AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene85318

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene85318.t1 MTR_2g044810 92.509 534 21 1 1 515 1 534 0.0 1011
MS.gene85318.t1 MTR_2g044810 83.107 515 37 4 1 515 1 465 0.0 847
MS.gene85318.t1 MTR_4g124520 66.357 538 141 6 1 515 1 521 0.0 673
MS.gene85318.t1 MTR_7g108905 41.651 545 267 10 8 511 18 552 6.23e-141 417
MS.gene85318.t1 MTR_3g010770 43.068 541 238 10 43 515 37 575 2.89e-139 414
MS.gene85318.t1 MTR_7g108900 41.431 531 249 9 38 511 31 556 1.42e-136 407
MS.gene85318.t1 MTR_2g044880 40.331 543 278 11 1 515 1 525 8.27e-135 401
MS.gene85318.t1 MTR_8g042910 57.778 315 130 1 204 515 298 612 3.41e-134 402
MS.gene85318.t1 MTR_7g108875 39.929 566 266 10 12 515 11 564 8.11e-134 399
MS.gene85318.t1 MTR_1g083520 44.071 506 237 11 45 514 32 527 3.89e-133 397
MS.gene85318.t1 MTR_7g108890 41.839 533 244 9 42 515 37 562 4.49e-132 395
MS.gene85318.t1 MTR_4g087980 43.384 461 230 7 78 515 64 516 3.02e-131 391
MS.gene85318.t1 MTR_1g008140 38.927 578 283 13 4 515 34 607 2.45e-130 392
MS.gene85318.t1 MTR_4g087970 42.449 490 233 10 67 515 36 517 3.21e-128 384
MS.gene85318.t1 MTR_7g112580 40.080 499 253 8 54 515 53 542 1.28e-127 383
MS.gene85318.t1 MTR_3g091380 37.746 559 294 10 8 515 42 597 1.20e-126 382
MS.gene85318.t1 MTR_4g025730 41.078 538 265 12 1 515 1 509 2.43e-126 379
MS.gene85318.t1 MTR_1g054880 53.079 341 148 2 178 515 227 558 7.07e-126 379
MS.gene85318.t1 MTR_1g088020 56.169 308 132 1 211 515 248 555 9.52e-126 379
MS.gene85318.t1 MTR_8g104655 39.453 512 263 9 45 515 36 541 1.43e-125 377
MS.gene85318.t1 MTR_8g023310 41.255 526 254 8 41 515 68 589 2.84e-125 379
MS.gene85318.t1 MTR_4g025690 40.381 525 274 12 10 511 1 509 9.54e-125 374
MS.gene85318.t1 MTR_1g088225 56.250 304 128 2 211 511 248 549 5.79e-122 369
MS.gene85318.t1 MTR_3g033690 40.041 492 273 11 45 515 36 526 2.85e-121 366
MS.gene85318.t1 MTR_3g008640 39.959 493 273 10 45 515 36 527 2.88e-121 366
MS.gene85318.t1 MTR_3g010780 38.507 509 276 7 40 515 70 574 2.66e-120 365
MS.gene85318.t1 MTR_3g008700 39.959 493 273 11 45 515 36 527 3.37e-120 363
MS.gene85318.t1 MTR_7g050870 38.310 509 281 7 38 515 48 554 4.82e-120 364
MS.gene85318.t1 MTR_8g104645 49.555 337 161 3 188 515 36 372 5.63e-120 357
MS.gene85318.t1 MTR_3g008720 38.593 526 295 11 12 515 8 527 1.24e-119 362
MS.gene85318.t1 MTR_4g025670 44.548 431 211 6 107 515 65 489 2.01e-119 360
MS.gene85318.t1 MTR_7g050950 40.506 474 245 6 76 515 83 553 3.05e-119 362
MS.gene85318.t1 MTR_8g042900 38.953 516 268 7 39 515 74 581 3.60e-119 362
MS.gene85318.t1 MTR_7g053360 39.157 498 270 10 45 515 36 527 4.90e-119 360
MS.gene85318.t1 MTR_7g050980 37.338 541 300 11 8 515 21 555 1.24e-118 360
MS.gene85318.t1 MTR_4g035980 39.761 503 268 11 45 515 40 539 4.13e-117 356
MS.gene85318.t1 MTR_7g112590 36.749 566 291 12 11 514 22 582 5.76e-115 352
MS.gene85318.t1 MTR_1g083510 36.155 567 294 12 11 514 21 582 6.66e-114 349
MS.gene85318.t1 MTR_0458s0030 57.795 263 111 0 253 515 52 314 5.50e-113 337
MS.gene85318.t1 MTR_1g088040 57.795 263 111 0 253 515 52 314 5.50e-113 337
MS.gene85318.t1 MTR_1g086210 37.079 534 270 10 41 514 41 568 5.19e-111 341
MS.gene85318.t1 MTR_1g083490 36.505 515 283 10 38 511 60 571 2.60e-110 340
MS.gene85318.t1 MTR_1g083470 36.571 525 269 12 38 511 55 566 3.74e-110 339
MS.gene85318.t1 MTR_1g083500 36.571 525 269 12 38 511 55 566 3.74e-110 339
MS.gene85318.t1 MTR_4g005170 34.234 555 309 11 10 511 20 571 6.93e-109 338
MS.gene85318.t1 MTR_4g005180 34.173 556 310 11 9 511 1 553 1.38e-107 332
MS.gene85318.t1 MTR_8g023150 38.417 518 268 11 39 515 75 582 9.57e-106 328
MS.gene85318.t1 MTR_7g110560 35.818 550 297 15 8 514 12 548 1.61e-104 324
MS.gene85318.t1 MTR_1g086190 35.413 545 289 14 24 514 27 562 4.52e-103 320
MS.gene85318.t1 MTR_8g104580 35.156 512 252 10 45 515 28 500 9.08e-100 310
MS.gene85318.t1 MTR_4g124550 33.457 538 308 8 22 515 62 593 6.50e-99 310
MS.gene85318.t1 MTR_7g110440 33.955 536 282 9 41 511 42 570 2.30e-97 306
MS.gene85318.t1 MTR_8g093460 35.057 522 277 14 41 514 43 550 1.06e-94 298
MS.gene85318.t1 MTR_2g044660 43.787 338 184 3 180 515 299 632 5.11e-94 299
MS.gene85318.t1 MTR_7g110490 36.111 468 229 7 107 510 108 569 1.55e-92 293
MS.gene85318.t1 MTR_7g110510 36.111 468 229 7 107 510 108 569 1.55e-92 293
MS.gene85318.t1 MTR_3g095920 34.643 560 302 15 8 514 15 563 4.56e-92 292
