AlfalfaGEDB | MS.gene85779

M. sativa cultivar XinJiangDaYe / MS.gene85779

KEGG: K00671
GO: GO:0003674 GO:0003824 GO:0004379 GO:0006464 GO:0006497 GO:0006498 GO:0006499 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016410 GO:0016740 GO:0016746 GO:0016747 GO:0018377 GO:0019107 GO:0019538 GO:0031365 GO:0036211 GO:0043170 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0071704 GO:1901564
PFAM: PF01233.22 PF02799.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene85779.t1	XP_003595238.1	97.9	422	9	0	1	422	1	422	2.50E-243	850.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene85779.t1	Q9LTR9	82.4	415	73	0	8	422	20	434	8.1e-206	717.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene85779.t1	A2Q693	97.9	422	9	0	1	422	1	422	1.8e-243	850.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049887	MS.gene85779	0.803598	3.23E-49	-1.69E-46
MS.gene050317	MS.gene85779	0.819741	9.91E-53	-1.69E-46
MS.gene050838	MS.gene85779	0.850483	1.65E-60	-1.69E-46
MS.gene051233	MS.gene85779	0.895797	6.81E-76	-1.69E-46
MS.gene051234	MS.gene85779	0.811156	8.06E-51	-1.69E-46
MS.gene051343	MS.gene85779	0.808448	3.08E-50	-1.69E-46
MS.gene051902	MS.gene85779	0.813147	2.97E-51	-1.69E-46
MS.gene052342	MS.gene85779	0.806553	7.78E-50	-1.69E-46
MS.gene053058	MS.gene85779	0.827507	1.51E-54	-1.69E-46
MS.gene056580	MS.gene85779	0.827153	1.83E-54	-1.69E-46
MS.gene058638	MS.gene85779	0.804303	2.30E-49	-1.69E-46
MS.gene058639	MS.gene85779	0.808991	2.36E-50	-1.69E-46
MS.gene059146	MS.gene85779	0.804372	2.23E-49	-1.69E-46
MS.gene059171	MS.gene85779	0.808308	3.30E-50	-1.69E-46
MS.gene060463	MS.gene85779	0.829199	5.88E-55	-1.69E-46
MS.gene060465	MS.gene85779	0.832367	9.84E-56	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	bit score
MS.gene85779.t1	MTR_2g040010	97.867	422	9	0	1	422	1	422	867
MS.gene85779.t1	MTR_4g077300	80.191	419	79	1	4	422	20	434	716
MS.gene85779.t1	MTR_4g077300	80.191	419	79	1	4	422	25	439	716

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene85779.t1	AT5G57020	82.410	415	73	0	8	422	20	434	0.0	730
MS.gene85779.t1	AT2G44175	55.738	61	27	0	47	107	36	96	7.11e-17	76.6

Find 107 sgRNAs with CRISPR-Local

Find 119 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACTACTACTTGTACAATTAT+AGG	0.187773	2.1:-48707809	MS.gene85779:CDS
TAACAAAACAACACAAATTC+TGG	0.214433	2.1:-48708913	MS.gene85779:CDS
CTACTACTTGTACAATTATA+GGG	0.243214	2.1:-48707808	MS.gene85779:CDS
GAGGTTGCTTAGGGGTTATT+TGG	0.244842	2.1:-48708186	MS.gene85779:CDS
TATTTATCTGGAAGATTATA+AGG	0.248268	2.1:+48708791	None:intergenic
