Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86009.t1 | XP_013444655.1 | 100 | 190 | 0 | 0 | 1 | 190 | 1 | 190 | 3.20E-105 | 391 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86009.t1 | Q84MC7 | 81.1 | 175 | 32 | 1 | 10 | 183 | 12 | 186 | 1.2e-79 | 297.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86009.t1 | G8A086 | 100.0 | 190 | 0 | 0 | 1 | 190 | 1 | 190 | 2.3e-105 | 391.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene86009 | MS.gene013622 | PPI |
| MS.gene86009 | MS.gene057109 | PPI |
| MS.gene86009 | MS.gene06744 | PPI |
| MS.gene86009 | MS.gene31808 | PPI |
| MS.gene86009 | MS.gene046813 | PPI |
| MS.gene86009 | MS.gene057110 | PPI |
| MS.gene86009 | MS.gene06745 | PPI |
| MS.gene86009 | MS.gene84133 | PPI |
| MS.gene057108 | MS.gene86009 | PPI |
| MS.gene32355 | MS.gene86009 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86009.t1 | MTR_8g027805 | 100.000 | 190 | 0 | 0 | 1 | 190 | 1 | 190 | 1.04e-142 | 395 |
| MS.gene86009.t1 | MTR_3g090980 | 75.269 | 186 | 45 | 1 | 3 | 187 | 5 | 190 | 3.08e-103 | 295 |
| MS.gene86009.t1 | MTR_1g028380 | 71.739 | 184 | 52 | 0 | 4 | 187 | 5 | 188 | 1.22e-100 | 288 |
| MS.gene86009.t1 | MTR_3g071740 | 54.777 | 157 | 66 | 3 | 21 | 175 | 69 | 222 | 2.28e-58 | 183 |
| MS.gene86009.t1 | MTR_7g070050 | 55.689 | 167 | 68 | 3 | 18 | 178 | 13 | 179 | 7.85e-57 | 177 |
| MS.gene86009.t1 | MTR_5g083270 | 52.500 | 160 | 70 | 3 | 21 | 177 | 49 | 205 | 9.06e-57 | 178 |
| MS.gene86009.t1 | MTR_4g014460 | 48.447 | 161 | 82 | 1 | 18 | 177 | 49 | 209 | 1.69e-53 | 170 |
| MS.gene86009.t1 | MTR_1g016480 | 46.512 | 172 | 90 | 2 | 4 | 174 | 26 | 196 | 9.98e-53 | 167 |
| MS.gene86009.t1 | MTR_5g030500 | 45.856 | 181 | 90 | 4 | 1 | 175 | 28 | 206 | 1.16e-49 | 160 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86009.t1 | AT1G01360 | 78.689 | 183 | 36 | 2 | 1 | 180 | 1 | 183 | 4.50e-105 | 300 |
| MS.gene86009.t1 | AT5G53160 | 76.923 | 182 | 42 | 0 | 3 | 184 | 4 | 185 | 1.57e-104 | 298 |
| MS.gene86009.t1 | AT4G01026 | 75.568 | 176 | 43 | 0 | 11 | 186 | 16 | 191 | 6.78e-99 | 285 |
| MS.gene86009.t1 | AT4G27920 | 69.189 | 185 | 53 | 2 | 3 | 186 | 2 | 183 | 9.33e-96 | 276 |
| MS.gene86009.t1 | AT5G53160 | 74.783 | 115 | 29 | 0 | 3 | 117 | 4 | 118 | 3.06e-60 | 185 |
| MS.gene86009.t1 | AT5G05440 | 52.761 | 163 | 72 | 3 | 16 | 176 | 43 | 202 | 3.01e-55 | 174 |
| MS.gene86009.t1 | AT2G38310 | 53.939 | 165 | 71 | 3 | 20 | 182 | 41 | 202 | 3.57e-54 | 171 |
| MS.gene86009.t1 | AT2G40330 | 50.000 | 164 | 78 | 3 | 16 | 175 | 46 | 209 | 1.39e-52 | 167 |
| MS.gene86009.t1 | AT4G17870 | 49.080 | 163 | 81 | 1 | 18 | 178 | 17 | 179 | 9.23e-50 | 159 |
