Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89037.t1 | XP_003597878.1 | 86.3 | 313 | 12 | 1 | 59 | 340 | 21 | 333 | 1.10E-98 | 370.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89037.t1 | Q66L33 | 49.1 | 169 | 84 | 1 | 62 | 230 | 25 | 191 | 1.1e-40 | 168.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89037.t1 | Q2HUC0 | 86.3 | 313 | 12 | 1 | 59 | 340 | 21 | 333 | 7.6e-99 | 370.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050277 | MS.gene89037 | 0.816566 | 5.18E-52 | -1.69E-46 |
| MS.gene051903 | MS.gene89037 | 0.81234 | 4.45E-51 | -1.69E-46 |
| MS.gene056403 | MS.gene89037 | 0.803646 | 3.16E-49 | -1.69E-46 |
| MS.gene057094 | MS.gene89037 | 0.80926 | 2.07E-50 | -1.69E-46 |
| MS.gene058238 | MS.gene89037 | 0.807462 | 5.00E-50 | -1.69E-46 |
| MS.gene06001 | MS.gene89037 | 0.82742 | 1.58E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene07704 | MS.gene89037 | PPI |
| MS.gene52150 | MS.gene89037 | PPI |
| MS.gene061905 | MS.gene89037 | PPI |
| MS.gene020215 | MS.gene89037 | PPI |
| MS.gene09845 | MS.gene89037 | PPI |
| MS.gene018553 | MS.gene89037 | PPI |
| MS.gene89037 | MS.gene022752 | PPI |
| MS.gene39294 | MS.gene89037 | PPI |
| MS.gene45646 | MS.gene89037 | PPI |
| MS.gene058018 | MS.gene89037 | PPI |
| MS.gene003435 | MS.gene89037 | PPI |
| MS.gene89037 | MS.gene64512 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89037.t1 | MTR_2g103560 | 88.818 | 313 | 4 | 1 | 59 | 340 | 21 | 333 | 0.0 | 560 |
| MS.gene89037.t1 | MTR_4g079190 | 71.329 | 286 | 53 | 5 | 59 | 339 | 21 | 282 | 2.22e-121 | 351 |
| MS.gene89037.t1 | MTR_1g048860 | 76.712 | 146 | 3 | 1 | 168 | 282 | 5 | 150 | 1.14e-47 | 158 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89037.t1 | AT1G23280 | 70.690 | 174 | 50 | 1 | 59 | 232 | 21 | 193 | 1.06e-83 | 256 |
Find 76 sgRNAs with CRISPR-Local
Find 380 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGATGACATGGAAGATTT+TGG | 0.235599 | 2.4:-1973083 | MS.gene89037:CDS |
| AATCCGCATCTGGGTCATTT+TGG | 0.284801 | 2.4:+1975300 | None:intergenic |
| CAAATTCCAGTGACATTGTA+AGG | 0.318003 | 2.4:+1976105 | None:intergenic |
| GCAAATTGAGATGGAGATAG+TGG | 0.342543 | 2.4:-1973379 | MS.gene89037:CDS |
| TTCTGCATTAACAGATGTAT+TGG | 0.350434 | 2.4:-1975360 | MS.gene89037:intron |
| AATGATGCCGATCATGAAAA+TGG | 0.350819 | 2.4:-1973032 | MS.gene89037:intron |
| TCCTCATACGAATCCGCATC+TGG | 0.358008 | 2.4:+1975290 | None:intergenic |
| CTGGTTGCGAACCTACATTT+TGG | 0.361173 | 2.4:+1973349 | None:intergenic |
| TCTCTCTTTGTCTCTTTCCT+TGG | 0.372921 | 2.4:+1973711 | None:intergenic |
| ATCTTGTGTACGAGAAGCTT+TGG | 0.393893 | 2.4:+1975337 | None:intergenic |
| GCAGAAGTAGAATATGTAGA+AGG | 0.404197 | 2.4:-1973122 | MS.gene89037:CDS |
| GTACTATAAAGTTCTTGATA+TGG | 0.407319 | 2.4:-1973298 | MS.gene89037:CDS |
| ACTCTTTCCCACAAATCCTT+TGG | 0.416287 | 2.4:+1975516 | None:intergenic |
| TGTCACACCTACACGGTTGC+CGG | 0.423599 | 2.4:-1976957 | MS.gene89037:CDS |
