AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene86023

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene86023.t1 MTR_8g027920 97.391 575 15 0 39 613 1 575 0.0 1164
MS.gene86023.t1 MTR_8g027955 87.759 580 71 0 34 613 3 582 0.0 1067
MS.gene86023.t1 MTR_8g027965 88.174 575 68 0 39 613 1 575 0.0 1061
MS.gene86023.t1 MTR_8g027970 82.087 575 103 0 39 613 1 575 0.0 1009
MS.gene86023.t1 MTR_7g117110 74.439 579 144 1 39 613 1 579 0.0 923
MS.gene86023.t1 MTR_7g117110 71.807 415 109 2 39 449 1 411 0.0 631
MS.gene86023.t1 MTR_0102s0060 46.233 584 294 8 47 613 17 597 0.0 547
MS.gene86023.t1 MTR_5g016320 37.801 582 343 8 43 611 15 590 7.78e-142 425
MS.gene86023.t1 MTR_8g037720 61.994 321 96 2 297 613 137 435 5.80e-140 414
MS.gene86023.t1 MTR_8g037720 68.794 141 44 0 48 188 1 141 5.32e-57 198
MS.gene86023.t1 MTR_0035s0150 37.876 565 337 8 50 609 21 576 1.93e-134 405
MS.gene86023.t1 MTR_4g045903 36.222 577 344 8 49 610 30 597 7.89e-128 389
MS.gene86023.t1 MTR_8g467000 35.172 580 352 6 49 609 15 589 1.63e-127 388
MS.gene86023.t1 MTR_2g081860 35.678 583 348 6 49 609 14 591 6.08e-127 387
MS.gene86023.t1 MTR_1g047730 66.031 262 74 3 356 613 112 362 1.26e-119 359
MS.gene86023.t1 MTR_1g047730 44.304 158 43 3 48 204 1 114 1.60e-28 117
MS.gene86023.t1 MTR_1g088765 35.829 561 337 11 49 588 11 569 3.19e-115 356
MS.gene86023.t1 MTR_7g094190 33.449 577 345 16 49 599 5 568 2.81e-91 293
MS.gene86023.t1 MTR_1g088765 38.542 384 216 9 223 588 44 425 2.19e-84 271
MS.gene86023.t1 MTR_7g094190 32.008 478 293 13 143 599 2 468 3.48e-67 227
MS.gene86023.t1 MTR_7g094330 31.818 308 169 8 143 442 2 276 6.56e-38 142
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene86023.t1 AT2G46370 64.736 587 202 4 29 612 2 586 0.0 809
MS.gene86023.t1 AT2G46370 65.511 577 194 4 39 612 1 575 0.0 807
MS.gene86023.t1 AT2G46370 65.511 577 194 4 39 612 1 575 0.0 807
MS.gene86023.t1 AT2G46370 66.466 498 164 2 116 612 1 496 0.0 721
MS.gene86023.t1 AT4G03400 48.205 585 281 8 49 613 9 591 0.0 560
MS.gene86023.t1 AT4G03400 48.205 585 281 8 49 613 9 591 0.0 560
MS.gene86023.t1 AT2G23170 38.772 570 336 7 50 611 21 585 1.88e-141 424
MS.gene86023.t1 AT4G37390 38.609 575 333 9 50 609 22 591 3.44e-139 418
MS.gene86023.t1 AT4G27260 37.311 595 343 7 40 609 7 596 9.08e-137 412
MS.gene86023.t1 AT1G23160 37.716 578 334 10 47 610 13 578 1.03e-135 409
MS.gene86023.t1 AT2G14960 38.421 570 332 9 50 611 21 579 1.07e-135 409
MS.gene86023.t1 AT1G59500 39.123 570 331 9 50 609 22 585 3.18e-134 405
MS.gene86023.t1 AT5G13320 37.306 579 339 10 46 609 5 574 9.89e-133 400
MS.gene86023.t1 AT5G13320 37.306 579 339 10 46 609 5 574 9.89e-133 400
MS.gene86023.t1 AT5G13320 37.306 579 339 10 46 609 20 589 1.22e-132 401
MS.gene86023.t1 AT1G48660 36.332 567 344 8 52 609 7 565 6.02e-130 394
MS.gene86023.t1 AT1G48660 36.316 570 343 9 52 609 7 568 1.12e-129 393
MS.gene86023.t1 AT5G54510 36.585 574 340 6 55 609 28 596 1.17e-128 391
MS.gene86023.t1 AT5G51470 37.197 578 342 9 41 609 6 571 8.26e-126 383
MS.gene86023.t1 AT5G13360 37.457 582 334 12 47 609 9 579 2.72e-121 372
MS.gene86023.t1 AT5G13360 37.457 582 334 12 47 609 9 579 2.72e-121 372
MS.gene86023.t1 AT5G13360 37.457 582 334 12 47 609 87 657 2.08e-120 372
MS.gene86023.t1 AT5G13370 35.775 587 351 12 42 609 1 580 1.52e-119 367
MS.gene86023.t1 AT5G13350 35.025 591 350 15 42 609 1 580 7.21e-119 365
MS.gene86023.t1 AT5G13350 35.025 591 350 15 42 609 1 580 7.21e-119 365
MS.gene86023.t1 AT2G47750 36.034 580 353 10 43 609 3 577 8.11e-117 360
MS.gene86023.t1 AT5G13380 35.664 572 342 12 55 609 47 609 4.12e-114 354
MS.gene86023.t1 AT1G28130 33.890 599 349 12 47 609 9 596 4.64e-112 348
MS.gene86023.t1 AT5G51470 36.646 483 290 6 136 609 6 481 4.78e-101 316
MS.gene86023.t1 AT1G48670 32.155 566 316 11 54 609 10 517 5.11e-99 312
MS.gene86023.t1 AT1G48670 35.049 408 251 6 210 609 5 406 5.41e-89 282
MS.gene86023.t1 AT1G28130 36.190 420 225 9 223 609 44 453 7.12e-85 273
MS.gene86023.t1 AT1G48690 34.197 193 112 4 52 238 7 190 2.41e-23 98.2

Find 123 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTTATGGCCTTGCCATTT+TGG 0.154823 8.2:-69481256 None:intergenic
GGAAACACTGAAGAAGATTT+TGG 0.215335 8.2:+69480266 MS.gene86023:CDS
ACACATGCCTTGAAACTTTC+AGG 0.224304 8.2:-69480345 None:intergenic
CAGGACACTATGTTATCTTT+TGG 0.231173 8.2:+69483102 MS.gene86023:CDS
AACATAGTGTCCTGGTTCTT+TGG 0.254133 8.2:-69483093 None:intergenic
CCTTTGTTGACTTCTGAGTA+TGG 0.254938 8.2:+69481809 MS.gene86023:CDS
TCAGAACCTTTGAACAAGTT+TGG 0.258443 8.2:+69481531 MS.gene86023:CDS
TAGAGTGATTGGTGAAAATT+AGG 0.278144 8.2:-69481425 None:intergenic
ATTGGTTACTTACAAAGATT+TGG 0.278435 8.2:+69480371 MS.gene86023:CDS
CTTGAACATTATGTTGGATT+AGG 0.286844 8.2:+69483281 MS.gene86023:CDS
TGTGTTCTTGTCAATGTTGA+TGG 0.287226 8.2:-69482976 None:intergenic
CATAATGTTCAAGAATCTTC+TGG 0.290500 8.2:-69483271 None:intergenic
GCAAACTCAGGAGCCACTTT+AGG 0.305629 8.2:-69481866 None:intergenic
AGGGGATGTGGTAAGGGTTA+TGG 0.307891 8.2:+69482896 MS.gene86023:CDS
ATTCCTTTGAATCAACTTGA+TGG 0.320686 8.2:+69481929 MS.gene86023:CDS
