Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86814.t1 | XP_013468838.1 | 99.2 | 368 | 3 | 0 | 1 | 368 | 47 | 414 | 5.30E-221 | 776.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86814.t1 | P14749 | 79.2 | 365 | 76 | 0 | 2 | 366 | 46 | 410 | 9.0e-177 | 620.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86814.t1 | A0A072VXV5 | 99.2 | 368 | 3 | 0 | 1 | 368 | 47 | 414 | 3.8e-221 | 776.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene86814 | MS.gene049391 | PPI |
| MS.gene059347 | MS.gene86814 | PPI |
| MS.gene86814 | MS.gene06516 | PPI |
| MS.gene86814 | MS.gene92764 | PPI |
| MS.gene86814 | MS.gene036941 | PPI |
| MS.gene86814 | MS.gene013419 | PPI |
| MS.gene92763 | MS.gene86814 | PPI |
| MS.gene036942 | MS.gene86814 | PPI |
| MS.gene27500 | MS.gene86814 | PPI |
| MS.gene86814 | MS.gene87685 | PPI |
| MS.gene87684 | MS.gene86814 | PPI |
| MS.gene86814 | MS.gene27501 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86814.t1 | MTR_1g077480 | 99.185 | 368 | 3 | 0 | 1 | 368 | 47 | 414 | 0.0 | 758 |
| MS.gene86814.t1 | MTR_6g086625 | 95.109 | 368 | 18 | 0 | 1 | 368 | 41 | 408 | 0.0 | 736 |
| MS.gene86814.t1 | MTR_6g086575 | 92.391 | 368 | 28 | 0 | 1 | 368 | 40 | 407 | 0.0 | 714 |
| MS.gene86814.t1 | MTR_1g077520 | 86.264 | 364 | 50 | 0 | 2 | 365 | 44 | 407 | 0.0 | 675 |
| MS.gene86814.t1 | MTR_6g069140 | 80.165 | 363 | 72 | 0 | 3 | 365 | 57 | 419 | 0.0 | 625 |
| MS.gene86814.t1 | MTR_1g077520 | 86.598 | 291 | 39 | 0 | 2 | 292 | 44 | 334 | 0.0 | 547 |
| MS.gene86814.t1 | MTR_7g073650 | 65.479 | 365 | 124 | 2 | 3 | 365 | 42 | 406 | 0.0 | 516 |
| MS.gene86814.t1 | MTR_7g073640 | 65.479 | 365 | 124 | 2 | 3 | 365 | 43 | 407 | 0.0 | 515 |
| MS.gene86814.t1 | MTR_3g094160 | 62.534 | 371 | 134 | 3 | 2 | 368 | 59 | 428 | 1.07e-175 | 496 |
| MS.gene86814.t1 | MTR_1g078410 | 62.874 | 167 | 11 | 1 | 1 | 167 | 46 | 161 | 1.86e-66 | 208 |
| MS.gene86814.t1 | MTR_0279s0030 | 54.472 | 123 | 54 | 2 | 245 | 365 | 101 | 223 | 9.91e-40 | 140 |
| MS.gene86814.t1 | MTR_0279s0030 | 54.472 | 123 | 54 | 2 | 245 | 365 | 185 | 307 | 1.57e-38 | 140 |
| MS.gene86814.t1 | MTR_0279s0030 | 54.472 | 123 | 54 | 2 | 245 | 365 | 250 | 372 | 6.20e-38 | 140 |
| MS.gene86814.t1 | MTR_8g089725 | 24.204 | 471 | 238 | 15 | 12 | 366 | 38 | 505 | 8.60e-25 | 105 |
| MS.gene86814.t1 | MTR_8g089735 | 24.628 | 471 | 236 | 17 | 12 | 366 | 38 | 505 | 5.55e-24 | 103 |
| MS.gene86814.t1 | MTR_2g096530 | 27.221 | 349 | 164 | 12 | 12 | 273 | 40 | 385 | 6.62e-22 | 97.8 |
| MS.gene86814.t1 | MTR_3g086580 | 26.611 | 357 | 168 | 12 | 8 | 273 | 36 | 389 | 9.06e-22 | 97.4 |
| MS.gene86814.t1 | MTR_8g089745 | 25.000 | 348 | 174 | 11 | 12 | 274 | 38 | 383 | 3.59e-20 | 92.0 |
| MS.gene86814.t1 | MTR_8g089740 | 25.215 | 349 | 173 | 11 | 12 | 274 | 33 | 379 | 5.88e-20 | 91.7 |
| MS.gene86814.t1 | MTR_8g089745 | 25.000 | 348 | 174 | 11 | 12 | 274 | 38 | 383 | 7.17e-20 | 91.7 |
| MS.gene86814.t1 | MTR_3g086580 | 30.168 | 179 | 96 | 6 | 122 | 273 | 26 | 202 | 6.86e-14 | 73.2 |
| MS.gene86814.t1 | MTR_3g094180 | 48.611 | 72 | 34 | 1 | 278 | 346 | 7 | 78 | 7.25e-13 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86814.t1 | AT5G08370 | 72.951 | 366 | 99 | 0 | 3 | 368 | 31 | 396 | 0.0 | 587 |
| MS.gene86814.t1 | AT5G08370 | 72.951 | 366 | 99 | 0 | 3 | 368 | 5 | 370 | 0.0 | 585 |
| MS.gene86814.t1 | AT5G08380 | 64.208 | 366 | 128 | 2 | 2 | 365 | 44 | 408 | 1.57e-180 | 507 |
| MS.gene86814.t1 | AT3G56310 | 64.305 | 367 | 126 | 4 | 4 | 366 | 65 | 430 | 1.86e-176 | 498 |
| MS.gene86814.t1 | AT3G56310 | 60.218 | 367 | 117 | 5 | 4 | 366 | 65 | 406 | 1.04e-158 | 452 |
| MS.gene86814.t1 | AT5G08380 | 67.033 | 273 | 90 | 0 | 2 | 274 | 44 | 316 | 7.41e-143 | 408 |
| MS.gene86814.t1 | AT3G26380 | 25.788 | 349 | 169 | 12 | 12 | 273 | 42 | 387 | 4.25e-22 | 97.8 |
| MS.gene86814.t1 | AT3G26380 | 25.788 | 349 | 169 | 12 | 12 | 273 | 42 | 387 | 8.15e-22 | 97.4 |
Find 98 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAACTGGCCTTGCTGCTTT+AGG | 0.151894 | 1.3:+55233080 | MS.gene86814:CDS |
| GGGTACAAATATATTAATTT+AGG | 0.200247 | 1.3:+55233101 | MS.gene86814:CDS |
| CTTGCATCAACTATAGTTTC+TGG | 0.211985 | 1.3:-55235352 | None:intergenic |
| TAGTTGATGCAAGAGATTTA+TGG | 0.246206 | 1.3:+55235362 | MS.gene86814:CDS |
| CAACTGGCCTTGCTGCTTTA+GGG | 0.247842 | 1.3:+55233081 | MS.gene86814:CDS |
| ATGCCAAAACATTTGCTTCT+TGG | 0.258381 | 1.3:+55233724 | MS.gene86814:CDS |
| CCAACTATTTCCCACACTTT+TGG | 0.260055 | 1.3:-55234190 | None:intergenic |
| TGGAATAGCTGGAACCATTT+TGG | 0.262090 | 1.3:+55232915 | MS.gene86814:CDS |
