Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87921.t1 | XP_013451544.1 | 99.3 | 151 | 1 | 0 | 1 | 151 | 1 | 151 | 3.70E-80 | 307.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87921.t1 | Q6ID70 | 70.9 | 151 | 43 | 1 | 1 | 151 | 1 | 150 | 1.9e-56 | 219.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87921.t1 | A0A072U7B7 | 99.3 | 151 | 1 | 0 | 1 | 151 | 1 | 151 | 2.7e-80 | 307.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049825 | MS.gene87921 | 0.802071 | 6.67E-49 | -1.69E-46 |
| MS.gene049850 | MS.gene87921 | 0.809208 | 2.12E-50 | -1.69E-46 |
| MS.gene049873 | MS.gene87921 | 0.81663 | 5.01E-52 | -1.69E-46 |
| MS.gene050355 | MS.gene87921 | 0.802982 | 4.33E-49 | -1.69E-46 |
| MS.gene050844 | MS.gene87921 | 0.807135 | 5.86E-50 | -1.69E-46 |
| MS.gene051247 | MS.gene87921 | 0.810915 | 9.09E-51 | -1.69E-46 |
| MS.gene051594 | MS.gene87921 | 0.826217 | 3.06E-54 | -1.69E-46 |
| MS.gene051719 | MS.gene87921 | 0.811303 | 7.49E-51 | -1.69E-46 |
| MS.gene051744 | MS.gene87921 | 0.811702 | 6.13E-51 | -1.69E-46 |
| MS.gene051812 | MS.gene87921 | 0.801084 | 1.06E-48 | -1.69E-46 |
| MS.gene051957 | MS.gene87921 | 0.821091 | 4.85E-53 | -1.69E-46 |
| MS.gene052208 | MS.gene87921 | 0.801697 | 7.97E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene87921 | 0.836051 | 1.17E-56 | -1.69E-46 |
| MS.gene052773 | MS.gene87921 | 0.800139 | 1.66E-48 | -1.69E-46 |
| MS.gene053226 | MS.gene87921 | 0.841243 | 5.35E-58 | -1.69E-46 |
| MS.gene053883 | MS.gene87921 | 0.840226 | 9.88E-58 | -1.69E-46 |
| MS.gene053900 | MS.gene87921 | 0.817512 | 3.17E-52 | -1.69E-46 |
| MS.gene055466 | MS.gene87921 | 0.817226 | 3.68E-52 | -1.69E-46 |
| MS.gene055778 | MS.gene87921 | 0.839769 | 1.30E-57 | -1.69E-46 |
| MS.gene055808 | MS.gene87921 | 0.815114 | 1.09E-51 | -1.69E-46 |
| MS.gene055818 | MS.gene87921 | 0.819773 | 9.74E-53 | -1.69E-46 |
| MS.gene056366 | MS.gene87921 | 0.809406 | 1.92E-50 | -1.69E-46 |
| MS.gene056498 | MS.gene87921 | 0.816284 | 5.99E-52 | -1.69E-46 |
| MS.gene057060 | MS.gene87921 | 0.819587 | 1.07E-52 | -1.69E-46 |
| MS.gene057693 | MS.gene87921 | 0.806022 | 1.01E-49 | -1.69E-46 |
| MS.gene058037 | MS.gene87921 | 0.83053 | 2.79E-55 | -1.69E-46 |
| MS.gene058625 | MS.gene87921 | 0.806802 | 6.89E-50 | -1.69E-46 |
| MS.gene059015 | MS.gene87921 | 0.805456 | 1.32E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene87921 | 0.838048 | 3.62E-57 | -1.69E-46 |
| MS.gene059625 | MS.gene87921 | 0.80738 | 5.20E-50 | -1.69E-46 |
| MS.gene060429 | MS.gene87921 | 0.821713 | 3.49E-53 | -1.69E-46 |
| MS.gene060521 | MS.gene87921 | 0.817578 | 3.07E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87921.t1 | MTR_6g027770 | 99.338 | 151 | 1 | 0 | 1 | 151 | 1 | 151 | 6.95e-110 | 308 |
| MS.gene87921.t1 | MTR_1g088700 | 50.435 | 115 | 56 | 1 | 1 | 114 | 1 | 115 | 5.17e-38 | 128 |
| MS.gene87921.t1 | MTR_7g108860 | 50.000 | 108 | 53 | 1 | 1 | 107 | 1 | 108 | 3.27e-33 | 116 |
| MS.gene87921.t1 | MTR_7g108860 | 50.000 | 108 | 53 | 1 | 1 | 107 | 1 | 108 | 6.10e-33 | 116 |
| MS.gene87921.t1 | MTR_8g058597 | 50.000 | 108 | 53 | 1 | 1 | 107 | 1 | 108 | 6.10e-33 | 116 |
| MS.gene87921.t1 | MTR_7g108860 | 50.000 | 108 | 53 | 1 | 1 | 107 | 1 | 108 | 6.71e-33 | 115 |
| MS.gene87921.t1 | MTR_6g034550 | 46.032 | 126 | 65 | 2 | 1 | 123 | 1 | 126 | 5.70e-32 | 112 |
| MS.gene87921.t1 | MTR_7g108860 | 49.057 | 106 | 53 | 1 | 3 | 107 | 11 | 116 | 3.23e-31 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87921.t1 | AT3G03773 | 72.185 | 151 | 41 | 1 | 1 | 151 | 1 | 150 | 1.71e-75 | 222 |
| MS.gene87921.t1 | AT3G03773 | 71.523 | 151 | 42 | 1 | 1 | 151 | 55 | 204 | 4.92e-74 | 220 |
| MS.gene87921.t1 | AT3G03773 | 75.221 | 113 | 27 | 1 | 1 | 113 | 1 | 112 | 4.25e-57 | 174 |
| MS.gene87921.t1 | AT4G02450 | 44.737 | 114 | 61 | 2 | 1 | 113 | 1 | 113 | 1.53e-29 | 108 |
| MS.gene87921.t1 | AT4G02450 | 44.737 | 114 | 61 | 2 | 1 | 113 | 1 | 113 | 1.57e-29 | 108 |
Find 41 sgRNAs with CRISPR-Local
Find 353 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTTACCTTCTCTGCTTCT+AGG | 0.161269 | 6.1:+10343746 | MS.gene87921:CDS |
| CGCTGTGCCCAGAGAACTTC+TGG | 0.233437 | 6.1:-10343649 | None:intergenic |
| ATTTATTCCAATCAACTTTC+AGG | 0.279329 | 6.1:-10344360 | None:intergenic |
| AGCTTTAGCTTGGAACTTTA+CGG | 0.318131 | 6.1:+10343787 | MS.gene87921:CDS |
| TGAAAGTTGATTGGAATAAA+TGG | 0.325851 | 6.1:+10344362 | MS.gene87921:CDS |
| TAGGGTTGTAAAACTAAAAC+TGG | 0.339082 | 6.1:+10344250 | MS.gene87921:intron |
| GTTCTCTGGGCACAGCGTTC+TGG | 0.347028 | 6.1:+10343655 | MS.gene87921:CDS |
| TTCTGTGAAGTGTGAGCCTC+AGG | 0.376022 | 6.1:+10343720 | MS.gene87921:CDS |
| GTCGCCATCCAGAAGTTCTC+TGG | 0.391191 | 6.1:+10343641 | MS.gene87921:intron |
| CGTCCATCATCGTCGGATAT+CGG | 0.410881 | 6.1:-10347070 | None:intergenic |
| CACCATACCTGAAAGTTGAT+TGG | 0.430676 | 6.1:+10344353 | MS.gene87921:CDS |
| AAGTTCCAAGCTAAAGCTAT+AGG | 0.431266 | 6.1:-10343782 | None:intergenic |
| CTGGGCACAGCGTTCTGGTA+AGG | 0.451788 | 6.1:+10343660 | MS.gene87921:CDS |
| TTCCAATCAACTTTCAGGTA+TGG | 0.454166 | 6.1:-10344355 | None:intergenic |
| GACAAAGAGGTTGGTGGAAA+AGG | 0.458246 | 6.1:+10344305 | MS.gene87921:CDS |