CGACGGTTACGGAAGGGTTT+AGG	0.250570	2.1:-48708241	MS.gene85779:CDS
TACGGAAGGGTTTAGGAAAA+TGG	0.258903	2.1:-48708234	MS.gene85779:CDS
GCTTGCGCCGGTTATGATTA+AGG	0.262713	2.1:-48708462	MS.gene85779:CDS
ACATGGGCTTTATGTGTTCC+TGG	0.263094	2.1:-48708644	MS.gene85779:CDS
GGGTTCATTTGGAGAATATT+TGG	0.271460	2.1:-48708427	MS.gene85779:CDS
ACATTGCCTAGTTCTATTCT+TGG	0.273116	2.1:-48708029	MS.gene85779:CDS
CTGGGATACCGGCGAGGATT+AGG	0.277817	2.1:-48708556	MS.gene85779:CDS
GGCGAAAGATTCGAAGAAAT+TGG	0.291934	2.1:-48708591	MS.gene85779:CDS
TTGACTTCTGATAAGGGTTT+TGG	0.313923	2.1:+48708821	None:intergenic
GTTTAGGTTTAATTATTCTA+AGG	0.316774	2.1:-48708675	MS.gene85779:CDS
CTGCGGTTACGAGGTTGCTT+AGG	0.321737	2.1:-48708196	MS.gene85779:CDS
GGTTACTAGGAGGGTTCATT+TGG	0.331531	2.1:-48708438	MS.gene85779:CDS
TTTCTTAAAGAGCTCAAGTT+TGG	0.336531	2.1:-48707852	MS.gene85779:CDS
GGTGGTTCAATTGGTCCTTC+TGG	0.338416	2.1:+48708842	None:intergenic
GACTTGGCATATTGGTGTTC+GGG	0.341741	2.1:-48708612	MS.gene85779:CDS
TGAATGGACAACCTGTGATA+TGG	0.347801	2.1:-48708768	MS.gene85779:CDS
TGCGGTTACGAGGTTGCTTA+GGG	0.347812	2.1:-48708195	MS.gene85779:CDS
AGACTTGGCATATTGGTGTT+CGG	0.351910	2.1:-48708613	MS.gene85779:CDS
TATTTCAAGACTTGGCATAT+TGG	0.370319	2.1:-48708620	MS.gene85779:CDS
TATTTGGCAAGCGGCATATA+CGG	0.372315	2.1:-48708411	MS.gene85779:CDS
TCTTGTTTGACTTCTGATAA+GGG	0.373224	2.1:+48708815	None:intergenic
GTTGTCCATTCATATTTATC+TGG	0.375624	2.1:+48708779	None:intergenic
CCTTCCGTAACCGTCGAATC+AGG	0.381842	2.1:+48708248	None:intergenic
GAGGTTTCTTCTGTTAGATC+TGG	0.383424	2.1:+48708977	None:intergenic
TTCTTGTTTGACTTCTGATA+AGG	0.393893	2.1:+48708814	None:intergenic
CGAAGAAGCTTATTGATGTT+GGG	0.396227	2.1:-48708328	MS.gene85779:CDS
GTTGCCTGATTCGACGGTTA+CGG	0.397086	2.1:-48708252	MS.gene85779:CDS
CCAACATCAATAAGCTTCTT+CGG	0.404437	2.1:+48708329	None:intergenic
CCGAAGAAGCTTATTGATGT+TGG	0.404989	2.1:-48708329	MS.gene85779:CDS
AGGTTGCTTAGGGGTTATTT+GGG	0.407230	2.1:-48708185	MS.gene85779:CDS
ACATCTTTGTATTGACCAAC+AGG	0.407915	2.1:+48708881	None:intergenic
TGGGATACCGGCGAGGATTA+GGG	0.413697	2.1:-48708555	MS.gene85779:CDS
GTTCAATTGGTCCTTCTGGT+AGG	0.414274	2.1:+48708846	None:intergenic
GAGGATTAGGGTTAATGATA+AGG	0.416957	2.1:-48708543	MS.gene85779:CDS
CATGGGCTTTATGTGTTCCT+GGG	0.422143	2.1:-48708643	MS.gene85779:CDS
TTCCTGGGTATTTCAAGACT+TGG	0.424441	2.1:-48708628	MS.gene85779:CDS
AGGATGATGAGAATATGTTT+AGG	0.427335	2.1:-48708691	MS.gene85779:CDS
GTAACCTCCTTAATCATAAC+CGG	0.443253	2.1:+48708455	None:intergenic
TAATGATAAGGTTGTTAGAA+TGG	0.450619	2.1:-48708531	MS.gene85779:CDS
ACATCATCTTCATCGAAATC+AGG	0.458994	2.1:+48708146	None:intergenic