| MS.gene86009.t1 | AT2G26040 | 46.835 | 158 | 79 | 3 | 18 | 171 | 22 | 178 | 3.41e-49 | 158 |
| MS.gene86009.t1 | AT1G73000 | 39.560 | 182 | 98 | 3 | 4 | 174 | 24 | 204 | 1.20e-44 | 147 |
| MS.gene86009.t1 | AT5G46790 | 49.405 | 168 | 80 | 2 | 15 | 177 | 41 | 208 | 4.33e-44 | 146 |
| MS.gene86009.t1 | AT5G46790 | 49.405 | 168 | 80 | 2 | 15 | 177 | 41 | 208 | 4.33e-44 | 146 |
| MS.gene86009.t1 | AT5G45860 | 54.362 | 149 | 66 | 2 | 31 | 178 | 10 | 157 | 5.73e-43 | 141 |
| MS.gene86009.t1 | AT5G45870 | 53.378 | 148 | 66 | 2 | 31 | 177 | 10 | 155 | 3.28e-42 | 139 |
| MS.gene86009.t1 | AT4G18620 | 45.570 | 158 | 79 | 1 | 27 | 177 | 5 | 162 | 2.09e-38 | 130 |
Find 47 sgRNAs with CRISPR-Local
Find 86 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACATCACAAACATGATTTA+AGG | 0.199874 | 8.2:-69681764 | MS.gene86009:CDS |
| ATAATACACCTGCTAATAAA+TGG | 0.258954 | 8.2:+69681024 | None:intergenic |
| CTCCGGATGGACTGTGATTA+TGG | 0.268603 | 8.2:+69680373 | None:intergenic |
| GATGATGAGGAACATATTCT+TGG | 0.320325 | 8.2:-69680910 | MS.gene86009:CDS |
| TATTATGGGTTGATATTGAT+AGG | 0.326932 | 8.2:+69680182 | None:intergenic |
| TCGTCCTTCGTGTTCCCTTC+AGG | 0.331294 | 8.2:+69680296 | None:intergenic |
| AGGAACATATTCTTGGTATC+AGG | 0.338682 | 8.2:-69680903 | MS.gene86009:CDS |
| CTCGGAGAGGATGGCCGTGC+AGG | 0.374882 | 8.2:-69680216 | MS.gene86009:CDS |
| AATATAAACCATTTATTAGC+AGG | 0.415514 | 8.2:-69681032 | MS.gene86009:CDS |
| ATTCTTGGTATCAGGATTGT+TGG | 0.418206 | 8.2:-69680895 | MS.gene86009:CDS |
| GGACGAAACTTGTTACTTTG+TGG | 0.425400 | 8.2:-69680279 | MS.gene86009:CDS |
| CTCTTACACTTCCAATACTA+AGG | 0.431766 | 8.2:+69680992 | None:intergenic |
| AGAGAAGTGAATGTTAAATC+TGG | 0.439454 | 8.2:-69680973 | MS.gene86009:CDS |
| ACATCACAAACATGATTTAA+GGG | 0.442195 | 8.2:-69681763 | MS.gene86009:CDS |
| AAAGTACTAACAAGATGAAC+TGG | 0.454898 | 8.2:+69681699 | None:intergenic |
| CTCTCAGTACTTGTTGTAGC+TGG | 0.467121 | 8.2:+69680946 | None:intergenic |
| ACTTTGTGGAGGCGTTGATT+AGG | 0.470355 | 8.2:-69680265 | MS.gene86009:CDS |
| TTCCATAATCACAGTCCATC+CGG | 0.473119 | 8.2:-69680375 | MS.gene86009:CDS |
| ATGCAAGGTGACCTTAGTAT+TGG | 0.474026 | 8.2:-69681003 | MS.gene86009:CDS |
| CTTGGTATCAGGATTGTTGG+TGG | 0.526123 | 8.2:-69680892 | MS.gene86009:CDS |
| AGCTGATGTCTCGGAGAGGA+TGG | 0.526503 | 8.2:-69680225 | MS.gene86009:CDS |
| GTCCATCCGGAGGTTATTGA+CGG | 0.527187 | 8.2:-69680362 | MS.gene86009:CDS |
| ATAAATGGTTTATATTTCTG+TGG | 0.528070 | 8.2:+69681039 | None:intergenic |
| GAGGTTATTGACGGAAGACC+AGG | 0.540051 | 8.2:-69680353 | MS.gene86009:CDS |
| TACAACAAGTACTGAGAGGT+TGG | 0.543951 | 8.2:-69680941 | MS.gene86009:CDS |