| TCTTGCAGATCTCCCTGACT+TGG | 0.470280 | 6.1:+10348062 | MS.gene87921:intron |
| GTTTACCTTCTCTGCTTCTA+GGG | 0.475165 | 6.1:+10343747 | MS.gene87921:CDS |
| ACAGAAACATCCTTGGCATC+AGG | 0.484531 | 6.1:-10343703 | None:intergenic |
| GAACCGATATCCGACGATGA+TGG | 0.491818 | 6.1:+10347067 | MS.gene87921:CDS |
| TGAATCCTATAGCTTTAGCT+TGG | 0.502986 | 6.1:+10343777 | MS.gene87921:CDS |
| TCAACTTTCAGGTATGGTGC+AGG | 0.517519 | 6.1:-10344349 | None:intergenic |
| AGATCTCCCTGACTTGGAAA+AGG | 0.525126 | 6.1:+10348068 | MS.gene87921:intron |
| CCCTGACTTGGAAAAGGCTA+GGG | 0.528158 | 6.1:+10348074 | MS.gene87921:CDS |
| TCCCTGACTTGGAAAAGGCT+AGG | 0.531404 | 6.1:+10348073 | MS.gene87921:CDS |
| CATCAGGTAGAGCAATAGTC+AGG | 0.541944 | 6.1:-10343687 | None:intergenic |
| GATGAAAGCAGTGACGATGA+AGG | 0.545274 | 6.1:+10347210 | MS.gene87921:CDS |
| ACACTTCACAGAAACATCCT+TGG | 0.552534 | 6.1:-10343710 | None:intergenic |
| TTCAGAAAGGACAAAGAGGT+TGG | 0.555066 | 6.1:+10344296 | MS.gene87921:CDS |
| AGAAAGGACAAAGAGGTTGG+TGG | 0.573743 | 6.1:+10344299 | MS.gene87921:CDS |
| TCGCCATCCAGAAGTTCTCT+GGG | 0.582774 | 6.1:+10343642 | MS.gene87921:CDS |
| TTGAACCCTAGAAGCAGAGA+AGG | 0.586114 | 6.1:-10343752 | None:intergenic |
| CGATATCCGACGATGATGGA+CGG | 0.588197 | 6.1:+10347071 | MS.gene87921:CDS |
| ATACTATGCTCAATTCAGAA+AGG | 0.596991 | 6.1:+10344283 | MS.gene87921:CDS |
| GATATCCGACGATGATGGAC+GGG | 0.597919 | 6.1:+10347072 | MS.gene87921:CDS |
| GTGCCCAGAGAACTTCTGGA+TGG | 0.615220 | 6.1:-10343645 | None:intergenic |
| TCTGTGAAGTGTGAGCCTCA+GGG | 0.627276 | 6.1:+10343721 | MS.gene87921:CDS |
| TATTGCTCTACCTGATGCCA+AGG | 0.634051 | 6.1:+10343693 | MS.gene87921:CDS |
| TTACGGATCGATTCAACCTG+AGG | 0.640397 | 6.1:+10343804 | MS.gene87921:CDS |
| AATTACCCGTCCATCATCGT+CGG | 0.645393 | 6.1:-10347077 | None:intergenic |
| TCAATTCAGAAAGGACAAAG+AGG | 0.648365 | 6.1:+10344292 | MS.gene87921:CDS |
| GAGAAGGTAAACAAACCCTG+AGG | 0.771648 | 6.1:-10343736 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTTATTTTTTAAAAA+AGG | + | chr6.1:10347694-10347713 | MS.gene87921:intron | 0.0% |
| !! | AATAACAAAAAAATTGAAAT+GGG | - | chr6.1:10342630-10342649 | None:intergenic | 10.0% |
| !! | TAATAACAAAAAAATTGAAA+TGG | - | chr6.1:10342631-10342650 | None:intergenic | 10.0% |
| !!! | AATATTTTCTCAAATTAAAT+AGG | + | chr6.1:10346885-10346904 | MS.gene87921:intron | 10.0% |
| !!! | AATTAATTTGATTTGATTTT+TGG | + | chr6.1:10343604-10343623 | MS.gene87921:intron | 10.0% |
| !!! | TTATCTATTTAATTTAGATT+CGG | - | chr6.1:10345852-10345871 | None:intergenic | 10.0% |
| !!! | TTTATTATGTAATTGAATTT+TGG | + | chr6.1:10343201-10343220 | MS.gene87921:intron | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr6.1:10345055-10345074 | MS.gene87921:intron | 100.0% |
| !! | ATGTATTATGAAATAAAGTA+AGG | - | chr6.1:10347648-10347667 | None:intergenic | 15.0% |
| !! | CAAAAGATATTAAATAAACA+AGG | - | chr6.1:10344978-10344997 | None:intergenic | 15.0% |
| !! | TAAGATACTAAGATTAAAAA+TGG | + | chr6.1:10344631-10344650 | MS.gene87921:intron | 15.0% |
| !! | TGTATTATGAAATAAAGTAA+GGG | - | chr6.1:10347647-10347666 | None:intergenic | 15.0% |
| !! | TTTATTAAGTAATTGAATAC+TGG | + | chr6.1:10342990-10343009 | MS.gene87921:intron | 15.0% |
| !! | TTTCTAATCATAATTAAACA+GGG | + | chr6.1:10344556-10344575 | MS.gene87921:intron | 15.0% |
| !!! | ATAAAAAAATGTTTTTCATC+TGG | + | chr6.1:10345332-10345351 | MS.gene87921:intron | 15.0% |
| !!! | ATAAGCTATTTCTATATTAA+AGG | + | chr6.1:10347434-10347453 | MS.gene87921:intron | 15.0% |
| !!! | ATCATAAAGTATTTTCTAAT+TGG | + | chr6.1:10344423-10344442 | MS.gene87921:intron | 15.0% |
| !!! | ATTCTATTTTTCTTTAACTA+TGG | + | chr6.1:10347787-10347806 | MS.gene87921:intron | 15.0% |
| !!! | TAATGTGCATATTTATTTTT+TGG | - | chr6.1:10345396-10345415 | None:intergenic | 15.0% |
| !!! | TTACTTTATTTCATAATACA+TGG | + | chr6.1:10347647-10347666 | MS.gene87921:intron | 15.0% |
| !!! | TTTTCATCATTATTTTTACA+AGG | - | chr6.1:10342693-10342712 | None:intergenic | 15.0% |
| !! | AAAAAAAAATCTTTCGACTA+GGG | - | chr6.1:10343580-10343599 | None:intergenic | 20.0% |
| !! | CAGAATATTGAAATGTTATA+GGG | - | chr6.1:10343362-10343381 | None:intergenic | 20.0% |
| !! | CAGATTATTGAAACTTAATA+GGG | - | chr6.1:10343161-10343180 | None:intergenic | 20.0% |
| !! | GTTATATTTGTAAGTTTCTT+GGG | + | chr6.1:10345035-10345054 | MS.gene87921:intron | 20.0% |
| !! | GTTTCTAATCATAATTAAAC+AGG | + | chr6.1:10344555-10344574 | MS.gene87921:intron | 20.0% |
| !! | TAAAAAAAAATCTTTCGACT+AGG | - | chr6.1:10343581-10343600 | None:intergenic | 20.0% |
| !! | TATACTTAAGATATGTGAAA+AGG | + | chr6.1:10345437-10345456 | MS.gene87921:intron | 20.0% |
| !! | TATCGAAATATTTGATATTG+CGG | + | chr6.1:10343430-10343449 | MS.gene87921:intron | 20.0% |
| !! | TCAGAATATTGAAATGTTAT+AGG | - | chr6.1:10343363-10343382 | None:intergenic | 20.0% |
| !! | TCAGATTATTGAAACTTAAT+AGG | - | chr6.1:10343162-10343181 | None:intergenic | 20.0% |
| !! | TGTTACCAATGATATATAAA+TGG | + | chr6.1:10345122-10345141 | MS.gene87921:intron | 20.0% |
| !! | TGTTATATTTGTAAGTTTCT+TGG | + | chr6.1:10345034-10345053 | MS.gene87921:intron | 20.0% |
