AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene050076


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050076.t1 MTR_5g064620 97.333 525 12 1 1 523 1 525 0.0 1063
MS.gene050076.t1 MTR_3g099480 75.869 518 120 4 1 514 26 542 0.0 815
MS.gene050076.t1 MTR_5g064610 98.300 353 5 1 537 888 1 353 0.0 711
MS.gene050076.t1 MTR_3g096020 61.247 449 167 5 62 509 144 586 0.0 568
MS.gene050076.t1 MTR_4g019210 50.117 427 201 6 85 509 205 621 2.96e-147 449
MS.gene050076.t1 MTR_5g081690 47.442 430 212 7 84 510 93 511 1.58e-138 423
MS.gene050076.t1 MTR_4g125460 48.140 430 211 7 85 512 62 481 1.43e-135 414
MS.gene050076.t1 MTR_4g082310 48.916 415 198 5 97 509 87 489 3.74e-135 413
MS.gene050076.t1 MTR_4g125460 48.140 430 211 7 85 512 201 620 7.18e-134 414
MS.gene050076.t1 MTR_5g042200 48.113 424 202 6 101 522 79 486 1.47e-133 409
MS.gene050076.t1 MTR_6g016015 50.000 402 190 4 110 508 114 507 5.73e-129 397
MS.gene050076.t1 MTR_4g110030 46.501 443 215 6 69 508 85 508 7.86e-128 395
MS.gene050076.t1 MTR_2g059350 48.449 419 200 6 96 508 99 507 6.19e-127 392
MS.gene050076.t1 MTR_1g031590 41.216 444 219 13 86 509 125 546 7.39e-97 314
MS.gene050076.t1 MTR_3g115220 46.133 375 180 7 86 448 83 447 7.84e-96 312
MS.gene050076.t1 MTR_4g084570 37.148 533 272 15 6 511 53 549 4.92e-95 310
MS.gene050076.t1 MTR_4g100810 42.711 391 211 7 84 465 78 464 7.61e-93 303
MS.gene050076.t1 MTR_5g099010 41.667 432 225 11 86 511 91 501 7.70e-93 305
MS.gene050076.t1 MTR_5g012770 42.750 400 204 10 77 465 84 469 2.02e-90 296
MS.gene050076.t1 MTR_3g005340 37.168 452 250 9 84 518 120 554 2.02e-90 298
MS.gene050076.t1 MTR_5g059260 38.761 436 234 10 97 512 140 562 3.63e-87 290
MS.gene050076.t1 MTR_3g100310 34.341 463 247 8 86 511 75 517 9.39e-86 284
MS.gene050076.t1 MTR_3g086570 34.792 457 241 10 86 511 119 549 8.71e-84 280
MS.gene050076.t1 MTR_5g032100 33.740 492 243 9 69 510 44 502 8.00e-82 273
MS.gene050076.t1 MTR_3g026650 36.933 463 246 13 63 509 124 556 4.76e-80 270
MS.gene050076.t1 MTR_1g102030 35.762 453 236 14 85 511 61 484 1.07e-79 268
MS.gene050076.t1 MTR_4g023030 34.989 443 242 10 85 509 202 616 3.18e-74 256
MS.gene050076.t1 MTR_3g026650 38.095 378 205 7 63 425 124 487 1.56e-70 241
MS.gene050076.t1 MTR_2g016470 34.763 443 238 12 60 452 132 573 1.42e-69 243
MS.gene050076.t1 MTR_4g132590 35.062 482 231 14 86 511 39 494 3.76e-69 238
MS.gene050076.t1 MTR_4g132590 34.855 482 232 14 86 511 138 593 3.79e-68 238
MS.gene050076.t1 MTR_3g086570 35.647 317 175 6 86 377 119 431 3.69e-60 211
MS.gene050076.t1 MTR_1g101990 36.455 299 166 6 217 511 2 280 2.14e-55 194
MS.gene050076.t1 MTR_4g010990 32.153 367 228 10 108 470 72 421 5.33e-51 186
MS.gene050076.t1 MTR_3g092590 35.714 308 168 8 104 388 82 382 6.31e-45 171
MS.gene050076.t1 MTR_4g010990 30.946 349 220 10 126 470 1 332 1.22e-44 165
MS.gene050076.t1 MTR_3g092590 35.604 323 187 9 85 388 62 382 2.20e-44 171
MS.gene050076.t1 MTR_3g026650 35.172 290 159 7 63 337 124 399 5.64e-44 164
MS.gene050076.t1 MTR_7g064210 42.553 188 96 2 205 380 1 188 4.73e-43 162
MS.gene050076.t1 MTR_7g017330 29.012 324 211 8 83 388 68 390 4.49e-38 152
MS.gene050076.t1 MTR_1g007390 33.234 334 186 10 85 388 62 388 1.29e-36 147
MS.gene050076.t1 MTR_1g101985 47.059 102 53 1 85 185 61 162 6.03e-25 103
MS.gene050076.t1 MTR_2g038320 24.444 360 223 10 91 439 72 393 2.32e-22 101
MS.gene050076.t1 MTR_4g008200 23.864 440 264 14 16 439 5 389 2.70e-21 98.2
MS.gene050076.t1 MTR_4g008200 25.000 372 220 11 84 439 10 338 3.90e-21 96.7
MS.gene050076.t1 MTR_4g073410 33.529 170 79 4 644 813 24 159 5.25e-13 70.9
MS.gene050076.t1 MTR_5g022510 32.738 168 75 5 648 813 27 158 2.82e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050076.t1 AT1G22460 70.395 456 134 1 58 513 107 561 0.0 681
MS.gene050076.t1 AT5G64600 55.098 510 212 7 4 512 24 517 0.0 561
MS.gene050076.t1 AT4G09010 68.644 354 101 6 538 888 3 349 1.56e-161 475
MS.gene050076.t1 AT4G09010 68.644 354 101 6 538 888 50 396 7.04e-160 473
MS.gene050076.t1 AT4G09010 76.557 273 64 0 616 888 12 284 3.30e-147 436
MS.gene050076.t1 AT2G37980 50.337 445 205 8 85 527 199 629 2.72e-145 444
MS.gene050076.t1 AT3G54100 45.049 515 262 9 4 516 123 618 5.71e-144 441
MS.gene050076.t1 AT5G01100 45.684 475 240 7 48 521 163 620 4.60e-135 417
MS.gene050076.t1 AT5G35570 48.605 430 209 7 82 509 221 640 1.90e-133 414
MS.gene050076.t1 AT1G14020 49.510 408 192 6 104 509 88 483 7.28e-131 402
MS.gene050076.t1 AT5G15740 48.655 409 199 5 113 518 108 508 3.14e-129 398
MS.gene050076.t1 AT3G02250 48.259 402 197 4 110 508 105 498 9.76e-127 392
MS.gene050076.t1 AT2G03280 49.265 408 192 7 104 508 85 480 1.17e-124 385
MS.gene050076.t1 AT2G03280 46.207 435 192 8 104 508 85 507 1.08e-118 370
