Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83318.t1 | XP_003619801.1 | 96.3 | 405 | 15 | 0 | 1 | 405 | 16 | 420 | 2.70E-234 | 820.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83318.t1 | P14749 | 72.5 | 367 | 101 | 0 | 38 | 404 | 43 | 409 | 1.2e-166 | 587.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83318.t1 | G7KPQ2 | 96.3 | 405 | 15 | 0 | 1 | 405 | 16 | 420 | 1.9e-234 | 820.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene036942 | MS.gene83318 | PPI |
| MS.gene27500 | MS.gene83318 | PPI |
| MS.gene83318 | MS.gene049391 | PPI |
| MS.gene83318 | MS.gene92764 | PPI |
| MS.gene27501 | MS.gene83318 | PPI |
| MS.gene87684 | MS.gene83318 | PPI |
| MS.gene92763 | MS.gene83318 | PPI |
| MS.gene83318 | MS.gene036941 | PPI |
| MS.gene06516 | MS.gene83318 | PPI |
| MS.gene83318 | MS.gene013419 | PPI |
| MS.gene059347 | MS.gene83318 | PPI |
| MS.gene87685 | MS.gene83318 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83318.t1 | MTR_6g069140 | 96.296 | 405 | 15 | 0 | 1 | 405 | 16 | 420 | 0.0 | 813 |
| MS.gene83318.t1 | MTR_1g077480 | 75.980 | 408 | 93 | 3 | 2 | 404 | 4 | 411 | 0.0 | 645 |
| MS.gene83318.t1 | MTR_6g086625 | 75.495 | 404 | 90 | 2 | 5 | 404 | 7 | 405 | 0.0 | 644 |
| MS.gene83318.t1 | MTR_1g077520 | 73.464 | 407 | 100 | 4 | 1 | 404 | 6 | 407 | 0.0 | 637 |
| MS.gene83318.t1 | MTR_6g086575 | 73.515 | 404 | 97 | 2 | 5 | 404 | 7 | 404 | 0.0 | 625 |
| MS.gene83318.t1 | MTR_7g073650 | 66.038 | 371 | 124 | 2 | 36 | 404 | 36 | 406 | 0.0 | 529 |
| MS.gene83318.t1 | MTR_7g073640 | 64.894 | 376 | 130 | 2 | 31 | 404 | 32 | 407 | 0.0 | 528 |
| MS.gene83318.t1 | MTR_1g077520 | 73.353 | 334 | 81 | 4 | 1 | 331 | 6 | 334 | 0.0 | 522 |
| MS.gene83318.t1 | MTR_3g094160 | 57.583 | 422 | 157 | 6 | 3 | 405 | 8 | 426 | 7.72e-176 | 498 |
| MS.gene83318.t1 | MTR_1g078410 | 51.942 | 206 | 44 | 3 | 5 | 206 | 7 | 161 | 3.30e-62 | 199 |
| MS.gene83318.t1 | MTR_0279s0030 | 54.472 | 123 | 54 | 2 | 284 | 404 | 101 | 223 | 3.11e-40 | 143 |
| MS.gene83318.t1 | MTR_0279s0030 | 54.472 | 123 | 54 | 2 | 284 | 404 | 185 | 307 | 3.63e-39 | 142 |
| MS.gene83318.t1 | MTR_0279s0030 | 54.472 | 123 | 54 | 2 | 284 | 404 | 250 | 372 | 1.37e-38 | 142 |
| MS.gene83318.t1 | MTR_8g089725 | 23.643 | 516 | 265 | 18 | 2 | 402 | 1 | 502 | 1.10e-23 | 103 |
| MS.gene83318.t1 | MTR_8g089735 | 23.450 | 516 | 266 | 18 | 2 | 402 | 1 | 502 | 6.91e-23 | 100 |
| MS.gene83318.t1 | MTR_2g096530 | 26.882 | 372 | 172 | 13 | 34 | 312 | 21 | 385 | 2.55e-22 | 99.8 |
| MS.gene83318.t1 | MTR_3g086580 | 25.187 | 401 | 198 | 13 | 2 | 312 | 1 | 389 | 2.57e-21 | 96.7 |
| MS.gene83318.t1 | MTR_8g089745 | 25.441 | 397 | 197 | 14 | 2 | 313 | 1 | 383 | 6.01e-19 | 89.0 |
| MS.gene83318.t1 | MTR_8g089745 | 25.441 | 397 | 197 | 14 | 2 | 313 | 1 | 383 | 1.16e-18 | 88.6 |
| MS.gene83318.t1 | MTR_8g089740 | 25.424 | 354 | 166 | 12 | 51 | 313 | 33 | 379 | 8.10e-18 | 85.9 |
| MS.gene83318.t1 | MTR_3g094180 | 52.381 | 63 | 27 | 1 | 317 | 376 | 7 | 69 | 4.47e-14 | 68.2 |
| MS.gene83318.t1 | MTR_3g086580 | 28.090 | 178 | 101 | 5 | 161 | 312 | 26 | 202 | 1.12e-12 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83318.t1 | AT5G08370 | 67.089 | 395 | 126 | 2 | 10 | 403 | 1 | 392 | 0.0 | 567 |
| MS.gene83318.t1 | AT5G08370 | 70.492 | 366 | 108 | 0 | 38 | 403 | 1 | 366 | 0.0 | 565 |
| MS.gene83318.t1 | AT5G08380 | 64.324 | 370 | 131 | 1 | 36 | 404 | 39 | 408 | 0.0 | 520 |
| MS.gene83318.t1 | AT3G56310 | 61.458 | 384 | 139 | 4 | 25 | 404 | 51 | 429 | 2.51e-176 | 499 |
| MS.gene83318.t1 | AT3G56310 | 57.812 | 384 | 129 | 5 | 25 | 404 | 51 | 405 | 1.26e-159 | 456 |
| MS.gene83318.t1 | AT5G08380 | 69.424 | 278 | 85 | 0 | 36 | 313 | 39 | 316 | 6.18e-149 | 425 |
| MS.gene83318.t1 | AT3G26380 | 24.069 | 349 | 175 | 11 | 51 | 312 | 42 | 387 | 2.60e-18 | 87.0 |
| MS.gene83318.t1 | AT3G26380 | 24.069 | 349 | 175 | 11 | 51 | 312 | 42 | 387 | 4.60e-18 | 86.7 |
Find 103 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGCAGATCAAAATAATAAA+TGG | 0.165046 | 6.1:+63135962 | MS.gene83318:CDS |
| CATCAGATATCGAAGATAAA+TGG | 0.189576 | 6.1:+63135617 | MS.gene83318:CDS |
| CGCTAATATCACATTGAAAA+TGG | 0.198424 | 6.1:-63134070 | None:intergenic |
| TCGACTGGCCTTGCTGATTT+AGG | 0.210405 | 6.1:+63134228 | MS.gene83318:CDS |
| CAATTGATGCAAGAGATTTA+TGG | 0.254656 | 6.1:+63137182 | MS.gene83318:CDS |
| AACATTCCCTTCAGGAATTA+AGG | 0.256843 | 6.1:+63134844 | MS.gene83318:CDS |
| CACAAATATATACCTTTGTT+TGG | 0.259959 | 6.1:-63135213 | None:intergenic |
| TCTAAACATGGACACTTCTT+TGG | 0.259973 | 6.1:-63131998 | None:intergenic |
| CATAGCAAAGGTCTAAAGTT+AGG | 0.276680 | 6.1:+63134884 | MS.gene83318:CDS |
| AAAATGGTGGCAGGGTTATA+TGG | 0.289408 | 6.1:+63134808 | MS.gene83318:intron |
| ACAAATATATACCTTTGTTT+GGG | 0.294697 | 6.1:-63135212 | None:intergenic |
| GAGCAGAAGACCCGTCAATA+TGG | 0.300538 | 6.1:+63135563 | MS.gene83318:CDS |
| TCCTACCTATATTAATATAT+TGG | 0.302571 | 6.1:-63134254 | None:intergenic |
| CTTGCATCAATTGAAGTTCC+TGG | 0.303321 | 6.1:-63137172 | None:intergenic |
| ATGTCACAACCGATCAATAA+AGG | 0.312881 | 6.1:-63136394 | None:intergenic |
| ACAGGCTAGCAGTCGTCTTA+TGG | 0.315278 | 6.1:+63137092 | MS.gene83318:CDS |
| AATTGATGCAAGAGATTTAT+GGG | 0.316622 | 6.1:+63137183 | MS.gene83318:CDS |
| AAAAGAATGCCAGGATCATT+AGG | 0.318644 | 6.1:+63135021 | MS.gene83318:CDS |
| CAACATATTGAGAATTTAGT+TGG | 0.341487 | 6.1:-63137401 | None:intergenic |
| TGAGAATTTAGTTGGGAGTC+AGG | 0.344244 | 6.1:-63137393 | None:intergenic |
| CTAGTGCCCATATGCTGAAA+TGG | 0.349206 | 6.1:-63136251 | None:intergenic |