MS.gene85318.t1 MTR_0618s0020 53.304 227 105 1 290 515 2 228 6.36e-89 272
MS.gene85318.t1 MTR_2g436040 33.134 501 298 8 44 511 46 542 6.00e-87 280
MS.gene85318.t1 MTR_4g120280 31.731 520 302 9 41 514 59 571 2.24e-85 275
MS.gene85318.t1 MTR_4g120290 32.438 521 297 10 41 514 59 571 1.31e-84 273
MS.gene85318.t1 MTR_8g088610 41.212 330 185 6 188 511 46 372 5.13e-83 263
MS.gene85318.t1 MTR_2g436050 31.021 519 314 9 35 514 50 563 2.06e-80 261
MS.gene85318.t1 MTR_5g083620 42.444 311 176 3 207 515 47 356 9.35e-80 253
MS.gene85318.t1 MTR_7g107180 42.308 312 167 5 206 515 7 307 1.94e-79 251
MS.gene85318.t1 MTR_7g110420 34.096 481 235 9 107 511 108 582 1.40e-78 257
MS.gene85318.t1 MTR_2g105560 39.423 312 174 5 206 515 41 339 1.32e-74 239
MS.gene85318.t1 MTR_7g111560 31.250 544 322 14 8 514 27 555 2.99e-73 243
MS.gene85318.t1 MTR_7g110430 31.277 470 217 9 107 511 108 536 7.22e-70 233
MS.gene85318.t1 MTR_0458s0010 41.118 304 139 6 211 511 248 514 3.18e-66 223
MS.gene85318.t1 MTR_6g088810 36.047 344 185 9 172 504 58 377 8.19e-58 197
MS.gene85318.t1 MTR_1g086540 37.942 311 169 7 206 506 50 346 8.22e-57 193
MS.gene85318.t1 MTR_7g092780 36.334 311 177 6 206 506 90 389 8.49e-57 194
MS.gene85318.t1 MTR_8g102380 37.255 306 165 7 214 506 88 379 6.78e-56 192
MS.gene85318.t1 MTR_6g012800 35.197 304 174 4 205 498 5 295 2.29e-55 188
MS.gene85318.t1 MTR_7g011530 35.526 304 173 5 205 498 5 295 1.24e-53 184
MS.gene85318.t1 MTR_6g024165 35.061 328 181 9 195 508 29 338 5.80e-53 182
MS.gene85318.t1 MTR_7g102600 34.571 350 206 8 165 504 57 393 6.68e-52 181
MS.gene85318.t1 MTR_5g012600 31.861 317 190 6 203 507 60 362 1.01e-50 177
MS.gene85318.t1 MTR_5g095490 35.948 306 170 6 212 505 67 358 2.95e-50 176
MS.gene85318.t1 MTR_6g042660 33.688 282 164 6 202 478 33 296 7.30e-48 169
MS.gene85318.t1 MTR_8g102380 38.247 251 130 5 214 451 88 326 5.40e-47 166
MS.gene85318.t1 MTR_2g039530 37.282 287 148 8 207 482 53 318 2.15e-45 162
MS.gene85318.t1 MTR_1g033050 31.962 316 193 6 200 508 12 312 2.92e-43 156
MS.gene85318.t1 MTR_4g124740 32.051 312 179 10 204 505 52 340 3.09e-43 157
MS.gene85318.t1 MTR_5g083590 30.968 310 164 4 206 514 7 267 1.81e-42 152
MS.gene85318.t1 MTR_6g042690 33.103 290 162 7 202 479 35 304 1.90e-40 149
MS.gene85318.t1 MTR_2g033970 32.588 313 185 8 203 506 53 348 4.06e-39 145
MS.gene85318.t1 MTR_5g093970 29.938 324 213 5 182 504 19 329 7.65e-38 142
MS.gene85318.t1 MTR_4g074290 30.719 306 194 7 204 504 69 361 6.26e-37 140
MS.gene85318.t1 MTR_5g088300 31.013 316 195 7 191 504 22 316 9.25e-37 139
MS.gene85318.t1 MTR_2g073390 30.625 320 201 8 191 504 57 361 1.34e-36 139
MS.gene85318.t1 MTR_8g036225 31.488 289 173 6 202 481 29 301 4.33e-35 134
MS.gene85318.t1 MTR_0009s0350 30.686 277 176 5 204 475 69 334 1.28e-34 134
MS.gene85318.t1 MTR_0009s0340 30.686 277 176 5 204 475 69 334 1.28e-34 134
MS.gene85318.t1 MTR_5g088280 31.013 316 195 7 191 504 24 318 1.50e-34 132
MS.gene85318.t1 MTR_5g088290 30.696 316 197 7 191 504 33 328 5.32e-34 131
MS.gene85318.t1 MTR_2g436600 29.936 314 183 12 203 506 52 338 7.82e-31 122
MS.gene85318.t1 MTR_4g051810 28.889 315 204 6 191 504 22 317 4.89e-30 120
MS.gene85318.t1 MTR_6g025590 38.983 177 95 7 195 360 37 211 7.29e-27 109
MS.gene85318.t1 MTR_0408s0030 34.694 98 55 1 382 479 36 124 1.69e-16 77.0
MS.gene85318.t1 MTR_6g024200 31.875 160 88 5 346 504 137 276 4.51e-16 79.0
MS.gene85318.t1 MTR_7g102580 28.358 201 83 5 165 360 9 153 4.27e-15 73.2
MS.gene85318.t1 MTR_2g436070 22.517 302 196 7 10 277 24 321 1.74e-14 75.5
MS.gene85318.t1 MTR_7g102570 35.185 108 58 3 365 470 3 100 1.30e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene85318.t1 AT2G26440 63.938 513 149 5 39 515 35 547 0.0 665
MS.gene85318.t1 AT3G43270 43.983 482 225 6 78 515 45 525 1.37e-134 400
MS.gene85318.t1 AT4G02330 39.619 578 266 11 8 515 7 571 3.98e-134 400
MS.gene85318.t1 AT3G05620 38.545 550 274 11 15 515 7 541 5.48e-133 397
MS.gene85318.t1 AT4G02320 44.075 481 229 10 69 511 36 514 1.14e-132 395
MS.gene85318.t1 AT4G33220 48.449 419 175 4 138 515 105 523 4.38e-132 394
MS.gene85318.t1 AT3G10720 38.505 535 263 8 45 515 83 615 1.38e-127 385
MS.gene85318.t1 AT4G02300 41.187 539 264 12 8 514 14 531 4.36e-127 381
MS.gene85318.t1 AT4G33220 57.605 309 130 1 208 515 94 402 1.52e-126 375
MS.gene85318.t1 AT1G02810 54.430 316 141 1 203 515 262 577 2.46e-125 378
MS.gene85318.t1 AT3G49220 38.298 564 288 10 4 515 41 596 3.96e-125 378