| !! | TTATATTTGTAAGTTTCTTG+GGG | + | chr6.1:10345036-10345055 | MS.gene87921:intron | 20.0% |
| !! | TTATTGAGTATATTGAATGT+TGG | + | chr6.1:10342789-10342808 | MS.gene87921:intron | 20.0% |
| !! | TTATTGTACCACAATTAAAT+TGG | - | chr6.1:10345291-10345310 | None:intergenic | 20.0% |
| !! | TTCTTTAACTATGGATTTAA+AGG | + | chr6.1:10347796-10347815 | MS.gene87921:intron | 20.0% |
| !! | TTTACATGTTACAAACAAAT+GGG | - | chr6.1:10342744-10342763 | None:intergenic | 20.0% |
| !!! | AAGATTAACCCTTATTTATA+GGG | + | chr6.1:10344525-10344544 | MS.gene87921:intron | 20.0% |
| !!! | ACGTAATATAAAGGTTTTAA+AGG | + | chr6.1:10343921-10343940 | MS.gene87921:intron | 20.0% |
| !!! | ATGTATAGTGTTGTTTTTTA+CGG | + | chr6.1:10345594-10345613 | MS.gene87921:intron | 20.0% |
| !!! | ATTACCAACAAATATCATTT+TGG | - | chr6.1:10347299-10347318 | None:intergenic | 20.0% |
| !!! | TGAACAGAAAAAATTTTACA+AGG | - | chr6.1:10346669-10346688 | None:intergenic | 20.0% |
| !!! | TGCTGATATGATTTTAATAA+TGG | + | chr6.1:10342858-10342877 | MS.gene87921:intron | 20.0% |
| ! | AAAGGCCATTTATATATCAT+TGG | - | chr6.1:10345130-10345149 | None:intergenic | 25.0% |
| ! | AACTAAAACAATTCGTAAAG+TGG | - | chr6.1:10344163-10344182 | None:intergenic | 25.0% |
| ! | AATCATGGTATTTGATATTG+CGG | + | chr6.1:10343018-10343037 | MS.gene87921:intron | 25.0% |
| ! | AATTGTGGTACGTAATATAA+AGG | + | chr6.1:10343912-10343931 | MS.gene87921:intron | 25.0% |
| ! | AGACAATTATCATTTATGTC+AGG | - | chr6.1:10348045-10348064 | None:intergenic | 25.0% |
| ! | AGAGAAATCCAATTTAATTG+TGG | + | chr6.1:10345280-10345299 | MS.gene87921:intron | 25.0% |
| ! | AGTATATAATATCGTGTCAT+CGG | - | chr6.1:10345423-10345442 | None:intergenic | 25.0% |
| ! | ATATGCTCTATGAAATATGT+AGG | + | chr6.1:10347338-10347357 | MS.gene87921:intron | 25.0% |
| ! | ATATTCAAATGTTGTTGACA+CGG | + | chr6.1:10343047-10343066 | MS.gene87921:intron | 25.0% |
| ! | ATATTGTCATTGTTGTATCT+AGG | + | chr6.1:10344231-10344250 | MS.gene87921:intron | 25.0% |
| ! | ATTAGGATTATAACTGTGTT+AGG | + | chr6.1:10345089-10345108 | MS.gene87921:intron | 25.0% |
| ! | ATTTACTTAGATGCAAAAGA+TGG | + | chr6.1:10346373-10346392 | MS.gene87921:intron | 25.0% |
| ! | ATTTATTCCAATCAACTTTC+AGG | - | chr6.1:10344363-10344382 | None:intergenic | 25.0% |
| ! | CAACTTGAGTTCAAATATTA+TGG | + | chr6.1:10345990-10346009 | MS.gene87921:intron | 25.0% |
| ! | CAGAATATTGAAACTCTATA+GGG | - | chr6.1:10342960-10342979 | None:intergenic | 25.0% |
| ! | CATGAACATTTATATCTGTA+TGG | + | chr6.1:10344472-10344491 | MS.gene87921:intron | 25.0% |
| ! | CTTACCAAAATGATATTTGT+TGG | + | chr6.1:10347292-10347311 | MS.gene87921:intron | 25.0% |
| ! | CTTTACATGTTACAAACAAA+TGG | - | chr6.1:10342745-10342764 | None:intergenic | 25.0% |
| ! | TAAAAAATATTGAGAGAGAG+AGG | - | chr6.1:10347683-10347702 | None:intergenic | 25.0% |
| ! | TAATTAAAGTAGAGATGCAA+TGG | - | chr6.1:10347254-10347273 | None:intergenic | 25.0% |
| ! | TATATCCTAGTTTCAAATTG+TGG | + | chr6.1:10343897-10343916 | MS.gene87921:intron | 25.0% |
| ! | TATATTTGTAAGTTTCTTGG+GGG | + | chr6.1:10345037-10345056 | MS.gene87921:intron | 25.0% |
| ! | TATTGTCATTGTTGTATCTA+GGG | + | chr6.1:10344232-10344251 | MS.gene87921:intron | 25.0% |
| ! | TCAGAATATTGAAACTCTAT+AGG | - | chr6.1:10342961-10342980 | None:intergenic | 25.0% |
| ! | TTATTTGTATGAGTTTCTTG+AGG | + | chr6.1:10346972-10346991 | MS.gene87921:intron | 25.0% |
| ! | TTGATTATGTACATACTTTG+TGG | + | chr6.1:10343873-10343892 | MS.gene87921:intron | 25.0% |
| !! | AAAAAATGTTTTTCATCTGG+TGG | + | chr6.1:10345335-10345354 | MS.gene87921:intron | 25.0% |
| !! | AAATAAAGTAAGGGTTTGTT+TGG | - | chr6.1:10347638-10347657 | None:intergenic | 25.0% |
| !! | AAATGTGGTTTTTGATATTG+TGG | + | chr6.1:10343229-10343248 | MS.gene87921:intron | 25.0% |
| !! | AACCTTTTCAAAACATGATA+AGG | - | chr6.1:10344194-10344213 | None:intergenic | 25.0% |
| !! | AATTGTGGTTTTTGATATTG+TGG | + | chr6.1:10342817-10342836 | MS.gene87921:intron | 25.0% |
| !! | GAAGATTAACCCTTATTTAT+AGG | + | chr6.1:10344524-10344543 | MS.gene87921:intron | 25.0% |
| !! | TAAGTAAATAATCAAGTTGC+AGG | - | chr6.1:10346362-10346381 | None:intergenic | 25.0% |
| !! | TATTCCTTTTTACGTCATTT+CGG | + | chr6.1:10344794-10344813 | MS.gene87921:intron | 25.0% |
| !! | TGAAAGTTGATTGGAATAAA+TGG | + | chr6.1:10344362-10344381 | MS.gene87921:CDS | 25.0% |
| !! | TTACAAGGATGTGATTTTTA+TGG | - | chr6.1:10342678-10342697 | None:intergenic | 25.0% |
| !! | TTTTGGATTAAGCAAGATTT+TGG | + | chr6.1:10345957-10345976 | MS.gene87921:intron | 25.0% |
| !!! | TGAATACTGGTTTTAAATCA+TGG | + | chr6.1:10343003-10343022 | MS.gene87921:intron | 25.0% |
| !!! | TGAATTTTGGTTTTGAAATG+TGG | + | chr6.1:10343214-10343233 | MS.gene87921:intron | 25.0% |
| !!! | TGCATTTTTTCACATTATCA+AGG | + | chr6.1:10343987-10344006 | MS.gene87921:intron | 25.0% |
| !!! | TTATCATGTTTTGAAAAGGT+TGG | + | chr6.1:10344193-10344212 | MS.gene87921:intron | 25.0% |
| !!! | TTCCTTATCATGTTTTGAAA+AGG | + | chr6.1:10344189-10344208 | MS.gene87921:intron | 25.0% |
| AAAACAATTCGTAAAGTGGA+CGG | - | chr6.1:10344159-10344178 | None:intergenic | 30.0% | |
| AAAAGTTGTTGGAAGTTGAA+TGG | + | chr6.1:10346153-10346172 | MS.gene87921:intron | 30.0% | |