CAGAACCTTTGAACAAGTTT+GGG 0.324841 8.2:+69481532 MS.gene86023:CDS
CCTTGAACATACTTAACATT+AGG 0.332140 8.2:-69481725 None:intergenic
GGGGATGTGGTAAGGGTTAT+GGG 0.337169 8.2:+69482897 MS.gene86023:CDS
TGGATCAAGTTAGCTAGTTC+AGG 0.340099 8.2:-69481650 None:intergenic
TCAACTATTCTATTGATATA+AGG 0.342032 8.2:-69480396 None:intergenic
CTTGAGCCAGTGGGGTTAAC+TGG 0.350859 8.2:+69481965 MS.gene86023:CDS
GTCGATGCCGCTGAATTTCA+TGG 0.367139 8.2:+69478880 None:intergenic
GTTGTTAGCTGAAGAGAAAA+TGG 0.368303 8.2:+69483037 MS.gene86023:CDS
TTCATTGCATGCTTGTATCC+TGG 0.373701 8.2:-69481356 None:intergenic
AAGTTAGCTAGTTCAGGATT+TGG 0.373912 8.2:-69481644 None:intergenic
GCTGAATACTTGCAGAGTTT+AGG 0.375997 8.2:+69480303 MS.gene86023:CDS
CAAAGTGTTGCAAATATTGT+TGG 0.386965 8.2:+69483355 MS.gene86023:CDS
AGAGAGTTTCCTATCCAAAA+TGG 0.404103 8.2:+69481242 MS.gene86023:intron
GCTGCTGTAGATGAAGCTTA+TGG 0.404214 8.2:-69481270 None:intergenic
AATGCATAGGATTGAGCAAT+TGG 0.406780 8.2:+69481678 MS.gene86023:CDS
CCTAATGTTAAGTATGTTCA+AGG 0.408097 8.2:+69481725 MS.gene86023:CDS
GTGCAGGCTTATACAGATAT+AGG 0.409763 8.2:+69482871 MS.gene86023:intron
AGTATGGTTCTTCTGAAGGT+TGG 0.412179 8.2:+69481825 MS.gene86023:CDS
TGGTGAATGTTGTACATGTT+TGG 0.416776 8.2:+69483157 MS.gene86023:CDS
TCCGAACAAGTCGGAGTTCA+AGG 0.425031 8.2:-69483238 None:intergenic
CAATCACTGCTATCTCCTTA+AGG 0.427592 8.2:+69480451 MS.gene86023:CDS
CTTAAGGAGATAGCAGTGAT+TGG 0.436756 8.2:-69480450 None:intergenic
GCAAACTATCACAAGCTAAA+GGG 0.436897 8.2:+69481291 MS.gene86023:CDS
AACTGATCCTGAAAGTTTCA+AGG 0.439419 8.2:+69480338 MS.gene86023:CDS
CCTGTTCCTAAAGGCAAAAG+AGG 0.441171 8.2:-69480662 None:intergenic
CACACCTAGGTGTCTTGAAC+TGG 0.446897 8.2:-69483316 None:intergenic
CAACAATATTTGCAACACTT+TGG 0.447856 8.2:-69483354 None:intergenic
GAATCAACTTGATGGAACTA+AGG 0.452348 8.2:+69481937 MS.gene86023:CDS
TCTGAGTATGGTTCTTCTGA+AGG 0.455124 8.2:+69481821 MS.gene86023:CDS
TATATCAATAGAATAGTTGA+TGG 0.455629 8.2:+69480399 MS.gene86023:CDS
ATGAAAGCACTTCAATCTCC+TGG 0.455873 8.2:+69481374 MS.gene86023:CDS
TGCAACACTTTGGTGTTTGT+AGG 0.456160 8.2:-69483344 None:intergenic
AAGATTCTTGAACATTATGT+TGG 0.462415 8.2:+69483275 MS.gene86023:CDS
AATTCAAAGTAAGCAATTTG+AGG 0.463474 8.2:-69481905 None:intergenic
TTGCAGAGTTTAGGACTCAA+TGG 0.466761 8.2:+69480312 MS.gene86023:CDS
CAGATATAGGCTAGGGGATG+TGG 0.467515 8.2:+69482884 MS.gene86023:CDS
ATAGGCTAGGGGATGTGGTA+AGG 0.468129 8.2:+69482889 MS.gene86023:CDS
GTTCCATCAAGTTGATTCAA+AGG 0.473335 8.2:-69481932 None:intergenic
CCCTTGAACTCCGACTTGTT+CGG 0.477568 8.2:+69483237 MS.gene86023:CDS
GAGAGGCTAACAAAGGATGC+TGG 0.479734 8.2:+69480231 MS.gene86023:CDS
TTTCAAGGCATGTGTTCCAT+TGG 0.481683 8.2:+69480353 MS.gene86023:CDS
CAATGTTGATGGTGAGCATA+AGG 0.486689 8.2:-69482965 None:intergenic
TGTAGTTCTGGTACTAGTCA+AGG 0.489759 8.2:+69480577 MS.gene86023:intron
AGCAAACTATCACAAGCTAA+AGG 0.491878 8.2:+69481290 MS.gene86023:CDS
GCCAATGTATTCAGAAATCC+AGG 0.494020 8.2:+69481338 MS.gene86023:CDS
AGAGGTGGCAGTAGAGTGAT+TGG 0.496209 8.2:-69481436 None:intergenic
GAAGATTGGTGAAGATTATG+AGG 0.505123 8.2:+69481991 MS.gene86023:CDS
CTCTACTGCCACCTCTTATG+TGG 0.505432 8.2:+69481443 MS.gene86023:CDS
TAGGCTAGGGGATGTGGTAA+GGG 0.506564 8.2:+69482890 MS.gene86023:CDS
TGCAAAGCAGTCCACATAAG+AGG 0.507954 8.2:-69481454 None:intergenic
GGATGCTGGGAATGTTCAAA+AGG 0.507958 8.2:+69480245 MS.gene86023:CDS
GACATAGCAGTTCTAATGGA+TGG 0.509602 8.2:-69481608 None:intergenic
TTCTTCCCAAACTTGTTCAA+AGG 0.512345 8.2:-69481537 None:intergenic
TCAAACAATTCATCATTCCA+TGG 0.514252 8.2:-69480616 None:intergenic
ATAGTAATACCTGTTCCTAA+AGG 0.516100 8.2:-69480671 None:intergenic
ACATCATGAGGGCTGCATCC+AGG 0.522874 8.2:-69481392 None:intergenic
TCAATCCTATGCATTTCTTG+TGG 0.525426 8.2:-69481670 None:intergenic
TTCAAATGTAAATCCTAAAG+TGG 0.533775 8.2:+69481853 MS.gene86023:CDS
CTTATTACTGACATCAAAGA+AGG 0.535229 8.2:+69481560 MS.gene86023:CDS
ATTTCTGAATACATTGGCTG+TGG 0.541655 8.2:-69481333 None:intergenic
AGGGATCATGACTGGTGCAA+TGG 0.543132 8.2:+69481745 MS.gene86023:CDS
TTGATAACAGCTGCAGGTGA+AGG 0.545506 8.2:+69480147 MS.gene86023:intron
TGAAGGAGTTGTGAAGATGA+AGG 0.551299 8.2:+69480164 MS.gene86023:CDS
GCTTATACAGATATAGGCTA+GGG 0.552915 8.2:+69482877 MS.gene86023:CDS
CCGAACAAGTCGGAGTTCAA+GGG 0.559483 8.2:-69483237 None:intergenic
AGAGGCTAACAAAGGATGCT+GGG 0.561325 8.2:+69480232 MS.gene86023:CDS
GGGTTAACTGGTGTGAAGAT+TGG 0.563355 8.2:+69481977 MS.gene86023:CDS
AAGGTAGAGCTTGAGCCAGT+GGG 0.565600 8.2:+69481956 MS.gene86023:CDS
TATGTTCAAGGGATCATGAC+TGG 0.568493 8.2:+69481737 MS.gene86023:CDS
AAATCTTTGTAAGTAACCAA+TGG 0.572733 8.2:-69480369 None:intergenic
TTCACACCAGTTAACCCCAC+TGG 0.574263 8.2:-69481971 None:intergenic
CAAAAGATAACATAGTGTCC+TGG 0.574844 8.2:-69483101 None:intergenic
GGCTTATACAGATATAGGCT+AGG 0.576800 8.2:+69482876 MS.gene86023:intron
TCCTGGATTTCTGAATACAT+TGG 0.580005 8.2:-69481339 None:intergenic
TAAGGTAGAGCTTGAGCCAG+TGG 0.580352 8.2:+69481955 MS.gene86023:CDS
TTTCTCTTCAGCTAACAACA+TGG 0.580961 8.2:-69483033 None:intergenic
CAAACTATCACAAGCTAAAG+GGG 0.586566 8.2:+69481292 MS.gene86023:CDS