| ACAAAGTAGCAGTGGTCTTA+TGG | 0.272566 | 1.3:+55235272 | MS.gene86814:CDS |
| CATTGATATCACAACCAAAA+TGG | 0.277961 | 1.3:-55232929 | None:intergenic |
| ATCGTGCCCATTTCAGCATT+TGG | 0.278804 | 1.3:+55234658 | MS.gene86814:CDS |
| TGCCAAAACATTTGCTTCTT+GGG | 0.296895 | 1.3:+55233725 | MS.gene86814:CDS |
| AAGAGTTATATGTTGCAAAA+TGG | 0.314815 | 1.3:+55231565 | None:intergenic |
| CAGGCGATATAGAAGATAAT+TGG | 0.322906 | 1.3:+55234220 | MS.gene86814:CDS |
| TCAACACAATCATTGGTTTC+GGG | 0.344023 | 1.3:+55235481 | MS.gene86814:CDS |
| CTCAACACAATCATTGGTTT+CGG | 0.346117 | 1.3:+55235480 | MS.gene86814:CDS |
| CTAATGCCCAAATGCTGAAA+TGG | 0.353093 | 1.3:-55234665 | None:intergenic |
| AGTTGATGCAAGAGATTTAT+GGG | 0.361924 | 1.3:+55235363 | MS.gene86814:CDS |
| TCGTGCCCATTTCAGCATTT+GGG | 0.362441 | 1.3:+55234659 | MS.gene86814:CDS |
| TTTAATAAAGCTTCACTCAT+TGG | 0.363260 | 1.3:-55234021 | None:intergenic |
| ACAATGATATTAGGGGAATA+TGG | 0.364125 | 1.3:+55233471 | MS.gene86814:intron |
| GAAAAGCAACAATGATTTAG+AGG | 0.374068 | 1.3:+55234995 | MS.gene86814:CDS |
| TACCCAAGAAGCAAATGTTT+TGG | 0.374219 | 1.3:-55233727 | None:intergenic |
| TAAACGTATGCCTGGATCAT+TGG | 0.378772 | 1.3:+55233686 | MS.gene86814:CDS |
| CAACTATAGTTTCTGGTTCA+AGG | 0.392974 | 1.3:-55235345 | None:intergenic |
| TGTATGTTCTGACACCAAAA+AGG | 0.398154 | 1.3:+55235542 | MS.gene86814:CDS |
| AAATAGGCTCCTCTATTAGT+TGG | 0.398912 | 1.3:+55234780 | MS.gene86814:intron |
| GCAGATAAACTTGGAGTTCA+AGG | 0.405868 | 1.3:+55234963 | MS.gene86814:intron |
| AGAGAAGAAGATCGGCCTTC+CGG | 0.409581 | 1.3:-55234046 | None:intergenic |
| TTATAGATGCAAACGACAAA+TGG | 0.414952 | 1.3:+55234444 | MS.gene86814:CDS |
| AACGTTTCCTTCAGGAATCA+AGG | 0.425374 | 1.3:+55233507 | MS.gene86814:CDS |
| GAAAGTTTAATCCGAGATAC+AGG | 0.426792 | 1.3:+55232951 | MS.gene86814:CDS |
| GTAGCACTCAACACAATCAT+TGG | 0.438786 | 1.3:+55235474 | MS.gene86814:intron |
| TGATCATCAGATGGAATAGC+TGG | 0.439537 | 1.3:+55232904 | MS.gene86814:intron |
| CATAGGAAAGGCTTGAAGTT+GGG | 0.440372 | 1.3:+55233547 | MS.gene86814:CDS |
| TGAAGGAAACGTTGAAACCT+TGG | 0.441110 | 1.3:-55233497 | None:intergenic |
| CTCTAGCTCATTATATTCAT+AGG | 0.449054 | 1.3:+55233530 | MS.gene86814:CDS |
| GCCGACGCAATGGTGTCAAC+TGG | 0.451138 | 1.3:+55233065 | MS.gene86814:intron |
| TTTCCAACTTCAAGCATGTC+AGG | 0.457946 | 1.3:-55234612 | None:intergenic |
| TTTGGTCATGCAGATAAACT+TGG | 0.458528 | 1.3:+55234954 | MS.gene86814:intron |
| AAACGTATGCCTGGATCATT+GGG | 0.461695 | 1.3:+55233687 | MS.gene86814:CDS |
| GACAAATGGGCATCTTATGC+TGG | 0.464580 | 1.3:+55234458 | MS.gene86814:CDS |
| GATCCTGACATGCTTGAAGT+TGG | 0.469508 | 1.3:+55234609 | MS.gene86814:intron |
| TAATGCCCAAATGCTGAAAT+GGG | 0.470549 | 1.3:-55234664 | None:intergenic |
| GGAAATAGTTGGAGAACAAC+AGG | 0.473859 | 1.3:+55234201 | MS.gene86814:CDS |
| GACATGCTTGAAGTTGGAAA+TGG | 0.481080 | 1.3:+55234615 | MS.gene86814:CDS |
| TTGGGAGTTTATTCAGATGC+CGG | 0.485209 | 1.3:+55233565 | MS.gene86814:CDS |
| AAGGTTTCAACGTTTCCTTC+AGG | 0.489184 | 1.3:+55233499 | MS.gene86814:CDS |
| TATATGTTGCAAAATGGACT+TGG | 0.490268 | 1.3:+55231571 | MS.gene86814:CDS |
| CAGCATTTGGGCATTAGCTA+AGG | 0.494033 | 1.3:+55234671 | MS.gene86814:CDS |
| TATGATAATTGTGAAAATAA+CGG | 0.494743 | 1.3:+55233876 | MS.gene86814:CDS |
| GAAGTTATTGCAGTAAATCA+AGG | 0.496776 | 1.3:+55234855 | MS.gene86814:CDS |
| TATAGATGCAAACGACAAAT+GGG | 0.498323 | 1.3:+55234445 | MS.gene86814:CDS |
| TCATAGGAAAGGCTTGAAGT+TGG | 0.501081 | 1.3:+55233546 | MS.gene86814:CDS |
| ATGGGAAGATCCTGCAACGT+GGG | 0.517774 | 1.3:+55234167 | MS.gene86814:CDS |
| ATTTCATGTCCCAATGATCC+AGG | 0.521509 | 1.3:-55233696 | None:intergenic |
| AATAAAGCTTCACTCATTGG+TGG | 0.521866 | 1.3:-55234018 | None:intergenic |
| ATGCAACTGTTACTGCGTCT+TGG | 0.525252 | 1.3:+55235311 | MS.gene86814:CDS |
| CCAAAAGTGTGGGAAATAGT+TGG | 0.526021 | 1.3:+55234190 | MS.gene86814:CDS |
| ACTTGTAGTAAACGTATGCC+TGG | 0.526377 | 1.3:+55233678 | MS.gene86814:CDS |
| ACTTGGACGTACTCCTCCCA+TGG | 0.536006 | 1.3:+55231588 | MS.gene86814:CDS |
| ATATTACATCCAACTAATAG+AGG | 0.536794 | 1.3:-55234789 | None:intergenic |
| ACTGCGTCTTGGTCTGACAT+AGG | 0.537068 | 1.3:+55235322 | MS.gene86814:CDS |
| ACGGAATAAGCGTTCGCGAA+AGG | 0.537756 | 1.3:+55233895 | MS.gene86814:CDS |
| TGGGAGTTTATTCAGATGCC+GGG | 0.538487 | 1.3:+55233566 | MS.gene86814:CDS |
| GAAGGAAACGTTGAAACCTT+GGG | 0.540376 | 1.3:-55233496 | None:intergenic |
| TCTTCTTCTCTATGTGTGAA+TGG | 0.540517 | 1.3:+55234058 | MS.gene86814:CDS |
