AlfalfaGEDB | MS.gene84371

M. sativa cultivar XinJiangDaYe / MS.gene84371

KEGG: K09874
GO: GO:0003674 GO:0005215 GO:0005575 GO:0006810 GO:0008150 GO:0015267 GO:0016020 GO:0022803 GO:0022857 GO:0051179 GO:0051234 GO:0055085 GO:0110165
PFAM: PF00230.23

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene84371.t1	XP_003598246.1	97.6	245	6	0	1	245	1	245	6.00E-118	433.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene84371.t1	P49173	66.7	228	76	0	16	243	33	260	4.9e-84	312.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene84371.t1	G7IYK0	97.6	245	6	0	1	245	1	245	4.4e-118	433.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050076	MS.gene84371	0.802418	5.66E-49	-1.69E-46
MS.gene050444	MS.gene84371	0.812483	4.14E-51	-1.69E-46
MS.gene050505	MS.gene84371	-0.803299	3.72E-49	-1.69E-46
MS.gene051228	MS.gene84371	0.843674	1.21E-58	-1.69E-46
MS.gene051242	MS.gene84371	0.809351	1.98E-50	-1.69E-46
MS.gene051244	MS.gene84371	0.830064	3.62E-55	-1.69E-46
MS.gene051617	MS.gene84371	0.808988	2.36E-50	-1.69E-46
MS.gene051810	MS.gene84371	0.805534	1.27E-49	-1.69E-46
MS.gene052290	MS.gene84371	0.834059	3.73E-56	-1.69E-46
MS.gene052379	MS.gene84371	0.819529	1.11E-52	-1.69E-46
MS.gene052870	MS.gene84371	0.823175	1.60E-53	-1.69E-46
MS.gene052872	MS.gene84371	0.815172	1.06E-51	-1.69E-46
MS.gene053103	MS.gene84371	0.816386	5.68E-52	-1.69E-46
MS.gene053104	MS.gene84371	0.828384	9.26E-55	-1.69E-46
MS.gene053209	MS.gene84371	0.800218	1.60E-48	-1.69E-46
MS.gene055206	MS.gene84371	0.818125	2.31E-52	-1.69E-46
MS.gene055254	MS.gene84371	0.830095	3.56E-55	-1.69E-46
MS.gene056664	MS.gene84371	0.816603	5.08E-52	-1.69E-46
MS.gene056796	MS.gene84371	0.816312	5.90E-52	-1.69E-46
MS.gene056903	MS.gene84371	0.830869	2.30E-55	-1.69E-46
MS.gene057129	MS.gene84371	0.803599	3.23E-49	-1.69E-46
MS.gene057246	MS.gene84371	0.822015	2.97E-53	-1.69E-46
MS.gene058082	MS.gene84371	0.825242	5.22E-54	-1.69E-46
MS.gene058723	MS.gene84371	0.817766	2.78E-52	-1.69E-46
MS.gene058746	MS.gene84371	0.808115	3.63E-50	-1.69E-46
MS.gene058748	MS.gene84371	0.800444	1.44E-48	-1.69E-46
MS.gene058773	MS.gene84371	0.800943	1.14E-48	-1.69E-46
MS.gene059858	MS.gene84371	0.82587	3.70E-54	-1.69E-46
MS.gene059960	MS.gene84371	0.801436	9.01E-49	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene84371.t1	MTR_3g008920	98.106	264	5	0	1	264	1	264	0.0	522