CTAATGTTAAGTATGTTCAA+GGG 0.588492 8.2:+69481726 MS.gene86023:CDS
GGACTGAAAATCACATCATG+AGG 0.590486 8.2:-69481404 None:intergenic
TTGATCCACAAGAAATGCAT+AGG 0.591375 8.2:+69481665 MS.gene86023:CDS
GAATGATTTACAATTATCAG+TGG 0.599036 8.2:+69483001 MS.gene86023:CDS
GAACAGCGGCATGGCAACGA+CGG 0.599700 8.2:+69478950 MS.gene86023:CDS
AAGTGATAGAAGAATTTGAG+AGG 0.600729 8.2:+69480214 MS.gene86023:CDS
ACAACATAAGTAGCAAACTC+AGG 0.609304 8.2:-69481878 None:intergenic
GTTAGTTCTAGAAAAGTCAA+AGG 0.611504 8.2:+69483206 MS.gene86023:CDS
CAGCGGCATGGCAACGACGG+TGG 0.613557 8.2:+69478953 MS.gene86023:CDS
AATAATTGAGAAATTTGACA+TGG 0.619152 8.2:+69480188 MS.gene86023:CDS
ATAGGATTGAGCAATTGGTA+TGG 0.622644 8.2:+69481683 MS.gene86023:CDS
TAGAAAAGTCAAAGGTATTG+CGG 0.623191 8.2:+69483214 MS.gene86023:CDS
GAACTCCGACTTGTTCGGAA+AGG 0.630222 8.2:+69483242 MS.gene86023:CDS
ATTGAGACACTATGCAGGAG+AGG 0.630904 8.2:+69481784 MS.gene86023:CDS
AGAATTTGAGAGGCTAACAA+AGG 0.640125 8.2:+69480224 MS.gene86023:CDS
ATGTTCCTTTCCGAACAAGT+CGG 0.642426 8.2:-69483247 None:intergenic
GTTTCCTATCCAAAATGGCA+AGG 0.645200 8.2:+69481247 MS.gene86023:CDS
AAATCACATGAACAGCGGCA+TGG 0.649699 8.2:+69478941 MS.gene86023:CDS
TGAGCCAGTTCAAGACACCT+AGG 0.654988 8.2:+69483312 MS.gene86023:CDS
TTTGTAGGAGCAACACACCT+AGG 0.657654 8.2:-69483329 None:intergenic
GAAGCAAGTGATGAAGTGCT+TGG 0.664960 8.2:+69483137 MS.gene86023:CDS
ATTGATTTATCCAAAGAACC+AGG 0.665402 8.2:+69483083 MS.gene86023:CDS
TAGGCTGCCATGAAATTCAG+CGG 0.667431 8.2:-69478887 None:intergenic
GACTGAAAATCACATCATGA+GGG 0.670586 8.2:-69481403 None:intergenic
CCATACTCAGAAGTCAACAA+AGG 0.673745 8.2:-69481809 None:intergenic
AAAGCAGTCCACATAAGAGG+TGG 0.677682 8.2:-69481451 None:intergenic
CTTATACAGATATAGGCTAG+GGG 0.689485 8.2:+69482878 MS.gene86023:CDS
AGGTAGAGCTTGAGCCAGTG+GGG 0.703294 8.2:+69481957 MS.gene86023:CDS
CTGTAAAATCACATGAACAG+CGG 0.707689 8.2:+69478936 MS.gene86023:CDS
AAACTATCACAAGCTAAAGG+GGG 0.711603 8.2:+69481293 MS.gene86023:CDS
GGTTTGATATATCTGCACTG+TGG 0.735598 8.2:-69480641 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTATTATTAAAAAAATA+TGG - chr8.2:69479892-69479911 None:intergenic 0.0%
!! AAAAAAATAATCTTCATTAT+GGG + chr8.2:69479529-69479548 MS.gene86023:intron 10.0%
!! TAACTAATTTATAAAATGAT+AGG - chr8.2:69482209-69482228 None:intergenic 10.0%
!! AACATAATTAGACTTAATAA+AGG - chr8.2:69482828-69482847 None:intergenic 15.0%
!! CAAAAAAATAATCTTCATTA+TGG + chr8.2:69479528-69479547 MS.gene86023:intron 15.0%
!!! ACTTTTCATTTTTATTGTAT+GGG + chr8.2:69482642-69482661 MS.gene86023:intron 15.0%
!!! AGTTTTTTCTTTAATTAGAA+AGG + chr8.2:69479020-69479039 MS.gene86023:intron 15.0%
!!! CATAATGAAGATTATTTTTT+TGG - chr8.2:69479530-69479549 None:intergenic 15.0%
!!! TACTTTTCATTTTTATTGTA+TGG + chr8.2:69482641-69482660 MS.gene86023:intron 15.0%
!!! TTCATTTTATAAATCATTAC+TGG + chr8.2:69480832-69480851 MS.gene86023:intron 15.0%
!! AAAGGACAATAATAAAAAAG+TGG - chr8.2:69479558-69479577 None:intergenic 20.0%
!! AAGGACAATAATAAAAAAGT+GGG - chr8.2:69479557-69479576 None:intergenic 20.0%
!! AATAATTGAGAAATTTGACA+TGG + chr8.2:69480188-69480207 MS.gene86023:CDS 20.0%
!! CTTAAGAAGAGAAAAAAAAA+AGG - chr8.2:69482060-69482079 None:intergenic 20.0%
!! TATAAATTAGTTAATGTGTC+AGG + chr8.2:69482216-69482235 MS.gene86023:intron 20.0%
!! TATATCAATAGAATAGTTGA+TGG + chr8.2:69480399-69480418 MS.gene86023:CDS 20.0%
!! TCAACTATTCTATTGATATA+AGG - chr8.2:69480399-69480418 None:intergenic 20.0%
!!! CTTCTTTTTAAAAACATCAT+CGG + chr8.2:69481041-69481060 MS.gene86023:intron 20.0%
!!! TATTAGTCCCTAAATATTTT+AGG - chr8.2:69482157-69482176 None:intergenic 20.0%
!!! TCACTAGGATTTTTTTTAAA+AGG - chr8.2:69482795-69482814 None:intergenic 20.0%
!!! TCTCTAAAGTATAAAAAAAC+CGG - chr8.2:69482183-69482202 None:intergenic 20.0%
!!! TTATGTTTTGTTTTTGTCTA+GGG + chr8.2:69482326-69482345 MS.gene86023:intron 20.0%
!!! TTTATGTTTTGTTTTTGTCT+AGG + chr8.2:69482325-69482344 MS.gene86023:intron 20.0%
! AAACTTTCAATATCAAGTGT+CGG + chr8.2:69481162-69481181 MS.gene86023:intron 25.0%
! AAATCTTTGTAAGTAACCAA+TGG - chr8.2:69480372-69480391 None:intergenic 25.0%
! AAGATTCTTGAACATTATGT+TGG + chr8.2:69483275-69483294 MS.gene86023:CDS 25.0%
! AATTATGGAGGAATTGATTA+GGG + chr8.2:69482539-69482558 MS.gene86023:intron 25.0%
! AATTCAAAGTAAGCAATTTG+AGG - chr8.2:69481908-69481927 None:intergenic 25.0%
! AGAGACTACCTAAAATATTT+AGG + chr8.2:69482146-69482165 MS.gene86023:intron 25.0%
! AGGACAATAATAAAAAAGTG+GGG - chr8.2:69479556-69479575 None:intergenic 25.0%
! AGTATAAGGAAGGAATTATA+AGG - chr8.2:69479599-69479618 None:intergenic 25.0%
! ATGTTAGTGACAATTAATCT+TGG + chr8.2:69482843-69482862 MS.gene86023:intron 25.0%
! ATTGGTTACTTACAAAGATT+TGG + chr8.2:69480371-69480390 MS.gene86023:CDS 25.0%
! CCTTATACTAAGAAAAAGTT+TGG + chr8.2:69479610-69479629 MS.gene86023:intron 25.0%
! CTAATGTTAAGTATGTTCAA+GGG + chr8.2:69481726-69481745 MS.gene86023:CDS 25.0%
! GAAAGCAAAAATATATACCA+TGG + chr8.2:69480599-69480618 MS.gene86023:CDS 25.0%
! GAATGATTTACAATTATCAG+TGG + chr8.2:69483001-69483020 MS.gene86023:CDS 25.0%
! GAGACTACCTAAAATATTTA+GGG + chr8.2:69482147-69482166 MS.gene86023:intron 25.0%