| TAATTACCATTCCATCCTCC+AGG | 0.541589 | 1.3:-55234482 | None:intergenic |
| GTTGCTTATCAATTCATATG+TGG | 0.544672 | 1.3:-55234829 | None:intergenic |
| CTTATGCTGGACCTGGAGGA+TGG | 0.545149 | 1.3:+55234471 | MS.gene86814:CDS |
| TGGGCATCTTATGCTGGACC+TGG | 0.550800 | 1.3:+55234464 | MS.gene86814:CDS |
| TGCAACGTGGGCCAAAAGTG+TGG | 0.554880 | 1.3:+55234179 | MS.gene86814:CDS |
| TTAGGGGAATATGGTTCCCA+AGG | 0.555724 | 1.3:+55233480 | MS.gene86814:intron |
| TGATAATGATACCTGTATCT+CGG | 0.559350 | 1.3:-55232962 | None:intergenic |
| CTACGGTGACAGGTATGGGC+AGG | 0.562492 | 1.3:+55235235 | MS.gene86814:intron |
| TATTATTTCAGCCGACGCAA+TGG | 0.564004 | 1.3:+55233055 | MS.gene86814:intron |
| GCTCATTATATTCATAGGAA+AGG | 0.565444 | 1.3:+55233535 | MS.gene86814:CDS |
| TGGATGTAATATTCAAGCAA+TGG | 0.566327 | 1.3:+55234800 | MS.gene86814:CDS |
| AGTGAAGCTTTATTAAACTC+CGG | 0.574235 | 1.3:+55234027 | MS.gene86814:CDS |
| CTTGGACGTACTCCTCCCAT+GGG | 0.579757 | 1.3:+55231589 | MS.gene86814:CDS |
| GCCAGTTGACACCATTGCGT+CGG | 0.584197 | 1.3:-55233066 | None:intergenic |
| GGAACTTAATCGAGACTCAA+AGG | 0.593389 | 1.3:+55233265 | MS.gene86814:CDS |
| ATATAGAAGATAATTGGAAG+AGG | 0.597307 | 1.3:+55234226 | MS.gene86814:CDS |
| GCTGGACCTGGAGGATGGAA+TGG | 0.600529 | 1.3:+55234476 | MS.gene86814:CDS |
| GCAACGTGGGCCAAAAGTGT+GGG | 0.604665 | 1.3:+55234180 | MS.gene86814:CDS |
| AAGCTTTATTAAACTCCGGA+AGG | 0.609339 | 1.3:+55234031 | MS.gene86814:CDS |
| GCTAGAGCCTTGATTCCTGA+AGG | 0.622037 | 1.3:-55233514 | None:intergenic |
| ATGAGGGTAGCTTACCCCAT+GGG | 0.623626 | 1.3:-55231604 | None:intergenic |
| ATGCTTGAAGTTGGAAATGG+AGG | 0.629089 | 1.3:+55234618 | MS.gene86814:CDS |
| TCACACATAGAGAAGAAGAT+CGG | 0.630428 | 1.3:-55234054 | None:intergenic |
| GATGGGAAGATCCTGCAACG+TGG | 0.636522 | 1.3:+55234166 | MS.gene86814:CDS |
| GCATCTTATGCTGGACCTGG+AGG | 0.645529 | 1.3:+55234467 | MS.gene86814:CDS |
| ATTTGTACCCTAAAGCAGCA+AGG | 0.672262 | 1.3:-55233088 | None:intergenic |
| AGGGTAGCTTACCCCATGGG+AGG | 0.673038 | 1.3:-55231601 | None:intergenic |
| TGATGCAAGAGATTTATGGG+AGG | 0.716729 | 1.3:+55235366 | MS.gene86814:CDS |
| ATGGGCACGATATTCCTCTG+TGG | 0.732691 | 1.3:-55234646 | None:intergenic |
| AAATGGAGGCATGACCACAG+AGG | 0.748734 | 1.3:+55234632 | MS.gene86814:CDS |
| TTGGACGTACTCCTCCCATG+GGG | 0.779061 | 1.3:+55231590 | MS.gene86814:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACATTGAAATATAAAAAT+AGG | - | chr1.3:55234359-55234378 | None:intergenic | 10.0% |
| !! | AAGAAATTAAACAAATAAAT+GGG | - | chr1.3:55233327-55233346 | None:intergenic | 10.0% |
| !! | TATATAAATTGAAAATTCTA+AGG | - | chr1.3:55232572-55232591 | None:intergenic | 10.0% |
| !!! | AAATTATGTTTTTTTATTAG+TGG | - | chr1.3:55232509-55232528 | None:intergenic | 10.0% |
| !!! | AAGGTTAATTTTATTTTAAA+AGG | - | chr1.3:55232553-55232572 | None:intergenic | 10.0% |
| !!! | AATTATTCTTTATTCTTTTA+TGG | + | chr1.3:55233153-55233172 | MS.gene86814:intron | 10.0% |
| !!! | AGGTTAATTTTATTTTAAAA+GGG | - | chr1.3:55232552-55232571 | None:intergenic | 10.0% |
| !!! | ATAAAATTGGTTTTTTATTA+AGG | + | chr1.3:55232683-55232702 | MS.gene86814:intron | 10.0% |
| !!! | TAACTTTTTAAAAAAAGAAA+AGG | + | chr1.3:55232144-55232163 | MS.gene86814:intron | 10.0% |
| !!! | TATAGAAACTAAATTTTTTT+TGG | - | chr1.3:55231657-55231676 | None:intergenic | 10.0% |
| !! | AGAAATTAAACAAATAAATG+GGG | - | chr1.3:55233326-55233345 | None:intergenic | 15.0% |
| !! | CTATAATTTGAAAAATGAAT+GGG | - | chr1.3:55232376-55232395 | None:intergenic | 15.0% |
| !! | GAAGAAATTAAACAAATAAA+TGG | - | chr1.3:55233328-55233347 | None:intergenic | 15.0% |
| !! | TATATCATATATATAATCCT+AGG | + | chr1.3:55233801-55233820 | MS.gene86814:intron | 15.0% |
| !! | TATGATAATTGTGAAAATAA+CGG | + | chr1.3:55233876-55233895 | MS.gene86814:CDS | 15.0% |
| !! | TATTATAATTTAAATCTACG+TGG | + | chr1.3:55231842-55231861 | MS.gene86814:intron | 15.0% |
| !! | TCTATAATTTGAAAAATGAA+TGG | - | chr1.3:55232377-55232396 | None:intergenic | 15.0% |
| !! | TTGAAATATAAAAATAGGAA+AGG | - | chr1.3:55234354-55234373 | None:intergenic | 15.0% |
| !! | TTGAAGTATGAAAAAAAATT+AGG | - | chr1.3:55235081-55235100 | None:intergenic | 15.0% |
| !!! | AAAAAACCAATTTTATCATT+CGG | - | chr1.3:55232679-55232698 | None:intergenic | 15.0% |
| !!! | AATGTTTTAAGAAACAAAAT+CGG | + | chr1.3:55231714-55231733 | MS.gene86814:intron | 15.0% |
| !!! | ATTTTTTTTTAGATGATTGT+TGG | + | chr1.3:55233240-55233259 | MS.gene86814:intron | 15.0% |
| !!! | TAATTCTTTTCTAAAATGAA+GGG | + | chr1.3:55234143-55234162 | MS.gene86814:intron | 15.0% |