| TGAAGGGAATGTTGATGATT+TGG | 0.352050 | 6.1:-63134834 | None:intergenic |
| GGTGAAAAGTAATGATGATT+TGG | 0.363363 | 6.1:+63136584 | MS.gene83318:CDS |
| AAAAGAACCATCCTTGATAA+TGG | 0.369809 | 6.1:+63132030 | MS.gene83318:CDS |
| GGTTACCAATATATTAATAT+AGG | 0.369903 | 6.1:+63134249 | MS.gene83318:CDS |
| CAGCATATGGGCACTAGTTA+AGG | 0.374424 | 6.1:+63136257 | MS.gene83318:CDS |
| ATCGTGCCCATTTCAGCATA+TGG | 0.389467 | 6.1:+63136244 | MS.gene83318:CDS |
| ATTAACTTTCAGATGATTGT+TGG | 0.396129 | 6.1:+63134384 | MS.gene83318:intron |
| TCTTCTACTCTTTATGTGAA+TGG | 0.398939 | 6.1:+63135351 | MS.gene83318:CDS |
| TTAACTTTCAGATGATTGTT+GGG | 0.407630 | 6.1:+63134385 | MS.gene83318:intron |
| CAGGTCCTCTCAGTGATAAC+AGG | 0.409989 | 6.1:+63137074 | MS.gene83318:CDS |
| GGTGAAGCTTTATTACAATC+TGG | 0.410377 | 6.1:+63135320 | MS.gene83318:CDS |
| TGTCACAACCGATCAATAAA+GGG | 0.422258 | 6.1:-63136393 | None:intergenic |
| GCAGACAAACTAGGAATTCA+AGG | 0.430874 | 6.1:+63136555 | MS.gene83318:intron |
| AGCAGAAGACCCGTCAATAT+GGG | 0.433798 | 6.1:+63135564 | MS.gene83318:CDS |
| ATCAGATATCGAAGATAAAT+GGG | 0.434080 | 6.1:+63135618 | MS.gene83318:CDS |
| GAAGATTTAATCAAAGAAAC+AGG | 0.441495 | 6.1:+63134092 | MS.gene83318:CDS |
| AAAGAATGCCAGGATCATTA+GGG | 0.454422 | 6.1:+63135022 | MS.gene83318:CDS |
| TGCAGATCAAAATAATAAAT+GGG | 0.457934 | 6.1:+63135963 | MS.gene83318:CDS |
| TTTCCAACTTCAAGCATGTC+AGG | 0.457946 | 6.1:-63136198 | None:intergenic |
| CCCTTCAGGAATTAAGGCTC+TGG | 0.469284 | 6.1:+63134850 | MS.gene83318:CDS |
| TCACATAAAGAGTAGAAGAT+TGG | 0.471668 | 6.1:-63135347 | None:intergenic |
| AATAAATGGGCTTCTTACGC+TGG | 0.475362 | 6.1:+63135976 | MS.gene83318:CDS |
| TTAGGGATCTATTCTGATGC+AGG | 0.479995 | 6.1:+63134902 | MS.gene83318:CDS |
| GACATGCTTGAAGTTGGAAA+TGG | 0.481080 | 6.1:+63136201 | MS.gene83318:CDS |
| GGAAGAGTGTGGGAAATAGT+TGG | 0.485415 | 6.1:+63135587 | MS.gene83318:CDS |
| AACATATTGAGAATTTAGTT+GGG | 0.485473 | 6.1:-63137400 | None:intergenic |
| GCTGATGCTATGGCGTCGAC+TGG | 0.491636 | 6.1:+63134213 | MS.gene83318:intron |
| AAGCAATAGTAACTGCATCT+TGG | 0.496496 | 6.1:+63137131 | MS.gene83318:CDS |
| ATAGCAAAGGTCTAAAGTTA+GGG | 0.496830 | 6.1:+63134885 | MS.gene83318:CDS |
| TCAACACAATCAAAAGTGTC+AGG | 0.497828 | 6.1:+63137325 | MS.gene83318:CDS |
| TCTTCATGCCCTAATGATCC+TGG | 0.497841 | 6.1:-63135030 | None:intergenic |
| TCATTATACAGCTGATGCTA+TGG | 0.499292 | 6.1:+63134203 | MS.gene83318:intron |
| GATCCTGACATGCTTGAAGT+TGG | 0.506888 | 6.1:+63136195 | MS.gene83318:intron |
| ACCATCCTTGATAATGGACT+TGG | 0.507630 | 6.1:+63132036 | MS.gene83318:CDS |
| TCAAGTTATCCATGATGAAA+GGG | 0.510414 | 6.1:+63131905 | None:intergenic |
| ATATAGGCCCCTTTATTGAT+CGG | 0.512124 | 6.1:+63136385 | MS.gene83318:intron |
| TAGTGCCCATATGCTGAAAT+GGG | 0.512805 | 6.1:-63136250 | None:intergenic |
| AAATCATCAACATTCCCTTC+AGG | 0.513951 | 6.1:+63134836 | MS.gene83318:CDS |
| TTCAAGTTATCCATGATGAA+AGG | 0.516128 | 6.1:+63131904 | None:intergenic |
| CAAAACAAGCCCTTTCATCA+TGG | 0.516523 | 6.1:-63131914 | None:intergenic |
| TCAAATGTGCAGGTTTGGGC+AGG | 0.519784 | 6.1:+63137055 | MS.gene83318:intron |
| TCGTGCCCATTTCAGCATAT+GGG | 0.519845 | 6.1:+63136245 | MS.gene83318:CDS |
| TGGGCTTCTTACGCTGGACC+TGG | 0.520592 | 6.1:+63135982 | MS.gene83318:CDS |
| ACATGCAGTAAAAGAATGCC+AGG | 0.521117 | 6.1:+63135012 | MS.gene83318:CDS |
| CGGTTGTGACATTCGAGCAC+TGG | 0.523840 | 6.1:+63136405 | MS.gene83318:CDS |
| GAAAAGTAATGATGATTTGG+AGG | 0.527532 | 6.1:+63136587 | MS.gene83318:CDS |
| ACTAGGAATTCAAGGGAAGA+AGG | 0.530696 | 6.1:+63136563 | MS.gene83318:CDS |
| GAAGTTATATCAGTAAATCA+AGG | 0.539104 | 6.1:+63136460 | MS.gene83318:CDS |
| TGATTACCATTCCATCCTCC+AGG | 0.545361 | 6.1:-63136000 | None:intergenic |
| CAAATATATACCTTTGTTTG+GGG | 0.554934 | 6.1:-63135211 | None:intergenic |
| TTTAAGTTGCTCTCTAAACA+TGG | 0.556417 | 6.1:-63132010 | None:intergenic |
| AAGTTCCTGGTTCTAGACCT+AGG | 0.557009 | 6.1:-63137159 | None:intergenic |
| TTGCATAATTCAATAGTACA+AGG | 0.557451 | 6.1:-63131942 | None:intergenic |
| GCCAAGTCCATTATCAAGGA+TGG | 0.561387 | 6.1:-63132037 | None:intergenic |
| CTTACGCTGGACCTGGAGGA+TGG | 0.562603 | 6.1:+63135989 | MS.gene83318:CDS |
| TGAACTTAATCGAGACTCAA+AGG | 0.568028 | 6.1:+63134409 | MS.gene83318:CDS |
| TCTGGCCAAGTCCATTATCA+AGG | 0.570863 | 6.1:-63132041 | None:intergenic |
| GCCAGAGCCTTAATTCCTGA+AGG | 0.572791 | 6.1:-63134851 | None:intergenic |
| GCTGGACCTGGAGGATGGAA+TGG | 0.582660 | 6.1:+63135994 | MS.gene83318:CDS |
| AATAAAGCTTCACCCATTCG+TGG | 0.592090 | 6.1:-63135311 | None:intergenic |
| CAGACAAACTAGGAATTCAA+GGG | 0.593373 | 6.1:+63136556 | MS.gene83318:intron |
| AAGCTTTATTACAATCTGGA+AGG | 0.596664 | 6.1:+63135324 | MS.gene83318:CDS |
| GCAGAAGACCCGTCAATATG+GGG | 0.600133 | 6.1:+63135565 | MS.gene83318:CDS |
| ACTGCATCTTGGTCTGACCT+AGG | 0.607439 | 6.1:+63137142 | MS.gene83318:CDS |
| ATATCGAAGATAAATGGGAT+AGG | 0.610528 | 6.1:+63135623 | MS.gene83318:CDS |
| TGTGACATTCGAGCACTGGA+TGG | 0.613501 | 6.1:+63136409 | MS.gene83318:CDS |
| TAGGGATCTATTCTGATGCA+GGG | 0.623766 | 6.1:+63134903 | MS.gene83318:CDS |
| GCTGATTATATACATAGCAA+AGG | 0.633393 | 6.1:+63134872 | MS.gene83318:CDS |
| AAATATATACCTTTGTTTGG+GGG | 0.636660 | 6.1:-63135210 | None:intergenic |
| CCAGAGCCTTAATTCCTGAA+GGG | 0.637058 | 6.1:-63134850 | None:intergenic |
| GCTTCTTACGCTGGACCTGG+AGG | 0.650310 | 6.1:+63135985 | MS.gene83318:CDS |
| ATGCTTGAAGTTGGAAATGG+AGG | 0.653820 | 6.1:+63136204 | MS.gene83318:CDS |
| GTCACAACCGATCAATAAAG+GGG | 0.654251 | 6.1:-63136392 | None:intergenic |