MS.gene85318.t1 AT3G49220 38.298 564 288 10 4 515 86 641 1.43e-124 379
MS.gene85318.t1 AT5G04970 39.665 537 254 12 45 515 88 620 3.37e-124 377
MS.gene85318.t1 AT2G47550 42.082 461 216 5 106 515 98 558 9.65e-123 371
MS.gene85318.t1 AT5G53370 40.275 509 264 10 45 515 79 585 1.31e-122 372
MS.gene85318.t1 AT5G53370 40.275 509 264 10 45 515 115 621 2.76e-122 372
MS.gene85318.t1 AT3G60730 39.634 492 243 8 75 515 31 519 7.24e-120 362
MS.gene85318.t1 AT5G51500 41.732 508 254 12 39 511 36 536 9.76e-120 363
MS.gene85318.t1 AT5G51490 41.118 501 263 8 45 515 38 536 1.44e-119 362
MS.gene85318.t1 AT1G11580 41.913 439 226 6 103 513 118 555 2.96e-119 362
MS.gene85318.t1 AT2G43050 39.744 546 268 12 1 515 1 516 3.82e-119 360
MS.gene85318.t1 AT1G11580 41.913 439 226 6 103 513 139 576 4.38e-119 362
MS.gene85318.t1 AT1G53830 39.421 553 257 13 28 511 40 583 5.21e-119 362
MS.gene85318.t1 AT3G10710 39.645 507 261 10 40 515 69 561 5.71e-119 361
MS.gene85318.t1 AT1G23200 39.286 532 247 13 45 515 38 554 5.76e-119 361
MS.gene85318.t1 AT4G00190 41.580 481 251 11 44 511 7 470 4.50e-116 351
MS.gene85318.t1 AT2G45220 39.098 532 280 14 5 515 3 511 1.35e-115 351
MS.gene85318.t1 AT3G14310 38.148 540 263 10 41 515 59 592 3.86e-115 352
MS.gene85318.t1 AT5G27870 35.359 543 310 8 10 515 24 562 4.37e-114 354
MS.gene85318.t1 AT5G04960 37.132 509 270 8 40 512 67 561 1.12e-112 345
MS.gene85318.t1 AT3G47400 38.703 509 272 10 45 515 88 594 1.14e-111 343
MS.gene85318.t1 AT3G05610 34.307 548 313 9 10 515 23 565 3.05e-110 342
MS.gene85318.t1 AT3G10720 53.282 259 121 0 257 515 1 259 6.31e-108 322
MS.gene85318.t1 AT4G03930 47.917 336 166 3 187 515 191 524 4.27e-107 330
MS.gene85318.t1 AT3G59010 42.760 442 204 10 108 515 102 528 6.74e-107 329
MS.gene85318.t1 AT1G11590 42.361 432 217 8 112 515 97 524 2.01e-106 328
MS.gene85318.t1 AT5G49180 35.272 533 293 9 21 511 44 566 2.35e-106 329
MS.gene85318.t1 AT3G27980 44.162 394 195 7 143 515 108 497 4.10e-106 326
MS.gene85318.t1 AT1G53840 36.084 521 273 11 39 509 71 581 1.95e-104 325
MS.gene85318.t1 AT5G20860 36.949 544 294 17 10 515 6 538 5.25e-104 322
MS.gene85318.t1 AT4G33230 36.031 519 281 9 41 515 95 606 5.64e-104 324
MS.gene85318.t1 AT2G26450 35.812 511 284 11 41 515 109 611 1.12e-102 321
MS.gene85318.t1 AT3G06830 34.160 524 282 7 41 511 51 564 8.80e-98 307
MS.gene85318.t1 AT3G14300 36.417 508 275 12 39 504 457 958 6.73e-97 314
MS.gene85318.t1 AT1G11370 54.132 242 111 0 206 447 46 287 1.67e-90 279
MS.gene85318.t1 AT5G09760 35.039 508 279 14 41 503 45 546 8.86e-87 278
MS.gene85318.t1 AT5G09760 35.039 508 279 13 41 503 71 572 2.23e-86 277
MS.gene85318.t1 AT4G15980 45.130 308 168 1 206 512 392 699 7.04e-86 279
MS.gene85318.t1 AT4G15980 45.130 308 168 1 206 512 402 709 1.06e-85 279
MS.gene85318.t1 AT5G64640 33.977 518 290 11 38 508 90 602 1.07e-85 276
MS.gene85318.t1 AT5G20860 34.226 523 267 16 10 494 6 489 1.98e-84 270
MS.gene85318.t1 AT3G62170 42.308 312 176 3 207 515 278 588 8.86e-78 255
MS.gene85318.t1 AT2G47040 43.175 315 171 4 206 515 284 595 1.63e-75 249
MS.gene85318.t1 AT2G47030 41.270 315 177 4 206 515 277 588 1.61e-74 246
MS.gene85318.t1 AT1G05310 35.692 325 188 5 191 505 76 389 7.04e-57 194
MS.gene85318.t1 AT3G29090 37.261 314 171 6 204 504 5 305 8.35e-57 192
MS.gene85318.t1 AT2G36710 36.280 328 189 6 189 509 76 390 1.53e-56 194
MS.gene85318.t1 AT5G19730 36.964 303 166 6 214 505 94 382 8.17e-55 189
MS.gene85318.t1 AT5G47500 31.707 328 191 7 189 504 51 357 8.65e-50 175
MS.gene85318.t1 AT2G21610 35.197 304 174 8 205 505 50 333 8.67e-49 172
MS.gene85318.t1 AT2G21610 35.197 304 174 8 205 505 55 338 1.02e-48 172
MS.gene85318.t1 AT2G36700 33.770 305 185 4 205 504 41 333 2.14e-48 170
MS.gene85318.t1 AT3G17060 33.119 311 182 6 203 504 43 336 2.48e-47 168
MS.gene85318.t1 AT5G55590 34.395 314 180 6 204 505 80 379 3.32e-47 169
MS.gene85318.t1 AT5G07430 31.325 332 209 6 177 504 39 355 9.10e-43 156
MS.gene85318.t1 AT1G44980 44.444 189 99 1 188 370 54 242 1.53e-42 152
MS.gene85318.t1 AT3G24130 31.034 319 194 6 203 510 31 334 1.07e-41 152
MS.gene85318.t1 AT5G55590 34.733 262 147 5 204 453 80 329 1.22e-41 152
MS.gene85318.t1 AT5G18990 33.898 295 168 8 197 479 21 300 1.74e-39 146
MS.gene85318.t1 AT5G07420 30.492 305 194 5 204 504 65 355 4.41e-35 135
MS.gene85318.t1 AT5G61680 30.606 330 200 11 182 504 51 358 1.89e-34 133
MS.gene85318.t1 AT1G69940 29.503 322 204 9 189 504 51 355 2.22e-34 133