| TCGGAGAGGATGGCCGTGCA+GGG | 0.544070 | 8.2:-69680215 | MS.gene86009:CDS |
| TGGGTTGATATTGATAGGAT+CGG | 0.544822 | 8.2:+69680187 | None:intergenic |
| AGACATCAGCTAAAGAACTT+AGG | 0.546542 | 8.2:+69680237 | None:intergenic |
| GATTCAATCACCATTGTACC+TGG | 0.555628 | 8.2:+69680335 | None:intergenic |
| ATTAGCAGGTGTATTATGCA+AGG | 0.563774 | 8.2:-69681018 | MS.gene86009:CDS |
| GGTCTTCCGTCAATAACCTC+CGG | 0.572740 | 8.2:+69680356 | None:intergenic |
| TTCGTTGTGGACGTACCTGA+AGG | 0.574232 | 8.2:-69680311 | MS.gene86009:CDS |
| AAGTTCTTTAGCTGATGTCT+CGG | 0.584502 | 8.2:-69680234 | MS.gene86009:CDS |
| TTCCGTCAATAACCTCCGGA+TGG | 0.584863 | 8.2:+69680360 | None:intergenic |
| CGAAACTTGTTACTTTGTGG+AGG | 0.590781 | 8.2:-69680276 | MS.gene86009:CDS |
| GATGTGTTTAACAAGAGCAG+AGG | 0.600623 | 8.2:+69681728 | None:intergenic |
| GTTGGAACAACTTGATGATG+AGG | 0.610978 | 8.2:-69680923 | MS.gene86009:CDS |
| TCGTTGTGGACGTACCTGAA+GGG | 0.643680 | 8.2:-69680310 | MS.gene86009:CDS |
| TGACGGAAGACCAGGTACAA+TGG | 0.649685 | 8.2:-69680345 | MS.gene86009:CDS |
| AGGATCGGTTCGACCCTGCA+CGG | 0.651985 | 8.2:+69680202 | None:intergenic |
| GGTGATTGAATCATTCGTTG+TGG | 0.673616 | 8.2:-69680324 | MS.gene86009:CDS |
| CAGCTACAACAAGTACTGAG+AGG | 0.700141 | 8.2:-69680945 | MS.gene86009:CDS |
| CATAATCACAGTCCATCCGG+AGG | 0.702023 | 8.2:-69680372 | MS.gene86009:CDS |
| CTTTAGCTGATGTCTCGGAG+AGG | 0.710726 | 8.2:-69680229 | MS.gene86009:CDS |
| TGGTGGTGATCATAGACTGA+GGG | 0.717983 | 8.2:-69680875 | MS.gene86009:intron |
| TTGGTGGTGATCATAGACTG+AGG | 0.778919 | 8.2:-69680876 | MS.gene86009:CDS |
| CGTACCTGAAGGGAACACGA+AGG | 0.780385 | 8.2:-69680300 | MS.gene86009:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAGAAAAATATTTTGAATT+TGG | + | chr8.2:69681184-69681203 | None:intergenic | 10.0% |
| !!! | TTTTTACTTATTAATAGAAA+TGG | - | chr8.2:69681490-69681509 | MS.gene86009:intron | 10.0% |
| !! | AAAATACCAAACTTAAAATT+TGG | + | chr8.2:69681355-69681374 | None:intergenic | 15.0% |
| !! | AATGAAGAAATTGTATAATA+TGG | - | chr8.2:69681241-69681260 | MS.gene86009:intron | 15.0% |
| !!! | AAATTTTAAGTTTGGTATTT+TGG | - | chr8.2:69681354-69681373 | MS.gene86009:intron | 15.0% |
| !!! | GAAATAATTTTTTTGGAAAA+GGG | - | chr8.2:69680604-69680623 | MS.gene86009:intron | 15.0% |
| !!! | TGAAATAATTTTTTTGGAAA+AGG | - | chr8.2:69680603-69680622 | MS.gene86009:intron | 15.0% |
| !! | AATATAAACCATTTATTAGC+AGG | - | chr8.2:69680974-69680993 | MS.gene86009:CDS | 20.0% |
| !!! | AATTTTTTTAAGGTTGGATT+AGG | - | chr8.2:69680719-69680738 | MS.gene86009:intron | 20.0% |
| !!! | ATAAATGGTTTATATTTCTG+TGG | + | chr8.2:69680970-69680989 | None:intergenic | 20.0% |