AACAAAACAACACAAATTCT+GGG	0.465557	2.1:-48708912	MS.gene85779:CDS
TTCAATTGGTCCTTCTGGTA+GGG	0.468419	2.1:+48708847	None:intergenic
GCCAAGTTCAGATGGTTTCA+AGG	0.468825	2.1:+48707776	None:intergenic
TATGTGTGCATAAGAGACTT+AGG	0.474569	2.1:-48708493	MS.gene85779:CDS
TTGTTACTGACATTGAATCT+TGG	0.479599	2.1:+48708930	None:intergenic
TGGCAAGCGGCATATACGGC+TGG	0.484926	2.1:-48708407	MS.gene85779:CDS
TTATGATTAAGGAGGTTACT+AGG	0.486966	2.1:-48708451	MS.gene85779:CDS
GCCTTGAAACCATCTGAACT+TGG	0.488519	2.1:-48707777	MS.gene85779:CDS
GGCAAGCGGCATATACGGCT+GGG	0.490447	2.1:-48708406	MS.gene85779:CDS
GGATGTTGTGGATAGTTACT+TGG	0.502857	2.1:-48708099	MS.gene85779:CDS
CGGTTGCTACTTGTCAGTAT+TGG	0.504031	2.1:-48708367	MS.gene85779:CDS
TCTAACAGAAGAAACCTCAT+TGG	0.506590	2.1:-48708972	MS.gene85779:CDS
CAATACTGACAAGTAGCAAC+CGG	0.508494	2.1:+48708368	None:intergenic
CTCAAGTTTGGACCTGGAGA+TGG	0.512822	2.1:-48707840	MS.gene85779:CDS
ATCTTCCAGATAAATATGAA+TGG	0.516252	2.1:-48708784	MS.gene85779:CDS
TGCTTATTCTTATTATAATG+TGG	0.519646	2.1:-48707979	MS.gene85779:CDS
TAGTGAAGCTGTCCATCTCC+AGG	0.536498	2.1:+48707828	None:intergenic
CCTGATTCGACGGTTACGGA+AGG	0.537314	2.1:-48708248	MS.gene85779:CDS
TTCTTGACAACCCATATCAC+AGG	0.537957	2.1:+48708757	None:intergenic
AGCACAAGGCCAAGTTCAGA+TGG	0.537982	2.1:+48707768	None:intergenic
TTATAAGTTGCCTGATTCGA+CGG	0.543667	2.1:-48708258	MS.gene85779:CDS
GAATGGACAACCTGTGATAT+GGG	0.544918	2.1:-48708767	MS.gene85779:CDS
TGGGGTTGTGCTACCGACTC+CGG	0.545234	2.1:-48708387	MS.gene85779:CDS
GATTAAGGAGGTTACTAGGA+GGG	0.550672	2.1:-48708447	MS.gene85779:CDS
CTACTTGTCAGTATTGGCAT+AGG	0.554525	2.1:-48708361	MS.gene85779:CDS
CTGATTCGACGGTTACGGAA+GGG	0.563808	2.1:-48708247	MS.gene85779:CDS
GCAAGCGGCATATACGGCTG+GGG	0.581195	2.1:-48708405	MS.gene85779:CDS
GCTTCCACATGAGGATGTTG+TGG	0.582029	2.1:-48708111	MS.gene85779:CDS
TGTGGTTACTAAAACTCCGT+TGG	0.584486	2.1:-48707961	MS.gene85779:CDS
AAAGAGCTCAAGTTTGGACC+TGG	0.586615	2.1:-48707846	MS.gene85779:CDS
GTTTAGGAAAATGGAGCTGA+GGG	0.589117	2.1:-48708225	MS.gene85779:CDS
ACGAACAATTGTTTCCAATG+AGG	0.590265	2.1:+48708958	None:intergenic
ACTGATTGTGGCGAAGCAGA+AGG	0.590436	2.1:-48707919	MS.gene85779:CDS
TAGGTCGAAGAGGCTTGCGC+CGG	0.593908	2.1:-48708474	MS.gene85779:CDS
TCGTTCATCAACTGAGCCAA+CGG	0.597133	2.1:+48707945	None:intergenic
TTTGGAGAATATTTGGCAAG+CGG	0.597246	2.1:-48708420	MS.gene85779:CDS
CTAAGCAACCTCGTAACCGC+AGG	0.598384	2.1:+48708197	None:intergenic
TTCTGGGAAACACAACCTGT+TGG	0.598632	2.1:-48708896	MS.gene85779:CDS
ATGAAGATGATGTTGAGCAT+TGG	0.598843	2.1:-48708136	MS.gene85779:CDS