MS.gene050076.t1 AT1G76270 41.230 439 232 10 76 509 69 486 1.40e-96 314
MS.gene050076.t1 AT1G20550 41.014 434 234 8 78 509 76 489 2.45e-96 313
MS.gene050076.t1 AT1G38065 39.545 440 222 8 100 509 3 428 1.03e-95 308
MS.gene050076.t1 AT1G38065 40.047 422 221 7 106 509 31 438 4.92e-95 307
MS.gene050076.t1 AT4G38390 40.265 452 240 12 68 511 78 507 6.52e-95 309
MS.gene050076.t1 AT1G38131 39.545 440 222 8 100 509 132 557 5.47e-94 308
MS.gene050076.t1 AT4G16650 45.013 391 202 7 84 465 92 478 3.33e-93 305
MS.gene050076.t1 AT4G16650 45.013 391 202 7 84 465 92 478 3.33e-93 305
MS.gene050076.t1 AT4G24530 35.000 500 241 10 61 511 54 518 8.76e-92 300
MS.gene050076.t1 AT1G35510 37.668 446 240 8 87 514 136 561 2.67e-90 298
MS.gene050076.t1 AT2G01480 38.326 454 225 11 87 516 140 562 5.19e-88 291
MS.gene050076.t1 AT1G04910 37.281 456 252 11 85 525 61 497 3.22e-87 288
MS.gene050076.t1 AT1G14970 38.063 444 224 10 87 510 21 433 3.90e-86 282
MS.gene050076.t1 AT1G14970 38.756 418 219 8 111 510 9 407 5.46e-86 281
MS.gene050076.t1 AT3G26370 34.889 450 238 9 87 511 138 557 2.00e-85 284
MS.gene050076.t1 AT1G14970 35.448 536 276 14 6 510 57 553 2.14e-85 284
MS.gene050076.t1 AT5G63390 38.073 436 241 7 85 510 133 549 2.29e-85 284
MS.gene050076.t1 AT5G65470 34.400 500 248 11 59 511 38 504 5.99e-85 281
MS.gene050076.t1 AT2G01480 40.722 388 195 8 87 454 140 512 2.68e-84 280
MS.gene050076.t1 AT3G07900 38.215 437 246 8 80 509 153 572 1.17e-79 269
MS.gene050076.t1 AT2G44500 37.273 440 235 8 86 509 147 561 5.08e-79 267
MS.gene050076.t1 AT1G29200 35.010 477 236 11 50 465 13 476 1.24e-67 234
MS.gene050076.t1 AT1G29200 35.010 477 236 11 50 465 13 476 1.24e-67 234
MS.gene050076.t1 AT1G29200 35.010 477 236 11 50 465 129 592 1.31e-66 234
MS.gene050076.t1 AT1G29200 36.609 407 196 9 116 465 1 402 8.30e-66 227
MS.gene050076.t1 AT1G62330 33.028 436 228 10 85 466 194 619 2.10e-65 232
MS.gene050076.t1 AT1G11990 36.207 406 223 10 86 466 164 558 2.53e-65 230
MS.gene050076.t1 AT1G11990 32.684 462 236 11 67 466 132 580 2.08e-60 217
MS.gene050076.t1 AT1G52630 29.515 454 273 13 62 512 29 438 1.90e-54 196
MS.gene050076.t1 AT3G03810 36.728 324 180 11 86 388 62 381 3.18e-47 179
MS.gene050076.t1 AT3G03810 36.728 324 180 11 86 388 62 381 3.18e-47 179
MS.gene050076.t1 AT1G52630 29.381 388 235 10 126 512 1 350 1.08e-46 171
MS.gene050076.t1 AT2G44500 37.500 272 146 4 86 342 147 409 5.36e-45 168
MS.gene050076.t1 AT3G30300 31.548 336 205 10 83 397 70 401 7.18e-43 167
MS.gene050076.t1 AT3G30300 31.548 336 205 10 83 397 70 401 7.18e-43 167
MS.gene050076.t1 AT3G26370 37.500 216 121 3 87 292 138 349 9.76e-43 161
MS.gene050076.t1 AT3G21190 25.282 443 265 15 10 439 3 392 1.37e-22 102
MS.gene050076.t1 AT1G51630 23.599 339 213 10 111 439 91 393 1.88e-16 83.2
MS.gene050076.t1 AT4G35970 34.118 170 77 6 644 813 22 156 4.33e-14 73.2
MS.gene050076.t1 AT4G35970 31.020 245 122 10 644 866 22 241 4.97e-14 73.9

Find 213 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGAAAACAAGGGGCTTTC+TGG 0.100143 5.4:-50372287 MS.gene050076:CDS
GTTCTTACAGCTCAAATTAA+AGG 0.166561 5.4:-50373020 MS.gene050076:intron
ACACTTGCTTTCTCCCAAAT+TGG 0.208655 5.4:+50371524 None:intergenic
ATTGCTGCTGGAGAGATTTA+TGG 0.209886 5.4:-50378208 MS.gene050076:CDS
AGGAAAATTCCAACTTCTTT+TGG 0.228061 5.4:+50378268 None:intergenic
AAAGCGGTAGTTTGGATAAA+TGG 0.231509 5.4:+50380559 None:intergenic
AAGAGAAAAGGACCAATTTC+TGG 0.232522 5.4:-50376071 MS.gene050076:CDS
GTATTTATACCCTCTTATTC+TGG 0.234931 5.4:-50376856 MS.gene050076:CDS
GGGCTCAACCAAATGCGTTC+TGG 0.236114 5.4:-50379522 MS.gene050076:CDS
TGACAAATTGAGAGATATTT+CGG 0.236602 5.4:+50375961 None:intergenic
CAGAGGGGAGAATTCCAATT+TGG 0.239430 5.4:-50371538 MS.gene050076:CDS
GACACCAAACAATAACAATT+TGG 0.265364 5.4:-50374468 MS.gene050076:CDS
CGTAAATGCAAGGCAATATA+TGG 0.277219 5.4:+50378538 None:intergenic
AGTTTCTTACCGGTGTAATT+AGG 0.282546 5.4:+50379665 None:intergenic
AGGTAAGGGATTAGCATAAA+AGG 0.286051 5.4:+50376013 None:intergenic
ATGCCCTTTGTTCCAGAAAT+TGG 0.305952 5.4:+50376059 None:intergenic
GGCTCAACCAAATGCGTTCT+GGG 0.307305 5.4:-50379521 MS.gene050076:CDS
AACACTATATACAGCAATTA+AGG 0.308252 5.4:-50372997 MS.gene050076:intron
GACAAATTGAGAGATATTTC+GGG 0.321125 5.4:+50375962 None:intergenic
ATTTAGAGCCAGTGTTAGTA+TGG 0.328852 5.4:+50372817 None:intergenic
TCTCCTCGTATTGAACAAAT+AGG 0.331595 5.4:-50378708 MS.gene050076:CDS
GGATGCAACAGAGACCTTAT+TGG 0.348952 5.4:-50371080 MS.gene050076:CDS
CTGAAGAGCTACGGATTATC+AGG 0.354932 5.4:-50378456 MS.gene050076:intron
GTAGAGAGAACATTTCCTAT+TGG 0.355153 5.4:-50378348 MS.gene050076:intron
TTGCTGCTGGAGAGATTTAT+GGG 0.356965 5.4:-50378207 MS.gene050076:CDS
TCTCTTTGATAAACTAGATC+AGG 0.358796 5.4:-50376630 MS.gene050076:CDS