MS.gene85318.t1 AT5G07410 29.503 322 204 9 189 504 51 355 3.62e-34 132
MS.gene85318.t1 AT5G26810 31.988 322 195 7 197 504 22 333 3.74e-34 132
MS.gene85318.t1 AT2G19150 29.022 317 200 6 204 511 39 339 1.71e-31 124
MS.gene85318.t1 AT2G19150 31.373 255 152 5 204 449 39 279 1.24e-28 115
MS.gene85318.t1 AT2G47280 28.387 310 194 7 206 504 35 327 5.11e-28 114
MS.gene85318.t1 AT3G49220 29.110 292 154 9 45 294 136 416 1.32e-23 103
MS.gene85318.t1 AT2G47670 32.414 145 88 3 28 163 31 174 3.46e-13 69.3

Find 77 sgRNAs with CRISPR-Local

Find 159 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTAACCATACTATTATT+TGG 0.153297 2.4:+45597788 None:intergenic
GGGACAATAGATTTCATATT+TGG 0.171421 2.4:-45596304 MS.gene85318:CDS
TATGGTGAATATGAAAATTA+TGG 0.192417 2.4:-45595977 MS.gene85318:CDS
GATGGTCTTGATTCTGCTTC+TGG 0.229635 2.4:-45598058 MS.gene85318:CDS
TGGATTTATGTTTATAGATA+TGG 0.236097 2.4:+45598342 None:intergenic
TAGCTATAATCGAACAGTTT+TGG 0.260694 2.4:+45596161 None:intergenic
ATCGTGAATGCGACATTTAC+GGG 0.270851 2.4:-45596324 MS.gene85318:CDS
AGTGTTTCTGAGTTTATTAT+TGG 0.272877 2.4:-45595878 MS.gene85318:CDS
ATGAGTTGAAACAAAGTTTA+GGG 0.273837 2.4:+45598374 None:intergenic
AATGAGTTGAAACAAAGTTT+AGG 0.277122 2.4:+45598373 None:intergenic
AGAAGGAAGTTTATGATGTT+TGG 0.293554 2.4:+45598322 None:intergenic
TTTGTTCGAGGAACGGATTC+CGG 0.293719 2.4:+45598144 None:intergenic
ATTCGAGAGCTTTGTGGTTT+CGG 0.296888 2.4:+45598276 None:intergenic
CTTTGCTCCAAATAATAGTA+TGG 0.303668 2.4:-45597795 MS.gene85318:CDS
TATCGTGAATGCGACATTTA+CGG 0.305696 2.4:-45596325 MS.gene85318:CDS
ACTTTCAGATCTGCAACTTT+AGG 0.311138 2.4:-45597629 MS.gene85318:intron
ATAATAGAATTCACAAGAAC+TGG 0.361337 2.4:+45598025 None:intergenic
ATCAAAAGGGTTGGACAAAA+TGG 0.362950 2.4:-45596030 MS.gene85318:CDS
GATACAACTAGCATTTCATT+TGG 0.363269 2.4:+45597863 None:intergenic
ATGGGTTGGTTATCATTTGA+TGG 0.392958 2.4:-45595924 MS.gene85318:CDS
GAAATACCCGTGTCTTCATC+GGG 0.395168 2.4:+45596187 None:intergenic
GCAACTGCTTGATGTTTCTC+TGG 0.415712 2.4:+45596439 None:intergenic
ATAGTTATTTATGTTAAAGA+AGG 0.415960 2.4:-45597767 MS.gene85318:CDS
AGTTTATTATTGGTGATCAA+TGG 0.423850 2.4:-45595868 MS.gene85318:CDS
ACTTCAGTTCCTTATGATGA+TGG 0.435256 2.4:-45595836 MS.gene85318:CDS
AGATTGATAATCGTGTTGAA+TGG 0.440086 2.4:-45595943 MS.gene85318:CDS
GCTTTATTCGAACTCTAGTA+AGG 0.443625 2.4:-45596131 MS.gene85318:CDS
ATGGTCAAATGATCAAGGTT+TGG 0.447423 2.4:-45596011 MS.gene85318:CDS
TGATGAGGTTGTGGATGTGT+TGG 0.468004 2.4:+45598450 None:intergenic
ACAAAATGGTCAAATGATCA+AGG 0.474989 2.4:-45596016 MS.gene85318:CDS
TATCAAATTCCATCATCATA+AGG 0.481002 2.4:+45595827 None:intergenic
TTGAAACAAAGTTTAGGGTA+TGG 0.481564 2.4:+45598379 None:intergenic
CTAGTTGAAGTGAATGAAGA+AGG 0.483535 2.4:+45598305 None:intergenic
GTTGTATCTGCAGATGGAAG+TGG 0.497219 2.4:-45597848 MS.gene85318:CDS
GGTAATAGAAGTGTTGTTGA+TGG 0.501117 2.4:-45597659 MS.gene85318:CDS
GAGGTAGTGTGAGTGAGAAG+AGG 0.501576 2.4:+45598479 None:intergenic
AGAAGAGGATTGTAAAGAGA+AGG 0.502018 2.4:+45598494 None:intergenic
ACAGTAAATTGACCAGGTAA+TGG 0.502697 2.4:+45596235 None:intergenic
GGTATTGAATGATGAGGTTG+TGG 0.502841 2.4:+45598441 None:intergenic
TGAAATACCCGTGTCTTCAT+CGG 0.505205 2.4:+45596186 None:intergenic
AGTAAGGTCAAGAGTTACCT+TGG 0.505459 2.4:-45596115 MS.gene85318:CDS
GATTGATAATCGTGTTGAAT+GGG 0.506162 2.4:-45595942 MS.gene85318:CDS
GAAAAGATTCGAGAGCTTTG+TGG 0.507303 2.4:+45598270 None:intergenic
TCATTGAAAAGATCGTTATC+CGG 0.521388 2.4:-45598163 MS.gene85318:CDS
AAAACTAACATTGTGATGCT+TGG 0.522551 2.4:-45597710 MS.gene85318:CDS
TAGTTATTTATGTTAAAGAA+GGG 0.523866 2.4:-45597766 MS.gene85318:CDS
GTAAGGTCAAGAGTTACCTT+GGG 0.536463 2.4:-45596114 MS.gene85318:CDS
CGATTATCAATCTTTGAACC+AGG 0.546156 2.4:+45595953 None:intergenic
AGAGTTACCTTGGGAGGCCA+TGG 0.549483 2.4:-45596105 MS.gene85318:CDS
GTGGATGTGTTGGTTTGAAG+AGG 0.568685 2.4:+45598460 None:intergenic
GATAATCGTGTTGAATGGGT+TGG 0.569200 2.4:-45595938 MS.gene85318:CDS
AACATTGTGATGCTTGGTGA+TGG 0.570666 2.4:-45597704 MS.gene85318:CDS
TAAAGTTGCAGATCTGAAAG+TGG 0.573525 2.4:+45597631 None:intergenic
TGTTGGTTAGGGCTGCACTA+AGG 0.574967 2.4:+45598095 None:intergenic
ATAGCATTTGAGAACAGAGC+TGG 0.580889 2.4:-45596463 MS.gene85318:CDS
ATAGAAGTGTTGTTGATGGA+TGG 0.582279 2.4:-45597655 MS.gene85318:CDS
TTACCTTGGGAGGCCATGGA+GGG 0.584141 2.4:-45596101 MS.gene85318:CDS
AGTGAACATAAAGTGTGTCT+TGG 0.595293 2.4:+45596362 None:intergenic
GATGATGAGTTTGTGAGATG+AGG 0.596471 2.4:+45598516 None:intergenic