TGCCAAGTCTTGAAATACCC+AGG	0.599086	2.1:+48708626	None:intergenic
TGATTTCCAAGAATAGAACT+AGG	0.599510	2.1:+48708023	None:intergenic
TCATTAACCCTAATCCTCGC+CGG	0.602086	2.1:+48708548	None:intergenic
GCATTGGCTGCTTCCACATG+AGG	0.607953	2.1:-48708120	MS.gene85779:CDS
GGTTTAGGAAAATGGAGCTG+AGG	0.608661	2.1:-48708226	MS.gene85779:CDS
GTTGAAGAATAATTATGTTG+AGG	0.612089	2.1:-48708711	MS.gene85779:CDS
GTGCAAGGATGACAATGAGT+AGG	0.618998	2.1:-48708292	MS.gene85779:CDS
GGGATGTTCCTGCGGTTACG+AGG	0.624576	2.1:-48708205	MS.gene85779:CDS
TGACAAGTAGCAACCGGAGT+CGG	0.626237	2.1:+48708374	None:intergenic
GATGAACGATGCACTGATTG+TGG	0.628611	2.1:-48707931	MS.gene85779:CDS
TGATTAAGGAGGTTACTAGG+AGG	0.645667	2.1:-48708448	MS.gene85779:CDS
CTATCCACAACATCCTCATG+TGG	0.651247	2.1:+48708107	None:intergenic
GTTGGTCAATACAAAGATGT+TGG	0.654826	2.1:-48708878	MS.gene85779:CDS
TTATTACTGGGATACCGGCG+AGG	0.656725	2.1:-48708562	MS.gene85779:CDS
ATAAGAGACTTAGGTCGAAG+AGG	0.667868	2.1:-48708484	MS.gene85779:CDS
GGAGCTGAGGGATGTTCCTG+CGG	0.674491	2.1:-48708213	MS.gene85779:CDS
GGTGACACAACCCTACCAGA+AGG	0.676042	2.1:-48708857	MS.gene85779:CDS
TTGTCAAGAAACATGTGATG+AGG	0.682234	2.1:-48708744	MS.gene85779:CDS
TCAGAGACTACAAGAGCACA+AGG	0.684761	2.1:+48707754	None:intergenic
GCGGTTACGAGGTTGCTTAG+GGG	0.686915	2.1:-48708194	MS.gene85779:CDS
TTGGATGTAATGCATAACGA+GGG	0.690270	2.1:-48707876	MS.gene85779:CDS
TGCGCCGGTTATGATTAAGG+AGG	0.692587	2.1:-48708459	MS.gene85779:CDS
GTTGGATGTAATGCATAACG+AGG	0.704192	2.1:-48707877	MS.gene85779:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TATTTATCTGGAAGATTATA+AGG	+	chr2.1:48707980-48707999	None:intergenic	20.0%
!!	TGCTTATTCTTATTATAATG+TGG	-	chr2.1:48708789-48708808	MS.gene85779:CDS	20.0%
!!!	GTTTAGGTTTAATTATTCTA+AGG	-	chr2.1:48708093-48708112	MS.gene85779:CDS	20.0%
!	AACAAAACAACACAAATTCT+GGG	-	chr2.1:48707856-48707875	MS.gene85779:CDS	25.0%
!	ACTACTACTTGTACAATTAT+AGG	-	chr2.1:48708959-48708978	MS.gene85779:CDS	25.0%
!	ATCTTCCAGATAAATATGAA+TGG	-	chr2.1:48707984-48708003	MS.gene85779:CDS	25.0%
!	CTACTACTTGTACAATTATA+GGG	-	chr2.1:48708960-48708979	MS.gene85779:CDS	25.0%
!	GTTGAAGAATAATTATGTTG+AGG	-	chr2.1:48708057-48708076	MS.gene85779:CDS	25.0%
!	TAACAAAACAACACAAATTC+TGG	-	chr2.1:48707855-48707874	MS.gene85779:CDS	25.0%
!	TAATGATAAGGTTGTTAGAA+TGG	-	chr2.1:48708237-48708256	MS.gene85779:CDS	25.0%
!	TACAAAAATCAGTAATCTCA+TGG	+	chr2.1:48708711-48708730	None:intergenic	25.0%
!!!	AAATTGGTTGCTTTTATTAC+TGG	-	chr2.1:48708193-48708212	MS.gene85779:CDS	25.0%
!!!	AATTGGTTGCTTTTATTACT+GGG	-	chr2.1:48708194-48708213	MS.gene85779:CDS	25.0%