| ATAAAGCTTCACCCATTCGT+GGG | 0.657360 | 6.1:-63135310 | None:intergenic |
| CAGAAGACCCGTCAATATGG+GGG | 0.659362 | 6.1:+63135566 | MS.gene83318:CDS |
| AAAAGATGCTTACCCCATAG+GGG | 0.664575 | 6.1:-63132067 | None:intergenic |
| ATTGGTAACCTAAATCAGCA+AGG | 0.666078 | 6.1:-63134236 | None:intergenic |
| AAAGATGCTTACCCCATAGG+GGG | 0.681113 | 6.1:-63132066 | None:intergenic |
| AGCACTGGATGGCATCACAA+AGG | 0.685037 | 6.1:+63136420 | MS.gene83318:CDS |
| GCTAGCCTGTTATCACTGAG+AGG | 0.696156 | 6.1:-63137079 | None:intergenic |
| TCTGACCTAGGTCTAGAACC+AGG | 0.697864 | 6.1:+63137154 | MS.gene83318:CDS |
| TGATGCAAGAGATTTATGGG+AGG | 0.726599 | 6.1:+63137186 | MS.gene83318:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAGTAAAAAAAAAAAAAAAA+AGG | + | chr6.1:63134610-63134629 | MS.gene83318:intron | 10.0% |
| !! | TATATTATATAAATGCAAAA+TGG | - | chr6.1:63135107-63135126 | None:intergenic | 10.0% |
| !!! | ATTTATTTGTTTACTTATTT+TGG | - | chr6.1:63136099-63136118 | None:intergenic | 10.0% |
| !!! | GTTTTTTTTTTTAGAAATAT+AGG | + | chr6.1:63133325-63133344 | MS.gene83318:intron | 10.0% |
| !!! | TTTTTTTTTTAGAAATATAG+GGG | + | chr6.1:63133327-63133346 | MS.gene83318:intron | 10.0% |
| !! | AATGAAACATCTAATAATTA+TGG | + | chr6.1:63132262-63132281 | MS.gene83318:intron | 15.0% |
| !! | AGTATAATTATCATAGAAAT+TGG | - | chr6.1:63134778-63134797 | None:intergenic | 15.0% |
| !! | ATAAAAAGTAGCATTATTAA+AGG | + | chr6.1:63135850-63135869 | MS.gene83318:intron | 15.0% |
| !! | ATATCAACTAATAACATATT+TGG | + | chr6.1:63133097-63133116 | MS.gene83318:intron | 15.0% |
| !! | ATCAATATGATAGAATAAAT+AGG | - | chr6.1:63136138-63136157 | None:intergenic | 15.0% |
| !! | ATGATTCTATTATAAAATGA+AGG | + | chr6.1:63134721-63134740 | MS.gene83318:intron | 15.0% |
| !! | CTATATTCATATATAATGTA+AGG | + | chr6.1:63135494-63135513 | MS.gene83318:intron | 15.0% |
| !! | TATACTTGACAATTTAAAAA+TGG | + | chr6.1:63134792-63134811 | MS.gene83318:intron | 15.0% |
| !! | TATATATAGAAAATCTTAGT+TGG | + | chr6.1:63133172-63133191 | MS.gene83318:intron | 15.0% |
| !! | TCAATATGATAGAATAAATA+GGG | - | chr6.1:63136137-63136156 | None:intergenic | 15.0% |
| !!! | AAGATATTTTCTTATAAATC+TGG | + | chr6.1:63133487-63133506 | MS.gene83318:intron | 15.0% |
| !!! | AATTGAAAGACATTTATTTT+TGG | + | chr6.1:63135792-63135811 | MS.gene83318:intron | 15.0% |
| !!! | AGATATTTTCTTATAAATCT+GGG | + | chr6.1:63133488-63133507 | MS.gene83318:intron | 15.0% |
| !!! | GAGATATTTTAGTATTTTTA+AGG | - | chr6.1:63133685-63133704 | None:intergenic | 15.0% |
| !!! | GTACTATCTTTAAAAATAAA+TGG | - | chr6.1:63134352-63134371 | None:intergenic | 15.0% |
| !!! | GTGATTATTTTGAATAAAAA+GGG | - | chr6.1:63132557-63132576 | None:intergenic | 15.0% |
| !!! | TGTGATTATTTTGAATAAAA+AGG | - | chr6.1:63132558-63132577 | None:intergenic | 15.0% |
| !!! | TTTATGCATTTTGTAAAAAT+AGG | + | chr6.1:63135285-63135304 | MS.gene83318:intron | 15.0% |
| !!! | TTTTATTTCCATGTTTATTT+AGG | - | chr6.1:63136948-63136967 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTAGAAATATAGG+GGG | + | chr6.1:63133328-63133347 | MS.gene83318:intron | 15.0% |
| !!! | TTTTTTTTTTACTCATTCTA+AGG | - | chr6.1:63134604-63134623 | None:intergenic | 15.0% |
| !! | ACCAATATATTAATATAGGT+AGG | + | chr6.1:63134253-63134272 | MS.gene83318:intron | 20.0% |
| !! | GAAGAAAAAACAAAAAGAAT+GGG | - | chr6.1:63132125-63132144 | None:intergenic | 20.0% |
| !! | GGTTACCAATATATTAATAT+AGG | + | chr6.1:63134249-63134268 | MS.gene83318:CDS | 20.0% |
| !! | GTTCATAGAAAATAAAAAGT+TGG | + | chr6.1:63133226-63133245 | MS.gene83318:intron | 20.0% |
| !! | TAACATTGCAATAATGTATT+TGG | + | chr6.1:63133629-63133648 | MS.gene83318:intron | 20.0% |
| !! | TAATGTAAAAAAAAACCAGA+TGG | + | chr6.1:63134036-63134055 | MS.gene83318:intron | 20.0% |
| !! | TAATTGCATTCTCAAATATA+GGG | + | chr6.1:63135540-63135559 | MS.gene83318:intron | 20.0% |
| !! | TCATAAGATTCTTCAAATAA+TGG | - | chr6.1:63133829-63133848 | None:intergenic | 20.0% |
| !! | TCCTACCTATATTAATATAT+TGG | - | chr6.1:63134257-63134276 | None:intergenic | 20.0% |
| !! | TGAAGAAAAAACAAAAAGAA+TGG | - | chr6.1:63132126-63132145 | None:intergenic | 20.0% |
| !! | TGCAGATCAAAATAATAAAT+GGG | + | chr6.1:63135963-63135982 | MS.gene83318:CDS | 20.0% |
| !! | TTAATTGCATTCTCAAATAT+AGG | + | chr6.1:63135539-63135558 | MS.gene83318:intron | 20.0% |
| !!! | AACGGAAAGATTTTTTAAAT+CGG | + | chr6.1:63133715-63133734 | MS.gene83318:intron | 20.0% |
| !!! | ACAAATATATACCTTTGTTT+GGG | - | chr6.1:63135215-63135234 | None:intergenic | 20.0% |
| !!! | GATATCTTTTTTCTTTAAGA+AGG | - | chr6.1:63133082-63133101 | None:intergenic | 20.0% |
| !!! | GATATTTTCTTATAAATCTG+GGG | + | chr6.1:63133489-63133508 | MS.gene83318:intron | 20.0% |
| !!! | TACTACTATTTTGCATATAT+AGG | + | chr6.1:63136369-63136388 | MS.gene83318:intron | 20.0% |
| ! | AAAAAAAAAAAAAGGAGCCT+AGG | + | chr6.1:63134618-63134637 | MS.gene83318:intron | 25.0% |
| ! | AAACATTGTCTTCTAAATGA+TGG | + | chr6.1:63132726-63132745 | MS.gene83318:intron | 25.0% |
| ! | AACATTGTCTTCTAAATGAT+GGG | + | chr6.1:63132727-63132746 | MS.gene83318:intron | 25.0% |
| ! | AAGATTATGGACATAAGATT+AGG | + | chr6.1:63133199-63133218 | MS.gene83318:intron | 25.0% |
| ! | AATTGATGCAAGAGATTTAT+GGG | + | chr6.1:63137183-63137202 | MS.gene83318:CDS | 25.0% |
| ! | AATTGCATTCTCAAATATAG+GGG | + | chr6.1:63135541-63135560 | MS.gene83318:intron | 25.0% |
| ! | ACTAACCAAAGAAAAGAAAA+AGG | - | chr6.1:63136626-63136645 | None:intergenic | 25.0% |
| ! | ACTAAGTAGAAACTAATCTT+AGG | + | chr6.1:63136982-63137001 | MS.gene83318:intron | 25.0% |