| AAAGTTGTTGGAAGTTGAAT+GGG | + | chr6.1:10346154-10346173 | MS.gene87921:intron | 30.0% | |
| ACAAGTTATCCTAGAGTTTA+TGG | + | chr6.1:10347503-10347522 | MS.gene87921:intron | 30.0% | |
| ACAATGACAATATTTCAGAC+AGG | - | chr6.1:10344224-10344243 | None:intergenic | 30.0% | |
| ACCGTTTATCCCTATAAATA+AGG | - | chr6.1:10344537-10344556 | None:intergenic | 30.0% | |
| ACTAACATGTAGAAATCACA+TGG | - | chr6.1:10344502-10344521 | None:intergenic | 30.0% | |
| ACTAAGCTGAAAACAGTTTA+TGG | + | chr6.1:10347527-10347546 | MS.gene87921:intron | 30.0% | |
| AGACTAAGTTCACTACAATT+AGG | - | chr6.1:10345155-10345174 | None:intergenic | 30.0% | |
| ATACTATGCTCAATTCAGAA+AGG | + | chr6.1:10344283-10344302 | MS.gene87921:CDS | 30.0% | |
| ATATTTGTAAGTTTCTTGGG+GGG | + | chr6.1:10345038-10345057 | MS.gene87921:intron | 30.0% | |
| ATTGAAAGCTGTCTAACAAA+AGG | + | chr6.1:10345254-10345273 | MS.gene87921:intron | 30.0% | |
| ATTGAACAAGATTAAGTACC+TGG | - | chr6.1:10347156-10347175 | None:intergenic | 30.0% | |
| CCGTTTATCCCTATAAATAA+GGG | - | chr6.1:10344536-10344555 | None:intergenic | 30.0% | |
| CTCATACAAATAAGAAAGCA+AGG | - | chr6.1:10346965-10346984 | None:intergenic | 30.0% | |
| CTTATGCATAAGCACTTATA+TGG | - | chr6.1:10347419-10347438 | None:intergenic | 30.0% | |
| GTTCACTACAATTAGGATAA+AGG | - | chr6.1:10345148-10345167 | None:intergenic | 30.0% | |
| GTTCAGAATCCATTTATCAA+TGG | - | chr6.1:10345622-10345641 | None:intergenic | 30.0% | |
| TAGGGTTGTAAAACTAAAAC+TGG | + | chr6.1:10344250-10344269 | MS.gene87921:intron | 30.0% | |
| TATCATTTATGTCAGGTGTA+AGG | - | chr6.1:10348038-10348057 | None:intergenic | 30.0% | |
| TATGAAAAACTTTCATAGCC+CGG | - | chr6.1:10344057-10344076 | None:intergenic | 30.0% | |
| TCTAACAGTCATTATGATCT+TGG | + | chr6.1:10344710-10344729 | MS.gene87921:intron | 30.0% | |
| TCTAATACGGTAAAAACTGA+GGG | - | chr6.1:10346230-10346249 | None:intergenic | 30.0% | |
| TGAAAAAATGCAGACAAATG+TGG | - | chr6.1:10343979-10343998 | None:intergenic | 30.0% | |
| TGAGTTCAAATATTATGGTC+TGG | + | chr6.1:10345995-10346014 | MS.gene87921:intron | 30.0% | |
| TGGTATAGTATATAGAGACA+AGG | + | chr6.1:10346583-10346602 | MS.gene87921:intron | 30.0% | |
| TGTCTGATTAAAGTTTCTGT+TGG | + | chr6.1:10347031-10347050 | MS.gene87921:intron | 30.0% | |
| TTCAGTGAAAGTAAAACGAA+GGG | - | chr6.1:10342558-10342577 | None:intergenic | 30.0% | |
| TTGAAACTGATAGTATGACA+TGG | + | chr6.1:10347908-10347927 | MS.gene87921:intron | 30.0% | |
| TTGAAAGCTGTCTAACAAAA+GGG | + | chr6.1:10345255-10345274 | MS.gene87921:intron | 30.0% | |
| TTTCAGTGAAAGTAAAACGA+AGG | - | chr6.1:10342559-10342578 | None:intergenic | 30.0% | |
| ! | ACCTTTGAAAACTAGAAACA+TGG | - | chr6.1:10346737-10346756 | None:intergenic | 30.0% |
| ! | AGTCAAATTGTTTTCATGCA+AGG | + | chr6.1:10347466-10347485 | MS.gene87921:intron | 30.0% |
| ! | ATGTTTTGTGCTTTACTTCT+TGG | + | chr6.1:10346563-10346582 | MS.gene87921:intron | 30.0% |
| ! | CCCTTATTTATAGGGATAAA+CGG | + | chr6.1:10344533-10344552 | MS.gene87921:intron | 30.0% |
| ! | GCTTATTTGAGTTTATCTAC+TGG | - | chr6.1:10347611-10347630 | None:intergenic | 30.0% |
| ! | GTGAGTGATCTTTTCTTAAA+TGG | + | chr6.1:10343826-10343845 | MS.gene87921:intron | 30.0% |
| !! | TTCATTTTAGTCATCTCTAG+TGG | + | chr6.1:10346422-10346441 | MS.gene87921:intron | 30.0% |
| !!! | ACCATGTTTCTAGTTTTCAA+AGG | + | chr6.1:10346733-10346752 | MS.gene87921:intron | 30.0% |
| !!! | GCAAAATAGTGGATTTTCAT+TGG | - | chr6.1:10347860-10347879 | None:intergenic | 30.0% |
| !!! | TGAATGTTGGTTTTGAATTG+TGG | + | chr6.1:10342802-10342821 | MS.gene87921:intron | 30.0% |
| AAACAATTCGTAAAGTGGAC+GGG | - | chr6.1:10344158-10344177 | None:intergenic | 35.0% | |
| AACAGTCATTATGATCTTGG+AGG | + | chr6.1:10344713-10344732 | MS.gene87921:intron | 35.0% | |
| AAGATATGTGAAAAGGCTGA+GGG | + | chr6.1:10345444-10345463 | MS.gene87921:intron | 35.0% | |
| AAGTTCCAAGCTAAAGCTAT+AGG | - | chr6.1:10343785-10343804 | None:intergenic | 35.0% | |
| ACCTATAGCACACAATATCA+AGG | + | chr6.1:10346179-10346198 | MS.gene87921:intron | 35.0% | |
| AGAAATAAGCCAGGTTTGAT+AGG | - | chr6.1:10344747-10344766 | None:intergenic | 35.0% | |
| AGAATGAGTTACTGCAGAAA+GGG | - | chr6.1:10344868-10344887 | None:intergenic | 35.0% | |
| AGCTTAGTTCCATAAACTCT+AGG | - | chr6.1:10347515-10347534 | None:intergenic | 35.0% | |
| AGTAGGATCAATGACTATAC+TGG | + | chr6.1:10345720-10345739 | MS.gene87921:intron | 35.0% | |
| ATGAGTAAGATTACGCAATG+AGG | - | chr6.1:10345236-10345255 | None:intergenic | 35.0% | |
| ATTACGCAATGAGGAAACTT+GGG | - | chr6.1:10345227-10345246 | None:intergenic | 35.0% | |
| ATTTATGTCAGGTGTAAGGT+GGG | - | chr6.1:10348034-10348053 | None:intergenic | 35.0% | |
| CAATCACAATGTAGTTGAAG+AGG | - | chr6.1:10343947-10343966 | None:intergenic | 35.0% | |
| CCTTAACACAACAAACAGAT+GGG | + | chr6.1:10346055-10346074 | MS.gene87921:intron | 35.0% | |
| CGTCAAATTAGCGTCTAATA+CGG | - | chr6.1:10346243-10346262 | None:intergenic | 35.0% | |
| CTCTCAAAAGTTGAGTAATG+TGG | - | chr6.1:10347882-10347901 | None:intergenic | 35.0% | |
| GCGATGTTAAGAAAAGTTGT+TGG | + | chr6.1:10346142-10346161 | MS.gene87921:intron | 35.0% | |