| TCAAAACTCGACATCGTAGA+AGG | 0.432632 | 2.4:+1977867 | None:intergenic |
| TAGCTAAAGGGCAAGAGCTT+CGG | 0.455266 | 2.4:+1976079 | None:intergenic |
| CTCATACGCCAAAGGATTTG+TGG | 0.458884 | 2.4:-1975524 | MS.gene89037:CDS |
| AAGAGACAAAGAGAGAATCT+AGG | 0.459447 | 2.4:-1973704 | MS.gene89037:CDS |
| TCTTCATCCTCTTCATCAGC+AGG | 0.463201 | 2.4:+1973264 | None:intergenic |
| TTTCAATAGTCTTCATGTAA+AGG | 0.467452 | 2.4:+1975550 | None:intergenic |
| TGCTTACGAAAGACAAAGAT+TGG | 0.476293 | 2.4:-1971486 | MS.gene89037:CDS |
| ATGTCATGTGTGCTTTATGC+GGG | 0.479124 | 2.4:-1977829 | MS.gene89037:CDS |
| AGCTTCAAAGAAACTTGAAA+AGG | 0.479994 | 2.4:-1972121 | MS.gene89037:CDS |
| AGGAATTACGAACAGGCACT+TGG | 0.500734 | 2.4:-1975483 | MS.gene89037:CDS |
| CCCAGATGCGGATTCGTATG+AGG | 0.505873 | 2.4:-1975291 | MS.gene89037:CDS |
| TGGAGTCATCGACAAACATC+TGG | 0.509833 | 2.4:-1975463 | MS.gene89037:intron |
| GTTTGCAATTCATGAGTCAC+AGG | 0.511321 | 2.4:-1973057 | MS.gene89037:CDS |
| GGAAACTTGCTTTGAAAACA+AGG | 0.511440 | 2.4:-1975270 | MS.gene89037:intron |
| TTTCTTTGATTTAGTATCAA+GGG | 0.513045 | 2.4:+1972095 | None:intergenic |
| CATAGCGACTATTAGCTAAA+GGG | 0.516684 | 2.4:+1976067 | None:intergenic |
| GCATAGCGACTATTAGCTAA+AGG | 0.516741 | 2.4:+1976066 | None:intergenic |
| AGTGCCTGTTCGTAATTCCT+AGG | 0.526835 | 2.4:+1975486 | None:intergenic |
| TCATACGCCAAAGGATTTGT+GGG | 0.528939 | 2.4:-1975523 | MS.gene89037:CDS |
| GCTTCAACCTGCTGATGAAG+AGG | 0.533182 | 2.4:-1973271 | MS.gene89037:CDS |
| ACTTTATAGTACGCTTCAGT+AGG | 0.533622 | 2.4:+1973309 | None:intergenic |
| ACCTTTGTCTTCACGAATGG+TGG | 0.540955 | 2.4:+1976044 | None:intergenic |
| AGAAACCCTTACAATGTCAC+TGG | 0.541886 | 2.4:-1976111 | MS.gene89037:CDS |
| CAAAATGTAGGTTCGCAACC+AGG | 0.546579 | 2.4:-1973348 | MS.gene89037:CDS |
| GGGAAAGAGTTAAGCTGCCT+AGG | 0.548712 | 2.4:-1975503 | MS.gene89037:CDS |
| GCTGCCTAGGAATTACGAAC+AGG | 0.552927 | 2.4:-1975490 | MS.gene89037:CDS |
| TACCTGTGGAAGCTGTTCTC+CGG | 0.556203 | 2.4:+1976938 | None:intergenic |
| CCTCATACGAATCCGCATCT+GGG | 0.557645 | 2.4:+1975291 | None:intergenic |
| TGCTGATGAAGAGGATGAAG+AGG | 0.563447 | 2.4:-1973262 | MS.gene89037:intron |
| AGTACCTTTGTCTTCACGAA+TGG | 0.571730 | 2.4:+1976041 | None:intergenic |
| CTGTTCTCCGGCAACCGTGT+AGG | 0.572078 | 2.4:+1976950 | None:intergenic |
| GTAATCAGAGGAAAGCCAAA+AGG | 0.573419 | 2.4:-1972155 | MS.gene89037:CDS |
| AGAAGGTTATGAACTTGAAG+AGG | 0.575452 | 2.4:-1973105 | MS.gene89037:CDS |
| TGCCGGAGAACAGCTTCCAC+AGG | 0.580441 | 2.4:-1976940 | MS.gene89037:intron |
| AGAATCTAGGAGAGAAGCAA+AGG | 0.580474 | 2.4:-1973691 | MS.gene89037:CDS |
| TGTGTTCGTAGAATTACGAC+GGG | 0.581825 | 2.4:-1976144 | MS.gene89037:intron |
| GTGGGACGCCTCCAAAATGT+AGG | 0.582304 | 2.4:-1973360 | MS.gene89037:CDS |
| AAATTCCAGTGACATTGTAA+GGG | 0.584410 | 2.4:+1976106 | None:intergenic |
| GAAAACGAAGGTCCTCATTG+AGG | 0.590120 | 2.4:-1972076 | MS.gene89037:intron |