ATGCTAGTTGTATCTGCAGA+TGG 0.599555 2.4:-45597854 MS.gene85318:CDS
GTATCAAGAATGCCATTACC+TGG 0.603055 2.4:-45596247 MS.gene85318:CDS
AAACCCTCCATGGCCTCCCA+AGG 0.605902 2.4:+45596098 None:intergenic
AGTGATTCTACTGTGATCAC+TGG 0.609593 2.4:-45597680 MS.gene85318:CDS
AGATAACCCCGATGAAGACA+CGG 0.613033 2.4:-45596194 MS.gene85318:CDS
AAACTGTTCGATTATAGCTA+CGG 0.613192 2.4:-45596158 MS.gene85318:CDS
GTTACCTTGGGAGGCCATGG+AGG 0.620460 2.4:-45596102 MS.gene85318:CDS
TATTCGATGTTCCAACGTCG+TGG 0.623832 2.4:+45598248 None:intergenic
AGGTCAAGAGTTACCTTGGG+AGG 0.624790 2.4:-45596111 MS.gene85318:CDS
TTTGTTGGTATTGAATGATG+AGG 0.627640 2.4:+45598435 None:intergenic
AGGATCAATTCAAGACTGCA+AGG 0.641298 2.4:-45598209 MS.gene85318:CDS
GAATATGAAAATTATGGACC+TGG 0.647894 2.4:-45595971 MS.gene85318:CDS
GGGGTTATCTCGTGATTGCG+CGG 0.653348 2.4:+45596207 None:intergenic
GTTATAACAGTAAATTGACC+AGG 0.661499 2.4:+45596229 None:intergenic
GATAACCCCGATGAAGACAC+GGG 0.662485 2.4:-45596193 MS.gene85318:CDS
GCATTCTTGTAATACTACTG+CGG 0.701105 2.4:+45596276 None:intergenic
AAATACCCGTGTCTTCATCG+GGG 0.731092 2.4:+45596188 None:intergenic
AATATCGTAGAGAAACAACG+AGG 0.837126 2.4:-45598229 MS.gene85318:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTATAATATGAAAAGA+GGG + chr2.4:45597258-45597277 None:intergenic 10.0%
!! TAAAATTATAATATGAAAAG+AGG + chr2.4:45597259-45597278 None:intergenic 10.0%
!!! CTTTTCATATTATAATTTTA+TGG - chr2.4:45597259-45597278 MS.gene85318:intron 10.0%
!!! TTAAACTAATTCTTAAATTT+TGG - chr2.4:45597173-45597192 MS.gene85318:intron 10.0%
!!! TTTTAAAATTGATTTTGTTT+TGG - chr2.4:45596910-45596929 MS.gene85318:intron 10.0%
!! ATAGTTATTTATGTTAAAGA+AGG - chr2.4:45596585-45596604 MS.gene85318:intron 15.0%
!! TAGTTAAAAAAAATTGTCTT+TGG - chr2.4:45597037-45597056 MS.gene85318:intron 15.0%
!! TAGTTATTTATGTTAAAGAA+GGG - chr2.4:45596586-45596605 MS.gene85318:intron 15.0%
!!! AACATTTTCCTAATTTTATT+TGG - chr2.4:45597454-45597473 MS.gene85318:intron 15.0%
!!! ACATTTTCCTAATTTTATTT+GGG - chr2.4:45597455-45597474 MS.gene85318:intron 15.0%
!!! TAATTCTTAAATTTTGGTTT+AGG - chr2.4:45597179-45597198 MS.gene85318:intron 15.0%
!! ACAAATACAATCTTAGAATT+TGG - chr2.4:45597504-45597523 MS.gene85318:intron 20.0%
!! ATTCTAACCATACTATTATT+TGG + chr2.4:45596567-45596586 None:intergenic 20.0%
!! CAAATACAATCTTAGAATTT+GGG - chr2.4:45597505-45597524 MS.gene85318:intron 20.0%
!! CATATAAATTTCTTCATTTC+AGG - chr2.4:45597073-45597092 MS.gene85318:intron 20.0%
!! TATGGTGAATATGAAAATTA+TGG - chr2.4:45598375-45598394 MS.gene85318:CDS 20.0%
!! TGGATTTATGTTTATAGATA+TGG + chr2.4:45596013-45596032 None:intergenic 20.0%
!!! AATATAGATGTTTTATGCTT+AGG - chr2.4:45596953-45596972 MS.gene85318:intron 20.0%
!!! ACAATGTTAGTTTTATAACT+TGG + chr2.4:45596636-45596655 None:intergenic 20.0%
!!! CAAAAGTAAAAGTTTTTTCT+TGG + chr2.4:45597402-45597421 None:intergenic 20.0%
!!! CAAGAAAAAACTTTTACTTT+TGG - chr2.4:45597400-45597419 MS.gene85318:intron 20.0%
!!! CATTTTCCTAATTTTATTTG+GGG - chr2.4:45597456-45597475 MS.gene85318:intron 20.0%
!!! GATGATTTTATTGATCAAAA+GGG - chr2.4:45598309-45598328 MS.gene85318:CDS 20.0%
!!! TGATGATTTTATTGATCAAA+AGG - chr2.4:45598308-45598327 MS.gene85318:CDS 20.0%
!!! TGTTTTGCATAAAGATTTTA+AGG + chr2.4:45595950-45595969 None:intergenic 20.0%
!!! TTTTACAAATGTGCAATTTA+TGG - chr2.4:45597964-45597983 MS.gene85318:intron 20.0%
! AAAAATCAACTTCTCCAAAA+TGG - chr2.4:45596433-45596452 MS.gene85318:CDS 25.0%
! AAAAGACAAACCAAGAAAAA+AGG + chr2.4:45596765-45596784 None:intergenic 25.0%
! AAAGACAAACCAAGAAAAAA+GGG + chr2.4:45596764-45596783 None:intergenic 25.0%
! AACAAAAACACATGTTTAGA+TGG - chr2.4:45596276-45596295 MS.gene85318:CDS 25.0%
! ACATGGTACACTAATTTATT+TGG + chr2.4:45597789-45597808 None:intergenic 25.0%
! ACTAATTTCATACTATGGAT+TGG - chr2.4:45597689-45597708 MS.gene85318:CDS 25.0%
! ACTTACCATCAAATAAAGAT+TGG + chr2.4:45596998-45597017 None:intergenic 25.0%
! ATAATAGAATTCACAAGAAC+TGG + chr2.4:45596330-45596349 None:intergenic 25.0%
! CTTACCATCAAATAAAGATT+GGG + chr2.4:45596997-45597016 None:intergenic 25.0%
! GAGTAACTAATTTCATACTA+TGG - chr2.4:45597684-45597703 MS.gene85318:CDS 25.0%
! GTTAATCCCCAAATAAAATT+AGG + chr2.4:45597465-45597484 None:intergenic 25.0%
! GTTATCAAAAAGCTTAGATT+TGG - chr2.4:45596455-45596474 MS.gene85318:CDS 25.0%
! TCAATAATAATGTTCACAAC+TGG - chr2.4:45597634-45597653 MS.gene85318:CDS 25.0%
!! AAAGTTGGATTTTTGTCATT+TGG - chr2.4:45597725-45597744 MS.gene85318:CDS 25.0%