| GCTAATTTGACGACTATACT+CGG | + | chr6.1:10346251-10346270 | MS.gene87921:intron | 35.0% | |
| GTCTAATACGGTAAAAACTG+AGG | - | chr6.1:10346231-10346250 | None:intergenic | 35.0% | |
| TAAATAGGACCTTAGCATCA+TGG | + | chr6.1:10346900-10346919 | MS.gene87921:intron | 35.0% | |
| TAAGATATGTGAAAAGGCTG+AGG | + | chr6.1:10345443-10345462 | MS.gene87921:intron | 35.0% | |
| TAGAATGAGTTACTGCAGAA+AGG | - | chr6.1:10344869-10344888 | None:intergenic | 35.0% | |
| TATTTGTAAGTTTCTTGGGG+GGG | + | chr6.1:10345039-10345058 | MS.gene87921:intron | 35.0% | |
| TCAATTCAGAAAGGACAAAG+AGG | + | chr6.1:10344292-10344311 | MS.gene87921:CDS | 35.0% | |
| TCACTAGCTCATAACTAATC+AGG | - | chr6.1:10345537-10345556 | None:intergenic | 35.0% | |
| TCCTTAACACAACAAACAGA+TGG | + | chr6.1:10346054-10346073 | MS.gene87921:intron | 35.0% | |
| TGAAAGTAAAACGAAGGGAA+AGG | - | chr6.1:10342553-10342572 | None:intergenic | 35.0% | |
| TGAAATATGTAGGCTCAGTT+TGG | + | chr6.1:10347348-10347367 | MS.gene87921:intron | 35.0% | |
| TGACAATATCTAGTATAGCC+TGG | - | chr6.1:10346280-10346299 | None:intergenic | 35.0% | |
| TGAGTAATGTGGCAAAATAG+TGG | - | chr6.1:10347871-10347890 | None:intergenic | 35.0% | |
| TTGTGGAGAATTGTGATCAA+AGG | + | chr6.1:10343246-10343265 | MS.gene87921:intron | 35.0% | |
| ! | AAACAGTTGTTTGATTTCGC+AGG | - | chr6.1:10347766-10347785 | None:intergenic | 35.0% |
| ! | AAGAATTTTGAACCGCAACA+CGG | - | chr6.1:10343296-10343315 | None:intergenic | 35.0% |
| ! | ACGTACCACAATTTGAAACT+AGG | - | chr6.1:10343905-10343924 | None:intergenic | 35.0% |
| ! | ACTTAGTCTAGAATGTTAGC+AGG | + | chr6.1:10345166-10345185 | MS.gene87921:intron | 35.0% |
| ! | CATTTTACCAATTGTTGTCC+GGG | + | chr6.1:10344036-10344055 | MS.gene87921:intron | 35.0% |
| ! | CCATTTTACCAATTGTTGTC+CGG | + | chr6.1:10344035-10344054 | MS.gene87921:intron | 35.0% |
| ! | TCAAAAAGTGCAGACAAATG+TGG | - | chr6.1:10344104-10344123 | None:intergenic | 35.0% |
| ! | TCTAGAATGTTAGCAGGAAT+GGG | + | chr6.1:10345172-10345191 | MS.gene87921:intron | 35.0% |
| ! | TTCCAATCAACTTTCAGGTA+TGG | - | chr6.1:10344358-10344377 | None:intergenic | 35.0% |
| ! | TTTCATCTTTTGCAGTTTGC+TGG | + | chr6.1:10347180-10347199 | MS.gene87921:intron | 35.0% |
| ! | TTTTAATAATGGCCGTGTTG+TGG | + | chr6.1:10342869-10342888 | MS.gene87921:intron | 35.0% |
| !! | AGCTTTAGCTTGGAACTTTA+CGG | + | chr6.1:10343787-10343806 | MS.gene87921:CDS | 35.0% |
| !! | AGTGGATTTTCATTGGATGT+CGG | - | chr6.1:10347853-10347872 | None:intergenic | 35.0% |
| !! | TGAATCCTATAGCTTTAGCT+TGG | + | chr6.1:10343777-10343796 | MS.gene87921:CDS | 35.0% |
| !!! | CATGTTTTGAAAAGGTTGGA+TGG | + | chr6.1:10344197-10344216 | MS.gene87921:intron | 35.0% |
| AAACAAAATGAGCATGGCTG+AGG | - | chr6.1:10344833-10344852 | None:intergenic | 40.0% | |
| AAACCACTTGTGAGGCTATT+TGG | - | chr6.1:10347585-10347604 | None:intergenic | 40.0% | |
| AACCACTTGTGAGGCTATTT+GGG | - | chr6.1:10347584-10347603 | None:intergenic | 40.0% | |
| AAGAAAAGATCACTCACCTC+AGG | - | chr6.1:10343823-10343842 | None:intergenic | 40.0% | |
| ACACTTCACAGAAACATCCT+TGG | - | chr6.1:10343713-10343732 | None:intergenic | 40.0% | |
| ACCACAGAGATAACAATGGT+AGG | - | chr6.1:10345804-10345823 | None:intergenic | 40.0% | |
| ACCTCATCTATTAGCTGCTT+TGG | + | chr6.1:10345640-10345659 | MS.gene87921:intron | 40.0% | |
| ACTGGTATAAACCACTTGTG+AGG | - | chr6.1:10347593-10347612 | None:intergenic | 40.0% | |
| AGAAGAAATGTGACAAGCAG+TGG | - | chr6.1:10346339-10346358 | None:intergenic | 40.0% | |
| AGAAGGGGAAAAATAGGTAG+TGG | - | chr6.1:10346467-10346486 | None:intergenic | 40.0% | |
| AGAATCACATTCAAAGGCAG+CGG | + | chr6.1:10343453-10343472 | MS.gene87921:intron | 40.0% | |
| AGAGACAAGGAGACTAACAA+TGG | + | chr6.1:10346596-10346615 | MS.gene87921:intron | 40.0% | |
| AGGATCAATGACTATACTGG+TGG | + | chr6.1:10345723-10345742 | MS.gene87921:intron | 40.0% | |
| AGTCTAAGTCGCAACATCAA+AGG | - | chr6.1:10343532-10343551 | None:intergenic | 40.0% | |
| ATATGCAGTGACTACATTGC+AGG | - | chr6.1:10344930-10344949 | None:intergenic | 40.0% | |
| ATGTGTTGGAGAAATAAGCC+AGG | - | chr6.1:10344756-10344775 | None:intergenic | 40.0% | |
| ATTTGTAAGTTTCTTGGGGG+GGG | + | chr6.1:10345040-10345059 | MS.gene87921:intron | 40.0% | |
| CAAGCCGAAATGACGTAAAA+AGG | - | chr6.1:10344801-10344820 | None:intergenic | 40.0% | |
| CATTTATGTCAGGTGTAAGG+TGG | - | chr6.1:10348035-10348054 | None:intergenic | 40.0% | |
| CCACATTGTGATTGCAATTG+CGG | + | chr6.1:10344078-10344097 | MS.gene87921:intron | 40.0% | |
| CCGGACAACAATTGGTAAAA+TGG | - | chr6.1:10344038-10344057 | None:intergenic | 40.0% | |
| CTACATTGTGATTGCAACTG+CGG | + | chr6.1:10343953-10343972 | MS.gene87921:intron | 40.0% | |
| CTGCTCAAACAAAATGAGCA+TGG | - | chr6.1:10344839-10344858 | None:intergenic | 40.0% | |
| CTTCAATGAAGTCTGTGTTC+AGG | + | chr6.1:10343482-10343501 | MS.gene87921:intron | 40.0% | |
| CTTCACCACAGAGATAACAA+TGG | - | chr6.1:10345808-10345827 | None:intergenic | 40.0% | |
| GAACAAGATTAAGTACCTGG+AGG | - | chr6.1:10347153-10347172 | None:intergenic | 40.0% | |
| GATCAATGACTATACTGGTG+AGG | + | chr6.1:10345725-10345744 | MS.gene87921:intron | 40.0% | |