! GGATACAAATTACCTAAATT+TGG - chr8.2:69482728-69482747 None:intergenic 25.0%
! GGTACATATTTAATGTGATT+AGG - chr8.2:69482774-69482793 None:intergenic 25.0%
! GTAATTAAATATTGAGTGAG+TGG + chr8.2:69482514-69482533 MS.gene86023:intron 25.0%
! TACATAACAAATGTTACACA+AGG + chr8.2:69482600-69482619 MS.gene86023:intron 25.0%
! TATTTAGGGACTAATATAAC+CGG + chr8.2:69482161-69482180 MS.gene86023:intron 25.0%
! TCATTTGAAAGGTTAGAATT+TGG + chr8.2:69479103-69479122 MS.gene86023:intron 25.0%
! TTCAAATGTAAATCCTAAAG+TGG + chr8.2:69481853-69481872 MS.gene86023:CDS 25.0%
! TTTCTCTTCTTAAGATGTTA+GGG + chr8.2:69482066-69482085 MS.gene86023:intron 25.0%
!! ATATACTAGTAGTGTGTTTT+TGG + chr8.2:69482453-69482472 MS.gene86023:intron 25.0%
!! CATTTTTATTGTATGGGATT+GGG + chr8.2:69482648-69482667 MS.gene86023:intron 25.0%
!! CTTGATATTGAAAGTTTGTT+TGG - chr8.2:69481159-69481178 None:intergenic 25.0%
!! TTAATGTATTGATGCTATGT+AGG - chr8.2:69480737-69480756 None:intergenic 25.0%
!! TTTTCTCTTCTTAAGATGTT+AGG + chr8.2:69482065-69482084 MS.gene86023:intron 25.0%
!!! ACTTTTTCTTAGTATAAGGA+AGG - chr8.2:69479609-69479628 None:intergenic 25.0%
!!! ATAAATATTTTAGTACCTGC+AGG - chr8.2:69482031-69482050 None:intergenic 25.0%
!!! CCAAACTTTTTCTTAGTATA+AGG - chr8.2:69479613-69479632 None:intergenic 25.0%
!!! TCATTTTTATTGTATGGGAT+TGG + chr8.2:69482647-69482666 MS.gene86023:intron 25.0%
!!! TGTCTCAATTTTTTCACATA+AGG - chr8.2:69481773-69481792 None:intergenic 25.0%
AAAAAATTGAGACACTATGC+AGG + chr8.2:69481779-69481798 MS.gene86023:CDS 30.0%
AAAGGTGAGAAAATTTCACT+AGG - chr8.2:69482810-69482829 None:intergenic 30.0%
AAGAATATAATCAACTGTGC+TGG - chr8.2:69482305-69482324 None:intergenic 30.0%
AAGTGATAGAAGAATTTGAG+AGG + chr8.2:69480214-69480233 MS.gene86023:CDS 30.0%
ATAGTAATACCTGTTCCTAA+AGG - chr8.2:69480674-69480693 None:intergenic 30.0%
ATGTACTTTGTTCCTTATGT+AGG - chr8.2:69482750-69482769 None:intergenic 30.0%
ATGTTAGGGACTAATATGAT+GGG + chr8.2:69482080-69482099 MS.gene86023:intron 30.0%
ATTAATCTTGGATAATGTGC+AGG + chr8.2:69482855-69482874 MS.gene86023:intron 30.0%
ATTCCTTTGAATCAACTTGA+TGG + chr8.2:69481929-69481948 MS.gene86023:CDS 30.0%
CAAAAATCAAGTTTCTTCGT+AGG + chr8.2:69482937-69482956 MS.gene86023:CDS 30.0%
CAACAATATTTGCAACACTT+TGG - chr8.2:69483357-69483376 None:intergenic 30.0%
CAATTATGGAGGAATTGATT+AGG + chr8.2:69482538-69482557 MS.gene86023:intron 30.0%
CATAATGTTCAAGAATCTTC+TGG - chr8.2:69483274-69483293 None:intergenic 30.0%
CATCATGAAAATTCTCATCT+TGG - chr8.2:69479465-69479484 None:intergenic 30.0%
CATTAGAAAGAACAAAGCAA+AGG - chr8.2:69479739-69479758 None:intergenic 30.0%
CCTAATGTTAAGTATGTTCA+AGG + chr8.2:69481725-69481744 MS.gene86023:CDS 30.0%
CCTTGAACATACTTAACATT+AGG - chr8.2:69481728-69481747 None:intergenic 30.0%
CTACTTTGTTCTGTTACAAT+GGG + chr8.2:69482268-69482287 MS.gene86023:intron 30.0%
CTTATTACTGACATCAAAGA+AGG + chr8.2:69481560-69481579 MS.gene86023:CDS 30.0%
CTTGAACATTATGTTGGATT+AGG + chr8.2:69483281-69483300 MS.gene86023:CDS 30.0%
TAAATAAGAGACCTTCAATG+AGG - chr8.2:69479345-69479364 None:intergenic 30.0%
TAAATTGAAGTCACCTTTGA+CGG + chr8.2:69480754-69480773 MS.gene86023:intron 30.0%
TAGAGTGATTGGTGAAAATT+AGG - chr8.2:69481428-69481447 None:intergenic 30.0%
TATCTTAGATACCTCATTGA+AGG + chr8.2:69479331-69479350 MS.gene86023:intron 30.0%
TATGTAGTCAAATCAATGAG+TGG - chr8.2:69480105-69480124 None:intergenic 30.0%
TCAAACAATTCATCATTCCA+TGG - chr8.2:69480619-69480638 None:intergenic 30.0%
TGTACTTTGTTCCTTATGTA+GGG - chr8.2:69482749-69482768 None:intergenic 30.0%
TTAACATTAGGAAAAAGCTC+TGG - chr8.2:69481716-69481735 None:intergenic 30.0%
TTTGCACTATTTGCTTCTAT+TGG + chr8.2:69479384-69479403 MS.gene86023:intron 30.0%
! AGAGTGGTTATTGTGAATTT+TGG + chr8.2:69482357-69482376 MS.gene86023:intron 30.0%
! AGGACACTATGTTATCTTTT+GGG + chr8.2:69483103-69483122 MS.gene86023:CDS 30.0%
! ATTATAAGGTAGCCCTTTTA+AGG - chr8.2:69479585-69479604 None:intergenic 30.0%
! ATTGATTTATCCAAAGAACC+AGG + chr8.2:69483083-69483102 MS.gene86023:CDS 30.0%
! ATTTTCAAAATCCATTCTGC+TGG + chr8.2:69479819-69479838 MS.gene86023:intron 30.0%
! CTACGAAGAAACTTGATTTT+TGG - chr8.2:69482939-69482958 None:intergenic 30.0%
! CTTTGCTTTGTTCTTTCTAA+TGG + chr8.2:69479737-69479756 MS.gene86023:intron 30.0%
! GATAAAGCTTTTAGCACAAA+TGG + chr8.2:69482574-69482593 MS.gene86023:intron 30.0%
! GTAATTTGTATCCCTACATA+AGG + chr8.2:69482735-69482754 MS.gene86023:intron 30.0%
! TGTCCTTTTTACCCTTAAAA+GGG + chr8.2:69479570-69479589 MS.gene86023:intron 30.0%
! TTATAAGGTAGCCCTTTTAA+GGG - chr8.2:69479584-69479603 None:intergenic 30.0%
! TTGTCCTTTTTACCCTTAAA+AGG + chr8.2:69479569-69479588 MS.gene86023:intron 30.0%
! TTTGCAAAGAACCATACTTT+TGG + chr8.2:69479492-69479511 MS.gene86023:intron 30.0%
! TTTTCAAAATCCATTCTGCT+GGG + chr8.2:69479820-69479839 MS.gene86023:intron 30.0%
!! AAATTCTCATCTTGGTTTTC+TGG - chr8.2:69479457-69479476 None:intergenic 30.0%
!! AACTTGTGTTTTTGTAGTTC+TGG + chr8.2:69480565-69480584 MS.gene86023:intron 30.0%
!! ATGAAGCATTGACACTTAAA+TGG - chr8.2:69481072-69481091 None:intergenic 30.0%
!! CAAAGTGTTGCAAATATTGT+TGG + chr8.2:69483355-69483374 MS.gene86023:CDS 30.0%