!!!	ATTCTAAGGAGTTTTTAACA+TGG	-	chr2.1:48708107-48708126	MS.gene85779:CDS	25.0%
!!!	TTCTAAGGAGTTTTTAACAT+GGG	-	chr2.1:48708108-48708127	MS.gene85779:CDS	25.0%
	AGGATGATGAGAATATGTTT+AGG	-	chr2.1:48708077-48708096	MS.gene85779:CDS	30.0%
	GTTGTCCATTCATATTTATC+TGG	+	chr2.1:48707992-48708011	None:intergenic	30.0%
	TATTTCAAGACTTGGCATAT+TGG	-	chr2.1:48708148-48708167	MS.gene85779:CDS	30.0%
	TGATTTCCAAGAATAGAACT+AGG	+	chr2.1:48708748-48708767	None:intergenic	30.0%
	TTATGATTAAGGAGGTTACT+AGG	-	chr2.1:48708317-48708336	MS.gene85779:CDS	30.0%
	TTGTTACTGACATTGAATCT+TGG	+	chr2.1:48707841-48707860	None:intergenic	30.0%
	TTTCTTAAAGAGCTCAAGTT+TGG	-	chr2.1:48708916-48708935	MS.gene85779:CDS	30.0%
!	TCTTGTTTGACTTCTGATAA+GGG	+	chr2.1:48707956-48707975	None:intergenic	30.0%
!	TTCTTGTTTGACTTCTGATA+AGG	+	chr2.1:48707957-48707976	None:intergenic	30.0%
	ACATCATCTTCATCGAAATC+AGG	+	chr2.1:48708625-48708644	None:intergenic	35.0%
	ACGAACAATTGTTTCCAATG+AGG	+	chr2.1:48707813-48707832	None:intergenic	35.0%
	ATGAAGATGATGTTGAGCAT+TGG	-	chr2.1:48708632-48708651	MS.gene85779:CDS	35.0%
	CCAACATCAATAAGCTTCTT+CGG	+	chr2.1:48708442-48708461	None:intergenic	35.0%
	CGAAGAAGCTTATTGATGTT+GGG	-	chr2.1:48708440-48708459	MS.gene85779:CDS	35.0%
	GAGGATTAGGGTTAATGATA+AGG	-	chr2.1:48708225-48708244	MS.gene85779:CDS	35.0%
	GGGTTCATTTGGAGAATATT+TGG	-	chr2.1:48708341-48708360	MS.gene85779:CDS	35.0%
	GTAACCTCCTTAATCATAAC+CGG	+	chr2.1:48708316-48708335	None:intergenic	35.0%
	GTTGGTCAATACAAAGATGT+TGG	-	chr2.1:48707890-48707909	MS.gene85779:CDS	35.0%
	TATGTGTGCATAAGAGACTT+AGG	-	chr2.1:48708275-48708294	MS.gene85779:CDS	35.0%
	TCTAACAGAAGAAACCTCAT+TGG	-	chr2.1:48707796-48707815	MS.gene85779:CDS	35.0%
	TTGGATGTAATGCATAACGA+GGG	-	chr2.1:48708892-48708911	MS.gene85779:CDS	35.0%
	TTGTCAAGAAACATGTGATG+AGG	-	chr2.1:48708024-48708043	MS.gene85779:CDS	35.0%
	TTTGGAGAATATTTGGCAAG+CGG	-	chr2.1:48708348-48708367	MS.gene85779:CDS	35.0%
!	ACATCTTTGTATTGACCAAC+AGG	+	chr2.1:48707890-48707909	None:intergenic	35.0%
!	TCAGTAATCTCATGGTTTTC+AGG	+	chr2.1:48708703-48708722	None:intergenic	35.0%
!	TGCTTTTATTACTGGGATAC+CGG	-	chr2.1:48708201-48708220	MS.gene85779:CDS	35.0%
!	TTATAAGTTGCCTGATTCGA+CGG	-	chr2.1:48708510-48708529	MS.gene85779:CDS	35.0%
!	TTATTGATGTTGGGTTTTCG+AGG	-	chr2.1:48708449-48708468	MS.gene85779:CDS	35.0%
!	TTGACTTCTGATAAGGGTTT+TGG	+	chr2.1:48707950-48707969	None:intergenic	35.0%
!	TTTCGATGTTTTCAATGCGT+TGG	-	chr2.1:48708873-48708892	MS.gene85779:CDS	35.0%
!!	ACATTGCCTAGTTCTATTCT+TGG	-	chr2.1:48708739-48708758	MS.gene85779:CDS	35.0%