| TAATACTTAGCAAATTGAGA+TGG | 0.596304 | 2.4:-1973388 | MS.gene89037:intron |
| GATGTCATGTGTGCTTTATG+CGG | 0.603126 | 2.4:-1977830 | MS.gene89037:CDS |
| ACTTGAAGAGGAAGATGACA+TGG | 0.603621 | 2.4:-1973093 | MS.gene89037:CDS |
| CACCTAGAGCAACAATGAGT+CGG | 0.610404 | 2.4:-1977981 | None:intergenic |
| CAAATTGAGATGGAGATAGT+GGG | 0.613797 | 2.4:-1973378 | MS.gene89037:CDS |
| GGATAGTTGAATATTTCACC+TGG | 0.619836 | 2.4:+1973330 | None:intergenic |
| AACAAATAATAACACTACCA+AGG | 0.623666 | 2.4:-1973728 | MS.gene89037:CDS |
| AAACTGAAGCACGTAATCAG+AGG | 0.629054 | 2.4:-1972167 | MS.gene89037:CDS |
| TGAAAGAGCTCATACGCCAA+AGG | 0.633610 | 2.4:-1975532 | MS.gene89037:CDS |
| AGTATTAAATTACCTCAATG+AGG | 0.639733 | 2.4:+1972064 | None:intergenic |
| TCGCCGCTGTCACACCTACA+CGG | 0.641398 | 2.4:-1976964 | MS.gene89037:CDS |
| AACAGCGGCTGCTATAGAGA+AGG | 0.646322 | 2.4:-1973664 | MS.gene89037:intron |
| TTGTGTTCGTAGAATTACGA+CGG | 0.646833 | 2.4:-1976145 | MS.gene89037:intron |
| TGACCAAAATGACCCAGATG+CGG | 0.657520 | 2.4:-1975303 | MS.gene89037:CDS |
| AGAAGCAAAGGCTCAAACAG+CGG | 0.657728 | 2.4:-1973679 | MS.gene89037:CDS |
| GCCACCATTCGTGAAGACAA+AGG | 0.662439 | 2.4:-1976045 | MS.gene89037:intron |
| TTTGCAATTCATGAGTCACA+GGG | 0.672082 | 2.4:-1973056 | MS.gene89037:CDS |
| TACTAAATCAAAGAAAACGA+AGG | 0.700083 | 2.4:-1972088 | MS.gene89037:CDS |
| CATGTGTGCTTTATGCGGGG+AGG | 0.706131 | 2.4:-1977825 | MS.gene89037:CDS |
| TGTCATGTGTGCTTTATGCG+GGG | 0.714246 | 2.4:-1977828 | MS.gene89037:CDS |
| GTGTAGGTGTGACAGCGGCG+AGG | 0.715171 | 2.4:+1976966 | None:intergenic |
| CAACCGTGTAGGTGTGACAG+CGG | 0.719630 | 2.4:+1976961 | None:intergenic |
| GTGTTCGTAGAATTACGACG+GGG | 0.805175 | 2.4:-1976143 | MS.gene89037:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGGAAATAAAAATATAAAAA+AGG | + | chr2.4:1974339-1974358 | None:intergenic | 10.0% |
| !! | ATGAAATTTAATTAAAATAC+TGG | + | chr2.4:1975420-1975439 | None:intergenic | 10.0% |
| !! | TATTATATTTACATAGTTTA+GGG | - | chr2.4:1973190-1973209 | MS.gene89037:intron | 10.0% |
| !! | TTATTATATTTACATAGTTT+AGG | - | chr2.4:1973189-1973208 | MS.gene89037:intron | 10.0% |
| !!! | ACAAATGTTATTTAAAATAT+TGG | + | chr2.4:1974767-1974786 | None:intergenic | 10.0% |
| !!! | ATTTATTTAAAATCAGTAAT+AGG | + | chr2.4:1977586-1977605 | None:intergenic | 10.0% |
| !!! | CAAATGTTATTTAAAATATT+GGG | + | chr2.4:1974766-1974785 | None:intergenic | 10.0% |
| !!! | CTATATGAAAATATTTTATA+CGG | - | chr2.4:1974407-1974426 | MS.gene89037:intron | 10.0% |
| !!! | TATATGAAAATATTTTATAC+GGG | - | chr2.4:1974408-1974427 | MS.gene89037:intron | 10.0% |
| !! | AAAAAAAATCAATCAGATAT+AGG | + | chr2.4:1974922-1974941 | None:intergenic | 15.0% |
| !! | AAATCATATACAGATATATT+TGG | + | chr2.4:1975546-1975565 | None:intergenic | 15.0% |
| !! | AACATATAATTTAATATGCA+TGG | + | chr2.4:1975828-1975847 | None:intergenic | 15.0% |
| !! | AATATAATAAGTAATTCCTA+AGG | + | chr2.4:1973179-1973198 | None:intergenic | 15.0% |