| !!! | TTAATTCTTTTCTAAAATGA+AGG | + | chr1.3:55234142-55234161 | MS.gene86814:intron | 15.0% |
| !!! | TTTTTCATGAAAATAATTTG+AGG | - | chr1.3:55232201-55232220 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTAGATGATTGTT+GGG | + | chr1.3:55233241-55233260 | MS.gene86814:intron | 15.0% |
| !! | AAAAAAAAAGCAGAGAAATA+TGG | + | chr1.3:55232333-55232352 | MS.gene86814:intron | 20.0% |
| !! | AAAGTGATTTATAATTTAGG+TGG | + | chr1.3:55232600-55232619 | MS.gene86814:intron | 20.0% |
| !! | AAGTTGTAAACATAATAGTT+CGG | - | chr1.3:55232997-55233016 | None:intergenic | 20.0% |
| !! | ATGAAAAATAGATAAGAATG+AGG | - | chr1.3:55231624-55231643 | None:intergenic | 20.0% |
| !! | CTTCGTATGTATTAAAAATT+AGG | + | chr1.3:55233992-55234011 | MS.gene86814:intron | 20.0% |
| !! | GAAATTAAACAAATAAATGG+GGG | - | chr1.3:55233325-55233344 | None:intergenic | 20.0% |
| !! | GGGTACAAATATATTAATTT+AGG | + | chr1.3:55233101-55233120 | MS.gene86814:CDS | 20.0% |
| !! | GTCAAAGTGATTTATAATTT+AGG | + | chr1.3:55232597-55232616 | MS.gene86814:intron | 20.0% |
| !! | TCATACTTCAATTAAAAAGA+TGG | + | chr1.3:55235090-55235109 | MS.gene86814:intron | 20.0% |
| !! | TGAAAAATAGATAAGAATGA+GGG | - | chr1.3:55231623-55231642 | None:intergenic | 20.0% |
| !! | TTATAGCAAAATCTAGTATT+AGG | + | chr1.3:55234554-55234573 | MS.gene86814:intron | 20.0% |
| !! | TTATATGTGTAACTGTTATT+TGG | + | chr1.3:55234580-55234599 | MS.gene86814:intron | 20.0% |
| !!! | AATTATTTTCATGAAAAACG+AGG | + | chr1.3:55232203-55232222 | MS.gene86814:intron | 20.0% |
| !!! | AATTCTTTTCTAAAATGAAG+GGG | + | chr1.3:55234144-55234163 | MS.gene86814:intron | 20.0% |
| !!! | AGAGTTTTTTACAACTTATA+AGG | + | chr1.3:55235053-55235072 | MS.gene86814:intron | 20.0% |
| !!! | ATGTTTTAAGAAACAAAATC+GGG | + | chr1.3:55231715-55231734 | MS.gene86814:intron | 20.0% |
| !!! | CTATTTGTATTGGTTTAAAT+AGG | + | chr1.3:55234764-55234783 | MS.gene86814:intron | 20.0% |
| !!! | TAAAAATCATATGCTTCTTT+TGG | + | chr1.3:55234936-55234955 | MS.gene86814:intron | 20.0% |
| !!! | TACTTTTCTTTTTTGTTGAA+AGG | + | chr1.3:55232740-55232759 | MS.gene86814:intron | 20.0% |
| !!! | TAGATTTTGCTATAAATGTA+AGG | - | chr1.3:55234549-55234568 | None:intergenic | 20.0% |
| !!! | TTTTTTATTAAGGAGAATGA+TGG | + | chr1.3:55232693-55232712 | MS.gene86814:intron | 20.0% |
| ! | AAAAGAAAAGGAAAATTGCA+TGG | + | chr1.3:55232156-55232175 | MS.gene86814:intron | 25.0% |
| ! | AATTATAGGAGCAATGATAA+TGG | + | chr1.3:55232023-55232042 | MS.gene86814:intron | 25.0% |
| ! | AGATAGTATAAGATAAGATG+TGG | + | chr1.3:55232623-55232642 | MS.gene86814:intron | 25.0% |
| ! | AGTTGTAAACATAATAGTTC+GGG | - | chr1.3:55232996-55233015 | None:intergenic | 25.0% |
| ! | ATATAGAAGATAATTGGAAG+AGG | + | chr1.3:55234226-55234245 | MS.gene86814:CDS | 25.0% |
| ! | ATATTACATCCAACTAATAG+AGG | - | chr1.3:55234792-55234811 | None:intergenic | 25.0% |
| ! | GTTAAAAGAGACATTGTAAA+AGG | - | chr1.3:55234291-55234310 | None:intergenic | 25.0% |
| ! | TAGACTTACTATCAATTCAA+TGG | - | chr1.3:55231872-55231891 | None:intergenic | 25.0% |
| ! | TATCATTGCTCCTATAATTT+AGG | - | chr1.3:55232022-55232041 | None:intergenic | 25.0% |
| ! | TCAAAATCATATCATTGACA+TGG | - | chr1.3:55233221-55233240 | None:intergenic | 25.0% |
| ! | TTAACGCATTAAATTGTACT+TGG | + | chr1.3:55233591-55233610 | MS.gene86814:intron | 25.0% |
| ! | TTATACATATGATCATCAGA+TGG | + | chr1.3:55232895-55232914 | MS.gene86814:intron | 25.0% |
| ! | TTCAATTAAAAAGATGGATC+TGG | + | chr1.3:55235096-55235115 | MS.gene86814:intron | 25.0% |
| ! | TTTAATAAAGCTTCACTCAT+TGG | - | chr1.3:55234024-55234043 | None:intergenic | 25.0% |
| ! | TTTCACATAATCAAAACCTT+AGG | - | chr1.3:55235446-55235465 | None:intergenic | 25.0% |
| ! | TTTGAGGAACAAATGTTATA+TGG | - | chr1.3:55232185-55232204 | None:intergenic | 25.0% |
| !! | ATTGAATTGATAGTAAGTCT+AGG | + | chr1.3:55231871-55231890 | MS.gene86814:intron | 25.0% |
| !! | CTCTTTTAACAACATAATTG+AGG | + | chr1.3:55234301-55234320 | MS.gene86814:intron | 25.0% |
| !! | CTTTTCCTAAAGATTTCTTT+TGG | + | chr1.3:55231972-55231991 | MS.gene86814:intron | 25.0% |
| !! | TAAATATTGGTTAACAACCT+AGG | - | chr1.3:55233821-55233840 | None:intergenic | 25.0% |
| !! | TGTCGTTTAACTATTTGTAT+TGG | + | chr1.3:55234754-55234773 | MS.gene86814:intron | 25.0% |
| !! | TTGATTTTGTCCGTTAATAT+TGG | + | chr1.3:55232059-55232078 | MS.gene86814:intron | 25.0% |
| !!! | CAACAATCATAATTTTTCAG+AGG | - | chr1.3:55233433-55233452 | None:intergenic | 25.0% |
| !!! | GTTTTTTTATTAGTGGTATG+AGG | - | chr1.3:55232502-55232521 | None:intergenic | 25.0% |