!! AATATGAAAAGAGGGTATAT+TGG + chr2.4:45597250-45597269 None:intergenic 25.0%
!! AATCTTTATTTGATGGTAAG+TGG - chr2.4:45596997-45597016 MS.gene85318:intron 25.0%
!! AATGAGTTGAAACAAAGTTT+AGG + chr2.4:45595982-45596001 None:intergenic 25.0%
!! AGTGTTTCTGAGTTTATTAT+TGG - chr2.4:45598474-45598493 MS.gene85318:CDS 25.0%
!! AGTTTATTATTGGTGATCAA+TGG - chr2.4:45598484-45598503 MS.gene85318:CDS 25.0%
!! ATGAGTTGAAACAAAGTTTA+GGG + chr2.4:45595981-45596000 None:intergenic 25.0%
!! ATTTTATTGATCAAAAGGGT+TGG - chr2.4:45598313-45598332 MS.gene85318:CDS 25.0%
!! CATCCTTTATTAACCTTTTT+CGG - chr2.4:45597576-45597595 MS.gene85318:intron 25.0%
!! GTTGTTATCTCTTTTCAATT+TGG - chr2.4:45597598-45597617 MS.gene85318:intron 25.0%
!! TTTTGGTCAAACATTATTTC+AGG - chr2.4:45597104-45597123 MS.gene85318:intron 25.0%
!!! AAGCTTTTTGATAACCATTT+TGG + chr2.4:45596450-45596469 None:intergenic 25.0%
!!! AAGTTGGATTTTTGTCATTT+GGG - chr2.4:45597726-45597745 MS.gene85318:CDS 25.0%
!!! ATCTAAACATGTGTTTTTGT+TGG + chr2.4:45596277-45596296 None:intergenic 25.0%
AAAACTAACATTGTGATGCT+TGG - chr2.4:45596642-45596661 MS.gene85318:intron 30.0%
AAACTGTTCGATTATAGCTA+CGG - chr2.4:45598194-45598213 MS.gene85318:CDS 30.0%
AAAGAGATAACAACCGAAAA+AGG + chr2.4:45597592-45597611 None:intergenic 30.0%
ACAAAATGGTCAAATGATCA+AGG - chr2.4:45598336-45598355 MS.gene85318:CDS 30.0%
AGAAGGAAGTTTATGATGTT+TGG + chr2.4:45596033-45596052 None:intergenic 30.0%
CAACCGAAAAAGGTTAATAA+AGG + chr2.4:45597582-45597601 None:intergenic 30.0%
CTTTGCTCCAAATAATAGTA+TGG - chr2.4:45596557-45596576 MS.gene85318:intron 30.0%
GAATATGAAAATTATGGACC+TGG - chr2.4:45598381-45598400 MS.gene85318:CDS 30.0%
GATACAACTAGCATTTCATT+TGG + chr2.4:45596492-45596511 None:intergenic 30.0%
GGGACAATAGATTTCATATT+TGG - chr2.4:45598048-45598067 MS.gene85318:CDS 30.0%
GGTGACATTACAATAAAAGT+TGG - chr2.4:45597710-45597729 MS.gene85318:CDS 30.0%
GTTATAACAGTAAATTGACC+AGG + chr2.4:45598126-45598145 None:intergenic 30.0%
TATTTGTGTCTATCCAAGAT+AGG + chr2.4:45597491-45597510 None:intergenic 30.0%
TCATTGAAAAGATCGTTATC+CGG - chr2.4:45596189-45596208 MS.gene85318:CDS 30.0%
! AGATTGATAATCGTGTTGAA+TGG - chr2.4:45598409-45598428 MS.gene85318:CDS 30.0%
! ATCTCTTTTCAATTTGGACT+TGG - chr2.4:45597604-45597623 MS.gene85318:intron 30.0%
! GATTGATAATCGTGTTGAAT+GGG - chr2.4:45598410-45598429 MS.gene85318:CDS 30.0%
! GTTTCCCAATCTTTATTTGA+TGG - chr2.4:45596990-45597009 MS.gene85318:intron 30.0%
! TAGCTATAATCGAACAGTTT+TGG + chr2.4:45598194-45598213 None:intergenic 30.0%
! TTGAAACAAAGTTTAGGGTA+TGG + chr2.4:45595976-45595995 None:intergenic 30.0%
! TTTGTTGGTATTGAATGATG+AGG + chr2.4:45595920-45595939 None:intergenic 30.0%
! TTTTCTTCACCCTTTTTTCT+TGG - chr2.4:45596752-45596771 MS.gene85318:intron 30.0%
!! AAAATGTTAACTTGTGACCT+TGG + chr2.4:45597442-45597461 None:intergenic 30.0%
!! AAATGTTAACTTGTGACCTT+GGG + chr2.4:45597441-45597460 None:intergenic 30.0%
!! AACATGTGTTTTTGTTGGTT+AGG + chr2.4:45596272-45596291 None:intergenic 30.0%
!! ACATGTGTTTTTGTTGGTTA+GGG + chr2.4:45596271-45596290 None:intergenic 30.0%
!! GGTTTGGATACATTGTTTTA+TGG - chr2.4:45598357-45598376 MS.gene85318:CDS 30.0%
!! TTTCATTTTTCAGCTGTATC+TGG - chr2.4:45597844-45597863 MS.gene85318:CDS 30.0%
!! TTTGGTTTAGGTTTTTCACA+AGG - chr2.4:45597191-45597210 MS.gene85318:intron 30.0%
!!! CATTTCAGGCTAATTTGTTT+TGG - chr2.4:45597087-45597106 MS.gene85318:intron 30.0%
!!! TTGTAACCCTTTTGATTTGA+AGG + chr2.4:45596411-45596430 None:intergenic 30.0%
!!! TTTTAAGGTAGTGAGTTTGT+TGG + chr2.4:45595935-45595954 None:intergenic 30.0%
AATATCGTAGAGAAACAACG+AGG - chr2.4:45596123-45596142 MS.gene85318:CDS 35.0%
ACAAAGCACAGAAAAATCCA+AGG + chr2.4:45596792-45596811 None:intergenic 35.0%
ACAGTAAATTGACCAGGTAA+TGG + chr2.4:45598120-45598139 None:intergenic 35.0%
ACTTCAGTTCCTTATGATGA+TGG - chr2.4:45598516-45598535 MS.gene85318:CDS 35.0%
ACTTTCAGATCTGCAACTTT+AGG - chr2.4:45596723-45596742 MS.gene85318:intron 35.0%
AGAAGAGGATTGTAAAGAGA+AGG + chr2.4:45595861-45595880 None:intergenic 35.0%
AGTGAACATAAAGTGTGTCT+TGG + chr2.4:45597993-45598012 None:intergenic 35.0%
ATCAAAAGGGTTGGACAAAA+TGG - chr2.4:45598322-45598341 MS.gene85318:CDS 35.0%
ATGGTCAAATGATCAAGGTT+TGG - chr2.4:45598341-45598360 MS.gene85318:CDS 35.0%
CGATTATCAATCTTTGAACC+AGG + chr2.4:45598402-45598421 None:intergenic 35.0%
CTAGTTGAAGTGAATGAAGA+AGG + chr2.4:45596050-45596069 None:intergenic 35.0%
GCATTCTTGTAATACTACTG+CGG + chr2.4:45598079-45598098 None:intergenic 35.0%