MS.gene84371.t1	MTR_5g079570	75.000	244	59	1	5	248	19	260	9.18e-137	386
MS.gene84371.t1	MTR_4g084880	62.771	231	83	1	16	243	25	255	5.41e-106	308
MS.gene84371.t1	MTR_8g087720	53.279	244	111	2	16	258	28	269	4.10e-86	258
MS.gene84371.t1	MTR_2g017610	54.393	239	106	2	8	243	18	256	6.75e-86	257
MS.gene84371.t1	MTR_2g017570	53.975	239	107	2	8	243	18	256	7.43e-85	254
MS.gene84371.t1	MTR_2g017590	52.301	239	111	2	8	243	16	254	4.88e-83	250
MS.gene84371.t1	MTR_2g017660	48.425	254	125	3	8	258	19	269	1.26e-81	246
MS.gene84371.t1	MTR_8g087710	54.709	223	100	1	22	243	35	257	1.77e-81	246
MS.gene84371.t1	MTR_2g017620	50.628	239	115	2	8	243	4	242	1.87e-79	240
MS.gene84371.t1	MTR_2g017620	50.628	239	115	2	8	243	18	256	2.66e-79	240
MS.gene84371.t1	MTR_7g010650	48.558	208	103	3	26	231	37	242	2.08e-61	195
MS.gene84371.t1	MTR_2g017620	52.432	185	79	1	70	254	2	177	5.52e-61	191
MS.gene84371.t1	MTR_5g063930	46.188	223	98	3	25	235	36	248	1.01e-60	192
MS.gene84371.t1	MTR_4g006730	49.351	231	112	4	8	235	56	284	9.84e-60	191
MS.gene84371.t1	MTR_8g087720	52.299	174	82	1	16	188	28	201	4.53e-57	181
MS.gene84371.t1	MTR_2g104940	48.131	214	107	3	24	235	78	289	7.39e-57	184
MS.gene84371.t1	MTR_4g006630	50.251	199	95	3	39	235	1	197	1.20e-53	173
MS.gene84371.t1	MTR_4g006730	50.251	199	95	3	39	235	1	197	1.77e-53	172
MS.gene84371.t1	MTR_8g087720	53.595	153	70	1	17	168	29	181	8.36e-51	165
MS.gene84371.t1	MTR_1g097840	41.841	239	133	4	1	235	47	283	1.40e-50	168
MS.gene84371.t1	MTR_1g070385	38.117	223	136	2	14	235	50	271	6.32e-41	150
MS.gene84371.t1	MTR_4g006730	43.925	214	103	5	8	218	56	255	5.80e-38	134
MS.gene84371.t1	MTR_7g010650	45.890	146	75	3	26	169	37	180	4.17e-34	122
MS.gene84371.t1	MTR_1g077540	35.169	236	139	6	25	249	20	252	1.85e-30	114
MS.gene84371.t1	MTR_1g097840	39.583	192	110	4	1	188	47	236	2.95e-30	114
MS.gene84371.t1	MTR_2g101370	37.860	243	119	10	22	243	16	247	1.26e-28	109
MS.gene84371.t1	MTR_6g069040	33.898	236	143	6	25	251	20	251	1.22e-27	107
MS.gene84371.t1	MTR_8g013680	36.709	237	124	9	25	243	18	246	7.59e-27	104
MS.gene84371.t1	MTR_5g012810	35.983	239	134	7	25	253	18	247	2.37e-26	103
MS.gene84371.t1	MTR_1g006490	37.327	217	127	7	25	234	18	232	2.55e-26	103
MS.gene84371.t1	MTR_4g006650	48.951	143	60	4	27	167	5	136	1.58e-25	102
MS.gene84371.t1	MTR_1g115405	36.986	219	124	6	25	232	20	235	4.75e-24	97.4