| !!! | TGCTACTTTGTTTTTACTAA+GGG | - | chr1.3:55235263-55235282 | None:intergenic | 25.0% |
| !!! | TGGAGTACTGTTTTTTTTTA+AGG | - | chr1.3:55231998-55232017 | None:intergenic | 25.0% |
| !!! | TGTTTTAACATTTTTTCGCT+TGG | - | chr1.3:55232229-55232248 | None:intergenic | 25.0% |
| !!! | TTGCAATAGTTTCCATTTTT+TGG | - | chr1.3:55235127-55235146 | None:intergenic | 25.0% |
| AAATAGGAAAGGAATTCTTG+AGG | - | chr1.3:55234343-55234362 | None:intergenic | 30.0% | |
| AAGTATATATCTCCTCACTA+TGG | - | chr1.3:55232725-55232744 | None:intergenic | 30.0% | |
| ACAATGATATTAGGGGAATA+TGG | + | chr1.3:55233471-55233490 | MS.gene86814:intron | 30.0% | |
| ACTCTAACTCAAACAGAATA+AGG | - | chr1.3:55235038-55235057 | None:intergenic | 30.0% | |
| AGATGTTCACAAAAGCAAAA+TGG | - | chr1.3:55232653-55232672 | None:intergenic | 30.0% | |
| AGTACTCCATCCTAAATTAT+AGG | + | chr1.3:55232009-55232028 | MS.gene86814:intron | 30.0% | |
| ATATCATTGACATGGTAATC+TGG | - | chr1.3:55233213-55233232 | None:intergenic | 30.0% | |
| ATTGCTCCTATAATTTAGGA+TGG | - | chr1.3:55232018-55232037 | None:intergenic | 30.0% | |
| CAATTTAATGCGTTAATACC+CGG | - | chr1.3:55233587-55233606 | None:intergenic | 30.0% | |
| CACAACTTAATAGAAAGCTA+CGG | + | chr1.3:55235218-55235237 | MS.gene86814:intron | 30.0% | |
| CATTGATATCACAACCAAAA+TGG | - | chr1.3:55232932-55232951 | None:intergenic | 30.0% | |
| GAAAAGCAACAATGATTTAG+AGG | + | chr1.3:55234995-55235014 | MS.gene86814:CDS | 30.0% | |
| GAAGTTATTGCAGTAAATCA+AGG | + | chr1.3:55234855-55234874 | MS.gene86814:CDS | 30.0% | |
| GATGTTCACAAAAGCAAAAT+GGG | - | chr1.3:55232652-55232671 | None:intergenic | 30.0% | |
| GCATGTATATAGTACAGAAA+TGG | - | chr1.3:55235164-55235183 | None:intergenic | 30.0% | |
| GCTCATTATATTCATAGGAA+AGG | + | chr1.3:55233535-55233554 | MS.gene86814:CDS | 30.0% | |
| GGTTTGTGACAATGATATTA+GGG | + | chr1.3:55233463-55233482 | MS.gene86814:intron | 30.0% | |
| GTCTCAAATTTGATTCTTCT+CGG | + | chr1.3:55232099-55232118 | MS.gene86814:intron | 30.0% | |
| GTGTGAAAGAAAAAGAAAGA+TGG | - | chr1.3:55232437-55232456 | None:intergenic | 30.0% | |
| GTTGCTTATCAATTCATATG+TGG | - | chr1.3:55234832-55234851 | None:intergenic | 30.0% | |
| GTTGTAAACATAATAGTTCG+GGG | - | chr1.3:55232995-55233014 | None:intergenic | 30.0% | |
| GTTTGTGACAATGATATTAG+GGG | + | chr1.3:55233464-55233483 | MS.gene86814:intron | 30.0% | |
| TAAGGCCAAAAGAAATCTTT+AGG | - | chr1.3:55231980-55231999 | None:intergenic | 30.0% | |
| TAGTAAAAACAAAGTAGCAG+TGG | + | chr1.3:55235264-55235283 | MS.gene86814:CDS | 30.0% | |
| TAGTACGTAATTTATGTGCA+AGG | + | chr1.3:55231750-55231769 | MS.gene86814:intron | 30.0% | |
| TATAGATGCAAACGACAAAT+GGG | + | chr1.3:55234445-55234464 | MS.gene86814:CDS | 30.0% | |
| TCTTGACCGAATGATAAAAT+TGG | + | chr1.3:55232670-55232689 | MS.gene86814:intron | 30.0% | |
| TGGATGTAATATTCAAGCAA+TGG | + | chr1.3:55234800-55234819 | MS.gene86814:CDS | 30.0% | |
| TTAAGAAACAAAATCGGGTA+TGG | + | chr1.3:55231720-55231739 | MS.gene86814:intron | 30.0% | |
| TTATAGATGCAAACGACAAA+TGG | + | chr1.3:55234444-55234463 | MS.gene86814:CDS | 30.0% | |
| ! | AGTTGATGCAAGAGATTTAT+GGG | + | chr1.3:55235363-55235382 | MS.gene86814:CDS | 30.0% |
| ! | CAAAGTCATTTAAGTTCCTA+AGG | + | chr1.3:55235427-55235446 | MS.gene86814:intron | 30.0% |
| ! | CTATACCTTTTAAACAACGA+AGG | - | chr1.3:55233364-55233383 | None:intergenic | 30.0% |
| ! | CTCTAGCTCATTATATTCAT+AGG | + | chr1.3:55233530-55233549 | MS.gene86814:CDS | 30.0% |
| ! | CTTCGTTGTTTAAAAGGTAT+AGG | + | chr1.3:55233362-55233381 | MS.gene86814:intron | 30.0% |
| ! | CTTTTCCTTCGTTGTTTAAA+AGG | + | chr1.3:55233356-55233375 | MS.gene86814:intron | 30.0% |
| ! | TAGTTGATGCAAGAGATTTA+TGG | + | chr1.3:55235362-55235381 | MS.gene86814:CDS | 30.0% |
| ! | TATATGTTGCAAAATGGACT+TGG | + | chr1.3:55231571-55231590 | MS.gene86814:CDS | 30.0% |
| ! | TATTAACGGACAAAATCAAG+TGG | - | chr1.3:55232058-55232077 | None:intergenic | 30.0% |
| ! | TGATAATGATACCTGTATCT+CGG | - | chr1.3:55232965-55232984 | None:intergenic | 30.0% |
| ! | TGGTTTGTGACAATGATATT+AGG | + | chr1.3:55233462-55233481 | MS.gene86814:intron | 30.0% |
| !! | AGTGAAGCTTTATTAAACTC+CGG | + | chr1.3:55234027-55234046 | MS.gene86814:CDS | 30.0% |
| !! | CGCGAAAGGTATTTAATATA+TGG | + | chr1.3:55233909-55233928 | MS.gene86814:intron | 30.0% |
| !!! | CTACTTTGTTTTTACTAAGG+GGG | - | chr1.3:55235261-55235280 | None:intergenic | 30.0% |
| !!! | CTGCTACTTTGTTTTTACTA+AGG | - | chr1.3:55235264-55235283 | None:intergenic | 30.0% |
| !!! | GAAAAGTATTTTGCCACATT+AGG | - | chr1.3:55231958-55231977 | None:intergenic | 30.0% |