TAAAGTTGCAGATCTGAAAG+TGG + chr2.4:45596724-45596743 None:intergenic 35.0%
TATCGTGAATGCGACATTTA+CGG - chr2.4:45598027-45598046 MS.gene85318:CDS 35.0%
TGACTGTCAAATTGGAAACA+TGG + chr2.4:45597806-45597825 None:intergenic 35.0%
TTATCACGTGACTGTCAAAT+TGG + chr2.4:45597814-45597833 None:intergenic 35.0%
! AGCTATGTTTCTTTTGTTCG+AGG + chr2.4:45596223-45596242 None:intergenic 35.0%
! GCTTTATTCGAACTCTAGTA+AGG - chr2.4:45598221-45598240 MS.gene85318:CDS 35.0%
! TGTTTCTTTTGTTCGAGGAA+CGG + chr2.4:45596218-45596237 None:intergenic 35.0%
!! AATGTTAACTTGTGACCTTG+GGG + chr2.4:45597440-45597459 None:intergenic 35.0%
!! ATAGAAGTGTTGTTGATGGA+TGG - chr2.4:45596697-45596716 MS.gene85318:intron 35.0%
!! ATGGGTTGGTTATCATTTGA+TGG - chr2.4:45598428-45598447 MS.gene85318:CDS 35.0%
!! GGTAATAGAAGTGTTGTTGA+TGG - chr2.4:45596693-45596712 MS.gene85318:intron 35.0%
!! TGGTTTGTCTTTTACTTCCT+TGG - chr2.4:45596772-45596791 MS.gene85318:intron 35.0%
ACCTGAGCCTTCAAATCAAA+AGG - chr2.4:45596401-45596420 MS.gene85318:CDS 40.0%
AGGATCAATTCAAGACTGCA+AGG - chr2.4:45596143-45596162 MS.gene85318:CDS 40.0%
AGTAAGGTCAAGAGTTACCT+TGG - chr2.4:45598237-45598256 MS.gene85318:CDS 40.0%
AGTGATTCTACTGTGATCAC+TGG - chr2.4:45596672-45596691 MS.gene85318:intron 40.0%
ATAGCATTTGAGAACAGAGC+TGG - chr2.4:45597889-45597908 MS.gene85318:CDS 40.0%
ATCGTGAATGCGACATTTAC+GGG - chr2.4:45598028-45598047 MS.gene85318:CDS 40.0%
ATGCTAGTTGTATCTGCAGA+TGG - chr2.4:45596498-45596517 MS.gene85318:CDS 40.0%
CCTGAGCCTTCAAATCAAAA+GGG - chr2.4:45596402-45596421 MS.gene85318:CDS 40.0%
GAAAAGATTCGAGAGCTTTG+TGG + chr2.4:45596085-45596104 None:intergenic 40.0%
GAATCTGACTCACTGAACAA+TGG + chr2.4:45597757-45597776 None:intergenic 40.0%
GATAATCGTGTTGAATGGGT+TGG - chr2.4:45598414-45598433 MS.gene85318:CDS 40.0%
GATGATGAGTTTGTGAGATG+AGG + chr2.4:45595839-45595858 None:intergenic 40.0%
GTAAGGTCAAGAGTTACCTT+GGG - chr2.4:45598238-45598257 MS.gene85318:CDS 40.0%
GTATCAAGAATGCCATTACC+TGG - chr2.4:45598105-45598124 MS.gene85318:CDS 40.0%
TGAAATACCCGTGTCTTCAT+CGG + chr2.4:45598169-45598188 None:intergenic 40.0%
! AACATTGTGATGCTTGGTGA+TGG - chr2.4:45596648-45596667 MS.gene85318:intron 40.0%
! ATTCGAGAGCTTTGTGGTTT+CGG + chr2.4:45596079-45596098 None:intergenic 40.0%
! GGTATTGAATGATGAGGTTG+TGG + chr2.4:45595914-45595933 None:intergenic 40.0%
! TTTTCAGCTGTATCTGGAGA+TGG - chr2.4:45597850-45597869 MS.gene85318:CDS 40.0%
!! CATGTTAACTTGTGCCCTTA+GGG - chr2.4:45597284-45597303 MS.gene85318:intron 40.0%
!! GTTCTAGAAAAAACCCTCCA+TGG + chr2.4:45598267-45598286 None:intergenic 40.0%
!! TCATGTTAACTTGTGCCCTT+AGG - chr2.4:45597283-45597302 MS.gene85318:intron 40.0%
!! TTCCTTAACTTGTGCCCTAA+GGG + chr2.4:45597301-45597320 None:intergenic 40.0%
AAATACCCGTGTCTTCATCG+GGG + chr2.4:45598167-45598186 None:intergenic 45.0%
AGATAACCCCGATGAAGACA+CGG - chr2.4:45598158-45598177 MS.gene85318:CDS 45.0%
GAAATACCCGTGTCTTCATC+GGG + chr2.4:45598168-45598187 None:intergenic 45.0%
GCAACTGCTTGATGTTTCTC+TGG + chr2.4:45597916-45597935 None:intergenic 45.0%
GGGGATTAACTCACCTATCT+TGG - chr2.4:45597475-45597494 MS.gene85318:intron 45.0%
GTTCCTTAACTTATGCCCCA+AGG - chr2.4:45597422-45597441 MS.gene85318:intron 45.0%
GTTGTATCTGCAGATGGAAG+TGG - chr2.4:45596504-45596523 MS.gene85318:intron 45.0%
TATTCGATGTTCCAACGTCG+TGG + chr2.4:45596107-45596126 None:intergenic 45.0%
TGACCTTGGGGCATAAGTTA+AGG + chr2.4:45597428-45597447 None:intergenic 45.0%
TGATGAGGTTGTGGATGTGT+TGG + chr2.4:45595905-45595924 None:intergenic 45.0%
! GATGGTCTTGATTCTGCTTC+TGG - chr2.4:45596294-45596313 MS.gene85318:CDS 45.0%
! TCGAATCTTTTCCACGACGT+TGG - chr2.4:45596093-45596112 MS.gene85318:CDS 45.0%
! TTTGTTCGAGGAACGGATTC+CGG + chr2.4:45596211-45596230 None:intergenic 45.0%
!! GTGGATGTGTTGGTTTGAAG+AGG + chr2.4:45595895-45595914 None:intergenic 45.0%
!! GTTCCTTAACTTGTGCCCTA+AGG + chr2.4:45597302-45597321 None:intergenic 45.0%
!!! CCCTTTTGATTTGAAGGCTC+AGG + chr2.4:45596405-45596424 None:intergenic 45.0%
!!! TTTTCATATTATAATTTTAT+GGG - chr2.4:45597260-45597279 MS.gene85318:intron 5.0%
AGGTCAAGAGTTACCTTGGG+AGG - chr2.4:45598241-45598260 MS.gene85318:CDS 50.0%
GAGGTAGTGTGAGTGAGAAG+AGG + chr2.4:45595876-45595895 None:intergenic 50.0%
GATAACCCCGATGAAGACAC+GGG - chr2.4:45598159-45598178 MS.gene85318:CDS 50.0%
TGCCCTTAGGGCACAAGTTA+AGG - chr2.4:45597296-45597315 MS.gene85318:intron 50.0%
! TGTTGGTTAGGGCTGCACTA+AGG + chr2.4:45596260-45596279 None:intergenic 50.0%
