79764:CDS |
| TGACGGAAGACCAGGTACAA+TGG | 0.649685 | 8.4:-68336722 | MS.gene79764:CDS |
| AGGATCGGTTCGACCCTGCA+CGG | 0.651985 | 8.4:+68336579 | None:intergenic |
| CATAATCACTGTCCATCCGG+AGG | 0.668841 | 8.4:-68336749 | MS.gene79764:CDS |
| GGTGATTGAATCATTCGTCG+TGG | 0.681706 | 8.4:-68336701 | MS.gene79764:CDS |
| CAGCTACAACAAGTACTGAG+AGG | 0.700141 | 8.4:-68337322 | MS.gene79764:CDS |
| CTTTAGCTGATGTCTCGGAG+AGG | 0.710726 | 8.4:-68336606 | MS.gene79764:CDS |
| TGGTGGTGATCATAGACTGA+GGG | 0.717983 | 8.4:-68337252 | MS.gene79764:intron |
| TTGGTGGTGATCATAGACTG+AGG | 0.778919 | 8.4:-68337253 | MS.gene79764:CDS |
| CGTACCTGAAGGGAACACGA+AGG | 0.780385 | 8.4:-68336677 | MS.gene79764:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCAAAAAAAAAAAAATCAA+TGG | - | chr8.4:68337749-68337768 | MS.gene79764:intron | 10.0% |
| !!! | ATAGAAAAATATTTTGAATT+TGG | + | chr8.4:68337554-68337573 | None:intergenic | 10.0% |
| !!! | TTTTTACTTATTAATAGAAA+TGG | - | chr8.4:68337855-68337874 | MS.gene79764:intron | 10.0% |
| !! | AAAATACCAAACTTAAAATT+TGG | + | chr8.4:68337724-68337743 | None:intergenic | 15.0% |
| !! | AATGAAGAAATTGTATAATA+TGG | - | chr8.4:68337611-68337630 | MS.gene79764:intron | 15.0% |
| !!! | AAATTTTAAGTTTGGTATTT+TGG | - | chr8.4:68337723-68337742 | MS.gene79764:intron | 15.0% |
| !!! | ATGAAATCATTTTTTTGAAA+AGG | - | chr8.4:68336988-68337007 | MS.gene79764:intron | 15.0% |
| !!! | TGAAATCATTTTTTTGAAAA+GGG | - | chr8.4:68336989-68337008 | MS.gene79764:intron | 15.0% |
| !!! | TTCATTTTTTATAAGAGATT+TGG | - | chr8.4:68337017-68337036 | MS.gene79764:intron | 15.0% |
| !! | AATATAAACCATTTATTAGC+AGG | - | chr8.4:68337344-68337363 | MS.gene79764:CDS | 20.0% |
| !! | TCTTATGTTTATATCTTCAT+AGG | - | chr8.4:68337906-68337925 | MS.gene79764:intron | 20.0% |
| !!! | ATAAATGGTTTATATTTCTG+TGG | + | chr8.4:68337340-68337359 | None:intergenic | 20.0% |
| !!! | ATTTTTTTTAAGGTTGGATT+AGG | - | chr8.4:68337091-68337110 | MS.gene79764:intron | 20.0% |
| !!! | CATAGTCAGAATTTTTTTTA+AGG | - | chr8.4:68337081-68337100 | MS.gene79764:intron | 20.0% |
| !!! | CTTCTTTTAATTTTCTCTTT+TGG | + | chr8.4:68337247-68337266 | None:intergenic | 20.0% |
| !!! | GAAAATTAAAAGAAGTTGAT+TGG | - | chr8.4:68337252-68337271 | MS.gene79764:intron | 20.0% |
| !!! | TTATTTTTTTTGTCTCTTTC+AGG | - | chr8.4:68337285-68337304 | MS.gene79764:CDS | 20.0% |
| !!! | TTTTGAATTTGGAAAAACAA+AGG | + | chr8.4:68337543-68337562 | None:intergenic | 20.0% |
| ! | AACTATACATCTCAAAGAAA+TGG | + | chr8.4:68336885-68336904 | None:intergenic | 25.0% |
| ! | ACATCACAAACATGATTTAA+GGG | - | chr8.4:68336620-68336639 | MS.gene79764:CDS | 25.0% |
| ! | ATAATACACCTGCTAATAAA+TGG | + | chr8.4:68337355-68337374 | None:intergenic | 25.0% |
| ! | GAGAGATTATCTTATAATCT+TGG | - | chr8.4:68337798-68337817 | MS.gene79764:intron | 25.0% |
| ! | TGTCTCACAAACAATAAAAT+TGG | + | chr8.4:68337145-68337164 | None:intergenic | 25.0% |
| !! | TCTAGATTTGTGTTTTATGA+GGG | - | chr8.4:68336907-68336926 | MS.gene79764:intron | 25.0% |
| !! | TTCTAGATTTGTGTTTTATG+AGG | - | chr8.4:68336906-68336925 | MS.gene79764:intron | 25.0% |
| !!! | GTCAGAATTTTTTTTAAGGT+TGG | - | chr8.4:68337085-68337104 | MS.gene79764:intron | 25.0% |