| !! | AATCATATACAGATATATTT+GGG | + | chr2.4:1975545-1975564 | None:intergenic | 15.0% |
| !! | GTACATTTATAATAGTATTA+GGG | + | chr2.4:1975571-1975590 | None:intergenic | 15.0% |
| !! | TATTGTATTTAAATAGTGTA+AGG | + | chr2.4:1972809-1972828 | None:intergenic | 15.0% |
| !! | TGTACATTTATAATAGTATT+AGG | + | chr2.4:1975572-1975591 | None:intergenic | 15.0% |
| !! | TTATGATATCAATAATTGTA+GGG | + | chr2.4:1976561-1976580 | None:intergenic | 15.0% |
| !! | TTTAAATTATTAGTGAAAAC+AGG | + | chr2.4:1974359-1974378 | None:intergenic | 15.0% |
| !!! | AAATTATTCTAATTTGAAAC+AGG | + | chr2.4:1972744-1972763 | None:intergenic | 15.0% |
| !!! | AATATTTTTTAAGAGTGTTT+GGG | + | chr2.4:1975180-1975199 | None:intergenic | 15.0% |
| !!! | AATTATTCTAATTTGAAACA+GGG | + | chr2.4:1972743-1972762 | None:intergenic | 15.0% |
| !!! | ATAAATTTTTGTTTAGAGAT+CGG | + | chr2.4:1972128-1972147 | None:intergenic | 15.0% |
| !!! | ATGAAAAAAGTTGTATATTT+TGG | + | chr2.4:1974824-1974843 | None:intergenic | 15.0% |
| !!! | ATGAATTTTAAAAAGTATCT+TGG | - | chr2.4:1972324-1972343 | MS.gene89037:intron | 15.0% |
| !!! | ATTAGTTTGAAAATTTATAG+AGG | + | chr2.4:1972036-1972055 | None:intergenic | 15.0% |
| !!! | CGTATAAAATATTTTCATAT+AGG | + | chr2.4:1974409-1974428 | None:intergenic | 15.0% |
| !!! | TAATATTTTTTAAGAGTGTT+TGG | + | chr2.4:1975181-1975200 | None:intergenic | 15.0% |
| !!! | TATTTTCATATAGGAAAAAA+AGG | + | chr2.4:1974400-1974419 | None:intergenic | 15.0% |
| !!! | TTGATTTTTGTTATCATTTT+TGG | - | chr2.4:1974573-1974592 | MS.gene89037:intron | 15.0% |
| !!! | TTTTAAATAACATTTGTACT+AGG | - | chr2.4:1974770-1974789 | MS.gene89037:intron | 15.0% |
| !! | AAAAAAATGGAAAAGAAAAG+AGG | + | chr2.4:1973282-1973301 | None:intergenic | 20.0% |
| !! | AAATATGTGTATTCAAACAT+CGG | + | chr2.4:1972292-1972311 | None:intergenic | 20.0% |
| !! | AAATTAAATAATATGCAGCT+TGG | + | chr2.4:1974275-1974294 | None:intergenic | 20.0% |
| !! | AAGCAATTCAAATGATAAAA+AGG | - | chr2.4:1977064-1977083 | MS.gene89037:intron | 20.0% |
| !! | AAGTAATCAAAATTTGAACT+TGG | + | chr2.4:1973591-1973610 | None:intergenic | 20.0% |
| !! | AATTCACCCTAAAATTAAAT+GGG | + | chr2.4:1975390-1975409 | None:intergenic | 20.0% |
| !! | AGTAATCAAAATTTGAACTT+GGG | + | chr2.4:1973590-1973609 | None:intergenic | 20.0% |
| !! | AGTCATGATATTAGTATATA+TGG | - | chr2.4:1975073-1975092 | MS.gene89037:intron | 20.0% |
| !! | ATAATCTACTAACAATGATT+TGG | - | chr2.4:1971843-1971862 | MS.gene89037:intron | 20.0% |
| !! | ATCAAAATTAATATCCAACA+GGG | + | chr2.4:1973720-1973739 | None:intergenic | 20.0% |
| !! | CAATAACAAGTATAAAAGAT+GGG | + | chr2.4:1974450-1974469 | None:intergenic | 20.0% |
| !! | CTGATAAGTAATTTAAATGA+AGG | - | chr2.4:1974845-1974864 | MS.gene89037:intron | 20.0% |
| !! | CTTATGATATCAATAATTGT+AGG | + | chr2.4:1976562-1976581 | None:intergenic | 20.0% |
| !! | GATAAAGAAAAGTTTGTAAA+AGG | - | chr2.4:1976621-1976640 | MS.gene89037:intron | 20.0% |