AGAGTTACCTTGGGAGGCCA+TGG - chr2.4:45598247-45598266 MS.gene85318:CDS 55.0%
GGGGTTATCTCGTGATTGCG+CGG + chr2.4:45598148-45598167 None:intergenic 55.0%
TTACCTTGGGAGGCCATGGA+GGG - chr2.4:45598251-45598270 MS.gene85318:CDS 55.0%
AAACCCTCCATGGCCTCCCA+AGG + chr2.4:45598257-45598276 None:intergenic 60.0%
GTTACCTTGGGAGGCCATGG+AGG - chr2.4:45598250-45598269 MS.gene85318:CDS 60.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 45595829 45598545 45595829 ID=MS.gene85318
chr2.4 mRNA 45595829 45598545 45595829 ID=MS.gene85318.t1;Parent=MS.gene85318
chr2.4 exon 45598009 45598545 45598009 ID=MS.gene85318.t1.exon1;Parent=MS.gene85318.t1
chr2.4 CDS 45598009 45598545 45598009 ID=cds.MS.gene85318.t1;Parent=MS.gene85318.t1
chr2.4 exon 45597630 45597951 45597630 ID=MS.gene85318.t1.exon2;Parent=MS.gene85318.t1
chr2.4 CDS 45597630 45597951 45597630 ID=cds.MS.gene85318.t1;Parent=MS.gene85318.t1
chr2.4 exon 45595829 45596517 45595829 ID=MS.gene85318.t1.exon3;Parent=MS.gene85318.t1
chr2.4 CDS 45595829 45596517 45595829 ID=cds.MS.gene85318.t1;Parent=MS.gene85318.t1
Gene Sequence

>MS.gene85318

ATGGCTTCCTCATCTCACAAACTCATCATCCTTCTCTTTACAATCCTCTTCTCACTCACACTACCTCTTCAAACCAACACATCCACAACCTCATCATTCAATACCAACAAACTCACTACCTTAAAATCTTTATGCAAAACAACACCATACCCTAAACTTTGTTTCAACTCATTAAAACTTTCCATATCTATAAACATAAATCCAAACATCATAAACTTCCTTCTTCATTCACTTCAACTAGCAATATCCGAAACCACAAAGCTCTCGAATCTTTTCCACGACGTTGGAACATCGAATATCGTAGAGAAACAACGAGGATCAATTCAAGACTGCAAGGAACTTCATCAATCAACGTTAACTTCATTGAAAAGATCGTTATCCGGAATCCGTTCCTCGAACAAAAGAAACATAGCTGATGCTAGAATCTACCTTAGTGCAGCCCTAACCAACAAAAACACATGTTTAGATGGTCTTGATTCTGCTTCTGGTACATATAAACCAGTTCTTGTGAATTCTATTATTAACACTTACAAACATGTAAGTAACTCTCTTTCTATGCTTTCTAATCATGCACCTGAGCCTTCAAATCAAAAGGGTTACAAGAAAAAATCAACTTCTCCAAAATGGTTATCAAAAAGCTTAGATTTGGATGAATATGATCCAAATGAAATGCTAGTTGTATCTGCAGATGGAAGTGGAAACTTTAGCACTATTAATGATGCTATAAACTTTGCTCCAAATAATAGTATGGTTAGAATAGTTATTTATGTTAAAGAAGGGTATTATGATGAAAATGTTGAAATACCAAGTTATAAAACTAACATTGTGATGCTTGGTGATGGAAGTGATTCTACTGTGATCACTGGTAATAGAAGTGTTGTTGATGGATGGACCACTTTCAGATCTGCAACTTTAGGTGAAGTTTTTCTTCACCCTTTTTTCTTGGTTTGTCTTTTACTTCCTTGGATTTTTCTGTGCTTTGTCTTTTAAAAAAGAATAAGTGTAGCTGATGCAATAGATTCTACAATATTAAATTAAATTTGTCAATGAACTAATTATAGTGTGTTTGATTTCACAAGAGTTTTAAAATTGATTTTGTTTTGGATCTTATGTGATTTTAACAAAATATAGATGTTTTATGCTTAGGACAGAAATCATTTTGTTTCCCAATCTTTATTTGATGGTAAGTGGTAAAATTAATTTGTGTCTAGTTAAAAAAAATTGTCTTTGGAACATAAAATCAACATATAAATTTCTTCATTTCAGGCTAATTTGTTTTGGTCAAACATTATTTCAGGCTAACTTTATTCAAATCAATTTCAATGAAATTATTATTATTTTTTTTTAAACTAATTCTTAAATTTTGGTTTAGGTTTTTCACAAGGTTGATCTCTTTTTAATGTGAGATTTGAGTTTTTCCAATATACCCTCTTTTCATATTATAATTTTATGGGTCATGTTAACTTGTGCCCTTAGGGCACAAGTTAAGGAACTTAAAATAGAAATAAGTAATAAATTTTATGTTGAAAATATAACTTTTGAAACTTTCAAGACATTAAATGCACAATTTCCAAGAAAAAACTTTTACTTTTGGTTCCTTAACTTATGCCCCAAGGTCACAAGTTAACATTTTCCTAATTTTATTTGGGGATTAACTCACCTATCTTGGATAGACACAAATACAATCTTAGAATTTGGGTTGTGTTCAGCGCAACGCTAAAGAATCAATTCGTAACACGAGAAATGTCATCCTTTATTAACCTTTTTCGGTTGTTATCTCTTTTCAATTTGGACTTGGATTTTTATCAATAATAATGTTCACAACTGGTTAAAAAAAAAAAAAACTAAAGATTATGAGTAACTAATTTCATACTATGGATTGGTGACATTACAATAAAAGTTGGATTTTTGTCATTTGGGATACTCCATTGTTCAGTGAGTCAGATTCTTAATTTTTCCAAATAAATTAGTGTACCATGTTTCCAATTTGACAGTCACGTGATAATAAATGCTTATTTCATTTTTCAGCTGTATCTGGAGATGGATTTCTTGCAAGAGACATAGCATTTGAGAACAGAGCTGGACCAGAGAAACATCAAGCAGTTGCATTAAGAGTAAATGCAGATTTAACAGCATTTTACAAATGTGCAATTTATGGTTACCAAGACACACTTTATGTTCACTCATTTAGACAATTCTATCGTGAATGCGACATTTACGGGACAATAGATTTCATATTTGGTAACGCCGCAGTAGTATTACAAGAATGCGACATCGTATCAAGAATGCCATTACCTGGTCAATTTACTGTTATAACCGCGCAATCACGAGATAACCCCGATGAAGACACGGGTATTTCAATCCAAAACTGTTCGATTATAGCTACGGACGAGCTTTATTCGAACTCTAGTAAGGTCAAGAGTTACCTTGGGAGGCCATGGAGGGTTTTTTCTAGAACAGTTTTTATTGAGTCTTATATTGATGATTTTATTGATCAAAAGGGTTGGACAAAATGGTCAAATGATCAAGGTTTGGATACATTGTTTTATGGTGAATATGAAAATTATGGACCTGGTTCAAAGATTGATAATCGTGTTGAATGGGTTGGTTATCATTTGATGGATTATAATGATGCTTATAATTTCAGTGTTTCTGAGTTTATTATTGGTGATCAATGGCTTGAGTCTACTTCAGTTCCTTATGATGATGGAATTTGA
Protein sequence

>MS.gene85318.t1

MASSSHKLIILLFTILFSLTLPLQTNTSTTSSFNTNKLTTLKSLCKTTPYPKLCFNSLKLSISININPNIINFLLHSLQLAISETTKLSNLFHDVGTSNIVEKQRGSIQDCKELHQSTLTSLKRSLSGIRSSNKRNIADARIYLSAALTNKNTCLDGLDSASGTYKPVLVNSIINTYKHGYKKKSTSPKWLSKSLDLDEYDPNEMLVVSADGSGNFSTINDAINFAPNNSMVRIVIYVKEGYYDENVEIPSYKTNIVMLGDGSDSTVITGNRSVVDGWTTFRSATLAVSGDGFLARDIAFENRAGPEKHQAVALRVNADLTAFYKCAIYGYQDTLYVHSFRQFYRECDIYGTIDFIFGNAAVVLQECDIVSRMPLPGQFTVITAQSRDNPDEDTGISIQNCSIIATDELYSNSSKVKSYLGRPWRVFSRTVFIESYIDDFIDQKGWTKWSNDQGLDTLFYGEYENYGPGSKIDNRVEWVGYHLMDYNDAYNFSVSEFIIGDQWLESTSVPYDDGI