| !!! | CATAGTCAGAAATTTTTTTA+AGG | - | chr8.2:69680709-69680728 | MS.gene86009:intron | 20.0% |
| !!! | CTTCTTTTAATTTTCTCTTT+TGG | + | chr8.2:69680876-69680895 | None:intergenic | 20.0% |
| !!! | GAAAATTAAAAGAAGTTGAT+TGG | - | chr8.2:69680881-69680900 | MS.gene86009:CDS | 20.0% |
| !!! | TATATTTTTTTGTCTCTTTC+AGG | - | chr8.2:69680915-69680934 | MS.gene86009:CDS | 20.0% |
| !!! | TGGTTGTGAAATAATTTTTT+TGG | - | chr8.2:69680597-69680616 | MS.gene86009:intron | 20.0% |
| !!! | TTTTGAATTTGGAAAAACAA+AGG | + | chr8.2:69681173-69681192 | None:intergenic | 20.0% |
| ! | AACTATACATCTCAAAGAAA+TGG | + | chr8.2:69680503-69680522 | None:intergenic | 25.0% |
| ! | ACATCACAAACATGATTTAA+GGG | - | chr8.2:69680243-69680262 | MS.gene86009:CDS | 25.0% |
| ! | ATAATACACCTGCTAATAAA+TGG | + | chr8.2:69680985-69681004 | None:intergenic | 25.0% |
| ! | GAGAGATTATCTTATAATCT+TGG | - | chr8.2:69681432-69681451 | MS.gene86009:intron | 25.0% |
| ! | TCTTATGTTTATGTCTTCAT+AGG | - | chr8.2:69681541-69681560 | MS.gene86009:intron | 25.0% |
| ! | TGAGACATTTAATTGATGTT+TGG | - | chr8.2:69680786-69680805 | MS.gene86009:intron | 25.0% |
| ! | TGTCTCACAAACAATAAAAT+TGG | + | chr8.2:69680773-69680792 | None:intergenic | 25.0% |
| !! | TCTAGATTTGTGTTTTATGA+GGG | - | chr8.2:69680525-69680544 | MS.gene86009:intron | 25.0% |
| !! | TTCTAGATTTGTGTTTTATG+AGG | - | chr8.2:69680524-69680543 | MS.gene86009:intron | 25.0% |
| !!! | GTCAGAAATTTTTTTAAGGT+TGG | - | chr8.2:69680713-69680732 | MS.gene86009:intron | 25.0% |
| !!! | TTTTTTGTGTCTGAATTACA+TGG | - | chr8.2:69680418-69680437 | MS.gene86009:intron | 25.0% |
| AAAAAATCAATGGTCACCAA+TGG | - | chr8.2:69681393-69681412 | MS.gene86009:intron | 30.0% | |
| AGAGAAGTGAATGTTAAATC+TGG | - | chr8.2:69681033-69681052 | MS.gene86009:CDS | 30.0% | |
| GACATCACAAACATGATTTA+AGG | - | chr8.2:69680242-69680261 | MS.gene86009:CDS | 30.0% | |
| TTTCAAGATCTTGATTGTCT+TGG | - | chr8.2:69680476-69680495 | MS.gene86009:intron | 30.0% | |
| ! | AAAGTACTAACAAGATGAAC+TGG | + | chr8.2:69680310-69680329 | None:intergenic | 30.0% |
| ! | ATTTGTGTTTTATGAGGGTA+TGG | - | chr8.2:69680530-69680549 | MS.gene86009:intron | 30.0% |
| !!! | AGTAAGATGCTAGTTTTGAT+TGG | - | chr8.2:69680570-69680589 | MS.gene86009:intron | 30.0% |
| !!! | TGCTAGTTTTGATTGGTTTA+TGG | - | chr8.2:69680577-69680596 | MS.gene86009:intron | 30.0% |
| !!! | TTTTTTGTCTCTTTCAGGTT+TGG | - | chr8.2:69680920-69680939 | MS.gene86009:CDS | 30.0% |
| AAGTTCTTTAGCTGATGTCT+CGG | - | chr8.2:69681772-69681791 | MS.gene86009:CDS | 35.0% | |
| AGACATCAGCTAAAGAACTT+AGG | + | chr8.2:69681772-69681791 | None:intergenic | 35.0% | |