| !!! | GCTACTTTGTTTTTACTAAG+GGG | - | chr1.3:55235262-55235281 | None:intergenic | 30.0% |
| !!! | TTTTCTAAAATGAAGGGGAT+GGG | + | chr1.3:55234149-55234168 | MS.gene86814:intron | 30.0% |
| !!! | TTTTTTAGATGATTGTTGGG+CGG | + | chr1.3:55233244-55233263 | MS.gene86814:intron | 30.0% |
| AAAAATGTATCCCGACCATA+TGG | + | chr1.3:55232253-55232272 | MS.gene86814:intron | 35.0% | |
| AAAGCCACCATATTTCCATA+TGG | - | chr1.3:55232271-55232290 | None:intergenic | 35.0% | |
| AAATAGGCTCCTCTATTAGT+TGG | + | chr1.3:55234780-55234799 | MS.gene86814:intron | 35.0% | |
| AATAAAGCTTCACTCATTGG+TGG | - | chr1.3:55234021-55234040 | None:intergenic | 35.0% | |
| ATCATTGTCACAAACCAATC+AGG | - | chr1.3:55233459-55233478 | None:intergenic | 35.0% | |
| ATGCCAAAACATTTGCTTCT+TGG | + | chr1.3:55233724-55233743 | MS.gene86814:CDS | 35.0% | |
| CAGGCGATATAGAAGATAAT+TGG | + | chr1.3:55234220-55234239 | MS.gene86814:CDS | 35.0% | |
| CATACGAAGCATGTAAGTAT+TGG | - | chr1.3:55233981-55234000 | None:intergenic | 35.0% | |
| CTATAATAGAAGTCATGCTG+AGG | - | chr1.3:55234430-55234449 | None:intergenic | 35.0% | |
| CTTGCATCAACTATAGTTTC+TGG | - | chr1.3:55235355-55235374 | None:intergenic | 35.0% | |
| GAAAGTTTAATCCGAGATAC+AGG | + | chr1.3:55232951-55232970 | MS.gene86814:CDS | 35.0% | |
| TAATGCCCAAATGCTGAAAT+GGG | - | chr1.3:55234667-55234686 | None:intergenic | 35.0% | |
| TATAGTACTCCATCCTAATG+TGG | + | chr1.3:55231942-55231961 | MS.gene86814:intron | 35.0% | |
| TATGATTGTTGACACCTGAT+TGG | + | chr1.3:55233442-55233461 | MS.gene86814:intron | 35.0% | |
| TCACACATAGAGAAGAAGAT+CGG | - | chr1.3:55234057-55234076 | None:intergenic | 35.0% | |
| TCTTCTTCTCTATGTGTGAA+TGG | + | chr1.3:55234058-55234077 | MS.gene86814:CDS | 35.0% | |
| TGATGGAATTATCCATAGTG+AGG | + | chr1.3:55232710-55232729 | MS.gene86814:intron | 35.0% | |
| TGCCAAAACATTTGCTTCTT+GGG | + | chr1.3:55233725-55233744 | MS.gene86814:CDS | 35.0% | |
| TGTATGTTCTGACACCAAAA+AGG | + | chr1.3:55235542-55235561 | MS.gene86814:CDS | 35.0% | |
| TTTGGTCATGCAGATAAACT+TGG | + | chr1.3:55234954-55234973 | MS.gene86814:intron | 35.0% | |
| ! | AGTATTTTGCCACATTAGGA+TGG | - | chr1.3:55231954-55231973 | None:intergenic | 35.0% |
| ! | ATGGTGAGTTGAATTGATCA+TGG | + | chr1.3:55234077-55234096 | MS.gene86814:intron | 35.0% |
| ! | GATCTGGAACAACCAAAAAA+TGG | + | chr1.3:55235112-55235131 | MS.gene86814:intron | 35.0% |
| ! | TACCCAAGAAGCAAATGTTT+TGG | - | chr1.3:55233730-55233749 | None:intergenic | 35.0% |
| ! | TTTGTCCGTTAATATTGGCT+TGG | + | chr1.3:55232064-55232083 | MS.gene86814:intron | 35.0% |
| !! | AAGCTTTATTAAACTCCGGA+AGG | + | chr1.3:55234031-55234050 | MS.gene86814:CDS | 35.0% |
| !! | CAACTATAGTTTCTGGTTCA+AGG | - | chr1.3:55235348-55235367 | None:intergenic | 35.0% |
| !! | CTCAACACAATCATTGGTTT+CGG | + | chr1.3:55235480-55235499 | MS.gene86814:CDS | 35.0% |
| !! | TCAACACAATCATTGGTTTC+GGG | + | chr1.3:55235481-55235500 | MS.gene86814:CDS | 35.0% |
| !! | TTGTCCGTTAATATTGGCTT+GGG | + | chr1.3:55232065-55232084 | MS.gene86814:intron | 35.0% |
| !!! | CTTTTCTAAAATGAAGGGGA+TGG | + | chr1.3:55234148-55234167 | MS.gene86814:intron | 35.0% |
| AAACGTATGCCTGGATCATT+GGG | + | chr1.3:55233687-55233706 | MS.gene86814:CDS | 40.0% | |
| AACGTTTCCTTCAGGAATCA+AGG | + | chr1.3:55233507-55233526 | MS.gene86814:CDS | 40.0% | |
| AAGGTTTCAACGTTTCCTTC+AGG | + | chr1.3:55233499-55233518 | MS.gene86814:CDS | 40.0% | |
| ACTTGTAGTAAACGTATGCC+TGG | + | chr1.3:55233678-55233697 | MS.gene86814:CDS | 40.0% | |
| ATCCCGACCATATGGAAATA+TGG | + | chr1.3:55232261-55232280 | MS.gene86814:intron | 40.0% | |
| ATGCTTGAAGTTGGAAATGG+AGG | + | chr1.3:55234618-55234637 | MS.gene86814:CDS | 40.0% | |
| ATTTCATGTCCCAATGATCC+AGG | - | chr1.3:55233699-55233718 | None:intergenic | 40.0% | |
| ATTTGTACCCTAAAGCAGCA+AGG | - | chr1.3:55233091-55233110 | None:intergenic | 40.0% | |
| CACCATATTTCCATATGGTC+GGG | - | chr1.3:55232266-55232285 | None:intergenic | 40.0% | |
| CATAGGAAAGGCTTGAAGTT+GGG | + | chr1.3:55233547-55233566 | MS.gene86814:CDS | 40.0% | |
| CCACCATATTTCCATATGGT+CGG | - | chr1.3:55232267-55232286 | None:intergenic | 40.0% | |
| CTAATGCCCAAATGCTGAAA+TGG | - | chr1.3:55234668-55234687 | None:intergenic | 40.0% | |
| GAAGGAAACGTTGAAACCTT+GGG | - | chr1.3:55233499-55233518 | None:intergenic | 40.0% | |
| GACATGCTTGAAGTTGGAAA+TGG | + | chr1.3:55234615-55234634 | MS.gene86814:CDS | 40.0% | |
| GCAGATAAACTTGGAGTTCA+AGG | + | chr1.3:55234963-55234982 | MS.gene86814:intron | 40.0% | |
| GGAAATAGTTGGAGAACAAC+AGG | + | chr1.3:55234201-55234220 | MS.gene86814:CDS | 40.0% | |