| ! | ACTTGACAATTTAAAAATGG+TGG | + | chr6.1:63134795-63134814 | MS.gene83318:intron | 25.0% |
| ! | ACTTTAATCCAAACATAGTA+TGG | + | chr6.1:63132963-63132982 | MS.gene83318:intron | 25.0% |
| ! | ACTTTCCTAGTTAAAACTTT+CGG | + | chr6.1:63134477-63134496 | MS.gene83318:intron | 25.0% |
| ! | AGTATTCTATTACTACATTG+AGG | - | chr6.1:63132304-63132323 | None:intergenic | 25.0% |
| ! | AGTCAAAAACTCAACATTAT+AGG | - | chr6.1:63137282-63137301 | None:intergenic | 25.0% |
| ! | ATACCATAGTTACATTAATG+AGG | - | chr6.1:63134698-63134717 | None:intergenic | 25.0% |
| ! | ATCAGATATCGAAGATAAAT+GGG | + | chr6.1:63135618-63135637 | MS.gene83318:CDS | 25.0% |
| ! | ATGTCCTAGTGAATATTATT+AGG | - | chr6.1:63136027-63136046 | None:intergenic | 25.0% |
| ! | ATTAACTTTCAGATGATTGT+TGG | + | chr6.1:63134384-63134403 | MS.gene83318:intron | 25.0% |
| ! | ATTATATAAGCTCTTTCTCT+TGG | + | chr6.1:63132340-63132359 | MS.gene83318:intron | 25.0% |
| ! | CAACTAATAACATATTTGGT+TGG | + | chr6.1:63133101-63133120 | MS.gene83318:intron | 25.0% |
| ! | CACAAATATATACCTTTGTT+TGG | - | chr6.1:63135216-63135235 | None:intergenic | 25.0% |
| ! | CTAACCAAAGAAAAGAAAAA+GGG | - | chr6.1:63136625-63136644 | None:intergenic | 25.0% |
| ! | CTATATATAGAGATTCTTGT+TGG | - | chr6.1:63133161-63133180 | None:intergenic | 25.0% |
| ! | CTTCTAATCCTAAATAAACA+TGG | + | chr6.1:63136937-63136956 | MS.gene83318:intron | 25.0% |
| ! | GAAGATTTAATCAAAGAAAC+AGG | + | chr6.1:63134092-63134111 | MS.gene83318:CDS | 25.0% |
| ! | GAAGTTATATCAGTAAATCA+AGG | + | chr6.1:63136460-63136479 | MS.gene83318:CDS | 25.0% |
| ! | GTGCAGATCAAAATAATAAA+TGG | + | chr6.1:63135962-63135981 | MS.gene83318:CDS | 25.0% |
| ! | TAACCAAAGAAAAGAAAAAG+GGG | - | chr6.1:63136624-63136643 | None:intergenic | 25.0% |
| ! | TACTTGATGTGAAAAAAAGT+AGG | - | chr6.1:63133365-63133384 | None:intergenic | 25.0% |
| ! | TATCACATGAATCTAATTTG+AGG | + | chr6.1:63135690-63135709 | MS.gene83318:intron | 25.0% |
| ! | TCATCCTAATAATATTCACT+AGG | + | chr6.1:63136020-63136039 | MS.gene83318:intron | 25.0% |
| ! | TTAACTTTCAGATGATTGTT+GGG | + | chr6.1:63134385-63134404 | MS.gene83318:intron | 25.0% |
| ! | TTGCATAATTCAATAGTACA+AGG | - | chr6.1:63131945-63131964 | None:intergenic | 25.0% |
| ! | TTTCCTCATTAATGTAACTA+TGG | + | chr6.1:63134692-63134711 | MS.gene83318:intron | 25.0% |
| !! | AAATATATACCTTTGTTTGG+GGG | - | chr6.1:63135213-63135232 | None:intergenic | 25.0% |
| !! | AAATTAAGTTGCAGATAACT+CGG | + | chr6.1:63132398-63132417 | MS.gene83318:intron | 25.0% |
| !! | ACAAAACAATTTTCTCTTAG+AGG | - | chr6.1:63136341-63136360 | None:intergenic | 25.0% |
| !! | ACAGAGAAAAAACTTTGAAA+TGG | - | chr6.1:63133920-63133939 | None:intergenic | 25.0% |
| !! | ACATGTGATTTTATCTTCAA+AGG | - | chr6.1:63136816-63136835 | None:intergenic | 25.0% |
| !! | ACCATTGAGTACTTTAAAAA+AGG | + | chr6.1:63134531-63134550 | MS.gene83318:intron | 25.0% |
| !! | CAAACAAAGGTATATATTTG+TGG | + | chr6.1:63135214-63135233 | MS.gene83318:intron | 25.0% |
| !! | CAAATATATACCTTTGTTTG+GGG | - | chr6.1:63135214-63135233 | None:intergenic | 25.0% |
| !! | CATGTGATTTTATCTTCAAA+GGG | - | chr6.1:63136815-63136834 | None:intergenic | 25.0% |
| !! | CCATTGAGTACTTTAAAAAA+GGG | + | chr6.1:63134532-63134551 | MS.gene83318:intron | 25.0% |
| !! | GTGCAAGTATACAATTTTAA+AGG | + | chr6.1:63134743-63134762 | MS.gene83318:intron | 25.0% |
| !! | GTTATCAGTATTAAAAGCAT+TGG | - | chr6.1:63136524-63136543 | None:intergenic | 25.0% |
| !! | TCATTTCTTCATTTTCCATT+TGG | + | chr6.1:63135904-63135923 | MS.gene83318:intron | 25.0% |
| !! | TTTTAATACTGATAACCTTG+TGG | + | chr6.1:63136528-63136547 | MS.gene83318:intron | 25.0% |
| !!! | AATTTTCTTTGTTGCTTTAG+GGG | + | chr6.1:63135144-63135163 | MS.gene83318:intron | 25.0% |
| !!! | CAATTTTCTTTGTTGCTTTA+GGG | + | chr6.1:63135143-63135162 | MS.gene83318:intron | 25.0% |
| !!! | GGTTCAATCACTTTTTAAAT+TGG | - | chr6.1:63133746-63133765 | None:intergenic | 25.0% |
| !!! | TCAATTTTCTTTGTTGCTTT+AGG | + | chr6.1:63135142-63135161 | MS.gene83318:intron | 25.0% |
| !!! | TTTTTTCACATCAAGTAAGA+TGG | + | chr6.1:63133368-63133387 | MS.gene83318:intron | 25.0% |
| AAAACTTGAGTGTAACGATT+TGG | - | chr6.1:63133310-63133329 | None:intergenic | 30.0% | |
| AAAAGAACCATCCTTGATAA+TGG | + | chr6.1:63132030-63132049 | MS.gene83318:CDS | 30.0% | |
| AAAATCACATGTCTTAGTAG+TGG | + | chr6.1:63136824-63136843 | MS.gene83318:intron | 30.0% | |
| AAAGAAAAGAAAAAGGGGAA+AGG | - | chr6.1:63136619-63136638 | None:intergenic | 30.0% | |
| AAAGTCCTTATCATATGAGT+CGG | - | chr6.1:63132939-63132958 | None:intergenic | 30.0% | |
| AAATCACATGTCTTAGTAGT+GGG | + | chr6.1:63136825-63136844 | MS.gene83318:intron | 30.0% | |
| AAATTGGATGTAGTAGGAAT+TGG | - | chr6.1:63132781-63132800 | None:intergenic | 30.0% | |
| AACATAGTATGGTTCATGTT+AGG | + | chr6.1:63132974-63132993 | MS.gene83318:intron | 30.0% | |
| AACATGAACCATACTATGTT+TGG | - | chr6.1:63132974-63132993 | None:intergenic | 30.0% | |
| AATATCTCCACGATAGTTAA+CGG | + | chr6.1:63133697-63133716 | MS.gene83318:intron | 30.0% | |
| AATTCCTACTACATCCAATT+TGG | + | chr6.1:63132780-63132799 | MS.gene83318:intron | 30.0% | |
| AATTGGATGTAGTAGGAATT+GGG | - | chr6.1:63132780-63132799 | None:intergenic | 30.0% | |
| ACAATTTAAAAATGGTGGCA+GGG | + | chr6.1:63134800-63134819 | MS.gene83318:intron | 30.0% | |
| ACGATTAGAAACAGATCATA+TGG | + | chr6.1:63137023-63137042 | MS.gene83318:intron | 30.0% | |
| AGTTGTTGTCTTATAGTTAG+TGG | - | chr6.1:63133054-63133073 | None:intergenic | 30.0% | |
| ATATCGAAGATAAATGGGAT+AGG | + | chr6.1:63135623-63135642 | MS.gene83318:CDS | 30.0% | |