	AGGTTGCTTAGGGGTTATTT+GGG	-	chr2.1:48708583-48708602	MS.gene85779:CDS	40.0%
	ATAAGAGACTTAGGTCGAAG+AGG	-	chr2.1:48708284-48708303	MS.gene85779:CDS	40.0%
	CAATACTGACAAGTAGCAAC+CGG	+	chr2.1:48708403-48708422	None:intergenic	40.0%
	CCGAAGAAGCTTATTGATGT+TGG	-	chr2.1:48708439-48708458	MS.gene85779:CDS	40.0%
	GAATGGACAACCTGTGATAT+GGG	-	chr2.1:48708001-48708020	MS.gene85779:CDS	40.0%
	GAGGTTTCTTCTGTTAGATC+TGG	+	chr2.1:48707794-48707813	None:intergenic	40.0%
	GATTAAGGAGGTTACTAGGA+GGG	-	chr2.1:48708321-48708340	MS.gene85779:CDS	40.0%
	GGATGTTGTGGATAGTTACT+TGG	-	chr2.1:48708669-48708688	MS.gene85779:CDS	40.0%
	GGCGAAAGATTCGAAGAAAT+TGG	-	chr2.1:48708177-48708196	MS.gene85779:CDS	40.0%
	GTTGGATGTAATGCATAACG+AGG	-	chr2.1:48708891-48708910	MS.gene85779:CDS	40.0%
	GTTTAGGAAAATGGAGCTGA+GGG	-	chr2.1:48708543-48708562	MS.gene85779:CDS	40.0%
	TACGGAAGGGTTTAGGAAAA+TGG	-	chr2.1:48708534-48708553	MS.gene85779:CDS	40.0%
	TATTTGGCAAGCGGCATATA+CGG	-	chr2.1:48708357-48708376	MS.gene85779:CDS	40.0%
	TGAATGGACAACCTGTGATA+TGG	-	chr2.1:48708000-48708019	MS.gene85779:CDS	40.0%
	TGATTAAGGAGGTTACTAGG+AGG	-	chr2.1:48708320-48708339	MS.gene85779:CDS	40.0%
	TGTGGTTACTAAAACTCCGT+TGG	-	chr2.1:48708807-48708826	MS.gene85779:CDS	40.0%
	TTCAATTGGTCCTTCTGGTA+GGG	+	chr2.1:48707924-48707943	None:intergenic	40.0%
	TTCCTGGGTATTTCAAGACT+TGG	-	chr2.1:48708140-48708159	MS.gene85779:CDS	40.0%
	TTCTTGACAACCCATATCAC+AGG	+	chr2.1:48708014-48708033	None:intergenic	40.0%
!	AGACTTGGCATATTGGTGTT+CGG	-	chr2.1:48708155-48708174	MS.gene85779:CDS	40.0%
!!	AAGGGTTTTGGTGGTTCAAT+TGG	+	chr2.1:48707938-48707957	None:intergenic	40.0%
!!	ACTTCTGATAAGGGTTTTGG+TGG	+	chr2.1:48707947-48707966	None:intergenic	40.0%
!!	CTACTTGTCAGTATTGGCAT+AGG	-	chr2.1:48708407-48708426	MS.gene85779:CDS	40.0%
	AAAGAGCTCAAGTTTGGACC+TGG	-	chr2.1:48708922-48708941	MS.gene85779:CDS	45.0%
	CTATCCACAACATCCTCATG+TGG	+	chr2.1:48708664-48708683	None:intergenic	45.0%
	GAGGTTGCTTAGGGGTTATT+TGG	-	chr2.1:48708582-48708601	MS.gene85779:CDS	45.0%
	GCCAAGTTCAGATGGTTTCA+AGG	+	chr2.1:48708995-48709014	None:intergenic	45.0%
	GCCTTGAAACCATCTGAACT+TGG	-	chr2.1:48708991-48709010	MS.gene85779:CDS	45.0%
	GGTTACTAGGAGGGTTCATT+TGG	-	chr2.1:48708330-48708349	MS.gene85779:CDS	45.0%
	GGTTTAGGAAAATGGAGCTG+AGG	-	chr2.1:48708542-48708561	MS.gene85779:CDS	45.0%
	GTGCAAGGATGACAATGAGT+AGG	-	chr2.1:48708476-48708495	MS.gene85779:CDS	45.0%
	GTTCAATTGGTCCTTCTGGT+AGG	+	chr2.1:48707925-48707944	None:intergenic	45.0%
	TCATTAACCCTAATCCTCGC+CGG	+	chr2.1:48708223-48708242	None:intergenic	45.0%
	TCGTTCATCAACTGAGCCAA+CGG	+	chr2.1:48708826-48708845	None:intergenic	45.0%