MS.gene84371.t1	MTR_7g103030	35.345	232	125	9	30	243	25	249	1.09e-23	96.7
MS.gene84371.t1	MTR_1g006590	35.484	217	131	7	25	234	18	232	3.05e-23	95.5
MS.gene84371.t1	MTR_4g063090	37.383	214	118	8	31	232	26	235	2.28e-22	93.2
MS.gene84371.t1	MTR_3g118010	28.800	250	159	7	20	251	31	279	1.38e-21	91.7
MS.gene84371.t1	MTR_2g094270	33.862	189	111	5	59	234	84	271	4.22e-21	90.5
MS.gene84371.t1	MTR_7g023350	30.769	234	145	4	25	244	20	250	9.90e-20	85.9
MS.gene84371.t1	MTR_5g010150	31.771	192	118	4	54	232	84	275	2.97e-19	85.5
MS.gene84371.t1	MTR_7g101190	32.308	195	112	5	59	237	82	272	3.38e-19	85.1
MS.gene84371.t1	MTR_1g095070	31.343	201	117	6	67	250	24	220	1.86e-18	82.0
MS.gene84371.t1	MTR_5g082070	28.700	223	140	4	25	231	58	277	3.91e-18	82.4
MS.gene84371.t1	MTR_4g059390	30.208	192	114	5	59	234	82	269	1.17e-17	80.9
MS.gene84371.t1	MTR_8g098375	30.729	192	120	4	54	232	84	275	2.15e-17	80.1
MS.gene84371.t1	MTR_3g070210	29.101	189	115	4	59	231	92	277	1.16e-16	78.2
MS.gene84371.t1	MTR_2g060360	33.758	157	101	3	78	232	77	232	6.01e-16	75.5
MS.gene84371.t1	MTR_4g415300	27.803	223	137	7	30	232	60	278	1.28e-15	75.1
MS.gene84371.t1	MTR_2g094270	33.129	163	98	4	59	211	84	245	1.54e-15	74.7
MS.gene84371.t1	MTR_1g095070	32.026	153	87	4	67	206	24	172	1.76e-13	67.8
MS.gene84371.t1	MTR_3g070210	27.607	163	102	3	59	208	92	251	2.04e-12	65.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene84371.t1	AT5G37820	62.083	240	81	2	16	254	33	263	2.45e-104	305
MS.gene84371.t1	AT5G37820	62.083	240	81	2	16	254	69	299	3.73e-104	305
MS.gene84371.t1	AT5G37810	60.246	244	94	2	16	258	33	274	1.26e-101	298
MS.gene84371.t1	AT4G18910	55.217	230	95	2	22	243	48	277	1.98e-84	254
MS.gene84371.t1	AT1G31885	47.581	248	120	3	22	261	39	284	2.63e-76	234
MS.gene84371.t1	AT4G19030	49.130	230	109	2	22	243	51	280	2.49e-74	229
MS.gene84371.t1	AT1G31885	48.707	232	109	3	38	261	1	230	3.83e-71	219
MS.gene84371.t1	AT2G34390	42.969	256	135	4	13	258	33	287	3.28e-67	210
MS.gene84371.t1	AT2G34390	43.333	240	127	3	27	258	7	245	4.99e-65	203
MS.gene84371.t1	AT4G18910	52.571	175	75	2	22	188	48	222	3.63e-56	180
MS.gene84371.t1	AT1G80760	44.651	215	117	2	22	235	76	289	1.34e-51	171
MS.gene84371.t1	AT4G10380	41.304	230	126	4	22	249	74	296	1.58e-48	163
MS.gene84371.t1	AT4G19030	45.402	174	87	2	22	187	51	224	5.56e-48	159
MS.gene84371.t1	AT2G34390	41.398	186	98	4	13	188	33	217	1.56e-43	147