| AGGAACATATTCTTGGTATC+AGG | - | chr8.2:69681103-69681122 | MS.gene86009:intron | 35.0% | |
| ATCGTTAAACCAAGATCAGA+CGG | - | chr8.2:69681328-69681347 | MS.gene86009:intron | 35.0% | |
| ATTAGCAGGTGTATTATGCA+AGG | - | chr8.2:69680988-69681007 | MS.gene86009:CDS | 35.0% | |
| ATTCTTGGTATCAGGATTGT+TGG | - | chr8.2:69681111-69681130 | MS.gene86009:intron | 35.0% | |
| CTCTTACACTTCCAATACTA+AGG | + | chr8.2:69681017-69681036 | None:intergenic | 35.0% | |
| GATGATGAGGAACATATTCT+TGG | - | chr8.2:69681096-69681115 | MS.gene86009:intron | 35.0% | |
| TTTGTGTCTGAATTACATGG+TGG | - | chr8.2:69680421-69680440 | MS.gene86009:intron | 35.0% | |
| ! | GCTATGATTTGAAATTCACG+CGG | - | chr8.2:69681291-69681310 | MS.gene86009:intron | 35.0% |
| !! | TGGGTTGATATTGATAGGAT+CGG | + | chr8.2:69681822-69681841 | None:intergenic | 35.0% |
| !!! | GACGGTCCAAATTTTAAGTT+TGG | - | chr8.2:69681346-69681365 | MS.gene86009:intron | 35.0% |
| AAATTTGGACCGTCTGATCT+TGG | + | chr8.2:69681340-69681359 | None:intergenic | 40.0% | |
| AGCATCAGTTGTAAGCTGAA+CGG | - | chr8.2:69681569-69681588 | MS.gene86009:intron | 40.0% | |
| ATGCAAGGTGACCTTAGTAT+TGG | - | chr8.2:69681003-69681022 | MS.gene86009:CDS | 40.0% | |
| CATTCACACATTCAGTCCAT+TGG | + | chr8.2:69681412-69681431 | None:intergenic | 40.0% | |
| GATGTGTTTAACAAGAGCAG+AGG | + | chr8.2:69680281-69680300 | None:intergenic | 40.0% | |
| GATTCAATCACCATTGTACC+TGG | + | chr8.2:69681674-69681693 | None:intergenic | 40.0% | |
| GGTGATTGAATCATTCGTTG+TGG | - | chr8.2:69681682-69681701 | MS.gene86009:intron | 40.0% | |
| TTCCATAATCACAGTCCATC+CGG | - | chr8.2:69681631-69681650 | MS.gene86009:intron | 40.0% | |
| !! | CAATGGACTGAATGTGTGAA+TGG | - | chr8.2:69681410-69681429 | MS.gene86009:intron | 40.0% |
| !! | CGAAACTTGTTACTTTGTGG+AGG | - | chr8.2:69681730-69681749 | MS.gene86009:CDS | 40.0% |
| !! | GGACGAAACTTGTTACTTTG+TGG | - | chr8.2:69681727-69681746 | MS.gene86009:CDS | 40.0% |
| !! | GTTGGAACAACTTGATGATG+AGG | - | chr8.2:69681083-69681102 | MS.gene86009:intron | 40.0% |
| !! | TACAACAAGTACTGAGAGGT+TGG | - | chr8.2:69681065-69681084 | MS.gene86009:CDS | 40.0% |
| CTTGGTATCAGGATTGTTGG+TGG | - | chr8.2:69681114-69681133 | MS.gene86009:intron | 45.0% | |
| ! | TGGTGGTGATCATAGACTGA+GGG | - | chr8.2:69681131-69681150 | MS.gene86009:intron | 45.0% |
| !! | ACTTTGTGGAGGCGTTGATT+AGG | - | chr8.2:69681741-69681760 | MS.gene86009:CDS | 45.0% |
| !! | CAGCTACAACAAGTACTGAG+AGG | - | chr8.2:69681061-69681080 | MS.gene86009:CDS | 45.0% |
| !! | CTCTCAGTACTTGTTGTAGC+TGG | + | chr8.2:69681063-69681082 | None:intergenic | 45.0% |