| GATTACGCAATGAGGAAACT+TGG | - | chr6.1:10345228-10345247 | None:intergenic | 40.0% | |
| GCCTTGATATTGTGTGCTAT+AGG | - | chr6.1:10346183-10346202 | None:intergenic | 40.0% | |
| GTAGAGTTTAACAAACCTCC+AGG | + | chr6.1:10347135-10347154 | MS.gene87921:intron | 40.0% | |
| GTGAGGATCAATGACTATAC+TGG | + | chr6.1:10345742-10345761 | MS.gene87921:intron | 40.0% | |
| GTTCAATTGCCTATCAAACC+TGG | + | chr6.1:10344735-10344754 | MS.gene87921:intron | 40.0% | |
| GTTCTGATCAAACTCAAGGT+AGG | - | chr6.1:10345515-10345534 | None:intergenic | 40.0% | |
| GTTTACCTTCTCTGCTTCTA+GGG | + | chr6.1:10343747-10343766 | MS.gene87921:CDS | 40.0% | |
| TACGGTAAAAACTGAGGGTA+AGG | - | chr6.1:10346225-10346244 | None:intergenic | 40.0% | |
| TCATAAACTGCCACATGTGA+CGG | - | chr6.1:10345005-10345024 | None:intergenic | 40.0% | |
| TCATCTCTAGTGGTAGAAAG+TGG | + | chr6.1:10346432-10346451 | MS.gene87921:intron | 40.0% | |
| TGTTATCTCTGTGGTGAAGA+AGG | + | chr6.1:10345809-10345828 | MS.gene87921:intron | 40.0% | |
| TGTTGACACGGTTTCAATGA+TGG | + | chr6.1:10343059-10343078 | MS.gene87921:intron | 40.0% | |
| TGTTTACCTTCTCTGCTTCT+AGG | + | chr6.1:10343746-10343765 | MS.gene87921:CDS | 40.0% | |
| TTCAGAAAGGACAAAGAGGT+TGG | + | chr6.1:10344296-10344315 | MS.gene87921:CDS | 40.0% | |
| TTGCGGAGAATCACATTCAA+AGG | + | chr6.1:10343447-10343466 | MS.gene87921:intron | 40.0% | |
| TTGTGGAGAATCACGATCAA+AGG | + | chr6.1:10342834-10342853 | MS.gene87921:intron | 40.0% | |
| TTGTTGTGTTAAGGAGAGGA+GGG | - | chr6.1:10346049-10346068 | None:intergenic | 40.0% | |
| TTTACGGCGCCATTGATAAA+TGG | + | chr6.1:10345610-10345629 | MS.gene87921:intron | 40.0% | |
| TTTCAATGATGGTCGTGTTG+TGG | + | chr6.1:10343070-10343089 | MS.gene87921:intron | 40.0% | |
| ! | AAGAGTGACTGCTGTGATTT+TGG | + | chr6.1:10345940-10345959 | MS.gene87921:intron | 40.0% |
| ! | CACCATACCTGAAAGTTGAT+TGG | + | chr6.1:10344353-10344372 | MS.gene87921:CDS | 40.0% |
| ! | GAAAAATAGGTAGTGGTCAG+TGG | - | chr6.1:10346460-10346479 | None:intergenic | 40.0% |
| ! | GTCTAGAATGTTAGCAGGAA+TGG | + | chr6.1:10345171-10345190 | MS.gene87921:intron | 40.0% |
| ! | TAGCTGCTTTGGCTAGTATA+GGG | + | chr6.1:10345651-10345670 | MS.gene87921:intron | 40.0% |
| ! | TCAGGTTCTGATCAAACTCA+AGG | - | chr6.1:10345519-10345538 | None:intergenic | 40.0% |
| ! | TGGCTTATTTCTCCAACACA+TGG | + | chr6.1:10344755-10344774 | MS.gene87921:intron | 40.0% |
| ! | TTAGCTGCTTTGGCTAGTAT+AGG | + | chr6.1:10345650-10345669 | MS.gene87921:intron | 40.0% |
| ! | TTTGTTGTGTTAAGGAGAGG+AGG | - | chr6.1:10346050-10346069 | None:intergenic | 40.0% |
| !! | CCCATCTGTTTGTTGTGTTA+AGG | - | chr6.1:10346058-10346077 | None:intergenic | 40.0% |
| !! | CTGTTTGTTGTGTTAAGGAG+AGG | - | chr6.1:10346053-10346072 | None:intergenic | 40.0% |
| !!! | TGCTGATATGGTTTTGACGA+TGG | + | chr6.1:10343270-10343289 | MS.gene87921:intron | 40.0% |
| AATTACCCGTCCATCATCGT+CGG | - | chr6.1:10347080-10347099 | None:intergenic | 45.0% | |
| ACAACAAACAGATGGGCCAA+AGG | + | chr6.1:10346062-10346081 | MS.gene87921:intron | 45.0% | |
| ACAGAAACATCCTTGGCATC+AGG | - | chr6.1:10343706-10343725 | None:intergenic | 45.0% | |
| ACTTGTGAGGCTATTTGGGA+GGG | - | chr6.1:10347580-10347599 | None:intergenic | 45.0% | |
| AGAAAGGACAAAGAGGTTGG+TGG | + | chr6.1:10344299-10344318 | MS.gene87921:CDS | 45.0% | |
| AGGTGTAAGGTGGGAATAAG+AGG | - | chr6.1:10348025-10348044 | None:intergenic | 45.0% | |
| ATCAAAACCCTCTGATGTCG+CGG | + | chr6.1:10342902-10342921 | MS.gene87921:intron | 45.0% | |
| ATCAGAAACTGTTGATGCCG+CGG | + | chr6.1:10343103-10343122 | MS.gene87921:intron | 45.0% | |
| ATCTCACGAGCTCAGAATCT+AGG | - | chr6.1:10345576-10345595 | None:intergenic | 45.0% | |
| ATGACTGAAGACAGACTGCA+GGG | - | chr6.1:10346494-10346513 | None:intergenic | 45.0% | |
| ATGTCTCTGCAACCACAACA+CGG | - | chr6.1:10342884-10342903 | None:intergenic | 45.0% | |
| ATTTGCCTTGGGTGTCAGAT+TGG | + | chr6.1:10346931-10346950 | MS.gene87921:intron | 45.0% | |
| CATAAACTGCCACATGTGAC+GGG | - | chr6.1:10345004-10345023 | None:intergenic | 45.0% | |
| CATCAGGTAGAGCAATAGTC+AGG | - | chr6.1:10343690-10343709 | None:intergenic | 45.0% | |
| CCGCAATTGCAATCACAATG+TGG | - | chr6.1:10344081-10344100 | None:intergenic | 45.0% | |
| GAATGTTAGCAGGAATGGGA+AGG | + | chr6.1:10345176-10345195 | MS.gene87921:intron | 45.0% | |
| GACACCCAAGGCAAATTACA+GGG | - | chr6.1:10346927-10346946 | None:intergenic | 45.0% | |
| GAGAAGGTAAACAAACCCTG+AGG | - | chr6.1:10343739-10343758 | None:intergenic | 45.0% | |
| GAGACGTTAATCCTAGCAGT+TGG | + | chr6.1:10345474-10345493 | MS.gene87921:intron | 45.0% | |
| GATGAAAGCAGTGACGATGA+AGG | + | chr6.1:10347210-10347229 | MS.gene87921:CDS | 45.0% | |
| GATGCAAAAGATGGCATGAC+TGG | + | chr6.1:10346382-10346401 | MS.gene87921:intron | 45.0% | |
| GCAAAAATCTGCCAACTGCT+AGG | - | chr6.1:10345488-10345507 | None:intergenic | 45.0% | |
| GCCAAAGCAGCTAATAGATG+AGG | - | chr6.1:10345644-10345663 | None:intergenic | 45.0% | |
| GCCTACCATTGTTATCTCTG+TGG | + | chr6.1:10345800-10345819 | MS.gene87921:intron | 45.0% | |
| GGGAAGAGAAGGGGAAAAAT+AGG | - | chr6.1:10346473-10346492 | None:intergenic | 45.0% | |
| GGGGGGGGTAATAGAATATT+AGG | + | chr6.1:10345072-10345091 | MS.gene87921:intron | 45.0% | |