MS.gene84371.t1	AT4G19030	46.452	155	75	2	22	168	51	205	5.93e-43	146
MS.gene84371.t1	AT2G34390	42.604	169	86	4	13	171	33	200	6.25e-40	138
MS.gene84371.t1	AT3G06100	35.321	218	138	3	25	240	45	261	4.00e-38	135
MS.gene84371.t1	AT3G06100	35.681	213	134	3	30	240	2	213	1.04e-37	132
MS.gene84371.t1	AT3G16240	35.776	232	132	8	25	245	18	243	1.57e-27	106
MS.gene84371.t1	AT3G26520	38.288	222	121	8	25	234	21	238	9.61e-27	104
MS.gene84371.t1	AT1G17810	34.348	230	124	6	25	234	23	245	1.24e-26	104
MS.gene84371.t1	AT1G73190	34.310	239	130	8	25	243	23	254	1.88e-26	104
MS.gene84371.t1	AT2G29870	50.526	95	47	0	142	236	22	116	3.85e-26	100
MS.gene84371.t1	AT2G25810	32.510	243	148	5	25	262	18	249	3.83e-25	100
MS.gene84371.t1	AT4G17340	32.751	229	145	4	25	244	18	246	6.78e-25	99.8
MS.gene84371.t1	AT5G47450	34.703	219	135	4	22	232	15	233	7.14e-25	99.8
MS.gene84371.t1	AT4G01470	33.333	231	116	6	25	232	20	235	3.35e-24	98.2
MS.gene84371.t1	AT2G16850	30.400	250	155	7	20	251	30	278	3.09e-23	95.9
MS.gene84371.t1	AT1G31885	45.122	82	44	1	22	102	39	120	1.32e-22	90.9
MS.gene84371.t1	AT2G36830	34.188	234	136	8	25	243	20	250	5.34e-22	92.0
MS.gene84371.t1	AT3G06100	34.752	141	90	2	101	240	41	180	7.16e-21	87.8
MS.gene84371.t1	AT1G01620	32.474	194	117	5	54	234	12	204	9.79e-20	85.1
MS.gene84371.t1	AT4G35100	32.812	192	115	5	59	237	75	265	1.10e-19	86.3
MS.gene84371.t1	AT4G35100	32.812	192	115	5	59	237	75	265	1.10e-19	86.3
MS.gene84371.t1	AT1G01620	32.474	194	117	5	54	234	84	276	1.93e-19	85.9
MS.gene84371.t1	AT5G60660	32.178	202	116	5	53	237	76	273	1.97e-19	85.9
MS.gene84371.t1	AT3G54820	32.308	195	112	5	59	237	81	271	2.98e-19	85.5
MS.gene84371.t1	AT3G53420	31.343	201	118	5	53	237	76	272	3.27e-19	85.1
MS.gene84371.t1	AT3G53420	31.343	201	118	5	53	237	76	272	3.27e-19	85.1
MS.gene84371.t1	AT4G00430	32.292	192	116	5	54	232	85	275	4.34e-19	84.7
MS.gene84371.t1	AT2G37170	31.343	201	118	5	53	237	74	270	1.26e-18	83.6
MS.gene84371.t1	AT2G37170	29.461	241	140	6	23	237	77	313	1.29e-18	84.3
MS.gene84371.t1	AT2G37180	29.046	241	141	6	23	237	34	270	4.80e-18	82.0
MS.gene84371.t1	AT3G47440	30.137	219	128	7	30	232	27	236	5.09e-18	81.3
MS.gene84371.t1	AT3G61430	31.606	193	114	5	54	231	84	273	6.38e-18	81.6
MS.gene84371.t1	AT3G61430	31.606	193	114	5	54	231	84	273	6.38e-18	81.6
MS.gene84371.t1	AT4G23400	31.034	203	128	4	54	244	85	287	6.79e-18	81.6
MS.gene84371.t1	AT2G39010	29.665	209	129	4	41	237	69	271	1.85e-17	80.5