| ATCATGTTTCTCAATGATGA+AGG | + | chr6.1:63135389-63135408 | MS.gene83318:intron | 30.0% | |
| ATGCAAAAACATTTGCTTCA+TGG | + | chr6.1:63135058-63135077 | MS.gene83318:CDS | 30.0% | |
| CAATGAATTCAGACTTTACA+TGG | - | chr6.1:63134132-63134151 | None:intergenic | 30.0% | |
| CAATTGATGCAAGAGATTTA+TGG | + | chr6.1:63137182-63137201 | MS.gene83318:CDS | 30.0% | |
| CATCAGATATCGAAGATAAA+TGG | + | chr6.1:63135617-63135636 | MS.gene83318:CDS | 30.0% | |
| CCTAGGAAGAATATAAGTAT+GGG | + | chr6.1:63134635-63134654 | MS.gene83318:intron | 30.0% | |
| CGATTAGAAACAGATCATAT+GGG | + | chr6.1:63137024-63137043 | MS.gene83318:intron | 30.0% | |
| CGCTAATATCACATTGAAAA+TGG | - | chr6.1:63134073-63134092 | None:intergenic | 30.0% | |
| GAGTATGATAAGTTTCCAAA+TGG | - | chr6.1:63135922-63135941 | None:intergenic | 30.0% | |
| GCTGATTATATACATAGCAA+AGG | + | chr6.1:63134872-63134891 | MS.gene83318:CDS | 30.0% | |
| GGTGAAAAGTAATGATGATT+TGG | + | chr6.1:63136584-63136603 | MS.gene83318:CDS | 30.0% | |
| TACAATTTACAATTCTGTCG+TGG | + | chr6.1:63132467-63132486 | MS.gene83318:intron | 30.0% | |
| TATATCAGTAAATCAAGGCA+GGG | + | chr6.1:63136465-63136484 | MS.gene83318:intron | 30.0% | |
| TCACATAAAGAGTAGAAGAT+TGG | - | chr6.1:63135350-63135369 | None:intergenic | 30.0% | |
| TCTTCTACTCTTTATGTGAA+TGG | + | chr6.1:63135351-63135370 | MS.gene83318:CDS | 30.0% | |
| TGCAAAAACATTTGCTTCAT+GGG | + | chr6.1:63135059-63135078 | MS.gene83318:CDS | 30.0% | |
| TGCAGTTACATGAAAAAATG+AGG | - | chr6.1:63136701-63136720 | None:intergenic | 30.0% | |
| TGTCTTATAGTTAGTGGTTT+AGG | - | chr6.1:63133048-63133067 | None:intergenic | 30.0% | |
| TTATATCAGTAAATCAAGGC+AGG | + | chr6.1:63136464-63136483 | MS.gene83318:intron | 30.0% | |
| TTGAAATGGTCAAGTTCTAT+GGG | - | chr6.1:63133906-63133925 | None:intergenic | 30.0% | |
| TTTCTAATCGTGAGTATCTT+AGG | - | chr6.1:63137014-63137033 | None:intergenic | 30.0% | |
| ! | AGTGATTGCTTGAACATTTT+TGG | + | chr6.1:63132606-63132625 | MS.gene83318:intron | 30.0% |
| ! | ATAGCAAAGGTCTAAAGTTA+GGG | + | chr6.1:63134885-63134904 | MS.gene83318:CDS | 30.0% |
| ! | ATTTTCTTATAAATCTGGGG+AGG | + | chr6.1:63133492-63133511 | MS.gene83318:intron | 30.0% |
| ! | CACAAAAAAGAAGTACATAC+TGG | + | chr6.1:63136769-63136788 | MS.gene83318:intron | 30.0% |
| ! | GAAAAGTAATGATGATTTGG+AGG | + | chr6.1:63136587-63136606 | MS.gene83318:CDS | 30.0% |
| ! | GTGATTGCTTGAACATTTTT+GGG | + | chr6.1:63132607-63132626 | MS.gene83318:intron | 30.0% |
| ! | TACTCAATCTATTTAGAACC+TGG | + | chr6.1:63135728-63135747 | MS.gene83318:intron | 30.0% |
| ! | TGATTGCTTGAACATTTTTG+GGG | + | chr6.1:63132608-63132627 | MS.gene83318:intron | 30.0% |
| ! | TTTCCCCTTTTTCTTTTCTT+TGG | + | chr6.1:63136618-63136637 | MS.gene83318:intron | 30.0% |
| ! | TTTGAAATGGTCAAGTTCTA+TGG | - | chr6.1:63133907-63133926 | None:intergenic | 30.0% |
| ! | TTTTCTTATAAATCTGGGGA+GGG | + | chr6.1:63133493-63133512 | MS.gene83318:intron | 30.0% |
| !! | AAGCTTTATTACAATCTGGA+AGG | + | chr6.1:63135324-63135343 | MS.gene83318:CDS | 30.0% |
| !! | GTTTAAGTTGTGACATGATA+TGG | - | chr6.1:63132188-63132207 | None:intergenic | 30.0% |
| !! | TTTAAGTTGCTCTCTAAACA+TGG | - | chr6.1:63132013-63132032 | None:intergenic | 30.0% |
| !!! | ATGAACCGAAAGTTTTAACT+AGG | - | chr6.1:63134485-63134504 | None:intergenic | 30.0% |
| !!! | CCCTTTTTTAAAGTACTCAA+TGG | - | chr6.1:63134535-63134554 | None:intergenic | 30.0% |
| !!! | CCTCTTTTTCAATTAAACCA+CGG | + | chr6.1:63136647-63136666 | MS.gene83318:intron | 30.0% |
| !!! | GTGGTTTTTAGTTGTCTTTT+GGG | + | chr6.1:63132519-63132538 | MS.gene83318:intron | 30.0% |
| !!! | TTAGTATTTTTAAGGTCGCT+GGG | - | chr6.1:63133677-63133696 | None:intergenic | 30.0% |
| !!! | TTTAGTATTTTTAAGGTCGC+TGG | - | chr6.1:63133678-63133697 | None:intergenic | 30.0% |
| AAAAAACCAGATGGAATAGC+TGG | + | chr6.1:63134045-63134064 | MS.gene83318:intron | 35.0% | |
| AAAAAGATGCTTACCCCATA+GGG | - | chr6.1:63132071-63132090 | None:intergenic | 35.0% | |
| AAAAATAGGTACCCACGAAT+GGG | + | chr6.1:63135299-63135318 | MS.gene83318:intron | 35.0% | |
| AAAAGAATGCCAGGATCATT+AGG | + | chr6.1:63135021-63135040 | MS.gene83318:CDS | 35.0% | |
| AAAGAATGCCAGGATCATTA+GGG | + | chr6.1:63135022-63135041 | MS.gene83318:CDS | 35.0% | |
| AAAGACAACTAAAAACCACG+AGG | - | chr6.1:63132518-63132537 | None:intergenic | 35.0% | |
| AAATCATCAACATTCCCTTC+AGG | + | chr6.1:63134836-63134855 | MS.gene83318:CDS | 35.0% | |
| AACATTCCCTTCAGGAATTA+AGG | + | chr6.1:63134844-63134863 | MS.gene83318:CDS | 35.0% | |
| AAGACTAATCCCTACTTGTA+TGG | + | chr6.1:63136906-63136925 | MS.gene83318:intron | 35.0% | |
| AAGCAATAGTAACTGCATCT+TGG | + | chr6.1:63137131-63137150 | MS.gene83318:CDS | 35.0% | |
| AATCTTTCCGTTAACTATCG+TGG | - | chr6.1:63133707-63133726 | None:intergenic | 35.0% | |
| ACACTTAACTACCATTGAAG+AGG | + | chr6.1:63133786-63133805 | MS.gene83318:intron | 35.0% | |
| AGATCTCAGTCTCAGTTATT+TGG | + | chr6.1:63136166-63136185 | MS.gene83318:intron | 35.0% | |
| AGTCTAGTATCCATACAAGT+AGG | - | chr6.1:63136919-63136938 | None:intergenic | 35.0% | |
| ATAGTATGGTTCATGTTAGG+AGG | + | chr6.1:63132977-63132996 | MS.gene83318:intron | 35.0% | |
| ATATAGGCCCCTTTATTGAT+CGG | + | chr6.1:63136385-63136404 | MS.gene83318:intron | 35.0% | |
| ATGATGTAAATGCTCCCTTA+TGG | + | chr6.1:63132823-63132842 | MS.gene83318:intron | 35.0% | |
| ATGTCACAACCGATCAATAA+AGG | - | chr6.1:63136397-63136416 | None:intergenic | 35.0% | |
| ATGTGAATGGTGAGTCAAAT+TGG | + | chr6.1:63135364-63135383 | MS.gene83318:intron | 35.0% | |