| !!! | TTTTTTGTGTCTGAATTACA+TGG | - | chr8.4:68336795-68336814 | MS.gene79764:intron | 25.0% |
| AAAAAATCAATGGTCACCAA+TGG | - | chr8.4:68337759-68337778 | MS.gene79764:intron | 30.0% | |
| AGAGAAGTGAATGTTAAATC+TGG | - | chr8.4:68337403-68337422 | MS.gene79764:CDS | 30.0% | |
| GACATCACAAACATGATTTA+AGG | - | chr8.4:68336619-68336638 | MS.gene79764:CDS | 30.0% | |
| TACTATGATTGAAATTCACG+CGG | - | chr8.4:68337660-68337679 | MS.gene79764:intron | 30.0% | |
| TTTCAAGATCTTGATTGTCT+TGG | - | chr8.4:68336858-68336877 | MS.gene79764:intron | 30.0% | |
| ! | AAAGTACTAACAAGATGAAC+TGG | + | chr8.4:68336687-68336706 | None:intergenic | 30.0% |
| ! | ATTTGTGTTTTATGAGGGTA+TGG | - | chr8.4:68336912-68336931 | MS.gene79764:intron | 30.0% |
| !!! | CATAAGATGCTAGTTTTGAT+TGG | - | chr8.4:68336956-68336975 | MS.gene79764:intron | 30.0% |
| !!! | TGCTAGTTTTGATTGGTTTA+TGG | - | chr8.4:68336963-68336982 | MS.gene79764:intron | 30.0% |
| !!! | TTTTTTGTCTCTTTCAGGTT+TGG | - | chr8.4:68337290-68337309 | MS.gene79764:CDS | 30.0% |
| AAGTTCTTTAGCTGATGTCT+CGG | - | chr8.4:68338142-68338161 | MS.gene79764:CDS | 35.0% | |
| AGACATCAGCTAAAGAACTT+AGG | + | chr8.4:68338142-68338161 | None:intergenic | 35.0% | |
| AGGAACATATTCTTGGTATC+AGG | - | chr8.4:68337473-68337492 | MS.gene79764:intron | 35.0% | |
| ATCGTTAAACCAAGATCAGA+CGG | - | chr8.4:68337697-68337716 | MS.gene79764:intron | 35.0% | |
| ATTAGCAGGTGTATTATGCA+AGG | - | chr8.4:68337358-68337377 | MS.gene79764:CDS | 35.0% | |
| ATTCTTGGTATCAGGATTGT+TGG | - | chr8.4:68337481-68337500 | MS.gene79764:intron | 35.0% | |
| CTCTTACACTTCCAATACTA+AGG | + | chr8.4:68337387-68337406 | None:intergenic | 35.0% | |
| GATGATGAGGAACATATTCT+TGG | - | chr8.4:68337466-68337485 | MS.gene79764:intron | 35.0% | |
| TTTGTGTCTGAATTACATGG+TGG | - | chr8.4:68336798-68336817 | MS.gene79764:intron | 35.0% | |
| !! | TGGGTTGATATTGATAGGAT+CGG | + | chr8.4:68338192-68338211 | None:intergenic | 35.0% |
| !!! | GACGGTCCAAATTTTAAGTT+TGG | - | chr8.4:68337715-68337734 | MS.gene79764:intron | 35.0% |
| AAATTTGGACCGTCTGATCT+TGG | + | chr8.4:68337709-68337728 | None:intergenic | 40.0% | |
| AGCATCAGTTGTAAGCTGAA+CGG | - | chr8.4:68337939-68337958 | MS.gene79764:intron | 40.0% | |
| ATGCAAGGTGACCTTAGTAT+TGG | - | chr8.4:68337373-68337392 | MS.gene79764:CDS | 40.0% | |
| CATTCACACATTCAGTCCAT+TGG | + | chr8.4:68337778-68337797 | None:intergenic | 40.0% | |
| GATGTGTTTAACAAGAGCAG+AGG | + | chr8.4:68336658-68336677 | None:intergenic | 40.0% | |
| GATTCAATCACCATTGTACC+TGG | + | chr8.4:68338044-68338063 | None:intergenic | 40.0% | |
| TTCCATAATCACTGTCCATC+CGG | - | chr8.4:68338001-68338020 | MS.gene79764:intron | 40.0% | |
| !! | CAATGGACTGAATGTGTGAA+TGG | - | chr8.4:68337776-68337795 | MS.gene79764:intron | 40.0% |
| !! | CGAAACTTGTTACTTTGTGG+AGG | - | chr8.4:68338100-68338119 | MS.gene79764:CDS | 40.0% |
| !! | GGACGAAACTTGTTACTTTG+TGG | - | chr8.4:68338097-68338116 | MS.gene79764:CDS | 40.0% |
| !! | GTTGGAACAACTTGATGATG+AGG | - | chr8.4:68337453-68337472 | MS.gene79764:intron | 40.0% |
| !! | TACAACAAGTACTGAGAGGT+TGG | - | chr8.4:68337435-68337454 | MS.gene79764:CDS | 40.0% |