MS.gene84371.t1	AT2G45960	30.570	193	116	5	54	231	84	273	7.21e-17	78.6
MS.gene84371.t1	AT2G45960	29.940	167	102	4	54	208	84	247	8.53e-13	67.0
MS.gene84371.t1	AT2G45960	29.940	167	102	4	54	208	84	247	9.82e-13	67.4

Find 53 sgRNAs with CRISPR-Local

Find 56 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATATTGTTGGTCCAATTAT+TGG	0.162167	3.1:-4393443	MS.gene84371:CDS
TTCATTGCTGGGCCTGTATC+AGG	0.233946	3.1:-4393536	MS.gene84371:CDS
CCAGCTATGGCTCCAATAAT+TGG	0.252991	3.1:+4393431	None:intergenic
TACATTGTTGCTCAGTTACT+TGG	0.281444	3.1:-4393776	MS.gene84371:CDS
TAAATATGTATTACAATTGC+AGG	0.326908	3.1:+4393482	None:intergenic
TGCTGATCTTAGAAAGTTAT+AGG	0.344398	3.1:+4393400	None:intergenic
ATCACACCCGAATCTTATTT+CGG	0.354797	3.1:-4393713	MS.gene84371:CDS
TTCCAGGGATTTGTATCACT+TGG	0.358323	3.1:-4393919	MS.gene84371:CDS
GCAGGACCAATACTTCTTGC+TGG	0.368004	3.1:+4393500	None:intergenic
TTCATAGATGCTCCTGATAC+AGG	0.392349	3.1:+4393524	None:intergenic
TCCAGGGATTTGTATCACTT+GGG	0.395736	3.1:-4393918	MS.gene84371:CDS
AAGGTAACTGCAGAAGTTAT+TGG	0.400222	3.1:-4394010	MS.gene84371:CDS
CCAATTATTGGAGCCATAGC+TGG	0.416211	3.1:-4393431	MS.gene84371:CDS
ATCTTATTTCGGAACTGTAC+CGG	0.421247	3.1:-4393702	MS.gene84371:CDS
TCTGCTATTGTCTCTGAAGT+TGG	0.422196	3.1:+4393371	None:intergenic
TTTCTAGTGTTTGCTGGTTG+TGG	0.424447	3.1:-4393980	MS.gene84371:CDS
TACAGTTCCGAAATAAGATT+CGG	0.439671	3.1:+4393706	None:intergenic
ACTGTACCGGTCGGATCAAA+TGG	0.444861	3.1:-4393689	MS.gene84371:CDS
TACTCCGTTGGTCATATCTC+TGG	0.449191	3.1:-4393872	MS.gene84371:CDS
TGAAACATTGTTGTTCATCA+AGG	0.453880	3.1:-4394054	MS.gene84371:CDS
CCAGGGATTTGTATCACTTG+GGG	0.463243	3.1:-4393917	MS.gene84371:CDS
TCTGCTGTTAATTCTGAAGT+TGG	0.471889	3.1:+4393344	None:intergenic
ACCCTGCTGTTACAATCACT+TGG	0.473532	3.1:-4393838	MS.gene84371:CDS
ATGAACAACAATGTTTCAAG+AGG	0.474822	3.1:+4394059	None:intergenic
TGTAATAACCTTGATACAAA+AGG	0.477490	3.1:-4394029	MS.gene84371:CDS
AAATGGTCAATCTTTAGTGT+TGG	0.484202	3.1:-4393672	MS.gene84371:CDS
ACAGTTCCGAAATAAGATTC+GGG	0.488105	3.1:+4393707	None:intergenic
TGATAGAGCGGTCGATGACT+CGG	0.499012	3.1:-4393597	MS.gene84371:CDS
GCCCAAGTGATTGTAACAGC+AGG	0.500454	3.1:+4393836	None:intergenic
ATGAATCCAGCAAGAAGTAT+TGG	0.512100	3.1:-4393506	MS.gene84371:CDS
GGATTGTGGATATATATTGT+TGG	0.522254	3.1:-4393455	MS.gene84371:CDS