| ATTGGATGTAGTAGGAATTG+GGG | - | chr6.1:63132779-63132798 | None:intergenic | 35.0% | |
| CAGACAAACTAGGAATTCAA+GGG | + | chr6.1:63136556-63136575 | MS.gene83318:intron | 35.0% | |
| CATAGCAACACAAAAGTCTA+AGG | + | chr6.1:63133591-63133610 | MS.gene83318:intron | 35.0% | |
| CCCATACTTATATTCTTCCT+AGG | - | chr6.1:63134638-63134657 | None:intergenic | 35.0% | |
| CCGTGGTTTAATTGAAAAAG+AGG | - | chr6.1:63136650-63136669 | None:intergenic | 35.0% | |
| CTGCACAAGTTATCATACTA+TGG | - | chr6.1:63135948-63135967 | None:intergenic | 35.0% | |
| CTTAGTTGGTTGCAAGATTA+TGG | + | chr6.1:63133186-63133205 | MS.gene83318:intron | 35.0% | |
| GACAATTTAAAAATGGTGGC+AGG | + | chr6.1:63134799-63134818 | MS.gene83318:intron | 35.0% | |
| GCCTAGGAAGAATATAAGTA+TGG | + | chr6.1:63134634-63134653 | MS.gene83318:intron | 35.0% | |
| GCTAGTGCAATAAACAATGA+TGG | - | chr6.1:63133139-63133158 | None:intergenic | 35.0% | |
| GTACTTGAAGAGTGATATCT+TGG | - | chr6.1:63136055-63136074 | None:intergenic | 35.0% | |
| GTCTAGTATCCATACAAGTA+GGG | - | chr6.1:63136918-63136937 | None:intergenic | 35.0% | |
| TAAAAATAGGTACCCACGAA+TGG | + | chr6.1:63135298-63135317 | MS.gene83318:intron | 35.0% | |
| TAGTTCAGTCTAACAAGGAA+TGG | - | chr6.1:63132916-63132935 | None:intergenic | 35.0% | |
| TCATTATACAGCTGATGCTA+TGG | + | chr6.1:63134203-63134222 | MS.gene83318:intron | 35.0% | |
| TCTAAACATGGACACTTCTT+TGG | - | chr6.1:63132001-63132020 | None:intergenic | 35.0% | |
| TGAACTTAATCGAGACTCAA+AGG | + | chr6.1:63134409-63134428 | MS.gene83318:CDS | 35.0% | |
| TGATGGAGAATGTTATTGCA+TGG | + | chr6.1:63132632-63132651 | MS.gene83318:intron | 35.0% | |
| TGCTCATATTCAATAGCTCT+TGG | + | chr6.1:63132147-63132166 | MS.gene83318:intron | 35.0% | |
| TGGATGTTATGAGAGATTAG+AGG | - | chr6.1:63136504-63136523 | None:intergenic | 35.0% | |
| TGTCACAACCGATCAATAAA+GGG | - | chr6.1:63136396-63136415 | None:intergenic | 35.0% | |
| TTTCTTATAAATCTGGGGAG+GGG | + | chr6.1:63133494-63133513 | MS.gene83318:intron | 35.0% | |
| ! | ATTGGTAACCTAAATCAGCA+AGG | - | chr6.1:63134239-63134258 | None:intergenic | 35.0% |
| ! | CATAGCAAAGGTCTAAAGTT+AGG | + | chr6.1:63134884-63134903 | MS.gene83318:CDS | 35.0% |
| ! | GTTGTCTTTTGGGCTATATA+TGG | + | chr6.1:63132529-63132548 | MS.gene83318:intron | 35.0% |
| !! | AACTACCGACTCATATGATA+AGG | + | chr6.1:63132931-63132950 | MS.gene83318:intron | 35.0% |
| !! | GATTGCTTGAACATTTTTGG+GGG | + | chr6.1:63132609-63132628 | MS.gene83318:intron | 35.0% |
| !! | GGTGAAGCTTTATTACAATC+TGG | + | chr6.1:63135320-63135339 | MS.gene83318:CDS | 35.0% |
| !! | TCAACACAATCAAAAGTGTC+AGG | + | chr6.1:63137325-63137344 | MS.gene83318:CDS | 35.0% |
| !! | TGAAGGGAATGTTGATGATT+TGG | - | chr6.1:63134837-63134856 | None:intergenic | 35.0% |
| !! | TGTCTGTTTTGAGCAAAACA+TGG | - | chr6.1:63133408-63133427 | None:intergenic | 35.0% |
| !! | TTGAACCGCTCTAAAAAATG+CGG | + | chr6.1:63133759-63133778 | MS.gene83318:intron | 35.0% |
| !!! | CGTGGTTTTTAGTTGTCTTT+TGG | + | chr6.1:63132518-63132537 | MS.gene83318:intron | 35.0% |
| AAAAGATGCTTACCCCATAG+GGG | - | chr6.1:63132070-63132089 | None:intergenic | 40.0% | |
| AAAATGGTGGCAGGGTTATA+TGG | + | chr6.1:63134808-63134827 | MS.gene83318:intron | 40.0% | |
| AATAAAGCTTCACCCATTCG+TGG | - | chr6.1:63135314-63135333 | None:intergenic | 40.0% | |
| ACAGATCAAATGTGCAGGTT+TGG | + | chr6.1:63137050-63137069 | MS.gene83318:intron | 40.0% | |
| ACATGCAGTAAAAGAATGCC+AGG | + | chr6.1:63135012-63135031 | MS.gene83318:CDS | 40.0% | |
| ACTAGGAATTCAAGGGAAGA+AGG | + | chr6.1:63136563-63136582 | MS.gene83318:CDS | 40.0% | |
| AGTTTGTCTGCAAAACCACA+AGG | - | chr6.1:63136546-63136565 | None:intergenic | 40.0% | |
| ATAAAGCTTCACCCATTCGT+GGG | - | chr6.1:63135313-63135332 | None:intergenic | 40.0% | |
| ATGATGTAACCCCCAAACAA+AGG | + | chr6.1:63135201-63135220 | MS.gene83318:CDS | 40.0% | |
| ATGTAAATGCTCCCTTATGG+TGG | + | chr6.1:63132826-63132845 | MS.gene83318:intron | 40.0% | |
| ATTTGCCTCTCGAAACACAT+AGG | - | chr6.1:63132382-63132401 | None:intergenic | 40.0% | |
| CAGATCAAATGTGCAGGTTT+GGG | + | chr6.1:63137051-63137070 | MS.gene83318:intron | 40.0% | |
| CATGAATCTGACGCAAACAT+TGG | - | chr6.1:63135754-63135773 | None:intergenic | 40.0% | |
| CCACTCATAACTCACCAAAT+TGG | - | chr6.1:63132797-63132816 | None:intergenic | 40.0% | |
| CTAGGTCGGTAACTTTATCA+TGG | - | chr6.1:63136727-63136746 | None:intergenic | 40.0% | |
| CTCACCAAATTGGATGTAGT+AGG | - | chr6.1:63132787-63132806 | None:intergenic | 40.0% | |
| CTTGCATCAATTGAAGTTCC+TGG | - | chr6.1:63137175-63137194 | None:intergenic | 40.0% | |
| GAAAAAGATGCTTACCCCAT+AGG | - | chr6.1:63132072-63132091 | None:intergenic | 40.0% | |
| GACATTTGCACTTCAGAACT+AGG | - | chr6.1:63136745-63136764 | None:intergenic | 40.0% | |
| GCAGACAAACTAGGAATTCA+AGG | + | chr6.1:63136555-63136574 | MS.gene83318:intron | 40.0% | |
| GCAGATAACTCGGTAAAGTT+TGG | + | chr6.1:63132408-63132427 | MS.gene83318:intron | 40.0% | |
| GGATAACAGATCAAATGTGC+AGG | + | chr6.1:63137045-63137064 | MS.gene83318:intron | 40.0% | |
| GTCACAACCGATCAATAAAG+GGG | - | chr6.1:63136395-63136414 | None:intergenic | 40.0% | |
| TAGGGATCTATTCTGATGCA+GGG | + | chr6.1:63134903-63134922 | MS.gene83318:CDS | 40.0% | |
| TAGTGCCCATATGCTGAAAT+GGG | - | chr6.1:63136253-63136272 | None:intergenic | 40.0% | |
| TATATCCTGACTCCCAACTA+AGG | + | chr6.1:63137388-63137407 | MS.gene83318:CDS | 40.0% | |
| TGATGCAAGAGATTTATGGG+AGG | + | chr6.1:63137186-63137205 | MS.gene83318:CDS | 40.0% | |
| TGGAGAATGTTATTGCATGG+AGG | + | chr6.1:63132635-63132654 | MS.gene83318:intron | 40.0% | |