	TGCCAAGTCTTGAAATACCC+AGG	+	chr2.1:48708145-48708164	None:intergenic	45.0%
!	ACATGGGCTTTATGTGTTCC+TGG	-	chr2.1:48708124-48708143	MS.gene85779:CDS	45.0%
!	CATGGGCTTTATGTGTTCCT+GGG	-	chr2.1:48708125-48708144	MS.gene85779:CDS	45.0%
!	CGGTTGCTACTTGTCAGTAT+TGG	-	chr2.1:48708401-48708420	MS.gene85779:CDS	45.0%
!	GACTTGGCATATTGGTGTTC+GGG	-	chr2.1:48708156-48708175	MS.gene85779:CDS	45.0%
!	TTCTGGGAAACACAACCTGT+TGG	-	chr2.1:48707872-48707891	MS.gene85779:CDS	45.0%
!!	GATGAACGATGCACTGATTG+TGG	-	chr2.1:48708837-48708856	MS.gene85779:CDS	45.0%
	ACTGATTGTGGCGAAGCAGA+AGG	-	chr2.1:48708849-48708868	MS.gene85779:CDS	50.0%
	AGCACAAGGCCAAGTTCAGA+TGG	+	chr2.1:48709003-48709022	None:intergenic	50.0%
	CTCAAGTTTGGACCTGGAGA+TGG	-	chr2.1:48708928-48708947	MS.gene85779:CDS	50.0%
	GCTTCCACATGAGGATGTTG+TGG	-	chr2.1:48708657-48708676	MS.gene85779:CDS	50.0%
	GGTGGTTCAATTGGTCCTTC+TGG	+	chr2.1:48707929-48707948	None:intergenic	50.0%
	TAGTGAAGCTGTCCATCTCC+AGG	+	chr2.1:48708943-48708962	None:intergenic	50.0%
	TGACAAGTAGCAACCGGAGT+CGG	+	chr2.1:48708397-48708416	None:intergenic	50.0%
	TGCGGTTACGAGGTTGCTTA+GGG	-	chr2.1:48708573-48708592	MS.gene85779:CDS	50.0%
	TTATTACTGGGATACCGGCG+AGG	-	chr2.1:48708206-48708225	MS.gene85779:CDS	50.0%
!	CTGATTCGACGGTTACGGAA+GGG	-	chr2.1:48708521-48708540	MS.gene85779:CDS	50.0%
!	GTTGCCTGATTCGACGGTTA+CGG	-	chr2.1:48708516-48708535	MS.gene85779:CDS	50.0%
!!	GATGTTGGGTTTTCGAGGCT+TGG	-	chr2.1:48708454-48708473	MS.gene85779:CDS	50.0%
!!	GCTTGCGCCGGTTATGATTA+AGG	-	chr2.1:48708306-48708325	MS.gene85779:CDS	50.0%
!!	TGCGCCGGTTATGATTAAGG+AGG	-	chr2.1:48708309-48708328	MS.gene85779:CDS	50.0%
	CCTTCCGTAACCGTCGAATC+AGG	+	chr2.1:48708523-48708542	None:intergenic	55.0%
	CGACGGTTACGGAAGGGTTT+AGG	-	chr2.1:48708527-48708546	MS.gene85779:CDS	55.0%
	CTAAGCAACCTCGTAACCGC+AGG	+	chr2.1:48708574-48708593	None:intergenic	55.0%
	CTGCGGTTACGAGGTTGCTT+AGG	-	chr2.1:48708572-48708591	MS.gene85779:CDS	55.0%
	GCGGTTACGAGGTTGCTTAG+GGG	-	chr2.1:48708574-48708593	MS.gene85779:CDS	55.0%
	GGTGACACAACCCTACCAGA+AGG	-	chr2.1:48707911-48707930	MS.gene85779:CDS	55.0%
	TGGGATACCGGCGAGGATTA+GGG	-	chr2.1:48708213-48708232	MS.gene85779:CDS	55.0%
!	CCTGATTCGACGGTTACGGA+AGG	-	chr2.1:48708520-48708539	MS.gene85779:CDS	55.0%
!!	GCATTGGCTGCTTCCACATG+AGG	-	chr2.1:48708648-48708667	MS.gene85779:CDS	55.0%
!!!	GGTTTTCGAGGCTTGGTGCA+AGG	-	chr2.1:48708461-48708480	MS.gene85779:CDS	55.0%
	CTGGGATACCGGCGAGGATT+AGG	-	chr2.1:48708212-48708231	MS.gene85779:CDS	60.0%
	GCAAGCGGCATATACGGCTG+GGG	-	chr2.1:48708363-48708382	MS.gene85779:CDS	60.0%