| CTTGGTATCAGGATTGTTGG+TGG | - | chr8.4:68337484-68337503 | MS.gene79764:intron | 45.0% | |
| GGTGATTGAATCATTCGTCG+TGG | - | chr8.4:68338052-68338071 | MS.gene79764:intron | 45.0% | |
| ! | TGGTGGTGATCATAGACTGA+GGG | - | chr8.4:68337501-68337520 | MS.gene79764:intron | 45.0% |
| !! | ACTTTGTGGAGGCGTTGATT+AGG | - | chr8.4:68338111-68338130 | MS.gene79764:CDS | 45.0% |
| !! | CAGCTACAACAAGTACTGAG+AGG | - | chr8.4:68337431-68337450 | MS.gene79764:CDS | 45.0% |
| !! | CTCTCAGTACTTGTTGTAGC+TGG | + | chr8.4:68337433-68337452 | None:intergenic | 45.0% |
| !! | TTGGTGGTGATCATAGACTG+AGG | - | chr8.4:68337500-68337519 | MS.gene79764:intron | 45.0% |
| !! | TATTAATAAGTAAAAAAATA+TGG | + | chr8.4:68337851-68337870 | None:intergenic | 5.0% |
| AATTCACGCGGTCAGCACAT+CGG | - | chr8.4:68337672-68337691 | MS.gene79764:intron | 50.0% | |
| CATAATCACTGTCCATCCGG+AGG | - | chr8.4:68338004-68338023 | MS.gene79764:intron | 50.0% | |
| CTCCGGATGGACAGTGATTA+TGG | + | chr8.4:68338006-68338025 | None:intergenic | 50.0% | |
| CTTTAGCTGATGTCTCGGAG+AGG | - | chr8.4:68338147-68338166 | MS.gene79764:CDS | 50.0% | |
| GAGGTTATTGACGGAAGACC+AGG | - | chr8.4:68338023-68338042 | MS.gene79764:intron | 50.0% | |
| GGTCTTCCGTCAATAACCTC+CGG | + | chr8.4:68338023-68338042 | None:intergenic | 50.0% | |
| GTCCATCCGGAGGTTATTGA+CGG | - | chr8.4:68338014-68338033 | MS.gene79764:intron | 50.0% | |
| TGACGGAAGACCAGGTACAA+TGG | - | chr8.4:68338031-68338050 | MS.gene79764:intron | 50.0% | |
| TTCCGTCAATAACCTCCGGA+TGG | + | chr8.4:68338019-68338038 | None:intergenic | 50.0% | |
| AGCTGATGTCTCGGAGAGGA+TGG | - | chr8.4:68338151-68338170 | MS.gene79764:CDS | 55.0% | |
| CGTACCTGAAGGGAACACGA+AGG | - | chr8.4:68338076-68338095 | MS.gene79764:intron | 55.0% | |
| TCGTCCTTCGTGTTCCCTTC+AGG | + | chr8.4:68338083-68338102 | None:intergenic | 55.0% | |
| TCGTCGTGGACGTACCTGAA+GGG | - | chr8.4:68338066-68338085 | MS.gene79764:intron | 55.0% | |
| TTCGTCGTGGACGTACCTGA+AGG | - | chr8.4:68338065-68338084 | MS.gene79764:intron | 55.0% | |
| !! | AGGATCGGTTCGACCCTGCA+CGG | + | chr8.4:68338177-68338196 | None:intergenic | 60.0% |
| TCGGAGAGGATGGCCGTGCA+GGG | - | chr8.4:68338161-68338180 | MS.gene79764:CDS | 65.0% | |
| CTCGGAGAGGATGGCCGTGC+AGG | - | chr8.4:68338160-68338179 | MS.gene79764:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 68336561 | 68338214 | 68336561 | ID=MS.gene79764 |
| chr8.4 | mRNA | 68336561 | 68338214 | 68336561 | ID=MS.gene79764.t1;Parent=MS.gene79764 |
| chr8.4 | exon | 68338080 | 68338214 | 68338080 | ID=MS.gene79764.t1.exon1;Parent=MS.gene79764.t1 |
| chr8.4 | CDS | 68338080 | 68338214 | 68338080 | ID=cds.MS.gene79764.t1;Parent=MS.gene79764.t1 |
| chr8.4 | exon | 68337253 | 68337468 | 68337253 | ID=MS.gene79764.t1.exon2;Parent=MS.gene79764.t1 |
| chr8.4 | CDS | 68337253 | 68337468 | 68337253 | ID=cds.MS.gene79764.t1;Parent=MS.gene79764.t1 |
| chr8.4 | exon | 68336561 | 68336782 | 68336561 | ID=MS.gene79764.t1.exon3;Parent=MS.gene79764.t1 |
| chr8.4 | CDS | 68336561 | 68336782 | 68336561 | ID=cds.MS.gene79764.t1;Parent=MS.gene79764.t1 |
| Gene Sequence |
| Protein sequence |