| !! | GATTCCTAAATAAACAAATA+TGG | + | chr2.4:1974995-1975014 | None:intergenic | 20.0% |
| !! | TAATTCACCCTAAAATTAAA+TGG | + | chr2.4:1975391-1975410 | None:intergenic | 20.0% |
| !! | TATAATTACATCTAACAAGT+GGG | + | chr2.4:1974716-1974735 | None:intergenic | 20.0% |
| !! | TATCAAAATTAATATCCAAC+AGG | + | chr2.4:1973721-1973740 | None:intergenic | 20.0% |
| !! | TCAATAACAAGTATAAAAGA+TGG | + | chr2.4:1974451-1974470 | None:intergenic | 20.0% |
| !! | TCAGAAAGAAAAAAAAACAA+AGG | + | chr2.4:1975307-1975326 | None:intergenic | 20.0% |
| !! | TCATTAAGTATATGGATAAT+AGG | - | chr2.4:1971538-1971557 | MS.gene89037:intron | 20.0% |
| !! | TGTACCATATTTGTTTATTT+AGG | - | chr2.4:1974988-1975007 | MS.gene89037:intron | 20.0% |
| !! | TTATTGAACATGAAAAAAGT+GGG | - | chr2.4:1974464-1974483 | MS.gene89037:intron | 20.0% |
| !! | TTCATTCAAATCTTTGAATT+CGG | + | chr2.4:1971955-1971974 | None:intergenic | 20.0% |
| !! | TTTAATTAAAATACTGGACA+AGG | + | chr2.4:1975414-1975433 | None:intergenic | 20.0% |
| !! | TTTAATTCAAATACTTGACA+AGG | + | chr2.4:1975251-1975270 | None:intergenic | 20.0% |
| !!! | AACATTTTTTCAATTCAGTT+TGG | - | chr2.4:1974676-1974695 | MS.gene89037:intron | 20.0% |
| !!! | ACATTTTTTCAATTCAGTTT+GGG | - | chr2.4:1974677-1974696 | MS.gene89037:intron | 20.0% |
| !!! | AGTTTTTTGTAGTTTATACA+AGG | + | chr2.4:1977411-1977430 | None:intergenic | 20.0% |
| !!! | ATTATTTAATTTCTGCATGT+TGG | - | chr2.4:1974283-1974302 | MS.gene89037:intron | 20.0% |
| !!! | TGAATGATTTTATATACCTT+AGG | - | chr2.4:1973160-1973179 | MS.gene89037:intron | 20.0% |
| !!! | TGTGAATGTTATGATTTTAT+TGG | - | chr2.4:1975439-1975458 | MS.gene89037:intron | 20.0% |
| !!! | TTTCTTTGATTTAGTATCAA+GGG | + | chr2.4:1977353-1977372 | None:intergenic | 20.0% |
| !!! | TTTTCTTTGATTTAGTATCA+AGG | + | chr2.4:1977354-1977373 | None:intergenic | 20.0% |
| !!! | TTTTTAAAGAATACATCATC+CGG | + | chr2.4:1972253-1972272 | None:intergenic | 20.0% |
| !!! | TTTTTCTTTTCAAATTGAAC+AGG | - | chr2.4:1976298-1976317 | MS.gene89037:intron | 20.0% |
| !!! | TTTTTGTTTATAACAATGAC+CGG | - | chr2.4:1972231-1972250 | MS.gene89037:intron | 20.0% |
| ! | AAAAGTAGACAAAAATATGC+AGG | + | chr2.4:1974968-1974987 | None:intergenic | 25.0% |
| ! | AAAATCAAGATTGTGATATC+AGG | + | chr2.4:1977913-1977932 | None:intergenic | 25.0% |
| ! | AAAATTGTAAAGGGCTAATT+AGG | - | chr2.4:1972384-1972403 | MS.gene89037:intron | 25.0% |
| ! | AAATAAATGATGCTACAAAC+TGG | - | chr2.4:1977598-1977617 | MS.gene89037:intron | 25.0% |
| ! | AAATGTTAAATCCCCTAAAA+TGG | + | chr2.4:1974663-1974682 | None:intergenic | 25.0% |
| ! | AACAAATAATAACACTACCA+AGG | - | chr2.4:1975717-1975736 | MS.gene89037:intron | 25.0% |
| ! | AACATATAATTTAACGTGTG+TGG | + | chr2.4:1976007-1976026 | None:intergenic | 25.0% |
| ! | AAGTGTAGAATTGATATACT+TGG | + | chr2.4:1972719-1972738 | None:intergenic | 25.0% |
| ! | AATACATCAAGCAAAAGAAA+GGG | + | chr2.4:1977749-1977768 | None:intergenic | 25.0% |
| ! | AATATTCAAAAGCAACAATG+AGG | + | chr2.4:1975862-1975881 | None:intergenic | 25.0% |