AAGCGGTAGTTTGGATAAAT+GGG 0.360246 5.4:+50380560 None:intergenic
TGCTTCCTCTATAAAATTCA+AGG 0.360339 5.4:+50372262 None:intergenic
TAAACAACAGCTTACCTATC+TGG 0.364838 5.4:+50376772 None:intergenic
TGTACCCATGGAGCAACATC+TGG 0.365811 5.4:+50371049 None:intergenic
CCCTTTGGATCTCTGTTCAA+TGG 0.367609 5.4:+50378306 None:intergenic
AACTTGATAAAAGATCATTT+TGG 0.370791 5.4:-50379238 MS.gene050076:CDS
AGTTATACTTACCTCATAAT+CGG 0.383011 5.4:+50370991 None:intergenic
GGAAGTAGAAAGCGGTAGTT+TGG 0.383869 5.4:+50380551 None:intergenic
ATCAGACCCCAGAACGCATT+TGG 0.387151 5.4:+50379514 None:intergenic
AGAGGGGAGAATTCCAATTT+GGG 0.391351 5.4:-50371537 MS.gene050076:CDS
AACAATTTGGTTGTAGCAAT+GGG 0.392030 5.4:-50374455 MS.gene050076:CDS
TGCCATGTTTCCAGAATAAG+AGG 0.398392 5.4:+50376846 None:intergenic
CCTTCTCTCCATCCACTTGG+TGG 0.400089 5.4:-50374404 MS.gene050076:CDS
GTCTCTGTTGCATCCTGATC+AGG 0.401349 5.4:+50371088 None:intergenic
ATATATATCGGCGTATTTGA+TGG 0.406101 5.4:+50378229 None:intergenic
GTTGTTCGCTAGCCGTGAAT+CGG 0.409046 5.4:+50378791 None:intergenic
TACACTGCATATGGATCAAA+TGG 0.413956 5.4:-50371904 MS.gene050076:CDS
AGTTTCATTAACCAGTTCAA+TGG 0.414898 5.4:+50379025 None:intergenic
TGTTAAGGGGCAAAACCCTT+TGG 0.415474 5.4:+50378291 None:intergenic
TTCACAAAATTGAGTACCTT+GGG 0.415559 5.4:-50370843 MS.gene050076:CDS
ATCTGGATCAGATGCCAATA+AGG 0.416378 5.4:+50371066 None:intergenic
CAGCAATTCAGAAGCTGGTC+TGG 0.416594 5.4:-50378990 MS.gene050076:CDS
ATGAGATCTGCATAGGAAAT+AGG 0.417756 5.4:+50372206 None:intergenic
AAGGATATGCTTGCATTTAG+TGG 0.421519 5.4:-50378508 MS.gene050076:CDS
CAAATGGTTCTATCCGGTTC+AGG 0.423018 5.4:-50372666 MS.gene050076:intron
GTCATTGAACTTGTGATCCT+TGG 0.424496 5.4:+50381130 None:intergenic
AATTTACTGTACACTGCATA+TGG 0.431142 5.4:-50371913 MS.gene050076:CDS
GAGACGTTCTTAAATGCATT+GGG 0.431162 5.4:-50373931 MS.gene050076:CDS
TAAGAAGCTTCCCATTGAAC+TGG 0.432733 5.4:-50379036 MS.gene050076:CDS
GGGATCGCAGTTCAGCCATA+TGG 0.436141 5.4:+50378176 None:intergenic
GCTGTGTTGTCCGCATTCAT+AGG 0.436481 5.4:-50371112 MS.gene050076:CDS
TTCGGGATGGTGGTTCTGTC+CGG 0.439975 5.4:+50375979 None:intergenic
CCTTTGGATCTCTGTTCAAT+GGG 0.441956 5.4:+50378307 None:intergenic
GCTGCTGCAGATATGTGATA+TGG 0.442498 5.4:-50379303 MS.gene050076:intron
TTGGGAGAAAGCAAGTGTTC+AGG 0.442764 5.4:-50371519 MS.gene050076:CDS
ACAACCAAATTGTTATTGTT+TGG 0.443960 5.4:+50374464 None:intergenic
GGAAGAAACCCACGATTTGA+TGG 0.448938 5.4:+50379704 None:intergenic
TGGGTTCTTGTAGTTGTTGG+TGG 0.450414 5.4:-50378581 MS.gene050076:intron
GGTTTGTTCGATAGGCAATT+TGG 0.451516 5.4:-50371587 MS.gene050076:CDS
CGCATTCATAGGTCCTGATC+AGG 0.453856 5.4:-50371101 MS.gene050076:CDS
ATCTACCACGTCCAAGAAAA+CGG 0.454674 5.4:+50376803 None:intergenic
AAGAGAAGAGGTACCTGAAC+CGG 0.454895 5.4:+50372653 None:intergenic
CTGAACCGGATAGAACCATT+TGG 0.455331 5.4:+50372667 None:intergenic
ACGAAAACGGGTGGCCCAAA+TGG 0.456412 5.4:-50372682 MS.gene050076:CDS
GAAATGTTCAACCTGCATAC+TGG 0.458175 5.4:+50372183 None:intergenic
CCCTTAACACCAAAAGAAGT+TGG 0.459234 5.4:-50378277 MS.gene050076:CDS
TCAAGCTCTGGATTGCTCAT+TGG 0.460571 5.4:-50373183 MS.gene050076:CDS
AGAGACGTTCTTAAATGCAT+TGG 0.460717 5.4:-50373932 MS.gene050076:CDS
TAACAATTTGGTTGTAGCAA+TGG 0.462985 5.4:-50374456 MS.gene050076:CDS
TGCTCATTAACAATGGATAA+CGG 0.464251 5.4:+50378155 None:intergenic
CAAATTGGAATTCTCCCCTC+TGG 0.464493 5.4:+50371539 None:intergenic
AAGTTTGTAGGAAACGAAAA+CGG 0.465356 5.4:-50372695 MS.gene050076:intron
TGTCTCTCGAACCGATTATG+AGG 0.467601 5.4:-50371002 MS.gene050076:intron
GGACCAATTTCTGGAACAAA+GGG 0.467754 5.4:-50376062 MS.gene050076:CDS
GCTCATTAACAATGGATAAC+GGG 0.470980 5.4:+50378156 None:intergenic
AAATGCATTGGGTTGACCAT+TGG 0.473112 5.4:-50373920 MS.gene050076:CDS
CATTGGGTTGACCATTGGTT+TGG 0.475274 5.4:-50373915 MS.gene050076:intron
TCTCCAGCAGCAATATATAT+CGG 0.475843 5.4:+50378217 None:intergenic
AGCGCTGTCTGCGTTCTATT+AGG 0.478156 5.4:+50373142 None:intergenic
CTGGAACAAAGGGCATGGAC+AGG 0.479557 5.4:-50376052 MS.gene050076:CDS
TCTGTCCGGCATAAACAATC+AGG 0.479669 5.4:+50375993 None:intergenic
AGTTTGTAGGAAACGAAAAC+GGG 0.482225 5.4:-50372694 MS.gene050076:intron
AAGGAAGAGTTGAGATAGAG+AGG 0.482524 5.4:+50374423 None:intergenic
AGAATGAAATTGCGAAATTG+TGG 0.482708 5.4:-50378953 MS.gene050076:CDS
CTTCCTTCTCTCCATCCACT+TGG 0.486731 5.4:-50374407 MS.gene050076:CDS
GTGCTTCAAAATCCGATTCA+CGG 0.487719 5.4:-50378803 MS.gene050076:CDS
ACTGGTTAATGAAACTGAAA+TGG 0.488831 5.4:-50379018 MS.gene050076:CDS
GTTTCATTAACCAGTTCAAT+GGG 0.492074 5.4:+50379026 None:intergenic
AAAGGGTTCAAGCTCCTCAA+TGG 0.494267 5.4:+50376936 None:intergenic
TGAACCGGATAGAACCATTT+GGG 0.495657 5.4:+50372668 None:intergenic
GAAACGGAAGTTGATTTCGT+TGG 0.497885 5.4:-50381237 MS.gene050076:CDS