!! GTTAGTTCTAGAAAAGTCAA+AGG + chr8.2:69483206-69483225 MS.gene86023:CDS 30.0%
!! TAGAAAAGTCAAAGGTATTG+CGG + chr8.2:69483214-69483233 MS.gene86023:CDS 30.0%
!! TATTTGCTTCTATTGGTTCT+AGG + chr8.2:69479391-69479410 MS.gene86023:intron 30.0%
!! TTTTGACATAGCAGTTCTAA+TGG - chr8.2:69481615-69481634 None:intergenic 30.0%
!!! AAGAGTGTTTTCATACCTTA+AGG - chr8.2:69480469-69480488 None:intergenic 30.0%
!!! ATGATGGGTTTTCATACTTT+AGG + chr8.2:69482095-69482114 MS.gene86023:intron 30.0%
!!! CAACTTTTTCACATTCAACT+GGG - chr8.2:69480508-69480527 None:intergenic 30.0%
!!! GTGTTTTTGGAAAGATTGAA+TGG + chr8.2:69482466-69482485 MS.gene86023:intron 30.0%
!!! TCAACTTTTTCACATTCAAC+TGG - chr8.2:69480509-69480528 None:intergenic 30.0%
!!! TGATTTTTGGAGTTGAGTTA+TGG - chr8.2:69482926-69482945 None:intergenic 30.0%
AAACTATCACAAGCTAAAGG+GGG + chr8.2:69481293-69481312 MS.gene86023:CDS 35.0%
AACTGATCCTGAAAGTTTCA+AGG + chr8.2:69480338-69480357 MS.gene86023:CDS 35.0%
AAGAAATAACAAGTGACACG+TGG + chr8.2:69479043-69479062 MS.gene86023:intron 35.0%
AAGCCAAAGACTATTGAAGT+TGG - chr8.2:69480008-69480027 None:intergenic 35.0%
AAGTTAGCTAGTTCAGGATT+TGG - chr8.2:69481647-69481666 None:intergenic 35.0%
AATGCATAGGATTGAGCAAT+TGG + chr8.2:69481678-69481697 MS.gene86023:CDS 35.0%
ACAACATAAGTAGCAAACTC+AGG - chr8.2:69481881-69481900 None:intergenic 35.0%
ACAGAAAGATAGGAGGATAA+AGG - chr8.2:69479131-69479150 None:intergenic 35.0%
ACCTAAATTTGGTCCCATAA+AGG - chr8.2:69482717-69482736 None:intergenic 35.0%
ACCTTTATGGGACCAAATTT+AGG + chr8.2:69482713-69482732 MS.gene86023:intron 35.0%
ACGCGTCAATAATGTTTCAT+AGG - chr8.2:69481107-69481126 None:intergenic 35.0%
AGAATTTGAGAGGCTAACAA+AGG + chr8.2:69480224-69480243 MS.gene86023:CDS 35.0%
AGAGAGTTTCCTATCCAAAA+TGG + chr8.2:69481242-69481261 MS.gene86023:intron 35.0%
AGCAAACTATCACAAGCTAA+AGG + chr8.2:69481290-69481309 MS.gene86023:CDS 35.0%
ATAGGAAACTCTCTGCATAA+TGG - chr8.2:69481236-69481255 None:intergenic 35.0%
ATAGGATTGAGCAATTGGTA+TGG + chr8.2:69481683-69481702 MS.gene86023:CDS 35.0%
ATTGAGTGAGTGGACAATTA+TGG + chr8.2:69482524-69482543 MS.gene86023:intron 35.0%
ATTTGTGTGTCACATGAATG+TGG - chr8.2:69479181-69479200 None:intergenic 35.0%
CAAAAGATAACATAGTGTCC+TGG - chr8.2:69483104-69483123 None:intergenic 35.0%
CAAACTATCACAAGCTAAAG+GGG + chr8.2:69481292-69481311 MS.gene86023:CDS 35.0%
CAGAACCTTTGAACAAGTTT+GGG + chr8.2:69481532-69481551 MS.gene86023:CDS 35.0%
CTGTAAAATCACATGAACAG+CGG + chr8.2:69478936-69478955 MS.gene86023:CDS 35.0%
GAAGATTGGTGAAGATTATG+AGG + chr8.2:69481991-69482010 MS.gene86023:CDS 35.0%
GAATCAACTTGATGGAACTA+AGG + chr8.2:69481937-69481956 MS.gene86023:CDS 35.0%
GACTGAAAATCACATCATGA+GGG - chr8.2:69481406-69481425 None:intergenic 35.0%
GACTGTCAAAACAGAAAGAT+AGG - chr8.2:69479141-69479160 None:intergenic 35.0%
GATGTTAGGGACTAATATGA+TGG + chr8.2:69482079-69482098 MS.gene86023:intron 35.0%
GCAAACTATCACAAGCTAAA+GGG + chr8.2:69481291-69481310 MS.gene86023:CDS 35.0%
GTGATAGAAAACAACAGAGT+TGG - chr8.2:69479693-69479712 None:intergenic 35.0%
GTTGTTAGCTGAAGAGAAAA+TGG + chr8.2:69483037-69483056 MS.gene86023:CDS 35.0%
TCAATCCTATGCATTTCTTG+TGG - chr8.2:69481673-69481692 None:intergenic 35.0%
TCAGAACCTTTGAACAAGTT+TGG + chr8.2:69481531-69481550 MS.gene86023:CDS 35.0%
TCCTGGATTTCTGAATACAT+TGG - chr8.2:69481342-69481361 None:intergenic 35.0%
TCTAACCTTTCAAATGACAC+AGG - chr8.2:69479100-69479119 None:intergenic 35.0%
TCTCCAACTTCAATAGTCTT+TGG + chr8.2:69480002-69480021 MS.gene86023:intron 35.0%
TGAATGTAACATTGTGAGTG+TGG - chr8.2:69480806-69480825 None:intergenic 35.0%
TGGAAAGATTGAATGGTTAC+TGG + chr8.2:69482473-69482492 MS.gene86023:intron 35.0%
TGGTGAATGTTGTACATGTT+TGG + chr8.2:69483157-69483176 MS.gene86023:CDS 35.0%
TGTCAAAACAGAAAGATAGG+AGG - chr8.2:69479138-69479157 None:intergenic 35.0%
TGTGTTCTTGTCAATGTTGA+TGG - chr8.2:69482979-69482998 None:intergenic 35.0%
TTGATCCACAAGAAATGCAT+AGG + chr8.2:69481665-69481684 MS.gene86023:CDS 35.0%
TTTCTCTTCAGCTAACAACA+TGG - chr8.2:69483036-69483055 None:intergenic 35.0%
TTTGTGTGTCACATGAATGT+GGG - chr8.2:69479180-69479199 None:intergenic 35.0%
! AAGAACCATACTTTTGGCAA+AGG + chr8.2:69479498-69479517 MS.gene86023:intron 35.0%
! AGAACCATACTTTTGGCAAA+GGG + chr8.2:69479499-69479518 MS.gene86023:intron 35.0%
! ATCAAACCTCTTTTGCCTTT+AGG + chr8.2:69480656-69480675 MS.gene86023:CDS 35.0%
! ATTTCTGAATACATTGGCTG+TGG - chr8.2:69481336-69481355 None:intergenic 35.0%
! CAGGACACTATGTTATCTTT+TGG + chr8.2:69483102-69483121 MS.gene86023:CDS 35.0%
! GATTTTTCTCCTATTCTCAC+TGG + chr8.2:69480423-69480442 MS.gene86023:CDS 35.0%
! GCTACTTTGTTCTGTTACAA+TGG + chr8.2:69482267-69482286 MS.gene86023:intron 35.0%
! GGAAACACTGAAGAAGATTT+TGG + chr8.2:69480266-69480285 MS.gene86023:CDS 35.0%
! GTGATTTTACAGCAATCTCT+TGG - chr8.2:69478928-69478947 None:intergenic 35.0%
! TTCTTCCCAAACTTGTTCAA+AGG - chr8.2:69481540-69481559 None:intergenic 35.0%
!! GTTACTTTGCCTTTTATGCT+TGG + chr8.2:69482683-69482702 MS.gene86023:intron 35.0%
!! GTTATCTTTTGGGAAATCAG+TGG + chr8.2:69483113-69483132 MS.gene86023:CDS 35.0%
!! GTTCCATCAAGTTGATTCAA+AGG - chr8.2:69481935-69481954 None:intergenic 35.0%