| ! | AATCAATCAGATATAGGAAA+AGG | + | chr2.4:1974916-1974935 | None:intergenic | 25.0% |
| ! | AATTTCGTTACTTGTAATAG+TGG | - | chr2.4:1975028-1975047 | MS.gene89037:intron | 25.0% |
| ! | ACATATAATTTAACGTGTGT+GGG | + | chr2.4:1976006-1976025 | None:intergenic | 25.0% |
| ! | ACCTTAAGTCATTAAGTATA+TGG | - | chr2.4:1971530-1971549 | MS.gene89037:intron | 25.0% |
| ! | AGTATTAAATTACCTCAATG+AGG | + | chr2.4:1977384-1977403 | None:intergenic | 25.0% |
| ! | AGTGTTCTGTTATAATTTGA+AGG | - | chr2.4:1977558-1977577 | MS.gene89037:intron | 25.0% |
| ! | AGTTCATCCTAAAATTAGAT+GGG | + | chr2.4:1975227-1975246 | None:intergenic | 25.0% |
| ! | ATCAATCAGATATAGGAAAA+GGG | + | chr2.4:1974915-1974934 | None:intergenic | 25.0% |
| ! | ATTATTCAAAAGCAACAATG+AGG | + | chr2.4:1976041-1976060 | None:intergenic | 25.0% |
| ! | ATTCACCCTAAAATTAAATG+GGG | + | chr2.4:1975389-1975408 | None:intergenic | 25.0% |
| ! | ATTCTACGAACACAAAAAAA+TGG | + | chr2.4:1973295-1973314 | None:intergenic | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | + | chr2.4:1972196-1972215 | None:intergenic | 25.0% |
| ! | GAAAAAAAGGTAAAGCAATA+TGG | + | chr2.4:1974387-1974406 | None:intergenic | 25.0% |
| ! | GTACTATAAAGTTCTTGATA+TGG | - | chr2.4:1976147-1976166 | MS.gene89037:intron | 25.0% |
| ! | GTATAATTACATCTAACAAG+TGG | + | chr2.4:1974717-1974736 | None:intergenic | 25.0% |
| ! | GTTATTGAACATGAAAAAAG+TGG | - | chr2.4:1974463-1974482 | MS.gene89037:intron | 25.0% |
| ! | GTTCTGATAAACAACTTATT+TGG | - | chr2.4:1972893-1972912 | MS.gene89037:intron | 25.0% |
| ! | TAATACTTAGCAAATTGAGA+TGG | - | chr2.4:1976057-1976076 | MS.gene89037:CDS | 25.0% |
| ! | TACTAAATCAAAGAAAACGA+AGG | - | chr2.4:1977357-1977376 | MS.gene89037:intron | 25.0% |
| ! | TAGTTCATCCTAAAATTAGA+TGG | + | chr2.4:1975228-1975247 | None:intergenic | 25.0% |
| ! | TATTGAACATGAAAAAAGTG+GGG | - | chr2.4:1974465-1974484 | MS.gene89037:intron | 25.0% |
| ! | TCCATATACTTAATGACTTA+AGG | + | chr2.4:1971534-1971553 | None:intergenic | 25.0% |
| ! | TGATAACAAAAATCAAACAG+CGG | + | chr2.4:1974569-1974588 | None:intergenic | 25.0% |
| ! | TTAATATGCATGGTAACATT+AGG | + | chr2.4:1975818-1975837 | None:intergenic | 25.0% |
| ! | TTAGATTTCAGCTAGAAATT+AGG | - | chr2.4:1973454-1973473 | MS.gene89037:intron | 25.0% |
| ! | TTGAAAATATGACAAGTAAC+TGG | + | chr2.4:1976944-1976963 | None:intergenic | 25.0% |
| ! | TTTCAATAGTCTTCATGTAA+AGG | + | chr2.4:1973898-1973917 | None:intergenic | 25.0% |
| !! | AAGTTTATGGACTAAATTGA+TGG | - | chr2.4:1973233-1973252 | MS.gene89037:intron | 25.0% |
| !! | AATGTTACCATTTTCATGAT+CGG | + | chr2.4:1976423-1976442 | None:intergenic | 25.0% |
| !! | ACATAATATACGTTTTCCAA+TGG | - | chr2.4:1976586-1976605 | MS.gene89037:intron | 25.0% |
| !! | GTGTTAAAACATCCATTTTA+GGG | - | chr2.4:1974648-1974667 | MS.gene89037:intron | 25.0% |
| !! | TAATTCATTTTACTCTGTTG+TGG | - | chr2.4:1976217-1976236 | MS.gene89037:intron | 25.0% |