GTAGATCAATATCTCCAGAT+AGG 0.498951 5.4:-50376786 MS.gene050076:intron
TTTCACAAAATTGAGTACCT+TGG 0.502680 5.4:-50370844 MS.gene050076:CDS
AGGACCAATTTCTGGAACAA+AGG 0.503299 5.4:-50376063 MS.gene050076:CDS
AGAGCCAGTGTTAGTATGGA+TGG 0.505937 5.4:+50372821 None:intergenic
AACTTGTGATCCTTGGAAGA+AGG 0.508167 5.4:+50381137 None:intergenic
TGATCCAGATGTTGCTCCAT+GGG 0.508395 5.4:-50371053 MS.gene050076:CDS
GCGGTGGAAATGAGGAGAAA+GGG 0.509126 5.4:-50371936 MS.gene050076:CDS
TGATGCTTTGACTTATGATA+AGG 0.512220 5.4:-50372795 MS.gene050076:intron
ATAGGAAATAGGTCCACCTT+TGG 0.513096 5.4:+50372217 None:intergenic
ACGCCGATATATATTGCTGC+TGG 0.514499 5.4:-50378220 MS.gene050076:CDS
CTGATCCAGATGTTGCTCCA+TGG 0.515839 5.4:-50371054 MS.gene050076:CDS
AGTAGGCTTTGGTCCTCGCC+AGG 0.516067 5.4:-50371474 MS.gene050076:intron
CCACCAAGTGGATGGAGAGA+AGG 0.516532 5.4:+50374404 None:intergenic
AGTATGGATGGAGTAAGATC+AGG 0.517274 5.4:+50372833 None:intergenic
TCGCAAATGCGGTGGAAATG+AGG 0.517351 5.4:-50371944 MS.gene050076:CDS
CCGGCATAAACAATCAGGTA+AGG 0.520689 5.4:+50375998 None:intergenic
CTTGCATTTACGTTATGAGA+AGG 0.521610 5.4:-50378527 MS.gene050076:CDS
TTTACACATTCCTTCTTCCA+AGG 0.523043 5.4:-50381147 MS.gene050076:CDS
TAGGAGTCGATATCAAGCTC+TGG 0.525655 5.4:-50373195 MS.gene050076:CDS
GAACGTCTCTTCGCCTCCAA+TGG 0.527293 5.4:+50373945 None:intergenic
GGATCGCAGTTCAGCCATAT+GGG 0.527426 5.4:+50378177 None:intergenic
ATGAAGAAGAACAGTTCCAT+TGG 0.527682 5.4:-50373961 MS.gene050076:CDS
TGCGGTGGAAATGAGGAGAA+AGG 0.528919 5.4:-50371937 MS.gene050076:CDS
TTACCGGTGTAATTAGGAGT+AGG 0.531434 5.4:+50379671 None:intergenic
TATTAGGTCAGCAGCATTAG+CGG 0.531810 5.4:+50373158 None:intergenic
AGATATCCACGTGACTCAGC+AGG 0.532601 5.4:+50379564 None:intergenic
CCTTACCTGATTGTTTATGC+CGG 0.534377 5.4:-50375998 MS.gene050076:CDS
GTGGCCCAAATGGTTCTATC+CGG 0.536727 5.4:-50372672 MS.gene050076:CDS
GACAGGTTCAAAACTTGCAA+CGG 0.537548 5.4:-50380602 MS.gene050076:intron
CCCATTGAACAGAGATCCAA+AGG 0.538267 5.4:-50378307 MS.gene050076:CDS
TTAGGAGTAGGCTTTGTACA+TGG 0.540757 5.4:+50379683 None:intergenic
GGAAACATTGGCATCCATTG+AGG 0.544087 5.4:-50376950 MS.gene050076:CDS
AAGAAGAACAGTTCCATTGG+AGG 0.546098 5.4:-50373958 MS.gene050076:CDS
GTTCAATACGAGGAGAGAAA+CGG 0.548881 5.4:+50378715 None:intergenic
TTAAGCAGCAATTCAGAAGC+TGG 0.549204 5.4:-50378995 MS.gene050076:CDS
ACTACCGCTTTCTACTTCCA+AGG 0.552739 5.4:-50380547 MS.gene050076:intron
GGCTCCCCTAGGAAGAGAAA+AGG 0.553362 5.4:-50376083 MS.gene050076:CDS
TATAGCACAAAGTGCAACAA+AGG 0.553454 5.4:-50371989 MS.gene050076:intron
TCAGGAGTGGAATGCAGAAA+CGG 0.553725 5.4:-50381253 None:intergenic
AATGAGAACCACCAAGTGGA+TGG 0.555144 5.4:+50374396 None:intergenic
ATTACCTTGCTCATTAACAA+TGG 0.555234 5.4:+50378148 None:intergenic
GCAGATCTCATCCAGTATGC+AGG 0.556332 5.4:-50372194 MS.gene050076:intron
ATCAGTGGGGTTTGTTCGAT+AGG 0.556677 5.4:-50371595 MS.gene050076:intron
ATTCAGAAGCTGGTCTGGCA+TGG 0.556723 5.4:-50378985 MS.gene050076:CDS
GTTGCAGACTTGGCTCCCCT+AGG 0.557571 5.4:-50376094 MS.gene050076:intron
AACATGGCAAGGGCTGTTGA+AGG 0.559163 5.4:-50376832 MS.gene050076:CDS
GGTGGAAAGAATGAGGTCAC+GGG 0.561755 5.4:-50378563 MS.gene050076:CDS
TGATTTCGTTGGTATTGTTG+AGG 0.563708 5.4:-50381226 MS.gene050076:CDS
TTATCCATTGTTAATGAGCA+AGG 0.563833 5.4:-50378152 MS.gene050076:intron
AGAAAACTTACCGTCTAATG+TGG 0.566828 5.4:+50376561 None:intergenic
TTGATGAAGCTGAAGAGCTA+CGG 0.571251 5.4:-50378465 MS.gene050076:CDS
ATGGATATCCAAGAGCAGTA+AGG 0.573769 5.4:+50378248 None:intergenic
GAATGAAATTGCGAAATTGT+GGG 0.574518 5.4:-50378952 MS.gene050076:CDS
AATAAGTAGACCTGAAAACA+AGG 0.576124 5.4:-50372297 MS.gene050076:CDS
TGAGAGATATTTCGGGATGG+TGG 0.578494 5.4:+50375969 None:intergenic
TGCATATGGATCAAATGGAC+AGG 0.579849 5.4:-50371899 MS.gene050076:intron
AGACAGTTTCACGGCTCCGT+TGG 0.582710 5.4:+50371020 None:intergenic
ACCCTCTTATTCTGGAAACA+TGG 0.583745 5.4:-50376848 MS.gene050076:CDS
CGGCATAAACAATCAGGTAA+GGG 0.584278 5.4:+50375999 None:intergenic
TGTTCGATAGGCAATTTGGT+AGG 0.585772 5.4:-50371583 MS.gene050076:CDS
TACTCCATCCATACTAACAC+TGG 0.594364 5.4:-50372825 MS.gene050076:CDS
TTATCGATCTCCACATTAGA+CGG 0.595056 5.4:-50376571 MS.gene050076:intron
CGGTTCGAGAGACAGTTTCA+CGG 0.595390 5.4:+50371011 None:intergenic
TGGTGGAAAGAATGAGGTCA+CGG 0.597765 5.4:-50378564 MS.gene050076:CDS
ATAGATTCATATTCCAAAGG+TGG 0.598179 5.4:-50372230 MS.gene050076:CDS
TCTGCAATTCGCAAATGCGG+TGG 0.600496 5.4:-50371952 MS.gene050076:CDS
CTTATTCTGGAAACATGGCA+AGG 0.605190 5.4:-50376843 MS.gene050076:CDS
TGGAAGCCTCCATCAAATCG+TGG 0.605466 5.4:-50379713 MS.gene050076:CDS
CTTCTCATAACGTAAATGCA+AGG 0.610880 5.4:+50378528 None:intergenic
GGAGTGCTTCATAGCAAGCT+CGG 0.612642 5.4:+50378736 None:intergenic
CTCTTTGATAAACTAGATCA+GGG 0.612879 5.4:-50376629 MS.gene050076:CDS