TACATATTTACAAAGGATTG+TGG	0.529405	3.1:-4393469	MS.gene84371:CDS
ACATTGTTGCTCAGTTACTT+GGG	0.533856	3.1:-4393775	MS.gene84371:CDS
GACTCGGCAAGTATTGCAGT+TGG	0.544686	3.1:-4393581	MS.gene84371:CDS
CAGGGATTTGTATCACTTGG+GGG	0.545559	3.1:-4393916	MS.gene84371:CDS
ATAGGCAAGTGCTCCAGCTA+TGG	0.547527	3.1:+4393418	None:intergenic
CCCCAAGTGATACAAATCCC+TGG	0.552028	3.1:+4393917	None:intergenic
GATTGACCATTTGATCCGAC+CGG	0.564200	3.1:+4393683	None:intergenic
TCAATGGCAATAAAACATCA+AGG	0.580804	3.1:-4394091	MS.gene84371:CDS
ATTGTAATACATATTTACAA+AGG	0.588504	3.1:-4393476	MS.gene84371:CDS
TCCGTTGGTCATATCTCTGG+AGG	0.589588	3.1:-4393869	MS.gene84371:CDS
ACAGTCATGTGTTACTCCGT+TGG	0.600056	3.1:-4393884	MS.gene84371:CDS
CCCTGCTGTTACAATCACTT+GGG	0.603540	3.1:-4393837	MS.gene84371:CDS
ACCTACACAATGTTCTCTGA+AGG	0.609197	3.1:+4393314	None:intergenic
CCCAAGTGATTGTAACAGCA+GGG	0.612416	3.1:+4393837	None:intergenic
TACACAATGTTCTCTGAAGG+TGG	0.619523	3.1:+4393317	None:intergenic
GTAGCAATAAATAAGATACA+TGG	0.620958	3.1:-4393953	MS.gene84371:CDS
TGAACAACAATGTTTCAAGA+GGG	0.621482	3.1:+4394060	None:intergenic
ACCTCCAGAGATATGACCAA+CGG	0.646617	3.1:+4393868	None:intergenic
AACTGAGCAACAATGTACAA+AGG	0.653595	3.1:+4393782	None:intergenic
TATTTCGGAACTGTACCGGT+CGG	0.668392	3.1:-4393698	MS.gene84371:CDS
ACCTTCAGAGAACATTGTGT+AGG	0.675859	3.1:-4393315	None:intergenic
TGTTACTACAGATGATAGAG+CGG	0.715844	3.1:-4393609	MS.gene84371:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTGTAATACATATTTACAA+AGG	-	chr3.1:4393928-4393947	MS.gene84371:CDS	15.0%
!!	TAAATATGTATTACAATTGC+AGG	+	chr3.1:4393925-4393944	None:intergenic	20.0%
!	GTAGCAATAAATAAGATACA+TGG	-	chr3.1:4393451-4393470	MS.gene84371:CDS	25.0%
!	TACATATTTACAAAGGATTG+TGG	-	chr3.1:4393935-4393954	MS.gene84371:CDS	25.0%
!	TATATTGTTGGTCCAATTAT+TGG	-	chr3.1:4393961-4393980	MS.gene84371:CDS	25.0%
!	TGTAATAACCTTGATACAAA+AGG	-	chr3.1:4393375-4393394	MS.gene84371:CDS	25.0%
	AAATGGTCAATCTTTAGTGT+TGG	-	chr3.1:4393732-4393751	MS.gene84371:CDS	30.0%
	ATGAACAACAATGTTTCAAG+AGG	+	chr3.1:4393348-4393367	None:intergenic	30.0%
	GGATTGTGGATATATATTGT+TGG	-	chr3.1:4393949-4393968	MS.gene84371:CDS	30.0%
	TACAGTTCCGAAATAAGATT+CGG	+	chr3.1:4393701-4393720	None:intergenic	30.0%
	TGAACAACAATGTTTCAAGA+GGG	+	chr3.1:4393347-4393366	None:intergenic	30.0%
	TGCTGATCTTAGAAAGTTAT+AGG	+	chr3.1:4394007-4394026	None:intergenic	30.0%
!	ACATTGAATCTTTTCATTGC+TGG	-	chr3.1:4393856-4393875	MS.gene84371:CDS	30.0%