| !! | TATGAGTGTTACGATTTTAT+AGG | - | chr2.4:1975274-1975293 | MS.gene89037:CDS | 25.0% |
| !! | TCTTGATTTTCATTGTTTTC+AGG | - | chr2.4:1977923-1977942 | MS.gene89037:intron | 25.0% |
| !! | TGTAAAAGGTCTTATACTTA+GGG | - | chr2.4:1976635-1976654 | MS.gene89037:intron | 25.0% |
| !! | TGTTAAAACATCCATTTTAG+GGG | - | chr2.4:1974649-1974668 | MS.gene89037:intron | 25.0% |
| !! | TTGTAAAAGGTCTTATACTT+AGG | - | chr2.4:1976634-1976653 | MS.gene89037:intron | 25.0% |
| !!! | ACTCATGATTTTTGTTTGAA+TGG | + | chr2.4:1976476-1976495 | None:intergenic | 25.0% |
| !!! | CTGTTCTTTTAATTGCTATT+GGG | - | chr2.4:1977433-1977452 | MS.gene89037:intron | 25.0% |
| !!! | GTTGCTTTTGAATATTACTT+AGG | - | chr2.4:1975866-1975885 | MS.gene89037:intron | 25.0% |
| !!! | TAAAATGGATGTTTTAACAC+CGG | + | chr2.4:1974648-1974667 | None:intergenic | 25.0% |
| !!! | TAATGACTTAAGGTTTTGAA+CGG | + | chr2.4:1971524-1971543 | None:intergenic | 25.0% |
| !!! | TCATGAGTATTGAGAAAAAT+AGG | - | chr2.4:1976488-1976507 | MS.gene89037:intron | 25.0% |
| !!! | TCTGTTCTTTTAATTGCTAT+TGG | - | chr2.4:1977432-1977451 | MS.gene89037:intron | 25.0% |
| !!! | TTTCACCCCATTTAATTTTA+GGG | - | chr2.4:1975381-1975400 | MS.gene89037:intron | 25.0% |
| !!! | TTTGATATAGGATTTTGAGA+TGG | - | chr2.4:1971694-1971713 | MS.gene89037:intron | 25.0% |
| !!! | TTTTCACCCCATTTAATTTT+AGG | - | chr2.4:1975380-1975399 | MS.gene89037:intron | 25.0% |
| AAAAGAAAGGGAAGTCATAA+GGG | + | chr2.4:1977737-1977756 | None:intergenic | 30.0% | |
| AAAATATGACAAGTAACTGG+AGG | + | chr2.4:1976941-1976960 | None:intergenic | 30.0% | |
| AAATTCCAGTGACATTGTAA+GGG | + | chr2.4:1973342-1973361 | None:intergenic | 30.0% | |
| AACAGATGATTAACGAACTT+TGG | + | chr2.4:1971648-1971667 | None:intergenic | 30.0% | |
| AAGGTCTGGTAATATACATT+TGG | + | chr2.4:1977109-1977128 | None:intergenic | 30.0% | |
| AAGTTCTTAGAGACTTAACT+TGG | - | chr2.4:1976255-1976274 | MS.gene89037:intron | 30.0% | |
| ACAACTCAACCATTTCTTTA+GGG | - | chr2.4:1977496-1977515 | MS.gene89037:intron | 30.0% | |
| ACACTGACAACTGTATATAT+AGG | + | chr2.4:1977543-1977562 | None:intergenic | 30.0% | |
| ACATAGTTTAGGGACTAAAT+TGG | - | chr2.4:1973200-1973219 | MS.gene89037:intron | 30.0% | |
| ACCTAAAAGATAGTAGATCA+AGG | + | chr2.4:1975617-1975636 | None:intergenic | 30.0% | |
| AGCTTCAAAGAAACTTGAAA+AGG | - | chr2.4:1977324-1977343 | MS.gene89037:intron | 30.0% | |
| AGGTCTGGTAATATACATTT+GGG | + | chr2.4:1977108-1977127 | None:intergenic | 30.0% | |
| AGTAGATTATATGAACCACA+CGG | + | chr2.4:1971833-1971852 | None:intergenic | 30.0% | |
| AGTATGTGTAACAGTGAAAT+AGG | - | chr2.4:1976715-1976734 | MS.gene89037:intron | 30.0% | |
| ATACATCTGTTAATGCAGAA+AGG | + | chr2.4:1974085-1974104 | None:intergenic | 30.0% | |
| ATACTACAAACAGATCCTTT+AGG | + | chr2.4:1975111-1975130 | None:intergenic | 30.0% | |
| CAATACATCAAGCAAAAGAA+AGG | + | chr2.4:1977750-1977769 | None:intergenic | 30.0% | |