TTATTCTGGAAACATGGCAA+GGG 0.613440 5.4:-50376842 MS.gene050076:CDS
TACTGACGAGGCAGATCCAG+AGG 0.614094 5.4:-50371555 MS.gene050076:CDS
GCTTCTGCAATTCGCAAATG+CGG 0.614456 5.4:-50371955 MS.gene050076:CDS
GATCAGGGAACAATGACTGA+GGG 0.614988 5.4:-50376614 MS.gene050076:CDS
GAGATAGATTCATATTCCAA+AGG 0.616050 5.4:-50372233 MS.gene050076:CDS
AATTTCTGGAACAAAGGGCA+TGG 0.616321 5.4:-50376057 MS.gene050076:CDS
AGTTGTTGGTGGAAAGAATG+AGG 0.619060 5.4:-50378570 MS.gene050076:CDS
ATTCAGATTACGTGAAGCTG+TGG 0.619899 5.4:-50379733 MS.gene050076:CDS
AAGGACTCTTACCAAACCAA+TGG 0.620905 5.4:+50373904 None:intergenic
TCAGCTCCTGCTGAGTCACG+TGG 0.623167 5.4:-50379570 MS.gene050076:intron
GTTTATCAAAGAGACGAACA+AGG 0.627742 5.4:+50376639 None:intergenic
GGAAGCCTCCATCAAATCGT+GGG 0.632206 5.4:-50379712 MS.gene050076:CDS
AAACACTTACTGAACGAGGT+TGG 0.637325 5.4:+50374348 None:intergenic
ATACTGGATGAGATCTGCAT+AGG 0.640053 5.4:+50372199 None:intergenic
TAAGTAGACCTGAAAACAAG+GGG 0.641900 5.4:-50372295 MS.gene050076:CDS
GCTCAACCAAATGCGTTCTG+GGG 0.642223 5.4:-50379520 MS.gene050076:intron
AGCGGTAGTTTGGATAAATG+GGG 0.645429 5.4:+50380561 None:intergenic
ATAAGTAGACCTGAAAACAA+GGG 0.645785 5.4:-50372296 MS.gene050076:CDS
AGAAACCCACGATTTGATGG+AGG 0.647632 5.4:+50379707 None:intergenic
ACTGACGAGGCAGATCCAGA+GGG 0.648159 5.4:-50371554 MS.gene050076:CDS
TGACAGTTGAATCGTTCACG+AGG 0.649775 5.4:-50379758 MS.gene050076:intron
GACAGTTGAATCGTTCACGA+GGG 0.649855 5.4:-50379757 MS.gene050076:intron
AACCAAACACTTACTGAACG+AGG 0.658415 5.4:+50374344 None:intergenic
ACAGTTGAATCGTTCACGAG+GGG 0.659003 5.4:-50379756 MS.gene050076:intron
TTTATCAAAGAGACGAACAA+GGG 0.661916 5.4:+50376640 None:intergenic
GTTCAATGACAAGTTCCCCA+CGG 0.663280 5.4:-50381117 MS.gene050076:intron
TGCTGCTGGAGAGATTTATG+GGG 0.665029 5.4:-50378206 MS.gene050076:CDS
GTAATGTCGATCTTCTTGCG+AGG 0.665206 5.4:+50370789 None:intergenic
AATTGAGAGATATTTCGGGA+TGG 0.666196 5.4:+50375966 None:intergenic
CCATTGAACAGAGATCCAAA+GGG 0.667906 5.4:-50378306 MS.gene050076:CDS
TTTCCTATTTGTTCAATACG+AGG 0.670840 5.4:+50378705 None:intergenic
GGTAGTTTGGATAAATGGGG+TGG 0.674551 5.4:+50380564 None:intergenic
AAGCCTACTCCTAATTACAC+CGG 0.679696 5.4:-50379674 MS.gene050076:intron
TTGTAGGAAACGAAAACGGG+TGG 0.681028 5.4:-50372691 MS.gene050076:intron
GCCATGTTTCCAGAATAAGA+GGG 0.683016 5.4:+50376847 None:intergenic
CTGATCAGGACCTATGAATG+CGG 0.688238 5.4:+50371102 None:intergenic
AGATCAGGGAACAATGACTG+AGG 0.696946 5.4:-50376615 MS.gene050076:CDS
AATATGGGAAGTACCTGGCG+AGG 0.697506 5.4:+50371461 None:intergenic
GGATAATGAGAACCACCAAG+TGG 0.698522 5.4:+50374392 None:intergenic
ATCAGGGAACAATGACTGAG+GGG 0.699349 5.4:-50376613 MS.gene050076:CDS
CAAACCTTGGAAGTAGAAAG+CGG 0.712858 5.4:+50380543 None:intergenic
GTGGAAAGAATGAGGTCACG+GGG 0.716960 5.4:-50378562 MS.gene050076:CDS
GCTGCTGGAGAGATTTATGG+GGG 0.724681 5.4:-50378205 MS.gene050076:CDS
TGGTAGGACTGATACTGACG+AGG 0.738100 5.4:-50371567 MS.gene050076:CDS
CTGACGAGGCAGATCCAGAG+GGG 0.738388 5.4:-50371553 MS.gene050076:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr5.4 gene 50370773 50381264 50370773 ID=MS.gene050076
chr5.4 mRNA 50370773 50381264 50370773 ID=MS.gene050076.t1;Parent=MS.gene050076
chr5.4 exon 50381118 50381264 50381118 ID=MS.gene050076.t1.exon1;Parent=MS.gene050076.t1
chr5.4 CDS 50381118 50381264 50381118 ID=cds.MS.gene050076.t1;Parent=MS.gene050076.t1
chr5.4 exon 50380548 50380619 50380548 ID=MS.gene050076.t1.exon2;Parent=MS.gene050076.t1
chr5.4 CDS 50380548 50380619 50380548 ID=cds.MS.gene050076.t1;Parent=MS.gene050076.t1
chr5.4 exon 50379675 50379774 50379675 ID=MS.gene050076.t1.exon3;Parent=MS.gene050076.t1
chr5.4 CDS 50379675 50379774 50379675 ID=cds.MS.gene050076.t1;Parent=MS.gene050076.t1
chr5.4 exon 50379521 50379588 50379521 ID=MS.gene050076.t1.exon4;Parent=MS.gene050076.t1
chr5.4 CDS 50379521 50379588 50379521 ID=cds.MS.gene050076.t1;Parent=MS.gene050076.t1
chr5.4 exon 50379227 50379315 50379227 ID=MS.gene050076.t1.exon5;Parent=MS.gene050076.t1
chr5.4 CDS 50379227 50379315 50379227 ID=cds.MS.gene050076.t1;Parent=MS.gene050076.t1
chr5.4 exon 50378941 50379124 50378941 ID=MS.gene050076.t1.exon6;Parent=MS.gene050076.t1
chr5.4 CDS 50378941 50379124 50378941 ID=cds.MS.gene050076.t1;Parent=MS.gene050076.t1
chr5.4 exon 50378704 50378832 50378704 ID=MS.gene050076.t1.exon7;Parent=MS.gene050076.t1
chr5.4 CDS 50378704 50378832 50378704 ID=cds.MS.gene050076.t1;Parent=MS.gene050076.t1
chr5.4 exon 50378457 50378590 50378457 ID=MS.gene050076.t1.exon8;Parent=MS.gene050076.t1
chr5.4 CDS 50378457 50378590 50378457 ID=cds.MS.gene050076.t1;Parent=MS.gene050076.t1
chr5.4 exon 50378153 50378366 50378153 ID=MS.gene050076.t1.exon9;Parent=MS.gene050076.t1