!! TAGCCCTTTTAAGGGTAAAA+AGG - chr8.2:69479576-69479595 None:intergenic 35.0%
!!! ATCTTGGTTTTCTGGTTTCT+TGG - chr8.2:69479449-69479468 None:intergenic 35.0%
!!! ATTGGTTTTCCAGTGAGAAT+AGG - chr8.2:69480435-69480454 None:intergenic 35.0%
!!! TATTTTAGTACCTGCAGGAT+TGG - chr8.2:69482026-69482045 None:intergenic 35.0%
!!! TGAGTGGCATTTTTTCAGTT+TGG - chr8.2:69480089-69480108 None:intergenic 35.0%
!!! TGCTGTTTTTGCTCTTCTAA+TGG + chr8.2:69478993-69479012 MS.gene86023:intron 35.0%
!!! TTCTGTCTTTGTTTTCCAAC+TGG - chr8.2:69479847-69479866 None:intergenic 35.0%
!!! TTGGTTTAGCTTTTGAGCAT+AGG - chr8.2:69478909-69478928 None:intergenic 35.0%
!!! TTGTTTTTGTCTAGGGTGTA+AGG + chr8.2:69482333-69482352 MS.gene86023:intron 35.0%
ACACATGCCTTGAAACTTTC+AGG - chr8.2:69480348-69480367 None:intergenic 40.0%
ATGTAACATTGTGAGTGTGG+TGG - chr8.2:69480803-69480822 None:intergenic 40.0%
ATGTTCCTTTCCGAACAAGT+CGG - chr8.2:69483250-69483269 None:intergenic 40.0%
CAATCACTGCTATCTCCTTA+AGG + chr8.2:69480451-69480470 MS.gene86023:CDS 40.0%
CAGGCCTTGGATTAATCTAA+CGG + chr8.2:69479074-69479093 MS.gene86023:intron 40.0%
CCATACTCAGAAGTCAACAA+AGG - chr8.2:69481812-69481831 None:intergenic 40.0%
CTTAAGGAGATAGCAGTGAT+TGG - chr8.2:69480453-69480472 None:intergenic 40.0%
GCCAATGTATTCAGAAATCC+AGG + chr8.2:69481338-69481357 MS.gene86023:CDS 40.0%
GCTGAATACTTGCAGAGTTT+AGG + chr8.2:69480303-69480322 MS.gene86023:CDS 40.0%
GGACTGAAAATCACATCATG+AGG - chr8.2:69481407-69481426 None:intergenic 40.0%
GGTTTGATATATCTGCACTG+TGG - chr8.2:69480644-69480663 None:intergenic 40.0%
GTAACAGAACAAAGTAGCAG+TGG - chr8.2:69482265-69482284 None:intergenic 40.0%
GTCATGTCACCAAGCATAAA+AGG - chr8.2:69482695-69482714 None:intergenic 40.0%
GTTTCCTATCCAAAATGGCA+AGG + chr8.2:69481247-69481266 MS.gene86023:CDS 40.0%
TATGTTCAAGGGATCATGAC+TGG + chr8.2:69481737-69481756 MS.gene86023:CDS 40.0%
TCTGAGTATGGTTCTTCTGA+AGG + chr8.2:69481821-69481840 MS.gene86023:CDS 40.0%
TGAAGGAGTTGTGAAGATGA+AGG + chr8.2:69480164-69480183 MS.gene86023:CDS 40.0%
TGGATCAAGTTAGCTAGTTC+AGG - chr8.2:69481653-69481672 None:intergenic 40.0%
TGGCAAACATTGACACATGT+CGG - chr8.2:69480783-69480802 None:intergenic 40.0%
TGTTCAATGTCTGCATGACA+CGG - chr8.2:69480977-69480996 None:intergenic 40.0%
TTCATTGCATGCTTGTATCC+TGG - chr8.2:69481359-69481378 None:intergenic 40.0%
TTGTTGACGTGTCAGTGTTT+GGG - chr8.2:69480906-69480925 None:intergenic 40.0%
TTTAGCTGCCTATGAAGCAT+TGG + chr8.2:69480880-69480899 MS.gene86023:intron 40.0%
TTTCAAGGCATGTGTTCCAT+TGG + chr8.2:69480353-69480372 MS.gene86023:CDS 40.0%
! AACATAGTGTCCTGGTTCTT+TGG - chr8.2:69483096-69483115 None:intergenic 40.0%
! AGTATGGTTCTTCTGAAGGT+TGG + chr8.2:69481825-69481844 MS.gene86023:CDS 40.0%
! CTAATGGTTCAGAGTATCTG+TGG + chr8.2:69479753-69479772 MS.gene86023:intron 40.0%
! CTTGGTGACATGACCTTTAT+GGG + chr8.2:69482701-69482720 MS.gene86023:intron 40.0%
! GAACCATACTTTTGGCAAAG+GGG + chr8.2:69479500-69479519 MS.gene86023:intron 40.0%
! GACAAGTCTTTTGTTGATGC+TGG + chr8.2:69483179-69483198 MS.gene86023:CDS 40.0%
! GACATAGCAGTTCTAATGGA+TGG - chr8.2:69481611-69481630 None:intergenic 40.0%
! TTGCAGAGTTTAGGACTCAA+TGG + chr8.2:69480312-69480331 MS.gene86023:CDS 40.0%
!! ATATGGTGTTATGACCCATG+AGG - chr8.2:69479875-69479894 None:intergenic 40.0%
!! ATGAAAGCACTTCAATCTCC+TGG + chr8.2:69481374-69481393 MS.gene86023:CDS 40.0%
!! CAATGTTGATGGTGAGCATA+AGG - chr8.2:69482968-69482987 None:intergenic 40.0%
!! CCTTTGTTGACTTCTGAGTA+TGG + chr8.2:69481809-69481828 MS.gene86023:CDS 40.0%
!! TGCAACACTTTGGTGTTTGT+AGG - chr8.2:69483347-69483366 None:intergenic 40.0%
!! TGTAGTTCTGGTACTAGTCA+AGG + chr8.2:69480577-69480596 MS.gene86023:intron 40.0%
!! TTCTTGTTGATAACAGCTGC+AGG + chr8.2:69480141-69480160 MS.gene86023:intron 40.0%
AAAGACAGAACTGCACCTCA+TGG + chr8.2:69479857-69479876 MS.gene86023:intron 45.0%
AAAGCAGTCCACATAAGAGG+TGG - chr8.2:69481454-69481473 None:intergenic 45.0%
AAATCACATGAACAGCGGCA+TGG + chr8.2:69478941-69478960 MS.gene86023:CDS 45.0%
AACAAAGTAGCAGTGGTTGG+TGG - chr8.2:69482258-69482277 None:intergenic 45.0%
AAGACAGAACTGCACCTCAT+GGG + chr8.2:69479858-69479877 MS.gene86023:intron 45.0%
ACACCCCTTTGCCAAAAGTA+TGG - chr8.2:69479506-69479525 None:intergenic 45.0%
AGAGGCTAACAAAGGATGCT+GGG + chr8.2:69480232-69480251 MS.gene86023:CDS 45.0%
ATTGAGACACTATGCAGGAG+AGG + chr8.2:69481784-69481803 MS.gene86023:CDS 45.0%
CAGAACAAAGTAGCAGTGGT+TGG - chr8.2:69482261-69482280 None:intergenic 45.0%
CAGGCCGTTAGATTAATCCA+AGG - chr8.2:69479081-69479100 None:intergenic 45.0%
CCTGTTCCTAAAGGCAAAAG+AGG - chr8.2:69480665-69480684 None:intergenic 45.0%
GAACACACATGTTAGACACC+TGG + chr8.2:69480992-69481011 MS.gene86023:intron 45.0%
GAGTGAGTGGACAATTATGG+AGG + chr8.2:69482527-69482546 MS.gene86023:intron 45.0%
GCTGCTGTAGATGAAGCTTA+TGG - chr8.2:69481273-69481292 None:intergenic 45.0%
GGATGCTGGGAATGTTCAAA+AGG + chr8.2:69480245-69480264 MS.gene86023:CDS 45.0%
GGGTTAACTGGTGTGAAGAT+TGG + chr8.2:69481977-69481996 MS.gene86023:CDS 45.0%
GTTGTTGACGTGTCAGTGTT+TGG - chr8.2:69480907-69480926 None:intergenic 45.0%