| !! | TTGGTGGTGATCATAGACTG+AGG | - | chr8.2:69681130-69681149 | MS.gene86009:intron | 45.0% |
| !! | AAAAAAAAAAAAAAAATCAA+TGG | - | chr8.2:69681383-69681402 | MS.gene86009:intron | 5.0% |
| !! | ATTAATAAGTAAAAAAAATA+TGG | + | chr8.2:69681485-69681504 | None:intergenic | 5.0% |
| AATTCACGCGGTCAGCACAT+CGG | - | chr8.2:69681303-69681322 | MS.gene86009:intron | 50.0% | |
| CATAATCACAGTCCATCCGG+AGG | - | chr8.2:69681634-69681653 | MS.gene86009:intron | 50.0% | |
| CTTTAGCTGATGTCTCGGAG+AGG | - | chr8.2:69681777-69681796 | MS.gene86009:CDS | 50.0% | |
| GAGGTTATTGACGGAAGACC+AGG | - | chr8.2:69681653-69681672 | MS.gene86009:intron | 50.0% | |
| GGTCTTCCGTCAATAACCTC+CGG | + | chr8.2:69681653-69681672 | None:intergenic | 50.0% | |
| GTCCATCCGGAGGTTATTGA+CGG | - | chr8.2:69681644-69681663 | MS.gene86009:intron | 50.0% | |
| TCGTTGTGGACGTACCTGAA+GGG | - | chr8.2:69681696-69681715 | MS.gene86009:intron | 50.0% | |
| TGACGGAAGACCAGGTACAA+TGG | - | chr8.2:69681661-69681680 | MS.gene86009:intron | 50.0% | |
| TTCCGTCAATAACCTCCGGA+TGG | + | chr8.2:69681649-69681668 | None:intergenic | 50.0% | |
| TTCGTTGTGGACGTACCTGA+AGG | - | chr8.2:69681695-69681714 | MS.gene86009:intron | 50.0% | |
| !! | CTCCGGATGGACTGTGATTA+TGG | + | chr8.2:69681636-69681655 | None:intergenic | 50.0% |
| AGCTGATGTCTCGGAGAGGA+TGG | - | chr8.2:69681781-69681800 | MS.gene86009:CDS | 55.0% | |
| CGTACCTGAAGGGAACACGA+AGG | - | chr8.2:69681706-69681725 | MS.gene86009:intron | 55.0% | |
| TCGTCCTTCGTGTTCCCTTC+AGG | + | chr8.2:69681713-69681732 | None:intergenic | 55.0% | |
| !! | AGGATCGGTTCGACCCTGCA+CGG | + | chr8.2:69681807-69681826 | None:intergenic | 60.0% |
| TCGGAGAGGATGGCCGTGCA+GGG | - | chr8.2:69681791-69681810 | MS.gene86009:CDS | 65.0% | |
| CTCGGAGAGGATGGCCGTGC+AGG | - | chr8.2:69681790-69681809 | MS.gene86009:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 69680184 | 69681844 | 69680184 | ID=MS.gene86009 |
| chr8.2 | mRNA | 69680184 | 69681844 | 69680184 | ID=MS.gene86009.t1;Parent=MS.gene86009 |
| chr8.2 | exon | 69681710 | 69681844 | 69681710 | ID=MS.gene86009.t1.exon1;Parent=MS.gene86009.t1 |
| chr8.2 | CDS | 69681710 | 69681844 | 69681710 | ID=cds.MS.gene86009.t1;Parent=MS.gene86009.t1 |
| chr8.2 | exon | 69680876 | 69681091 | 69680876 | ID=MS.gene86009.t1.exon2;Parent=MS.gene86009.t1 |
| chr8.2 | CDS | 69680876 | 69681091 | 69680876 | ID=cds.MS.gene86009.t1;Parent=MS.gene86009.t1 |
| chr8.2 | exon | 69680184 | 69680405 | 69680184 | ID=MS.gene86009.t1.exon3;Parent=MS.gene86009.t1 |
| chr8.2 | CDS | 69680184 | 69680405 | 69680184 | ID=cds.MS.gene86009.t1;Parent=MS.gene86009.t1 |
| Gene Sequence |
| Protein sequence |