chr5.4 CDS 50378153 50378366 50378153 ID=cds.MS.gene050076.t1;Parent=MS.gene050076.t1
chr5.4 exon 50376787 50376971 50376787 ID=MS.gene050076.t1.exon10;Parent=MS.gene050076.t1
chr5.4 CDS 50376787 50376971 50376787 ID=cds.MS.gene050076.t1;Parent=MS.gene050076.t1
chr5.4 exon 50376572 50376667 50376572 ID=MS.gene050076.t1.exon11;Parent=MS.gene050076.t1
chr5.4 CDS 50376572 50376667 50376572 ID=cds.MS.gene050076.t1;Parent=MS.gene050076.t1
chr5.4 exon 50375960 50376109 50375960 ID=MS.gene050076.t1.exon12;Parent=MS.gene050076.t1
chr5.4 CDS 50375960 50376109 50375960 ID=cds.MS.gene050076.t1;Parent=MS.gene050076.t1
chr5.4 exon 50374358 50374499 50374358 ID=MS.gene050076.t1.exon13;Parent=MS.gene050076.t1
chr5.4 CDS 50374358 50374499 50374358 ID=cds.MS.gene050076.t1;Parent=MS.gene050076.t1
chr5.4 exon 50373916 50374023 50373916 ID=MS.gene050076.t1.exon14;Parent=MS.gene050076.t1
chr5.4 CDS 50373916 50374023 50373916 ID=cds.MS.gene050076.t1;Parent=MS.gene050076.t1
chr5.4 exon 50373130 50373214 50373130 ID=MS.gene050076.t1.exon15;Parent=MS.gene050076.t1
chr5.4 CDS 50373130 50373214 50373130 ID=cds.MS.gene050076.t1;Parent=MS.gene050076.t1
chr5.4 exon 50372998 50373032 50372998 ID=MS.gene050076.t1.exon16;Parent=MS.gene050076.t1
chr5.4 CDS 50372998 50373032 50372998 ID=cds.MS.gene050076.t1;Parent=MS.gene050076.t1
chr5.4 exon 50372796 50372861 50372796 ID=MS.gene050076.t1.exon17;Parent=MS.gene050076.t1
chr5.4 CDS 50372796 50372861 50372796 ID=cds.MS.gene050076.t1;Parent=MS.gene050076.t1
chr5.4 exon 50372667 50372707 50372667 ID=MS.gene050076.t1.exon18;Parent=MS.gene050076.t1
chr5.4 CDS 50372667 50372707 50372667 ID=cds.MS.gene050076.t1;Parent=MS.gene050076.t1
chr5.4 exon 50372195 50372325 50372195 ID=MS.gene050076.t1.exon19;Parent=MS.gene050076.t1
chr5.4 CDS 50372195 50372325 50372195 ID=cds.MS.gene050076.t1;Parent=MS.gene050076.t1
chr5.4 exon 50371900 50372006 50371900 ID=MS.gene050076.t1.exon20;Parent=MS.gene050076.t1
chr5.4 CDS 50371900 50372006 50371900 ID=cds.MS.gene050076.t1;Parent=MS.gene050076.t1
chr5.4 exon 50371475 50371612 50371475 ID=MS.gene050076.t1.exon21;Parent=MS.gene050076.t1
chr5.4 CDS 50371475 50371612 50371475 ID=cds.MS.gene050076.t1;Parent=MS.gene050076.t1
chr5.4 exon 50371003 50371137 50371003 ID=MS.gene050076.t1.exon22;Parent=MS.gene050076.t1
chr5.4 CDS 50371003 50371137 50371003 ID=cds.MS.gene050076.t1;Parent=MS.gene050076.t1
chr5.4 exon 50370773 50370883 50370773 ID=MS.gene050076.t1.exon23;Parent=MS.gene050076.t1
chr5.4 CDS 50370773 50370883 50370773 ID=cds.MS.gene050076.t1;Parent=MS.gene050076.t1
Gene Sequence

>MS.gene050076

ATGCAGAAACGGAAGTTGATTTCGTTGGTATTGTTGAGGAAGTTGTTAACTGCAGCGATTATCTCAATTACTTTTCTTGCTTTTTTCACTGGTCATTTACACATTCCTTCTTCCAAGGATCACAAGTTCAATGACAAGTTCCCCACGGTTTGTCTCTTTCTTCTTTAATTTTAGTCAAATCTATTATTTTAGGGTTCTTTAAACTTGTTCATATGAATTATTTATTATCAGGGTTTTATTCAATTGTTATTGCTTATTTTATACTTTGTTGACTTCAAGAGATTGCTATTAATGGCTAACAATGTTAAAAAAAACAAGGGTCTTTGTTCACATTGGTAGGTTTGGTATATTCTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTTTTTTTTTTTTTTGTATATTGGAATCTACTTAGGGAAACTTTATTAGAGTGGAAGATTGGAAACTTTGTTAGAGAGTGGAAGATTCCCTTATGTTTTGTTGTTGTAATTGTTGTCATATGTGTTTCAAATTTGGGAGAGGTCAACCGCTTAAATGGATCTTAGTTACCTCGAGGGGATTAGTCTCTGCAGTTGCTTCTGAAGGATACCTTTGGTTTACTAAAAGTATGTCTTTCAAATTTTGACAGGTTCAAAACTTGCAACGGACACAAGAGCTAGCTCCACCCCATTTATCCAAACTACCGCTTTCTACTTCCAAGGTTTGGTCCTGCGTGTCACCACTAGCTAGTAACTTGTTTGGGTATATCATCTGTTTAAAAACTATGAAAATGCTAAGGAAATATAATATCCTACATCTAAGAAAACTATCTTTGTATCCACCAATGAGCTTATTAAATTAGGCCTTGTTTGGATAAACAACTTAATTAGTTCTTATAGCATAATCGTTTATCATATAAGTGCTTATGTATAAGTTTTTTCTATAACAAAAGATAAAATTAAGTCGAACTGTTTTCATATGAGCTATAAGTAGCTTTCATAATCTATCCTAGAATGCTTATCAAATTACCTGAAAACAGTTAATTGACATGTGATAAACTGTTTCCATTAGTTCTCTCAAATTGTTCGTCAAGTGTTTATGCCAGTAGTTAAGCTCAAATAAGTCAATCCAAATAATAATAGTTCGAACGTTGGCTTAATTGCAAACATGTATTTTAATACGTTAGTGAATCTCCTCTCCTATTCCCTATCGAGTAGGTGGGACAGTTGATTATGCTCATTTCTAGGGTTTATGCACCTCTTGTATTGTGTGATCTTAAACTTGTTTGGGTTGATTGTATAAACATCTGCAGAGATATTGGTGTATCATGTATGCATCTAGATATATTTAAATTATGTAAAGAAGATATGCACCTTAAGTGTTTGGTTGTATTACATTTGCAGAGATATTGGTGTATCATGTATGCAGCTATATATATTTAAAGTATGTAAAGATACCTTTTTAGTGTTTTATATGACTCTTTCTGTTTGACAGTTGAATCGTTCACGAGGGGATTCAGATTACGTGAAGCTGTGGAAGCCTCCATCAAATCGTGGGTTTCTTCCATGTACAAAGCCTACTCCTAATTACACCGGTAAGAAACTTAAACATAGACTTTCATTACAAGTTTCAAGTATGAATTAGTTTGGTACTTACTCAGATTAATACATGTTCATTCAGCTCCTGCTGAGTCACGTGGATATCTTTTAGTTCATACAAATGGTGGGCTCAACCAAATGCGTTCTGGGGTCTGATCTTTCTCTTTTCTCTTTGTTAATCATATATGCATGTTGTTATTATTAATGCCGACTCGTCTGAGGCTGAACATTTTTTTTGAAAATTGTTTGTTATGCCGTTGGATGACAAATTGTGAATGAGAAGGACCATCGCATTTAAACTTGTCTTATTCAAGTGTTGTTAGAAACTGAACATATGTTTCCTTTGCTGCTGCAGATATGTGATATGGTAGCTGTAGCTCGTATCATAAATGCTACTCTTGTAATTCCAGAACTTGATAAAAGATCATTTTGGCAAGATACTAGGTAAAAAATTTAATTCCTTTTTTTTTGCTATTATTTCTTTTATAGTTTCTCTTTATGTTAGACTCTTTTTTGTTAATTTTGGTTTTATGATTTTTCTTTCAGCAACTTCTCTGATGTTTTTGATGAAGAGCATTTTATTAGTTCTCTAGCTAACGATGTAAAAATCATTAAGAAGCTTCCCATTGAACTGGTTAATGAAACTGAAATGGTTAAGCAGCAATTCAGAAGCTGGTCTGGCATGGATTACTATGAGAATGAAATTGCGAAATTGTGGGAAGATCACGAAGTATGTATGTTGAAAATCTATTGTTACTACCGTTCTATGTTACCATTCTATTTTTTTCACCATTATTTTCTAACATTATTGCACCCATAATATTTTTAACTTCTTCAGGTTATTCGTGCTTCAAAATCCGATTCACGGCTAGCGAACAACAATCTACCTCCAGACATTCAAAAGCTTCGTTGCCGAGCTTGCTATGAAGCACTCCGTTTCTCTCCTCGTATTGAACAAATAGGAAAAGTATATGATGATATCTCAACTGATTGGTTTCTTTGCTTTCTATCTAATACTTTTCCACAACCCTGTATTAATTTTTATTCTCAATCTGTAATACTATTTTTGGGTTCTTGTAGTTGTTGGTGGAAAGAATGAGGTCACGGGGTCCATATATTGCCTTGCATTTACGTTATGAGAAGGATATGCTTGCATTTAGTGGATGCACGCATGATTTATCTCTTGATGAAGCTGAAGAGCTACGGATTATCAGGTATGGAACTGTGGAATCTTAAGGATAAATTGAATGTCATGTCTTTTCTCATACATGGTTTGTGATATTTATCATATGGCAAACTTGTAGAGAGAACATTTCCTATTGGAAAGTAAAAGATATTGATCCCATTGAACAGAGATCCAAAGGGTTTTGCCCCTTAACACCAAAAGAAGTTGGAATTTTCCTTACTGCTCTTGGATATCCATCAAATACGCCGATATATATTGCTGCTGGAGAGATTTATGGGGGTGAGTCCCATATGGCTGAACTGCGATCCCGTTATCCATTGTTAATGAGCAAGGTAATAATTGCAGTTCTTTGTTGCTTTATGTTGTTTACATGTGGTGGGGGCTTTTTATTCAATATATATCTTTAGAAAATAAAGTTTGATAAGGCATTAGTATTTTCTGTACCCCAAAACGCTATGTAGCAGTATACCCATTACGTTAAAGTTTAAGGAAACAATACATGAAACTCGTCATACGCATAAAAGCTAAATGAAATAGAAGAACACGCAAGATTAGTGACATATTCACAACTAATAATCAAAGTTCATTGCTGCTCAAACCCTATACAGGGCAAATAAGTTTTAGCCTCCAAGGTTAAAATAACTCATCCAAGTATTTTCAATATTCTCTCTTCGGTCATATATATAAGCAAAAAATCTTTTTTCTGGTTGATATATATTATAAACCAAATAAAGGGATCTTTATTCTATGAAGCTGAAAAAGGAATCTTTGCTTATGTATGAGACCAGAGAGAGTATACAAGTGATTCCTTAATAGAATCACAATCTCTAAGGTGTGGATGATTGCTGAAAGTCACATAAAGAATTGGCCGAAAGCCACACAAGGTAAGAGCTGAGGAGGGTAGGTGAACCTGATTTGGAAAAAAATCACAAGACACGAGTGCCTTATTTTGTTGGCATTCAAAATTTTATGTTAAAATGACCGAAAGGTCTGAAATAAAAGAGGACACAACTGTAAGTTGAGGGTAAAACAACGGCTATTTTATGGTGAAGTGACCAAAAGGTCCAAAAAAATGAAAACATTTGCGGAAGTTTCACTGTAGCTGCTGCAGCAACTGCTATTTGGCCGCCGTCTGATCACGCCACTATAGGCGATGCTTCAACTGCCATGCAAAACCAAAACGCAATGGGGTTTCATATAGTGTCTTGGGGTCGCTATCCAACAGGACAGCACTATATTGACAGCTTAGGGTGAGCTTATCTGATCATAAGTGGGAGCACAAGAATATTTTAGTCCTGGCACATTATTTTGCATCGAGAGTTAGTATAACTATCATTTTCTTAAGATGTGTGCATTACCTTAAATGGCCATTATTATGAGACAGAGGGAGTAATATTACGATCAAATAGCTTAAAAATAAAATATATAGTTGACTTCTGCTTTTCTGGGATTATAGCTGAATGATAGGAAGCATTGGTATGATGTGTAGTAACCTTCATGTGATTATTTTCAGGAAACATTGGCATCCATTGAGGAGCTTGAACCCTTTTTTAATCATGCTTCTCAAATGGCTGCTCTTGACTATATTGTATCTATCGAGAGTGATGTATTTATACCCTCTTATTCTGGAAACATGGCAAGGGCTGTTGAAGGTCATCGCCGTTTTCTTGGACGTGGTAGATCAATATCTCCAGATAGGTAAGCTGTTGTTTACTCAAGGAGCACATATTTATTTATCTTTTAAAAATTGTTTAATTACCTTTTTCTAGTTCACCCTTTACAAAGTTGTTTTGTTTGTCCTGTCTTGTTTCAAATAGGAAAGCCCTTGTTCGTCTCTTTGATAAACTAGATCAGGGAACAATGACTGAGGGGAAAAAACTGTCAAATAGGATTATCGATCTCCACATTAGACGGTAAGTTTTCTTTTCTTTCTTTTTTATTTGCAGAGAAATTGTTTATGTGGTTGTCAGCTCGGTGGTAAGAGTCGTATCCTGTAACTTTAAAGAACGAAGTTCAAATCCCTGTTGGAGACAGTGTTGTTAGCCATTAGTGCCACACTAATAAATAATAATTTCTACTACTCGAAATAACTTCTCCAGTTTTGTTTTTAAATTTTTTTTTGGAGGAATTGTAAATTTTGTTACATACATGTCATGAAAATTTTGGTATTGTCTCTTAGGCCTAAGCCTAACTTAACTCCCTATGGTAGCTCAAGAATGAGGATTATCCAAGTCTTACAAACACTACTTTGGCCATATTTCAATTCTCATGTCAACATTATGTTTCATCTATTGAAAAAATATAGTTTATAATGTACTCATTCTTATACGACGATCTCAGATTGAACTTCTGGTTGTGAAATTGTTGTGTTGCAGACTTGGCTCCCCTAGGAAGAGAAAAGGACCAATTTCTGGAACAAAGGGCATGGACAGGTTTCGCTCAGAAGAAACCTTTTATGCTAATCCCTTACCTGATTGTTTATGCCGGACAGAACCACCATCCCGAAATATCTCTCAATTTGTCAAGTAGATCAGATACAAGGGTGGAAGAGTGTATATATCGAAATCGGTTTTGCATTACCCGATTTTTATTTTTTGAAAAGGCGTTTTGCATGAACCGATTAATTTGGGAAGGAAAAGAACAGAAAAGAAACCCATAACTAGGTTTTGATTGGTACACAGTTATGTCCTTGAAGGATGGAGCTTTCTGATACGTGGCCGGGGGATTCAGCCACACATTTTATTTTATTTCTCAGTGAGAAATCATACATAGTTCCACTATAAGTTCCACTATAAGTAGTATTTATTTTATTTAATTGATTTTAGTATTTTAACTTTTTTTATAGGAAAATGTTAGTAAGTTAGTGATTATGTTAATTTTTTGGGTTTGAAGGTTGTATCTCATGTTTAAAATTCATTTGATGTCTTTTAACTCACCAACTGAATTACCTACTTACAACAATATTTTCACTGTTTATTTGCCCTTTAGCATTCTATCGCCTCTTGTAAATAAAAAGACACAGATTTTTGTCTGCTAACAAGTGCCTGTTAATGCTAACGTCTATTAAGTTTTGCAACAATTTGATGAATGGTGAGAAAGGATTTAAAATTCTATTACAAAAAAGCCAGAATTTATAAACAAATCGTTGGTATCTATTCATTGAATTCTTAATTCTTTTTTCGTATTAATTGAATAAATGATGTATTTGATCTATATGTTATATAAATTAATTACATTAATTATTAAATGAATTTGAAAAATGAATTTTTGTTTATATTTTAGATCAGAACATGTTTATATAATAAACTTTGATTCAGATGCTCTTTCTTGTTGGTTGAAACAACATTATGTATAAATCACCGAACAACATTATTTCATAAATCACCGAACATTATTTCATCTGTCTTTTTTATAAGAAACAATAATGTCAAAATTTTAGTTCTTTTTATAAGAAACATCGAACAATTTTTAAATATATTAAATATTAAATTTCATTTGTATCTATTGATTTTAAGAGAGAATATTAAAAGTAAGTTGGTGGAGTTAATCGTAAATGATATTAGGATATTCATTAAGTAAGTTTTAATTTATAAGAGTATTAAATAAAAATAACTATATTTAAGGTTTTTTTTTAGATTCCACCATTTTTTTAGTCTCTATGATTTATGTTTTTCTTTTTAGCAAAGGTGTGATTAATGTGTTTTGTTTCTTATAAAAAGGATCGAGATGGAGTGTACTCTCTTTTAAATGAGAAGTGTTATTTCGAAGGCTTTAGCATTTAATGTTAAATAGTTAAGACAATTGAGTACCCTACAAAGAAGTCAAAGAAATCTAAGGATTGGTGCAGAAATAAGAGAATCCAATAGCAATAGCAAAAGATGGAAGTGGATAACGTATATTATCATAAGTGACTTGTAACAAAACCACAAAACAAAATATCTTGCATTACATTGCATGAACCTTTTTACTCTCTCTCCTTCCAAAGACAGAGAAAGACACCAAACAATAACAATTTGGTTGTAGCAATGGGTGTCTCTTTCCTCTCTATCTCAACTCTTCCTTCTCTCCATCCACTTGGTGGTTCTCATTATCCAAAAACAACTTCAACTAGACACCAACCTCGTTCAGTAAGTGTTTGGTTTAGTTGTCTTTATTACATATATTACAATGTCCTTTCTTAGGTGTACATAATATGTGCATTGTGAATGATGATAATATGTTTTGGAACTTTGCATTAATTTTTGACAAAAAAAATAGATAAAGTCAATGTATGTTTGGATTGACGGTTAGTTTGACAAAATCACGGTGCAGTATGGTTAGTTATACTTTAGAGCTTTAACAACATCAGTGTGTCACTGTGATTTCGTCAAACTCAGTGGTTCCAAACATTTACTCAATCAAATTGGTTACAATTGTTGCTTAGTTATCAATAATTTGAAATAACATTGGTTATGTTGTTAGGTGTCCATTTGTTGTGCTAAAATCAAGACTGATGTTAGTGATGAAGAAGAACAGTTCCATTGGAGGCGAAGAGACGTTCTTAAATGCATTGGGTTGACCATTGGTTTGGTAAGAGTCCTTATTTTGAATTGTTGGTAACAATTAACAAATGTATTTTTTGTAAAGTTGATCAACTTGTTTACTACTTTTTTTATTTAATTTTATTTCCTTATACATGTAAAATTAGTGCTGTTTGAGTTTGATAACAGACCTCTTATGCAGAGAATGAGCACTTGATAAACTTATGATGTTATTTGGGTATATTGATGTACTATGTTTAAACAATAGAGCAAAACAATTTACTGATAGAGGTTACAACATAGATTTGGCTCTCCTAAGGGATGCATTTTTTATGATAAAGTGTGGAACTTTGATCATTAATTTGAAAATCAATGGACTATATTTGAATAGATACAATGTTATGCATGTTATCTTAATCTCAACCATTGATTTTCAATCAACGGTTATGATTTCACACTTGCTTTAGAGGAACAAATCCCACTTTCTCGTAGCTTTCAGTAGCTCATCTTCTATTACCAAAAGACGATTTTGCATAATCTTGCTCAAATAAGTCTCTTGTCATAAACAAAGGGAGATTATTGAACACCAAATTTTAACACAATGCACCATCATATTTTCATCTTGATCAACCGAAAATTTGAGCTGAAGTATTAATATATAATTATCATCATTATTATTATTATTAGATATGTATTTAGTGGATAAGATTGATTTGATGATGAGTTTCGGTCAGTTGCATCTGTTTGTAGGAGTCGATATCAAGCTCTGGATTGCTCATTGGAACCGCTAATGCTGCTGACCTAATAGAACGCAGACAGCGCTCTGATTTTCAGTGTAAGATCCTTTGGTTTTACAACTCCATGTGATCATTAATCATGTCAAACTAAATGATCTTTCATTTTAGCAGAGTTCTAACTTTCTGTTCTTACAGCTCAAATTAAAGGAACACTATATACAGCAATTAAGGTATATTATGCGTACTTGCATTTACTGAATAACAGTATAAGTATTATAGTTGTGGATTATACATTTCTCTTTTCCAGCTAGAGAATAGAATTCCCAATTTGGATATGAGCTTATTCGACGTTTGATATCTCTTCAGGCAAATCCTGATCTTACTCCATCCATACTAACACTGGCTCTAAATGATGCTTTGACTTATGATAAGGTGAGAGACGTGCACTCGCATACACATACATGCATGAACAGATATCCGTCTTTCATCTTTATTGATTGGTATCTTCTTAAGTTTGTAGGAAACGAAAACGGGTGGCCCAAATGGTTCTATCCGGTTCAGGTACCTCTTCTCTTGTAATTAACATTCAAATCCAATGATGTTAACATATGTATAACCATAGATGTAGTCTTTAATTCTTTTTAGAAATGGTTAGTCTGCTAAATAATAAGGTACTCTAAGATTGTTATTGCATTCAAAATTATATCTTCTACGCCCCTCTCTCTATAGACAATAGCCAATAGGTGATGCAAAATACTAAAATTTGGTAGTTTTACTTGTCAGTATATCTTAAATTTCTGATTTTACATGCAGTTTCCTTGGAAATGAAATTTTTTCCTCTTTCTTTGCTTGTATGCATTATTTTTGCTTATCAATAATCATAATACTTTTTCTGTGTGAAGCTCAGAAATAAGTAGACCTGAAAACAAGGGGCTTTCTGGAGCCTTGAATTTTATAGAGGAAGCAAAAAAAGAGATAGATTCATATTCCAAAGGTGGACCTATTTCCTATGCAGATCTCATCCAGTATGCAGGTTGAACATTTCATCCCCTTTTTGAAACATAATAGTACTTATTAACAGTATATGTTTCACATACATATTCTAAATGTCTGTTGATTATTGTGACCATTTTTTGTCAAATCAATTTTTGATTAAAAATTGGCTAGAAGTTGTGAGGATATATTCAAATTCCACTGACTTTATTGTTTCCATTTTTATAGCACAAAGTGCAACAAAGGCTCAATTTTTAGCTTCTGCAATTCGCAAATGCGGTGGAAATGAGGAGAAAGGGAATTTACTGTACACTGCATATGGATCAAATGGACAGGTTTTCTTTTGAATTTCTGTTCTTATCCAAAACCTGGTTAATGCTAGCTCTGTCTCTAATTATAAGCCCCGTTTATATAAAAATCGCTAAATATAAACCTCATTTTAGTTATTATCAAGTGAAAAATGGATAAAGATGTGTTGTGTTGATTTATCAATAATTACACCGGATAATGTCCTACAAAAGCTTTATGAAAAGATCCATGGTTGGAAATGTTCACAAGATGTTGCTAAATAACCCTTCACTAACACGATCATGTAACACATGCAATTTTCGTTGTGGATCAGTGGGGTTTGTTCGATAGGCAATTTGGTAGGACTGATACTGACGAGGCAGATCCAGAGGGGAGAATTCCAATTTGGGAGAAAGCAAGTGTTCAGGAAATGAAAGATAAATTTTCTGCAGTAGGCTTTGGTCCTCGCCAGGTACTTCCCATATTTTATCACTATTTTTGCTCATTCTTGTCAATCGCTGATCGCAAAAAATAGTGGTTAACGGCTATTTGACAGCACTGTACTAAATAGAGGATCATGGCACAATAGCGATTTTTCAAATTTTGCTATGCTATCGCGCTATATAACAACCCTGCTCTTATTGAACAAATTGCTATTGTTTTGCGATTTACTATTTGGTACAAAATGTTGTCAAATAGTTGCACTATAACACTACTGTGTAACAGAATTTGTACAAACCGCTATTTTCTGCGATCCACGATTGACAACATTGAATGTTACTAATTATGTTCTCTGTCTATTTGGATAGCTGGCTGTGTTGTCCGCATTCATAGGTCCTGATCAGGATGCAACAGAGACCTTATTGGCATCTGATCCAGATGTTGCTCCATGGGTACAAAAATACCAACGGAGCCGTGAAACTGTCTCTCGAACCGATTATGAGGTAAGTATAACTATGTATATCTCTTTCTATACAAGAGAAGCGAAACAGTTACTGAAACTTTTGTTTGGTTAAAAAAAAAATTCACTTGGTAATTCTCTTTGGTTTGTTATCTTTCTCAGGTTGATCTGATAACCACTTTCACAAAATTGAGTACCTTGGGACAAAAAATTAACTATGAGGCATATACATATCCTCGCAAGAAGATCGACATTACCAAACTCAAGTTGTAA

Protein sequence

>MS.gene050076.t1

MQKRKLISLVLLRKLLTAAIISITFLAFFTGHLHIPSSKDHKFNDKFPTVQNLQRTQELAPPHLSKLPLSTSKLNRSRGDSDYVKLWKPPSNRGFLPCTKPTPNYTAPAESRGYLLVHTNGGLNQMRSGICDMVAVARIINATLVIPELDKRSFWQDTSNFSDVFDEEHFISSLANDVKIIKKLPIELVNETEMVKQQFRSWSGMDYYENEIAKLWEDHEVIRASKSDSRLANNNLPPDIQKLRCRACYEALRFSPRIEQIGKLLVERMRSRGPYIALHLRYEKDMLAFSGCTHDLSLDEAEELRIIRENISYWKVKDIDPIEQRSKGFCPLTPKEVGIFLTALGYPSNTPIYIAAGEIYGGESHMAELRSRYPLLMSKETLASIEELEPFFNHASQMAALDYIVSIESDVFIPSYSGNMARAVEGHRRFLGRGRSISPDRKALVRLFDKLDQGTMTEGKKLSNRIIDLHIRRLGSPRKRKGPISGTKGMDRFRSEETFYANPLPDCLCRTEPPSRNISQFVKQRKTPNNNNLVVAMGVSFLSISTLPSLHPLGGSHYPKTTSTRHQPRSVSICCAKIKTDVSDEEEQFHWRRRDVLKCIGLTIGLESISSSGLLIGTANAADLIERRQRSDFQSQIKGTLYTAIKANPDLTPSILTLALNDALTYDKETKTGGPNGSIRFSSEISRPENKGLSGALNFIEEAKKEIDSYSKGGPISYADLIQYAAQSATKAQFLASAIRKCGGNEEKGNLLYTAYGSNGQWGLFDRQFGRTDTDEADPEGRIPIWEKASVQEMKDKFSAVGFGPRQLAVLSAFIGPDQDATETLLASDPDVAPWVQKYQRSRETVSRTDYEVDLITTFTKLSTLGQKINYEAYTYPRKKIDITKLKL