!	CATTGAATCTTTTCATTGCT+GGG	-	chr3.1:4393857-4393876	MS.gene84371:CDS	30.0%
!	TGAAACATTGTTGTTCATCA+AGG	-	chr3.1:4393350-4393369	MS.gene84371:CDS	30.0%
!!	ACATATTTTCTAGTGTTTGC+TGG	-	chr3.1:4393418-4393437	MS.gene84371:CDS	30.0%
	AACTGAGCAACAATGTACAA+AGG	+	chr3.1:4393625-4393644	None:intergenic	35.0%
	AAGGTAACTGCAGAAGTTAT+TGG	-	chr3.1:4393394-4393413	MS.gene84371:CDS	35.0%
	ACAGTTCCGAAATAAGATTC+GGG	+	chr3.1:4393700-4393719	None:intergenic	35.0%
	ACATTGTTGCTCAGTTACTT+GGG	-	chr3.1:4393629-4393648	MS.gene84371:CDS	35.0%
	TACATTGTTGCTCAGTTACT+TGG	-	chr3.1:4393628-4393647	MS.gene84371:CDS	35.0%
	TGTTACTACAGATGATAGAG+CGG	-	chr3.1:4393795-4393814	MS.gene84371:CDS	35.0%
!	ATCACACCCGAATCTTATTT+CGG	-	chr3.1:4393691-4393710	MS.gene84371:CDS	35.0%
!	ATCTTATTTCGGAACTGTAC+CGG	-	chr3.1:4393702-4393721	MS.gene84371:CDS	35.0%
!	ATGAATCCAGCAAGAAGTAT+TGG	-	chr3.1:4393898-4393917	MS.gene84371:CDS	35.0%
!	TGCAGTTACCTTTTGTATCA+AGG	+	chr3.1:4393386-4393405	None:intergenic	35.0%
!!	TCTGCTGTTAATTCTGAAGT+TGG	+	chr3.1:4394063-4394082	None:intergenic	35.0%
	TCCAGGGATTTGTATCACTT+GGG	-	chr3.1:4393486-4393505	MS.gene84371:CDS	40.0%
	TTCATAGATGCTCCTGATAC+AGG	+	chr3.1:4393883-4393902	None:intergenic	40.0%
	TTCCAGGGATTTGTATCACT+TGG	-	chr3.1:4393485-4393504	MS.gene84371:CDS	40.0%
!	TACACAATGTTCTCTGAAGG+TGG	+	chr3.1:4394090-4394109	None:intergenic	40.0%
!	TTTCTAGTGTTTGCTGGTTG+TGG	-	chr3.1:4393424-4393443	MS.gene84371:CDS	40.0%
!!	ATGGCTCTATCACTTTTCCA+GGG	-	chr3.1:4393470-4393489	MS.gene84371:CDS	40.0%
!!	TCTGCTATTGTCTCTGAAGT+TGG	+	chr3.1:4394036-4394055	None:intergenic	40.0%
	ACCCTGCTGTTACAATCACT+TGG	-	chr3.1:4393566-4393585	MS.gene84371:CDS	45.0%
	ACCTCCAGAGATATGACCAA+CGG	+	chr3.1:4393539-4393558	None:intergenic	45.0%
	CAGGGATTTGTATCACTTGG+GGG	-	chr3.1:4393488-4393507	MS.gene84371:CDS	45.0%
	CCAATTATTGGAGCCATAGC+TGG	-	chr3.1:4393973-4393992	MS.gene84371:CDS	45.0%
	CCAGCTATGGCTCCAATAAT+TGG	+	chr3.1:4393976-4393995	None:intergenic	45.0%
	CCAGGGATTTGTATCACTTG+GGG	-	chr3.1:4393487-4393506	MS.gene84371:CDS	45.0%
	CCCAAGTGATTGTAACAGCA+GGG	+	chr3.1:4393570-4393589	None:intergenic	45.0%
	CCCTGCTGTTACAATCACTT+GGG	-	chr3.1:4393567-4393586	MS.gene84371:CDS	45.0%
	GATTGACCATTTGATCCGAC+CGG	+	chr3.1:4393724-4393743	None:intergenic	45.0%
	TACTCCGTTGGTCATATCTC+TGG	-	chr3.1:4393532-4393551	MS.gene84371:CDS	45.0%