| TTAGGGATCTATTCTGATGC+AGG | + | chr6.1:63134902-63134921 | MS.gene83318:CDS | 40.0% | |
| TTGGATGTAGTAGGAATTGG+GGG | - | chr6.1:63132778-63132797 | None:intergenic | 40.0% | |
| TTTGCACTTCAGAACTAGGT+CGG | - | chr6.1:63136741-63136760 | None:intergenic | 40.0% | |
| ! | AATAAATGGGCTTCTTACGC+TGG | + | chr6.1:63135976-63135995 | MS.gene83318:CDS | 40.0% |
| ! | CCAATTTGGTGAGTTATGAG+TGG | + | chr6.1:63132794-63132813 | MS.gene83318:intron | 40.0% |
| !! | ACCATCCTTGATAATGGACT+TGG | + | chr6.1:63132036-63132055 | MS.gene83318:CDS | 40.0% |
| !! | GGGAGCATTTACATCATCTT+AGG | - | chr6.1:63132820-63132839 | None:intergenic | 40.0% |
| !! | TGTGGTTTTGCAGACAAACT+AGG | + | chr6.1:63136546-63136565 | MS.gene83318:intron | 40.0% |
| !! | TTGAACATTTTTGGGGGTGA+TGG | + | chr6.1:63132615-63132634 | MS.gene83318:intron | 40.0% |
| !!! | TAGCTCCGCATTTTTTAGAG+CGG | - | chr6.1:63133767-63133786 | None:intergenic | 40.0% |
| AAAGATGCTTACCCCATAGG+GGG | - | chr6.1:63132069-63132088 | None:intergenic | 45.0% | |
| AAGGTCGCTGGGAGAAAAAA+TGG | - | chr6.1:63133666-63133685 | None:intergenic | 45.0% | |
| ACACTCTTCCCCCATATTGA+CGG | - | chr6.1:63135577-63135596 | None:intergenic | 45.0% | |
| AGCAGAAGACCCGTCAATAT+GGG | + | chr6.1:63135564-63135583 | MS.gene83318:CDS | 45.0% | |
| ATCGACCTATGTGTTTCGAG+AGG | + | chr6.1:63132374-63132393 | MS.gene83318:intron | 45.0% | |
| ATCGTGCCCATTTCAGCATA+TGG | + | chr6.1:63136244-63136263 | MS.gene83318:CDS | 45.0% | |
| ATGGTTCCAGCTATTCCATC+TGG | - | chr6.1:63134054-63134073 | None:intergenic | 45.0% | |
| CAGCATATGGGCACTAGTTA+AGG | + | chr6.1:63136257-63136276 | MS.gene83318:CDS | 45.0% | |
| CCAGAGCCTTAATTCCTGAA+GGG | - | chr6.1:63134853-63134872 | None:intergenic | 45.0% | |
| CTAGTGCCCATATGCTGAAA+TGG | - | chr6.1:63136254-63136273 | None:intergenic | 45.0% | |
| GCCAAGTCCATTATCAAGGA+TGG | - | chr6.1:63132040-63132059 | None:intergenic | 45.0% | |
| GTAATACAAACATCCCGCGT+TGG | - | chr6.1:63132450-63132469 | None:intergenic | 45.0% | |
| GTCGGTAGTTCAGTCTAACA+AGG | - | chr6.1:63132921-63132940 | None:intergenic | 45.0% | |
| GTTGTCATTCGCCTCTTCAA+TGG | - | chr6.1:63133800-63133819 | None:intergenic | 45.0% | |
| TAAATGCTCCCTTATGGTGG+TGG | + | chr6.1:63132829-63132848 | MS.gene83318:intron | 45.0% | |
| TATGGTTCATGTTAGGAGGC+AGG | + | chr6.1:63132981-63133000 | MS.gene83318:intron | 45.0% | |
| TCGTGCCCATTTCAGCATAT+GGG | + | chr6.1:63136245-63136264 | MS.gene83318:CDS | 45.0% | |
| TCTCTCTTGATCTTCCAACG+CGG | + | chr6.1:63132433-63132452 | MS.gene83318:intron | 45.0% | |
| TCTGGCCAAGTCCATTATCA+AGG | - | chr6.1:63132044-63132063 | None:intergenic | 45.0% | |
| TCTTCATGCCCTAATGATCC+TGG | - | chr6.1:63135033-63135052 | None:intergenic | 45.0% | |
| TGATTACCATTCCATCCTCC+AGG | - | chr6.1:63136003-63136022 | None:intergenic | 45.0% | |
| TGCTGAGAGCAGAGAGTTAA+AGG | + | chr6.1:63137247-63137266 | MS.gene83318:intron | 45.0% | |
| TGGATGTAGTAGGAATTGGG+GGG | - | chr6.1:63132777-63132796 | None:intergenic | 45.0% | |
| ! | GGAAGAGTGTGGGAAATAGT+TGG | + | chr6.1:63135587-63135606 | MS.gene83318:CDS | 45.0% |
| ! | TCAATATGGGGGAAGAGTGT+GGG | + | chr6.1:63135577-63135596 | MS.gene83318:CDS | 45.0% |
| !! | AAGTTCCTGGTTCTAGACCT+AGG | - | chr6.1:63137162-63137181 | None:intergenic | 45.0% |
| !!! | TCGATTGTCGTTTTTCCTCG+TGG | + | chr6.1:63132500-63132519 | MS.gene83318:intron | 45.0% |
| !!! | TTTTTTTTTACATTAATAAT+TGG | - | chr6.1:63134031-63134050 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTAGAAATATA+GGG | + | chr6.1:63133326-63133345 | MS.gene83318:intron | 5.0% |
| AAACCACGGATGAGTCTCTC+AGG | + | chr6.1:63136661-63136680 | MS.gene83318:intron | 50.0% | |
| AATCCTGAGAGACTCATCCG+TGG | - | chr6.1:63136667-63136686 | None:intergenic | 50.0% | |
| ACAGGCTAGCAGTCGTCTTA+TGG | + | chr6.1:63137092-63137111 | MS.gene83318:CDS | 50.0% | |
| ACTGCATCTTGGTCTGACCT+AGG | + | chr6.1:63137142-63137161 | MS.gene83318:CDS | 50.0% | |
| AGACACATGCCACCACCATA+AGG | - | chr6.1:63132841-63132860 | None:intergenic | 50.0% | |
| ATCTGACGCAAACATTGGCC+AGG | - | chr6.1:63135749-63135768 | None:intergenic | 50.0% | |
| ATGTAGTAGGAATTGGGGGG+GGG | - | chr6.1:63132774-63132793 | None:intergenic | 50.0% | |
| CACTCTTCCCCCATATTGAC+GGG | - | chr6.1:63135576-63135595 | None:intergenic | 50.0% | |
| CAGAAGACCCGTCAATATGG+GGG | + | chr6.1:63135566-63135585 | MS.gene83318:CDS | 50.0% | |
| CAGGTCCTCTCAGTGATAAC+AGG | + | chr6.1:63137074-63137093 | MS.gene83318:CDS | 50.0% | |
| CCCTTCAGGAATTAAGGCTC+TGG | + | chr6.1:63134850-63134869 | MS.gene83318:CDS | 50.0% | |
| CTCTCTTGATCTTCCAACGC+GGG | + | chr6.1:63132434-63132453 | MS.gene83318:intron | 50.0% | |
| GACACATGCCACCACCATAA+GGG | - | chr6.1:63132840-63132859 | None:intergenic | 50.0% | |
| GAGCAGAAGACCCGTCAATA+TGG | + | chr6.1:63135563-63135582 | MS.gene83318:CDS | 50.0% | |
| GATGTAGTAGGAATTGGGGG+GGG | - | chr6.1:63132775-63132794 | None:intergenic | 50.0% | |
| GCAGAAGACCCGTCAATATG+GGG | + | chr6.1:63135565-63135584 | MS.gene83318:CDS | 50.0% | |
| GCCAGAGCCTTAATTCCTGA+AGG | - | chr6.1:63134854-63134873 | None:intergenic | 50.0% | |
| GGATGTAGTAGGAATTGGGG+GGG | - | chr6.1:63132776-63132795 | None:intergenic | 50.0% | |
| GTCAATATGGGGGAAGAGTG+TGG | + | chr6.1:63135576-63135595 | MS.gene83318:CDS | 50.0% | |
| GTGATGATAGTCACACCCCT+CGG | + | chr6.1:63133880-63133899 | MS.gene83318:intron | 50.0% | |
| TCAAATGTGCAGGTTTGGGC+AGG | + | chr6.1:63137055-63137074 | MS.gene83318:intron | 50.0% | |
| ! | AGCACTGGATGGCATCACAA+AGG | + | chr6.1:63136420-63136439 | MS.gene83318:CDS | 50.0% |