| GGAACTTAATCGAGACTCAA+AGG | + | chr1.3:55233265-55233284 | MS.gene86814:CDS | 40.0% | |
| GTAGCACTCAACACAATCAT+TGG | + | chr1.3:55235474-55235493 | MS.gene86814:intron | 40.0% | |
| GTCTCCCAAGCCAATATTAA+CGG | - | chr1.3:55232072-55232091 | None:intergenic | 40.0% | |
| TAAACGTATGCCTGGATCAT+TGG | + | chr1.3:55233686-55233705 | MS.gene86814:CDS | 40.0% | |
| TAAATAAGTGACCGTTCTCG+TGG | + | chr1.3:55231894-55231913 | MS.gene86814:intron | 40.0% | |
| TAATAGAAAGCTACGGTGAC+AGG | + | chr1.3:55235225-55235244 | MS.gene86814:intron | 40.0% | |
| TAATTACCATTCCATCCTCC+AGG | - | chr1.3:55234485-55234504 | None:intergenic | 40.0% | |
| TATTATTTCAGCCGACGCAA+TGG | + | chr1.3:55233055-55233074 | MS.gene86814:intron | 40.0% | |
| TCATAGGAAAGGCTTGAAGT+TGG | + | chr1.3:55233546-55233565 | MS.gene86814:CDS | 40.0% | |
| TGAAGGAAACGTTGAAACCT+TGG | - | chr1.3:55233500-55233519 | None:intergenic | 40.0% | |
| TGATCATCAGATGGAATAGC+TGG | + | chr1.3:55232904-55232923 | MS.gene86814:intron | 40.0% | |
| TGATGCAAGAGATTTATGGG+AGG | + | chr1.3:55235366-55235385 | MS.gene86814:CDS | 40.0% | |
| TGCACGTACACATTATGCTA+TGG | + | chr1.3:55235187-55235206 | MS.gene86814:intron | 40.0% | |
| TTGGGAGTTTATTCAGATGC+CGG | + | chr1.3:55233565-55233584 | MS.gene86814:CDS | 40.0% | |
| TTTCCAACTTCAAGCATGTC+AGG | - | chr1.3:55234615-55234634 | None:intergenic | 40.0% | |
| ! | ACAAAGTAGCAGTGGTCTTA+TGG | + | chr1.3:55235272-55235291 | MS.gene86814:CDS | 40.0% |
| ! | CCAAAAGTGTGGGAAATAGT+TGG | + | chr1.3:55234190-55234209 | MS.gene86814:CDS | 40.0% |
| ! | CCAACTATTTCCCACACTTT+TGG | - | chr1.3:55234193-55234212 | None:intergenic | 40.0% |
| ! | TGGAATAGCTGGAACCATTT+TGG | + | chr1.3:55232915-55232934 | MS.gene86814:CDS | 40.0% |
| AAAGCTACGGTGACAGGTAT+GGG | + | chr1.3:55235231-55235250 | MS.gene86814:intron | 45.0% | |
| ATCGTGCCCATTTCAGCATT+TGG | + | chr1.3:55234658-55234677 | MS.gene86814:CDS | 45.0% | |
| ATGCAACTGTTACTGCGTCT+TGG | + | chr1.3:55235311-55235330 | MS.gene86814:CDS | 45.0% | |
| CAGCATTTGGGCATTAGCTA+AGG | + | chr1.3:55234671-55234690 | MS.gene86814:CDS | 45.0% | |
| CCGACCATATGGAAATATGG+TGG | + | chr1.3:55232264-55232283 | MS.gene86814:intron | 45.0% | |
| GACAAATGGGCATCTTATGC+TGG | + | chr1.3:55234458-55234477 | MS.gene86814:CDS | 45.0% | |
| GATCCTGACATGCTTGAAGT+TGG | + | chr1.3:55234609-55234628 | MS.gene86814:intron | 45.0% | |
| TCGTGCCCATTTCAGCATTT+GGG | + | chr1.3:55234659-55234678 | MS.gene86814:CDS | 45.0% | |
| TGGGAGTTTATTCAGATGCC+GGG | + | chr1.3:55233566-55233585 | MS.gene86814:CDS | 45.0% | |
| TTAGGGGAATATGGTTCCCA+AGG | + | chr1.3:55233480-55233499 | MS.gene86814:intron | 45.0% | |
| !! | AGAAAAATTTAAATAAATAT+TGG | - | chr1.3:55233834-55233853 | None:intergenic | 5.0% |
| !!! | ATTTATTTAAATTTTTCTTT+AGG | + | chr1.3:55233836-55233855 | MS.gene86814:intron | 5.0% |
| !!! | TTTATTTAAATTTTTCTTTA+GGG | + | chr1.3:55233837-55233856 | MS.gene86814:intron | 5.0% |
| AATGAGGGTAGCTTACCCCA+TGG | - | chr1.3:55231608-55231627 | None:intergenic | 50.0% | |
| ACGGAATAAGCGTTCGCGAA+AGG | + | chr1.3:55233895-55233914 | MS.gene86814:CDS | 50.0% | |
| ACTGCGTCTTGGTCTGACAT+AGG | + | chr1.3:55235322-55235341 | MS.gene86814:CDS | 50.0% | |
| AGAGAAGAAGATCGGCCTTC+CGG | - | chr1.3:55234049-55234068 | None:intergenic | 50.0% | |
| ATGAGGGTAGCTTACCCCAT+GGG | - | chr1.3:55231607-55231626 | None:intergenic | 50.0% | |
| ATGGGAAGATCCTGCAACGT+GGG | + | chr1.3:55234167-55234186 | MS.gene86814:CDS | 50.0% | |
| ATGGGCACGATATTCCTCTG+TGG | - | chr1.3:55234649-55234668 | None:intergenic | 50.0% | |
| GAAAGCTACGGTGACAGGTA+TGG | + | chr1.3:55235230-55235249 | MS.gene86814:intron | 50.0% | |
| GCTAGAGCCTTGATTCCTGA+AGG | - | chr1.3:55233517-55233536 | None:intergenic | 50.0% | |
| ! | AAATGGAGGCATGACCACAG+AGG | + | chr1.3:55234632-55234651 | MS.gene86814:CDS | 50.0% |
| !! | CAACTGGCCTTGCTGCTTTA+GGG | + | chr1.3:55233081-55233100 | MS.gene86814:CDS | 50.0% |
| !! | TCAACTGGCCTTGCTGCTTT+AGG | + | chr1.3:55233080-55233099 | MS.gene86814:CDS | 50.0% |
| ACTTGGACGTACTCCTCCCA+TGG | + | chr1.3:55231588-55231607 | MS.gene86814:CDS | 55.0% | |
| CTTATGCTGGACCTGGAGGA+TGG | + | chr1.3:55234471-55234490 | MS.gene86814:CDS | 55.0% | |
| CTTGGACGTACTCCTCCCAT+GGG | + | chr1.3:55231589-55231608 | MS.gene86814:CDS | 55.0% | |
| GATGGGAAGATCCTGCAACG+TGG | + | chr1.3:55234166-55234185 | MS.gene86814:CDS | 55.0% | |
| GCATCTTATGCTGGACCTGG+AGG | + | chr1.3:55234467-55234486 | MS.gene86814:CDS | 55.0% | |
| GCCAGTTGACACCATTGCGT+CGG | - | chr1.3:55233069-55233088 | None:intergenic | 55.0% | |