!	ACAGTCATGTGTTACTCCGT+TGG	-	chr3.1:4393520-4393539	MS.gene84371:CDS	45.0%
!	TATTTCGGAACTGTACCGGT+CGG	-	chr3.1:4393706-4393725	MS.gene84371:CDS	45.0%
!!	CATGGCTCTATCACTTTTCC+AGG	-	chr3.1:4393469-4393488	MS.gene84371:CDS	45.0%
	ATAGGCAAGTGCTCCAGCTA+TGG	+	chr3.1:4393989-4394008	None:intergenic	50.0%
	CCCCAAGTGATACAAATCCC+TGG	+	chr3.1:4393490-4393509	None:intergenic	50.0%
	GCAGGACCAATACTTCTTGC+TGG	+	chr3.1:4393907-4393926	None:intergenic	50.0%
	GCCCAAGTGATTGTAACAGC+AGG	+	chr3.1:4393571-4393590	None:intergenic	50.0%
	TCCGTTGGTCATATCTCTGG+AGG	-	chr3.1:4393535-4393554	MS.gene84371:CDS	50.0%
	TGATAGAGCGGTCGATGACT+CGG	-	chr3.1:4393807-4393826	MS.gene84371:CDS	50.0%
	TTCATTGCTGGGCCTGTATC+AGG	-	chr3.1:4393868-4393887	MS.gene84371:CDS	50.0%
!	ACTGTACCGGTCGGATCAAA+TGG	-	chr3.1:4393715-4393734	MS.gene84371:CDS	50.0%
!	GACTCGGCAAGTATTGCAGT+TGG	-	chr3.1:4393823-4393842	MS.gene84371:CDS	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.1	gene	4393316	4394110	4393316	ID=MS.gene84371
chr3.1	mRNA	4393316	4394110	4393316	ID=MS.gene84371.t1;Parent=MS.gene84371
chr3.1	exon	4393316	4394110	4393316	ID=MS.gene84371.t1.exon1;Parent=MS.gene84371.t1
chr3.1	CDS	4393316	4394110	4393316	ID=cds.MS.gene84371.t1;Parent=MS.gene84371.t1

Gene Sequence

>MS.gene84371

ATGGCAATAAAACATCAAGGAAACAATTCCCTCTTGAAACATTGTTGTTCATCAAGGCGTGTAATAACCTTGATACAAAAGGTAACTGCAGAAGTTATTGGTACATATTTTCTAGTGTTTGCTGGTTGTGGTGCTGTAGCAATAAATAAGATACATGGCTCTATCACTTTTCCAGGGATTTGTATCACTTGGGGGTTGATTGTAACAGTCATGTGTTACTCCGTTGGTCATATCTCTGGAGGTCTCTTCAACCCTGCTGTTACAATCACTTGGGCTATCTTTCGTCGCATCACGATTAAAGAAGCTCCTTTGTACATTGTTGCTCAGTTACTTGGGTCTACACTTGCAAGTGTAACATTATCTCTAATGTTTGATATCACACCCGAATCTTATTTCGGAACTGTACCGGTCGGATCAAATGGTCAATCTTTAGTGTTGGAAATCATTATCAGTTTTCTCTTAATGTTTGTCATTTCAGCTGTTACTACAGATGATAGAGCGGTCGATGACTCGGCAAGTATTGCAGTTGGAATGACTTTAACATTGAATCTTTTCATTGCTGGGCCTGTATCAGGAGCATCTATGAATCCAGCAAGAAGTATTGGTCCTGCAATTGTAATACATATTTACAAAGGATTGTGGATATATATTGTTGGTCCAATTATTGGAGCCATAGCTGGAGCACTTGCCTATAACTTTCTAAGATCAGCATACAAGCCAACTTCAGAGACAATAGCAGACAAACCAACTTCAGAATTAACAGCAGACAAGCCACCTTCAGAGAACATTGTGTAG

Protein sequence

>MS.gene84371.t1

MAIKHQGNNSLLKHCCSSRRVITLIQKVTAEVIGTYFLVFAGCGAVAINKIHGSITFPGICITWGLIVTVMCYSVGHISGGLFNPAVTITWAIFRRITIKEAPLYIVAQLLGSTLASVTLSLMFDITPESYFGTVPVGSNGQSLVLEIIISFLLMFVISAVTTDDRAVDDSASIAVGMTLTLNLFIAGPVSGASMNPARSIGPAIVIHIYKGLWIYIVGPIIGAIAGALAYNFLRSAYKPTSETIADKPTSELTADKPPSENIV