| ! | GCTAGCCTGTTATCACTGAG+AGG | - | chr6.1:63137082-63137101 | None:intergenic | 50.0% |
| ! | TCTGACCTAGGTCTAGAACC+AGG | + | chr6.1:63137154-63137173 | MS.gene83318:CDS | 50.0% |
| !! | AATGATGGGTTGCACCGTCA+AGG | + | chr6.1:63132741-63132760 | MS.gene83318:intron | 50.0% |
| !! | TCGACTGGCCTTGCTGATTT+AGG | + | chr6.1:63134228-63134247 | MS.gene83318:CDS | 50.0% |
| !! | TGTGACATTCGAGCACTGGA+TGG | + | chr6.1:63136409-63136428 | MS.gene83318:CDS | 50.0% |
| CGGTTGTGACATTCGAGCAC+TGG | + | chr6.1:63136405-63136424 | MS.gene83318:CDS | 55.0% | |
| GGAGGCAGGAGCTACTACTA+TGG | + | chr6.1:63132995-63133014 | MS.gene83318:intron | 55.0% | |
| GGTCAAGTTCTATGGGCCGA+GGG | - | chr6.1:63133899-63133918 | None:intergenic | 55.0% | |
| GTCAAGTTCTATGGGCCGAG+GGG | - | chr6.1:63133898-63133917 | None:intergenic | 55.0% | |
| TGGTCAAGTTCTATGGGCCG+AGG | - | chr6.1:63133900-63133919 | None:intergenic | 55.0% | |
| TGTAGTAGGAATTGGGGGGG+GGG | - | chr6.1:63132773-63132792 | None:intergenic | 55.0% | |
| ACTTGGCCAGACACCCCCTA+TGG | + | chr6.1:63132053-63132072 | MS.gene83318:CDS | 60.0% | |
| CTTACGCTGGACCTGGAGGA+TGG | + | chr6.1:63135989-63136008 | MS.gene83318:CDS | 60.0% | |
| CTTGGCCAGACACCCCCTAT+GGG | + | chr6.1:63132054-63132073 | MS.gene83318:CDS | 60.0% | |
| GCTGGACCTGGAGGATGGAA+TGG | + | chr6.1:63135994-63136013 | MS.gene83318:CDS | 60.0% | |
| GCTTCTTACGCTGGACCTGG+AGG | + | chr6.1:63135985-63136004 | MS.gene83318:CDS | 60.0% | |
| GTAGTAGGAATTGGGGGGGG+GGG | - | chr6.1:63132772-63132791 | None:intergenic | 60.0% | |
| TAGTAGGAATTGGGGGGGGG+GGG | - | chr6.1:63132771-63132790 | None:intergenic | 60.0% | |
| TGGGCTTCTTACGCTGGACC+TGG | + | chr6.1:63135982-63136001 | MS.gene83318:CDS | 60.0% | |
| TTGGCCAGACACCCCCTATG+GGG | + | chr6.1:63132055-63132074 | MS.gene83318:CDS | 60.0% | |
| !! | CTTACCCCATAGGGGGTGTC+TGG | - | chr6.1:63132062-63132081 | None:intergenic | 60.0% |
| !! | GCTGATGCTATGGCGTCGAC+TGG | + | chr6.1:63134213-63134232 | MS.gene83318:intron | 60.0% |
| AGTAGGAATTGGGGGGGGGG+GGG | - | chr6.1:63132770-63132789 | None:intergenic | 65.0% | |
| GTAGGAATTGGGGGGGGGGG+GGG | - | chr6.1:63132769-63132788 | None:intergenic | 70.0% | |
| TAGGAATTGGGGGGGGGGGG+GGG | - | chr6.1:63132768-63132787 | None:intergenic | 70.0% | |
| ! | GGGGGGGGGGGGGACCTTGA+CGG | - | chr6.1:63132758-63132777 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 63131916 | 63137408 | 63131916 | ID=MS.gene83318 |
| chr6.1 | mRNA | 63131916 | 63137408 | 63131916 | ID=MS.gene83318.t1;Parent=MS.gene83318 |
| chr6.1 | exon | 63131916 | 63132076 | 63131916 | ID=MS.gene83318.t1.exon1;Parent=MS.gene83318.t1 |
| chr6.1 | CDS | 63131916 | 63132076 | 63131916 | ID=cds.MS.gene83318.t1;Parent=MS.gene83318.t1 |
| chr6.1 | exon | 63134055 | 63134113 | 63134055 | ID=MS.gene83318.t1.exon2;Parent=MS.gene83318.t1 |
| chr6.1 | CDS | 63134055 | 63134113 | 63134055 | ID=cds.MS.gene83318.t1;Parent=MS.gene83318.t1 |
| chr6.1 | exon | 63134214 | 63134270 | 63134214 | ID=MS.gene83318.t1.exon3;Parent=MS.gene83318.t1 |
| chr6.1 | CDS | 63134214 | 63134270 | 63134214 | ID=cds.MS.gene83318.t1;Parent=MS.gene83318.t1 |
| chr6.1 | exon | 63134396 | 63134430 | 63134396 | ID=MS.gene83318.t1.exon4;Parent=MS.gene83318.t1 |
| chr6.1 | CDS | 63134396 | 63134430 | 63134396 | ID=cds.MS.gene83318.t1;Parent=MS.gene83318.t1 |
| chr6.1 | exon | 63134821 | 63134924 | 63134821 | ID=MS.gene83318.t1.exon5;Parent=MS.gene83318.t1 |
| chr6.1 | CDS | 63134821 | 63134924 | 63134821 | ID=cds.MS.gene83318.t1;Parent=MS.gene83318.t1 |
| chr6.1 | exon | 63135005 | 63135080 | 63135005 | ID=MS.gene83318.t1.exon6;Parent=MS.gene83318.t1 |
| chr6.1 | CDS | 63135005 | 63135080 | 63135005 | ID=cds.MS.gene83318.t1;Parent=MS.gene83318.t1 |
| chr6.1 | exon | 63135164 | 63135222 | 63135164 | ID=MS.gene83318.t1.exon7;Parent=MS.gene83318.t1 |
| chr6.1 | CDS | 63135164 | 63135222 | 63135164 | ID=cds.MS.gene83318.t1;Parent=MS.gene83318.t1 |
| chr6.1 | exon | 63135307 | 63135372 | 63135307 | ID=MS.gene83318.t1.exon8;Parent=MS.gene83318.t1 |
| chr6.1 | CDS | 63135307 | 63135372 | 63135307 | ID=cds.MS.gene83318.t1;Parent=MS.gene83318.t1 |
| chr6.1 | exon | 63135561 | 63135644 | 63135561 | ID=MS.gene83318.t1.exon9;Parent=MS.gene83318.t1 |
| chr6.1 | CDS | 63135561 | 63135644 | 63135561 | ID=cds.MS.gene83318.t1;Parent=MS.gene83318.t1 |
| chr6.1 | exon | 63135951 | 63136015 | 63135951 | ID=MS.gene83318.t1.exon10;Parent=MS.gene83318.t1 |
| chr6.1 | CDS | 63135951 | 63136015 | 63135951 | ID=cds.MS.gene83318.t1;Parent=MS.gene83318.t1 |
| chr6.1 | exon | 63136196 | 63136278 | 63136196 | ID=MS.gene83318.t1.exon11;Parent=MS.gene83318.t1 |
| chr6.1 | CDS | 63136196 | 63136278 | 63136196 | ID=cds.MS.gene83318.t1;Parent=MS.gene83318.t1 |
| chr6.1 | exon | 63136391 | 63136481 | 63136391 | ID=MS.gene83318.t1.exon12;Parent=MS.gene83318.t1 |
| chr6.1 | CDS | 63136391 | 63136481 | 63136391 | ID=cds.MS.gene83318.t1;Parent=MS.gene83318.t1 |
| chr6.1 | exon | 63136559 | 63136608 | 63136559 | ID=MS.gene83318.t1.exon13;Parent=MS.gene83318.t1 |
| chr6.1 | CDS | 63136559 | 63136608 | 63136559 | ID=cds.MS.gene83318.t1;Parent=MS.gene83318.t1 |
| chr6.1 | exon | 63137067 | 63137207 | 63137067 | ID=MS.gene83318.t1.exon14;Parent=MS.gene83318.t1 |
| chr6.1 | CDS | 63137067 | 63137207 | 63137067 | ID=cds.MS.gene83318.t1;Parent=MS.gene83318.t1 |
| chr6.1 | exon | 63137322 | 63137408 | 63137322 | ID=MS.gene83318.t1.exon15;Parent=MS.gene83318.t1 |
| chr6.1 | CDS | 63137322 | 63137408 | 63137322 | ID=cds.MS.gene83318.t1;Parent=MS.gene83318.t1 |
| Gene Sequence |
| Protein sequence |