| GGCTGACTGAGGGTGGAATT+TGG | + | chr1.3:55231915-55231934 | MS.gene86814:intron | 55.0% | |
| TGCAACGTGGGCCAAAAGTG+TGG | + | chr1.3:55234179-55234198 | MS.gene86814:CDS | 55.0% | |
| TGGGCATCTTATGCTGGACC+TGG | + | chr1.3:55234464-55234483 | MS.gene86814:CDS | 55.0% | |
| TTGGACGTACTCCTCCCATG+GGG | + | chr1.3:55231590-55231609 | MS.gene86814:CDS | 55.0% | |
| ! | ACACTTTTGGCCCACGTTGC+AGG | - | chr1.3:55234180-55234199 | None:intergenic | 55.0% |
| ! | GCAACGTGGGCCAAAAGTGT+GGG | + | chr1.3:55234180-55234199 | MS.gene86814:CDS | 55.0% |
| ACCGTTCTCGTGGCTGACTG+AGG | + | chr1.3:55231904-55231923 | MS.gene86814:intron | 60.0% | |
| AGGGTAGCTTACCCCATGGG+AGG | - | chr1.3:55231604-55231623 | None:intergenic | 60.0% | |
| CCCTCAGTCAGCCACGAGAA+CGG | - | chr1.3:55231908-55231927 | None:intergenic | 60.0% | |
| CCGTTCTCGTGGCTGACTGA+GGG | + | chr1.3:55231905-55231924 | MS.gene86814:intron | 60.0% | |
| CTACGGTGACAGGTATGGGC+AGG | + | chr1.3:55235235-55235254 | MS.gene86814:intron | 60.0% | |
| GCTGGACCTGGAGGATGGAA+TGG | + | chr1.3:55234476-55234495 | MS.gene86814:CDS | 60.0% | |
| TTCTCGTGGCTGACTGAGGG+TGG | + | chr1.3:55231908-55231927 | MS.gene86814:intron | 60.0% | |
| ! | GCCGACGCAATGGTGTCAAC+TGG | + | chr1.3:55233065-55233084 | MS.gene86814:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 55231568 | 55235570 | 55231568 | ID=MS.gene86814 |
| chr1.3 | mRNA | 55231568 | 55235570 | 55231568 | ID=MS.gene86814.t1;Parent=MS.gene86814 |
| chr1.3 | exon | 55231568 | 55231611 | 55231568 | ID=MS.gene86814.t1.exon1;Parent=MS.gene86814.t1 |
| chr1.3 | CDS | 55231568 | 55231611 | 55231568 | ID=cds.MS.gene86814.t1;Parent=MS.gene86814.t1 |
| chr1.3 | exon | 55232914 | 55232972 | 55232914 | ID=MS.gene86814.t1.exon2;Parent=MS.gene86814.t1 |
| chr1.3 | CDS | 55232914 | 55232972 | 55232914 | ID=cds.MS.gene86814.t1;Parent=MS.gene86814.t1 |
| chr1.3 | exon | 55233066 | 55233122 | 55233066 | ID=MS.gene86814.t1.exon3;Parent=MS.gene86814.t1 |
| chr1.3 | CDS | 55233066 | 55233122 | 55233066 | ID=cds.MS.gene86814.t1;Parent=MS.gene86814.t1 |
| chr1.3 | exon | 55233252 | 55233286 | 55233252 | ID=MS.gene86814.t1.exon4;Parent=MS.gene86814.t1 |
| chr1.3 | CDS | 55233252 | 55233286 | 55233252 | ID=cds.MS.gene86814.t1;Parent=MS.gene86814.t1 |
| chr1.3 | exon | 55233484 | 55233587 | 55233484 | ID=MS.gene86814.t1.exon5;Parent=MS.gene86814.t1 |
| chr1.3 | CDS | 55233484 | 55233587 | 55233484 | ID=cds.MS.gene86814.t1;Parent=MS.gene86814.t1 |
| chr1.3 | exon | 55233671 | 55233746 | 55233671 | ID=MS.gene86814.t1.exon6;Parent=MS.gene86814.t1 |
| chr1.3 | CDS | 55233671 | 55233746 | 55233671 | ID=cds.MS.gene86814.t1;Parent=MS.gene86814.t1 |
| chr1.3 | exon | 55233858 | 55233916 | 55233858 | ID=MS.gene86814.t1.exon7;Parent=MS.gene86814.t1 |
| chr1.3 | CDS | 55233858 | 55233916 | 55233858 | ID=cds.MS.gene86814.t1;Parent=MS.gene86814.t1 |
| chr1.3 | exon | 55234014 | 55234079 | 55234014 | ID=MS.gene86814.t1.exon8;Parent=MS.gene86814.t1 |
| chr1.3 | CDS | 55234014 | 55234079 | 55234014 | ID=cds.MS.gene86814.t1;Parent=MS.gene86814.t1 |
| chr1.3 | exon | 55234164 | 55234247 | 55234164 | ID=MS.gene86814.t1.exon9;Parent=MS.gene86814.t1 |
| chr1.3 | CDS | 55234164 | 55234247 | 55234164 | ID=cds.MS.gene86814.t1;Parent=MS.gene86814.t1 |
| chr1.3 | exon | 55234433 | 55234497 | 55234433 | ID=MS.gene86814.t1.exon10;Parent=MS.gene86814.t1 |
| chr1.3 | CDS | 55234433 | 55234497 | 55234433 | ID=cds.MS.gene86814.t1;Parent=MS.gene86814.t1 |
| chr1.3 | exon | 55234610 | 55234692 | 55234610 | ID=MS.gene86814.t1.exon11;Parent=MS.gene86814.t1 |
| chr1.3 | CDS | 55234610 | 55234692 | 55234610 | ID=cds.MS.gene86814.t1;Parent=MS.gene86814.t1 |
| chr1.3 | exon | 55234786 | 55234876 | 55234786 | ID=MS.gene86814.t1.exon12;Parent=MS.gene86814.t1 |
| chr1.3 | CDS | 55234786 | 55234876 | 55234786 | ID=cds.MS.gene86814.t1;Parent=MS.gene86814.t1 |
| chr1.3 | exon | 55234967 | 55235016 | 55234967 | ID=MS.gene86814.t1.exon13;Parent=MS.gene86814.t1 |
| chr1.3 | CDS | 55234967 | 55235016 | 55234967 | ID=cds.MS.gene86814.t1;Parent=MS.gene86814.t1 |
| chr1.3 | exon | 55235247 | 55235387 | 55235247 | ID=MS.gene86814.t1.exon14;Parent=MS.gene86814.t1 |
| chr1.3 | CDS | 55235247 | 55235387 | 55235247 | ID=cds.MS.gene86814.t1;Parent=MS.gene86814.t1 |
| chr1.3 | exon | 55235478 | 55235570 | 55235478 | ID=MS.gene86814.t1.exon15;Parent=MS.gene86814.t1 |
| chr1.3 | CDS | 55235478 | 55235570 | 55235478 | ID=cds.MS.gene86814.t1;Parent=MS.gene86814.t1 |
| Gene Sequence |
| Protein sequence |