| GTCAGCAAAGAACCATGTGT+TGG | - | chr6.1:10344770-10344789 | None:intergenic | 45.0% | |
| GTGATCAAAGGCTGCTGATA+TGG | + | chr6.1:10343258-10343277 | MS.gene87921:intron | 45.0% | |
| TATTGCTCTACCTGATGCCA+AGG | + | chr6.1:10343693-10343712 | MS.gene87921:CDS | 45.0% | |
| TCGTGAGTCATACACAACGA+AGG | + | chr6.1:10346120-10346139 | MS.gene87921:intron | 45.0% | |
| TGACACCCAAGGCAAATTAC+AGG | - | chr6.1:10346928-10346947 | None:intergenic | 45.0% | |
| TGACTACATTGCAGGACAGT+TGG | - | chr6.1:10344922-10344941 | None:intergenic | 45.0% | |
| TTACAGGGACCATGATGCTA+AGG | - | chr6.1:10346912-10346931 | None:intergenic | 45.0% | |
| TTCATAGCCCGGACAACAAT+TGG | - | chr6.1:10344046-10344065 | None:intergenic | 45.0% | |
| TTGAACCAATCTGACACCCA+AGG | - | chr6.1:10346939-10346958 | None:intergenic | 45.0% | |
| TTGAACCCTAGAAGCAGAGA+AGG | - | chr6.1:10343755-10343774 | None:intergenic | 45.0% | |
| TTTGTAAGTTTCTTGGGGGG+GGG | + | chr6.1:10345041-10345060 | MS.gene87921:intron | 45.0% | |
| ! | AGCTGCTTTGGCTAGTATAG+GGG | + | chr6.1:10345652-10345671 | MS.gene87921:intron | 45.0% |
| ! | AGGTCGTGAGAGCATAATGT+TGG | - | chr6.1:10346205-10346224 | None:intergenic | 45.0% |
| ! | ATGGTCCCTGTAATTTGCCT+TGG | + | chr6.1:10346919-10346938 | MS.gene87921:intron | 45.0% |
| ! | TCAACTTTCAGGTATGGTGC+AGG | - | chr6.1:10344352-10344371 | None:intergenic | 45.0% |
| ! | TGGTCCCTGTAATTTGCCTT+GGG | + | chr6.1:10346920-10346939 | MS.gene87921:intron | 45.0% |
| ! | TTACGGATCGATTCAACCTG+AGG | + | chr6.1:10343804-10343823 | MS.gene87921:CDS | 45.0% |
| !! | AGATCTCCCTGACTTGGAAA+AGG | + | chr6.1:10348068-10348087 | MS.gene87921:intron | 45.0% |
| !! | GACAAAGAGGTTGGTGGAAA+AGG | + | chr6.1:10344305-10344324 | MS.gene87921:CDS | 45.0% |
| !! | ATAAAAATAAATTGTTTAAA+AGG | - | chr6.1:10343186-10343205 | None:intergenic | 5.0% |
| ACATTCAAAGGCAGCGGACA+CGG | + | chr6.1:10343459-10343478 | MS.gene87921:intron | 50.0% | |
| ACCACGAGCGATTGAGATTG+CGG | + | chr6.1:10345886-10345905 | MS.gene87921:intron | 50.0% | |
| AGAAGGACACAGGAGGTGAT+GGG | + | chr6.1:10345694-10345713 | MS.gene87921:intron | 50.0% | |
| ATGTGAAAAGGCTGAGGGTG+TGG | + | chr6.1:10345449-10345468 | MS.gene87921:intron | 50.0% | |
| CACAGCAGTCACTCTTCTGT+AGG | - | chr6.1:10345936-10345955 | None:intergenic | 50.0% | |
| CACTTGTGAGGCTATTTGGG+AGG | - | chr6.1:10347581-10347600 | None:intergenic | 50.0% | |
| CAGGTAGATGAGAAGGACAC+AGG | + | chr6.1:10345684-10345703 | MS.gene87921:intron | 50.0% | |
| CGTCCATCATCGTCGGATAT+CGG | - | chr6.1:10347073-10347092 | None:intergenic | 50.0% | |
| CTCCCAAATAGCCTCACAAG+TGG | + | chr6.1:10347579-10347598 | MS.gene87921:intron | 50.0% | |
| CTCGACTACAATATGAGCCG+CGG | - | chr6.1:10343123-10343142 | None:intergenic | 50.0% | |
| GAACCGATATCCGACGATGA+TGG | + | chr6.1:10347067-10347086 | MS.gene87921:CDS | 50.0% | |
| GACGACTATACTCGGATTCC+AGG | + | chr6.1:10346259-10346278 | MS.gene87921:intron | 50.0% | |
| GATCAAACTCAAGGTAGGCC+AGG | - | chr6.1:10345510-10345529 | None:intergenic | 50.0% | |
| GATGACTGAAGACAGACTGC+AGG | - | chr6.1:10346495-10346514 | None:intergenic | 50.0% | |
| GCGACTTAGACTACAGTTCG+CGG | + | chr6.1:10343540-10343559 | MS.gene87921:intron | 50.0% | |
| GCGATTGAGATTGCGGAGTT+TGG | + | chr6.1:10345893-10345912 | MS.gene87921:intron | 50.0% | |
| GGTAGAGCAGGTAGATGAGA+AGG | + | chr6.1:10345677-10345696 | MS.gene87921:intron | 50.0% | |
| GTAGATGAGAAGGACACAGG+AGG | + | chr6.1:10345687-10345706 | MS.gene87921:intron | 50.0% | |
| TAAGGAGAGGAGGGTGGTTT+GGG | - | chr6.1:10346040-10346059 | None:intergenic | 50.0% | |
| TCGCCATCCAGAAGTTCTCT+GGG | + | chr6.1:10343642-10343661 | MS.gene87921:CDS | 50.0% | |
| TCTGTGAAGTGTGAGCCTCA+GGG | + | chr6.1:10343721-10343740 | MS.gene87921:CDS | 50.0% | |
| TCTTGCAGATCTCCCTGACT+TGG | + | chr6.1:10348062-10348081 | MS.gene87921:intron | 50.0% | |
| TGACTGAAGACAGACTGCAG+GGG | - | chr6.1:10346493-10346512 | None:intergenic | 50.0% | |
| TTAAGGAGAGGAGGGTGGTT+TGG | - | chr6.1:10346041-10346060 | None:intergenic | 50.0% | |
| TTCCAATGTCTCTGCAGTCG+CGG | - | chr6.1:10343508-10343527 | None:intergenic | 50.0% | |
| TTCTGTGAAGTGTGAGCCTC+AGG | + | chr6.1:10343720-10343739 | MS.gene87921:CDS | 50.0% | |
| TTGTAAGTTTCTTGGGGGGG+GGG | + | chr6.1:10345042-10345061 | MS.gene87921:intron | 50.0% | |
| TTGTGTTAAGGAGAGGAGGG+TGG | - | chr6.1:10346046-10346065 | None:intergenic | 50.0% | |
| ! | GCAGTTGGCAGATTTTTGCC+TGG | + | chr6.1:10345489-10345508 | MS.gene87921:intron | 50.0% |
| ! | GCTGCTTTGGCTAGTATAGG+GGG | + | chr6.1:10345653-10345672 | MS.gene87921:intron | 50.0% |
| ! | TTTTGACGATGGCCGTGTTG+CGG | + | chr6.1:10343281-10343300 | MS.gene87921:intron | 50.0% |
| !! | CCCTAGCCTTTTCCAAGTCA+GGG | - | chr6.1:10348077-10348096 | None:intergenic | 50.0% |
| !! | CCCTGACTTGGAAAAGGCTA+GGG | + | chr6.1:10348074-10348093 | MS.gene87921:CDS | 50.0% |
| !! | CGATATCCGACGATGATGGA+CGG | + | chr6.1:10347071-10347090 | MS.gene87921:CDS | 50.0% |
| !! | GATATCCGACGATGATGGAC+GGG | + | chr6.1:10347072-10347091 | MS.gene87921:CDS | 50.0% |
| !! | TCCCTGACTTGGAAAAGGCT+AGG | + | chr6.1:10348073-10348092 | MS.gene87921:CDS | 50.0% |