TAGGCTGCCATGAAATTCAG+CGG - chr8.2:69478890-69478909 None:intergenic 45.0%
TGCAAAGCAGTCCACATAAG+AGG - chr8.2:69481457-69481476 None:intergenic 45.0%
TGTTCGACATCGACATGCTT+TGG - chr8.2:69481136-69481155 None:intergenic 45.0%
TGTTTGGGCCAATGCTTCAT+AGG - chr8.2:69480891-69480910 None:intergenic 45.0%
TTTGTAGGAGCAACACACCT+AGG - chr8.2:69483332-69483351 None:intergenic 45.0%
! GAAGCAAGTGATGAAGTGCT+TGG + chr8.2:69483137-69483156 MS.gene86023:CDS 45.0%
! GCTTGGTGACATGACCTTTA+TGG + chr8.2:69482700-69482719 MS.gene86023:intron 45.0%
! TTGATAACAGCTGCAGGTGA+AGG + chr8.2:69480147-69480166 MS.gene86023:intron 45.0%
!! AACGGCCTGTGTCATTTGAA+AGG + chr8.2:69479092-69479111 MS.gene86023:intron 45.0%
!! AGCTTATGGCCTTGCCATTT+TGG - chr8.2:69481259-69481278 None:intergenic 45.0%
!! CCTCTTTTGCCTTTAGGAAC+AGG + chr8.2:69480662-69480681 MS.gene86023:CDS 45.0%
!! GTTGTTTTCACCAATCCTGC+AGG + chr8.2:69482013-69482032 MS.gene86023:CDS 45.0%
!!! ATGGCCTTGCCATTTTGGAT+AGG - chr8.2:69481254-69481273 None:intergenic 45.0%
AAGGTAGAGCTTGAGCCAGT+GGG + chr8.2:69481956-69481975 MS.gene86023:CDS 50.0%
AGAGGTGGCAGTAGAGTGAT+TGG - chr8.2:69481439-69481458 None:intergenic 50.0%
AGGGATCATGACTGGTGCAA+TGG + chr8.2:69481745-69481764 MS.gene86023:CDS 50.0%
AGGGGATGTGGTAAGGGTTA+TGG + chr8.2:69482896-69482915 MS.gene86023:CDS 50.0%
ATAGGCTAGGGGATGTGGTA+AGG + chr8.2:69482889-69482908 MS.gene86023:CDS 50.0%
CACACCTAGGTGTCTTGAAC+TGG - chr8.2:69483319-69483338 None:intergenic 50.0%
CAGATATAGGCTAGGGGATG+TGG + chr8.2:69482884-69482903 MS.gene86023:CDS 50.0%
CCGAACAAGTCGGAGTTCAA+GGG - chr8.2:69483240-69483259 None:intergenic 50.0%
CGAATGTTACCACATGTGCC+AGG - chr8.2:69481013-69481032 None:intergenic 50.0%
CTCTACTGCCACCTCTTATG+TGG + chr8.2:69481443-69481462 MS.gene86023:CDS 50.0%
CTGCATGACACGGAAACATG+TGG - chr8.2:69480967-69480986 None:intergenic 50.0%
GAGAGGCTAACAAAGGATGC+TGG + chr8.2:69480231-69480250 MS.gene86023:CDS 50.0%
GGGGATGTGGTAAGGGTTAT+GGG + chr8.2:69482897-69482916 MS.gene86023:CDS 50.0%
GTGACACGTGGCATGATAAC+AGG + chr8.2:69479055-69479074 MS.gene86023:intron 50.0%
TAAGGTAGAGCTTGAGCCAG+TGG + chr8.2:69481955-69481974 MS.gene86023:CDS 50.0%
TAGGCTAGGGGATGTGGTAA+GGG + chr8.2:69482890-69482909 MS.gene86023:CDS 50.0%
TCCGAACAAGTCGGAGTTCA+AGG - chr8.2:69483241-69483260 None:intergenic 50.0%
TGAGCCAGTTCAAGACACCT+AGG + chr8.2:69483312-69483331 MS.gene86023:CDS 50.0%
TGGGATTGGGAGAGAAGAAG+TGG + chr8.2:69482661-69482680 MS.gene86023:intron 50.0%
TGTTAGACACCTGGCACATG+TGG + chr8.2:69481001-69481020 MS.gene86023:intron 50.0%
TTCACACCAGTTAACCCCAC+TGG - chr8.2:69481974-69481993 None:intergenic 50.0%
! CCCTTGAACTCCGACTTGTT+CGG + chr8.2:69483237-69483256 MS.gene86023:CDS 50.0%
! GAACTCCGACTTGTTCGGAA+AGG + chr8.2:69483242-69483261 MS.gene86023:CDS 50.0%
! GCAAACTCAGGAGCCACTTT+AGG - chr8.2:69481869-69481888 None:intergenic 50.0%
! GTCTAGGGTGTAAGGTAGAG+TGG + chr8.2:69482341-69482360 MS.gene86023:intron 50.0%
ACATCATGAGGGCTGCATCC+AGG - chr8.2:69481395-69481414 None:intergenic 55.0%
AGGTAGAGCTTGAGCCAGTG+GGG + chr8.2:69481957-69481976 MS.gene86023:CDS 55.0%
ATGGCAACGACGGTGGTGAA+CGG + chr8.2:69478960-69478979 MS.gene86023:intron 55.0%
CACATGTCGGACACCGTCAA+AGG - chr8.2:69480770-69480789 None:intergenic 55.0%
CGTGGCATGATAACAGGCCT+TGG + chr8.2:69479061-69479080 MS.gene86023:intron 55.0%
CTTGAGCCAGTGGGGTTAAC+TGG + chr8.2:69481965-69481984 MS.gene86023:CDS 55.0%
TCCAACTGGACCCAGCAGAA+TGG - chr8.2:69479833-69479852 None:intergenic 55.0%
TCCATTCTGCTGGGTCCAGT+TGG + chr8.2:69479829-69479848 MS.gene86023:intron 55.0%
GAACAGCGGCATGGCAACGA+CGG + chr8.2:69478950-69478969 MS.gene86023:CDS 60.0%
TGGCAACGACGGTGGTGAAC+GGG + chr8.2:69478961-69478980 MS.gene86023:intron 60.0%
CAACGACGGTGGTGAACGGG+TGG + chr8.2:69478964-69478983 MS.gene86023:intron 65.0%
CAGCGGCATGGCAACGACGG+TGG + chr8.2:69478953-69478972 MS.gene86023:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 69478884 69483418 69478884 ID=MS.gene86023
chr8.2 mRNA 69478884 69483418 69478884 ID=MS.gene86023.t1;Parent=MS.gene86023
chr8.2 exon 69478884 69478974 69478884 ID=MS.gene86023.t1.exon1;Parent=MS.gene86023.t1
chr8.2 CDS 69478884 69478974 69478884 ID=cds.MS.gene86023.t1;Parent=MS.gene86023.t1
chr8.2 exon 69480157 69480472 69480157 ID=MS.gene86023.t1.exon2;Parent=MS.gene86023.t1
chr8.2 CDS 69480157 69480472 69480157 ID=cds.MS.gene86023.t1;Parent=MS.gene86023.t1
chr8.2 exon 69480582 69480683 69480582 ID=MS.gene86023.t1.exon3;Parent=MS.gene86023.t1
chr8.2 CDS 69480582 69480683 69480582 ID=cds.MS.gene86023.t1;Parent=MS.gene86023.t1
chr8.2 exon 69481244 69482034 69481244 ID=MS.gene86023.t1.exon4;Parent=MS.gene86023.t1
chr8.2 CDS 69481244 69482034 69481244 ID=cds.MS.gene86023.t1;Parent=MS.gene86023.t1
chr8.2 exon 69482877 69483418 69482877 ID=MS.gene86023.t1.exon5;Parent=MS.gene86023.t1
chr8.2 CDS 69482877 69483418 69482877 ID=cds.MS.gene86023.t1;Parent=MS.gene86023.t1
Gene Sequence

>MS.gene86023