	GGAGCTGAGGGATGTTCCTG+CGG	-	chr2.1:48708555-48708574	MS.gene85779:CDS	60.0%
	GGCAAGCGGCATATACGGCT+GGG	-	chr2.1:48708362-48708381	MS.gene85779:CDS	60.0%
	GGGATGTTCCTGCGGTTACG+AGG	-	chr2.1:48708563-48708582	MS.gene85779:CDS	60.0%
	TAGGTCGAAGAGGCTTGCGC+CGG	-	chr2.1:48708294-48708313	MS.gene85779:CDS	60.0%
	TGGCAAGCGGCATATACGGC+TGG	-	chr2.1:48708361-48708380	MS.gene85779:CDS	60.0%
!!	TGGGGTTGTGCTACCGACTC+CGG	-	chr2.1:48708381-48708400	MS.gene85779:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.1	gene	48707761	48709029	48707761	ID=MS.gene85779
chr2.1	mRNA	48707761	48709029	48707761	ID=MS.gene85779.t1;Parent=MS.gene85779
chr2.1	exon	48707761	48709029	48707761	ID=MS.gene85779.t1.exon1;Parent=MS.gene85779.t1
chr2.1	CDS	48707761	48709029	48707761	ID=cds.MS.gene85779.t1;Parent=MS.gene85779.t1

Gene Sequence

>MS.gene85779

ATGCAAAAAGAAAACAATTCTGAATCAAAACCAGATCTAACAGAAGAAACCTCATTGGAAACAATTGTTCGTAGTTTCCAAGATTCAATGTCAGTAACAAAACAACACAAATTCTGGGAAACACAACCTGTTGGTCAATACAAAGATGTTGGTGACACAACCCTACCAGAAGGACCAATTGAACCACCAAAACCCTTATCAGAAGTCAAACAAGAACCTTATAATCTTCCAGATAAATATGAATGGACAACCTGTGATATGGGTTGTCAAGAAACATGTGATGAGGTTTATCTTTTGTTGAAGAATAATTATGTTGAGGATGATGAGAATATGTTTAGGTTTAATTATTCTAAGGAGTTTTTAACATGGGCTTTATGTGTTCCTGGGTATTTCAAGACTTGGCATATTGGTGTTCGGGCGAAAGATTCGAAGAAATTGGTTGCTTTTATTACTGGGATACCGGCGAGGATTAGGGTTAATGATAAGGTTGTTAGAATGGCTGAGATTAATTTTTTATGTGTGCATAAGAGACTTAGGTCGAAGAGGCTTGCGCCGGTTATGATTAAGGAGGTTACTAGGAGGGTTCATTTGGAGAATATTTGGCAAGCGGCATATACGGCTGGGGTTGTGCTACCGACTCCGGTTGCTACTTGTCAGTATTGGCATAGGTCGTTGAATCCGAAGAAGCTTATTGATGTTGGGTTTTCGAGGCTTGGTGCAAGGATGACAATGAGTAGGACTATTAAGCTTTATAAGTTGCCTGATTCGACGGTTACGGAAGGGTTTAGGAAAATGGAGCTGAGGGATGTTCCTGCGGTTACGAGGTTGCTTAGGGGTTATTTGGGACAGTTTGTTGTTGCGCCTGATTTCGATGAAGATGATGTTGAGCATTGGCTGCTTCCACATGAGGATGTTGTGGATAGTTACTTGGTTGAGAGTCCTGAAAACCATGAGATTACTGATTTTTGTAGCTTTTATACATTGCCTAGTTCTATTCTTGGAAATCAGAGATACTCAAGTTTGAAAATTGCTTATTCTTATTATAATGTGGTTACTAAAACTCCGTTGGCTCAGTTGATGAACGATGCACTGATTGTGGCGAAGCAGAAGGATTTCGATGTTTTCAATGCGTTGGATGTAATGCATAACGAGGGTTTTCTTAAAGAGCTCAAGTTTGGACCTGGAGATGGACAGCTTCACTACTACTTGTACAATTATAGGGTTCGTAATGCCTTGAAACCATCTGAACTTGGCCTTGTGCTCTTGTAG

Protein sequence

>MS.gene85779.t1

MQKENNSESKPDLTEETSLETIVRSFQDSMSVTKQHKFWETQPVGQYKDVGDTTLPEGPIEPPKPLSEVKQEPYNLPDKYEWTTCDMGCQETCDEVYLLLKNNYVEDDENMFRFNYSKEFLTWALCVPGYFKTWHIGVRAKDSKKLVAFITGIPARIRVNDKVVRMAEINFLCVHKRLRSKRLAPVMIKEVTRRVHLENIWQAAYTAGVVLPTPVATCQYWHRSLNPKKLIDVGFSRLGARMTMSRTIKLYKLPDSTVTEGFRKMELRDVPAVTRLLRGYLGQFVVAPDFDEDDVEHWLLPHEDVVDSYLVESPENHEITDFCSFYTLPSSILGNQRYSSLKIAYSYYNVVTKTPLAQLMNDALIVAKQKDFDVFNALDVMHNEGFLKELKFGPGDGQLHYYLYNYRVRNALKPSELGLVLL