| !!! | CTTTTGAAGCCCGTCACATG+TGG | + | chr6.1:10344992-10345011 | MS.gene87921:intron | 50.0% |
| AATCTGAGCCGCGACATCAG+AGG | - | chr6.1:10342913-10342932 | None:intergenic | 55.0% | |
| ACAGACTGCAGGGGAAGAGA+AGG | - | chr6.1:10346484-10346503 | None:intergenic | 55.0% | |
| AGACTGCAGGGGAAGAGAAG+GGG | - | chr6.1:10346482-10346501 | None:intergenic | 55.0% | |
| AGTATAGGGGGTGGTAGAGC+AGG | + | chr6.1:10345665-10345684 | MS.gene87921:intron | 55.0% | |
| AGTCGCTCGAGTGCAATGAG+CGG | - | chr6.1:10346098-10346117 | None:intergenic | 55.0% | |
| ATCTGAGCCGCGACATCAGA+GGG | - | chr6.1:10342912-10342931 | None:intergenic | 55.0% | |
| CACAGCTCAGCTTGTAGTCG+AGG | + | chr6.1:10343322-10343341 | MS.gene87921:intron | 55.0% | |
| CAGACTGCAGGGGAAGAGAA+GGG | - | chr6.1:10346483-10346502 | None:intergenic | 55.0% | |
| CGCGGCTCATATTGTAGTCG+AGG | + | chr6.1:10343121-10343140 | MS.gene87921:intron | 55.0% | |
| CTCGACTACAAGCTGAGCTG+TGG | - | chr6.1:10343324-10343343 | None:intergenic | 55.0% | |
| GAGAAGGACACAGGAGGTGA+TGG | + | chr6.1:10345693-10345712 | MS.gene87921:intron | 55.0% | |
| GCTTTGGCTAGTATAGGGGG+TGG | + | chr6.1:10345656-10345675 | MS.gene87921:intron | 55.0% | |
| GTCGCCATCCAGAAGTTCTC+TGG | + | chr6.1:10343641-10343660 | MS.gene87921:intron | 55.0% | |
| GTGCCCAGAGAACTTCTGGA+TGG | - | chr6.1:10343648-10343667 | None:intergenic | 55.0% | |
| TCCGCAATCTCAATCGCTCG+TGG | - | chr6.1:10345890-10345909 | None:intergenic | 55.0% | |
| TCGAGTGCAATGAGCGGAGA+GGG | - | chr6.1:10346092-10346111 | None:intergenic | 55.0% | |
| TGTAAGTTTCTTGGGGGGGG+GGG | + | chr6.1:10345043-10345062 | MS.gene87921:intron | 55.0% | |
| ! | AGAGGAGGGTGGTTTGGGTT+AGG | - | chr6.1:10346035-10346054 | None:intergenic | 55.0% |
| ! | GAGGAGGGTGGTTTGGGTTA+GGG | - | chr6.1:10346034-10346053 | None:intergenic | 55.0% |
| !! | CAGGAGGTGATGGGTGTAGT+AGG | + | chr6.1:10345703-10345722 | MS.gene87921:intron | 55.0% |
| !! | GCCCTAGCCTTTTCCAAGTC+AGG | - | chr6.1:10348078-10348097 | None:intergenic | 55.0% |
| CGCGGCTCAGATTGTAGTCG+AGG | + | chr6.1:10342920-10342939 | MS.gene87921:intron | 60.0% | |
| CGCTGTGCCCAGAGAACTTC+TGG | - | chr6.1:10343652-10343671 | None:intergenic | 60.0% | |
| CTCGAGTGCAATGAGCGGAG+AGG | - | chr6.1:10346093-10346112 | None:intergenic | 60.0% | |
| CTGGGCACAGCGTTCTGGTA+AGG | + | chr6.1:10343660-10343679 | MS.gene87921:CDS | 60.0% | |
| GTAAGTTTCTTGGGGGGGGG+GGG | + | chr6.1:10345044-10345063 | MS.gene87921:intron | 60.0% | |
| GTTCTCTGGGCACAGCGTTC+TGG | + | chr6.1:10343655-10343674 | MS.gene87921:CDS | 60.0% | |
| TAAGTTTCTTGGGGGGGGGG+GGG | + | chr6.1:10345045-10345064 | MS.gene87921:intron | 60.0% | |
| AAGTTTCTTGGGGGGGGGGG+GGG | + | chr6.1:10345046-10345065 | MS.gene87921:intron | 65.0% | |
| GGCCGCGACTGCAGAGACAT+TGG | + | chr6.1:10343503-10343522 | MS.gene87921:intron | 65.0% | |
| AGTTTCTTGGGGGGGGGGGG+GGG | + | chr6.1:10345047-10345066 | MS.gene87921:intron | 70.0% | |
| !! | GAGCGGAGAGGGAGCGCCTT+TGG | - | chr6.1:10346081-10346100 | None:intergenic | 70.0% |
| GTTTCTTGGGGGGGGGGGGG+GGG | + | chr6.1:10345048-10345067 | MS.gene87921:intron | 75.0% | |
| TTTCTTGGGGGGGGGGGGGG+GGG | + | chr6.1:10345049-10345068 | MS.gene87921:intron | 75.0% | |
| ! | TTCTTGGGGGGGGGGGGGGG+GGG | + | chr6.1:10345050-10345069 | MS.gene87921:intron | 80.0% |
| ! | TCTTGGGGGGGGGGGGGGGG+GGG | + | chr6.1:10345051-10345070 | MS.gene87921:intron | 85.0% |
| ! | CTTGGGGGGGGGGGGGGGGG+GGG | + | chr6.1:10345052-10345071 | MS.gene87921:intron | 90.0% |
| ! | TTGGGGGGGGGGGGGGGGGG+GGG | + | chr6.1:10345053-10345072 | MS.gene87921:intron | 90.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | + | chr6.1:10345054-10345073 | MS.gene87921:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 10342539 | 10348104 | 10342539 | ID=MS.gene87921 |
| chr6.1 | mRNA | 10342539 | 10348104 | 10342539 | ID=MS.gene87921.t1;Parent=MS.gene87921 |
| chr6.1 | exon | 10342539 | 10342543 | 10342539 | ID=MS.gene87921.t1.exon1;Parent=MS.gene87921.t1 |
| chr6.1 | CDS | 10342539 | 10342543 | 10342539 | ID=cds.MS.gene87921.t1;Parent=MS.gene87921.t1 |
| chr6.1 | exon | 10343642 | 10343825 | 10343642 | ID=MS.gene87921.t1.exon2;Parent=MS.gene87921.t1 |
| chr6.1 | CDS | 10343642 | 10343825 | 10343642 | ID=cds.MS.gene87921.t1;Parent=MS.gene87921.t1 |
| chr6.1 | exon | 10344253 | 10344409 | 10344253 | ID=MS.gene87921.t1.exon3;Parent=MS.gene87921.t1 |
| chr6.1 | CDS | 10344253 | 10344409 | 10344253 | ID=cds.MS.gene87921.t1;Parent=MS.gene87921.t1 |
| chr6.1 | exon | 10347065 | 10347093 | 10347065 | ID=MS.gene87921.t1.exon4;Parent=MS.gene87921.t1 |
| chr6.1 | CDS | 10347065 | 10347093 | 10347065 | ID=cds.MS.gene87921.t1;Parent=MS.gene87921.t1 |
| chr6.1 | exon | 10347195 | 10347240 | 10347195 | ID=MS.gene87921.t1.exon5;Parent=MS.gene87921.t1 |
| chr6.1 | CDS | 10347195 | 10347240 | 10347195 | ID=cds.MS.gene87921.t1;Parent=MS.gene87921.t1 |
| chr6.1 | exon | 10348070 | 10348104 | 10348070 | ID=MS.gene87921.t1.exon6;Parent=MS.gene87921.t1 |
| chr6.1 | CDS | 10348070 | 10348104 | 10348070 | ID=cds.MS.gene87921.t1;Parent=MS.gene87921.t1 |
| Gene Sequence |
| Protein sequence |