ATGCCGCTGAATTTCATGGCAGCCTATGCTCAAAAGCTAAACCAAGAGATTGCTGTAAAATCACATGAACAGCGGCATGGCAACGACGGTGGTGAACGGGTGGAGAAGTTGCTGTTTTTGCTCTTCTAATGGATGCAGTTTTTTCTTTAATTAGAAAGGAAGAAATAACAAGTGACACGTGGCATGATAACAGGCCTTGGATTAATCTAACGGCCTGTGTCATTTGAAAGGTTAGAATTTGGCTCCTTTATCCTCCTATCTTTCTGTTTTGACAGTCATTCTTTTCTTCTGCTCCCACATTCATGTGACACACAAATAGTCAGTCAAATACTACTCTCTCTCATTTATCTGAGATATTTACGTAATCAACAAAAGTTGATGTATTTAAATTAGATATATTGACTTTTATTTATTCAAGTATCTCTTATAAATAAGATTAGAGAATATTATCTTAGATACCTCATTGAAGGTCTCTTATTTATTTTTTTCACACTTTATTTTTTGCACTATTTGCTTCTATTGGTTCTAGGTTATTCTAACTAGTATATACAGTTATTGAAAACCAAGAAACCAGAAAACCAAGATGAGAATTTTCATGATGTTTTTATTTTGCAAAGAACCATACTTTTGGCAAAGGGGTGTTCCAAAAAAATAATCTTCATTATGGGACCCCACTTTTTTATTATTGTCCTTTTTACCCTTAAAAGGGCTACCTTATAATTCCTTCCTTATACTAAGAAAAAGTTTGGCTCTTATTTCTCTCAGTCTTTTTTTTTTTTTTTTTTGTGAATTTTCTTCTGTACTAGCCAACTCTGTTGTTTTCTATCACTGTCTAATGTTTTTCTAAATTGTCCTTTGCTTTGTTCTTTCTAATGGTTCAGAGTATCTGTGGTACAATTTGTATTTTGACTAATTAACATGTTTCTTCTTAATTCATTTTCAAAATCCATTCTGCTGGGTCCAGTTGGAAAACAAAGACAGAACTGCACCTCATGGGTCATAACACCATATTTTTTTAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAGTAATAGTAATAGTAGTAGTAGTAATAATAAAATAATAAGACAATGTTGTCTCCAACTTCAATAGTCTTTGGCTTTTTCAGAACTTTTCTTTATGTTTATTATAACAATAAAGTATTAGTTATAATAATAATTCCAAACTGAAAAAATGCCACTCATTGATTTGACTACATAATTGTGTGACACTTTTTTCTTGTTGATAACAGCTGCAGGTGAAGGAGTTGTGAAGATGAAGGAAATAATTGAGAAATTTGACATGGAAAAAGTGATAGAAGAATTTGAGAGGCTAACAAAGGATGCTGGGAATGTTCAAAAGGAAACACTGAAGAAGATTTTGGAAGAAAATGCATCAGCTGAATACTTGCAGAGTTTAGGACTCAATGGAAGAACTGATCCTGAAAGTTTCAAGGCATGTGTTCCATTGGTTACTTACAAAGATTTGGAGCCTTATATCAATAGAATAGTTGATGGTGATTTTTCTCCTATTCTCACTGGAAAACCAATCACTGCTATCTCCTTAAGGTATGAAAACACTCTTATTTTCTATTTAGTTTCCCAGTTGAATGTGAAAAAGTTGAATGTGAAAAAGTTAGAAGTTTTTGAATTTGATTAAAAACTTGTGTTTTTGTAGTTCTGGTACTAGTCAAGGAAAGCAAAAATATATACCATGGAATGATGAATTGTTTGAAACCACAGTGCAGATATATCAAACCTCTTTTGCCTTTAGGAACAGGTATTACTATTATTCATATTATTATGCAGCTTCATTTCGTGTATTTTGTTCCTACATAGCATCAATACATTAAATTGAAGTCACCTTTGACGGTGTCCGACATGTGTCAATGTTTGCCACCACACTCACAATGTTACATTCAATCACTTTCATTTTATAAATCATTACTGGCGTCTACATGTCAATGTTTTTTGATTTTAGCTGCCTATGAAGCATTGGCCCAAACACTGACACGTCAACAACAATGATAATTTGAGAAAATTAAAGTAATTGAACATAACCACATGTTTCCGTGTCATGCAGACATTGAACACACATGTTAGACACCTGGCACATGTGGTAACATTCGATCACTATCTTCTTTTTAAAAACATCATCGGCATTTCCATTTAAGTGTCAATGCTTCATAGATTTTTCGTGCCTATGAAACATTATTGACGCGTCTGACACCAAAGCATGTCGATGTCGAACACCAAACAAACTTTCAATATCAAGTGTCGGTTCTACATGAATTTCTGCTAGTTAGAATTTACAGAAGCTAACAAAATTCCATTATGCAGAGAGTTTCCTATCCAAAATGGCAAGGCCATAAGCTTCATCTACAGCAGCAAACTATCACAAGCTAAAGGGGGTGTGACAGTAGCAACAGCCACAGCCAATGTATTCAGAAATCCAGGATACAAGCATGCAATGAAAGCACTTCAATCTCCTGGATGCAGCCCTCATGATGTGATTTTCAGTCCTAATTTTCACCAATCACTCTACTGCCACCTCTTATGTGGACTGCTTTGCAGAGAAGAAATTCAATTAATTTCATCAACATTTGCACATAGCATTGTCTATGCTTTCAGAACCTTTGAACAAGTTTGGGAAGAACTTATTACTGACATCAAAGAAGGTGTTCTTAGCAGTAGAATCACATATCCATCCATTAGAACTGCTATGTCAAAACTTCTGAAACCAAATCCTGAACTAGCTAACTTGATCCACAAGAAATGCATAGGATTGAGCAATTGGTATGGATTGATACCAGAGCTTTTTCCTAATGTTAAGTATGTTCAAGGGATCATGACTGGTGCAATGGAACCTTATGTGAAAAAATTGAGACACTATGCAGGAGAGGTTCCTTTGTTGACTTCTGAGTATGGTTCTTCTGAAGGTTGGATTGCTTCAAATGTAAATCCTAAAGTGGCTCCTGAGTTTGCTACTTATGTTGTTCTTCCTCAAATTGCTTACTTTGAATTCATTCCTTTGAATCAACTTGATGGAACTAAGGTAGAGCTTGAGCCAGTGGGGTTAACTGGTGTGAAGATTGGTGAAGATTATGAGGTTGTTTTCACCAATCCTGCAGGTACTAAAATATTTATTAATAGCCTTTTTTTTTTCTCTTCTTAAGATGTTAGGGACTAATATGATGGGTTTTCATACTTTAGGAATTAAATAGTTAGATTTCATAAACTTTAGAGACTACCTAAAATATTTAGGGACTAATATAACCGGTTTTTTTATACTTTAGAGACTACCTATCATTTTATAAATTAGTTAATGTGTCAGGACTTAAAATCACAATTCCACCAACCACTGCTACTTTGTTCTGTTACAATGGGAAATTTTGATACCAGCACAGTTGATTATATTCTTTTTATGTTTTGTTTTTGTCTAGGGTGTAAGGTAGAGTGGTTATTGTGAATTTTGGTAATGATTATTTTGTGTATTTTTGTTACTACAAAAGTTTTGATTCTTTTGAAATGTTCATCATGAACTTAAGAATATACTAGTAGTGTGTTTTTGGAAAGATTGAATGGTTACTGGTTAGTTTATATTGAGAATGTAATTAAATATTGAGTGAGTGGACAATTATGGAGGAATTGATTAGGGATTTCACTTTCTGATAAAGCTTTTAGCACAAATGGTTATACATAACAAATGTTACACAAGGTAAGTGCTCTAGTGATTTTACTTTTCATTTTTATTGTATGGGATTGGGAGAGAAGAAGTGGTTACTTTGCCTTTTATGCTTGGTGACATGACCTTTATGGGACCAAATTTAGGTAATTTGTATCCCTACATAAGGAACAAAGTACATACCTAATCACATTAAATATGTACCTTTTAAAAAAAATCCTAGTGAAATTTTCTCACCTTTATTAAGTCTAATTATGTTAGTGACAATTAATCTTGGATAATGTGCAGGCTTATACAGATATAGGCTAGGGGATGTGGTAAGGGTTATGGGATTCCATAACTCAACTCCAAAAATCAAGTTTCTTCGTAGGAGCAACCTTATGCTCACCATCAACATTGACAAGAACACAGAGAATGATTTACAATTATCAGTGGAAACAGCATCCATGTTGTTAGCTGAAGAGAAAATGGAAGTGATTGACTACACAAGCTACATTGATTTATCCAAAGAACCAGGACACTATGTTATCTTTTGGGAAATCAGTGGTGAAGCAAGTGATGAAGTGCTTGGTGAATGTTGTACATGTTTGGACAAGTCTTTTGTTGATGCTGGCTATGTTAGTTCTAGAAAAGTCAAAGGTATTGCGGCCCTTGAACTCCGACTTGTTCGGAAAGGAACATTCCAGAAGATTCTTGAACATTATGTTGGATTAGGTGTTGCTGTGAGCCAGTTCAAGACACCTAGGTGTGTTGCTCCTACAAACACCAAAGTGTTGCAAATATTGTTGGAGAATGTTGTTAAGAACTATTTTAGTTCTGCTTACAATTGA
Protein sequence

>MS.gene86023.t1

MPLNFMAAYAQKLNQEIAVKSHEQRHGNDGAAGEGVVKMKEIIEKFDMEKVIEEFERLTKDAGNVQKETLKKILEENASAEYLQSLGLNGRTDPESFKACVPLVTYKDLEPYINRIVDGDFSPILTGKPITAISLSSGTSQGKQKYIPWNDELFETTVQIYQTSFAFRNREFPIQNGKAISFIYSSKLSQAKGGVTVATATANVFRNPGYKHAMKALQSPGCSPHDVIFSPNFHQSLYCHLLCGLLCREEIQLISSTFAHSIVYAFRTFEQVWEELITDIKEGVLSSRITYPSIRTAMSKLLKPNPELANLIHKKCIGLSNWYGLIPELFPNVKYVQGIMTGAMEPYVKKLRHYAGEVPLLTSEYGSSEGWIASNVNPKVAPEFATYVVLPQIAYFEFIPLNQLDGTKVELEPVGLTGVKIGEDYEVVFTNPAGLYRYRLGDVVRVMGFHNSTPKIKFLRRSNLMLTINIDKNTENDLQLSVETASMLLAEEKMEVIDYTSYIDLSKEPGHYVIFWEISGEASDEVLGECCTCLDKSFVDAGYVSSRKVKGIAALELRLVRKGTFQKILEHYVGLGVAVSQFKTPRCVAPTNTKVLQILLENVVKNYFSSAYN