| CATATTTATGATCTCACAGT+GGG | - | chr2.4:1975337-1975356 | MS.gene89037:CDS | 30.0% | |
| CTACAATCAATTACTCATGA+GGG | + | chr2.4:1974516-1974535 | None:intergenic | 30.0% | |
| GAAATTTACGATCTCACATT+CGG | - | chr2.4:1975509-1975528 | MS.gene89037:CDS | 30.0% | |
| GAAGAAGAAGAAGTTATGAA+CGG | + | chr2.4:1972603-1972622 | None:intergenic | 30.0% | |
| GCATAATCTGTTACAACTTT+CGG | + | chr2.4:1977811-1977830 | None:intergenic | 30.0% | |
| GGTATTATCATCCTTAAATC+CGG | - | chr2.4:1974626-1974645 | MS.gene89037:intron | 30.0% | |
| GTAGTATATTGAATCATCCT+GGG | - | chr2.4:1975124-1975143 | MS.gene89037:intron | 30.0% | |
| GTTCAGAATACTTTGTATCT+TGG | + | chr2.4:1976804-1976823 | None:intergenic | 30.0% | |
| GTTCATCCTAAAATTAGATG+GGG | + | chr2.4:1975226-1975245 | None:intergenic | 30.0% | |
| TAAATGGGGTGAAAATGATT+TGG | + | chr2.4:1975375-1975394 | None:intergenic | 30.0% | |
| TAACATTTGTACTAGGCATT+TGG | - | chr2.4:1974777-1974796 | MS.gene89037:intron | 30.0% | |
| TAAGAAATGCCTAAAACCTT+AGG | - | chr2.4:1977880-1977899 | MS.gene89037:intron | 30.0% | |
| TAAGTTGTTTATCAGAACAG+AGG | + | chr2.4:1972891-1972910 | None:intergenic | 30.0% | |
| TATATTTGTATCCTTGTGAG+TGG | - | chr2.4:1973793-1973812 | MS.gene89037:intron | 30.0% | |
| TATTCTGAACAAGATACACA+TGG | - | chr2.4:1976814-1976833 | MS.gene89037:intron | 30.0% | |
| TCTTCACTCATCAAGTAATT+TGG | - | chr2.4:1976762-1976781 | MS.gene89037:intron | 30.0% | |
| TGAGTGGAAAATGTAATAAG+TGG | - | chr2.4:1973809-1973828 | MS.gene89037:intron | 30.0% | |
| TGGAATAATAAGACTCCTAA+AGG | - | chr2.4:1975093-1975112 | MS.gene89037:intron | 30.0% | |
| TGTAGTATATTGAATCATCC+TGG | - | chr2.4:1975123-1975142 | MS.gene89037:intron | 30.0% | |
| TTAGAATGCTTAAGTGTCTT+CGG | + | chr2.4:1972087-1972106 | None:intergenic | 30.0% | |
| TTCAAATCTTTGAATTCGGT+TGG | + | chr2.4:1971951-1971970 | None:intergenic | 30.0% | |
| TTCTGCATTAACAGATGTAT+TGG | - | chr2.4:1974085-1974104 | MS.gene89037:intron | 30.0% | |
| TTGGGTGAATATTAAAAGTG+AGG | + | chr2.4:1974748-1974767 | None:intergenic | 30.0% | |
| ! | AACACAAAAAGATGTTTTGC+TGG | - | chr2.4:1974605-1974624 | MS.gene89037:intron | 30.0% |
| ! | ACATAGCATTGAAAATTCGA+TGG | + | chr2.4:1972571-1972590 | None:intergenic | 30.0% |
| ! | CTTGATGTATTGCATAGTTT+TGG | - | chr2.4:1977758-1977777 | MS.gene89037:intron | 30.0% |
| ! | GAAGGATTTGCTTAATCAAA+GGG | - | chr2.4:1974863-1974882 | MS.gene89037:intron | 30.0% |
| ! | GGTGTTAAAACATCCATTTT+AGG | - | chr2.4:1974647-1974666 | MS.gene89037:intron | 30.0% |
| ! | TATTACATTTTCCACTCACA+AGG | + | chr2.4:1973807-1973826 | None:intergenic | 30.0% |
| ! | TCCTTGATCTACTATCTTTT+AGG | - | chr2.4:1975613-1975632 | MS.gene89037:intron | 30.0% |
| ! | TGAAGGATTTGCTTAATCAA+AGG | - | chr2.4:1974862-1974881 | MS.gene89037:intron | 30.0% |
| ! | TTTCCAATGGTACTCTAAAA+GGG | - | chr2.4:1976599-1976618 | MS.gene89037:intron | 30.0% |
| ! | TTTTCACCCCATCTAATTTT+AGG | - | chr2.4:1975217-1975236 | MS.gene89037:intron | 30.0% |
| ! | TTTTCCAATGGTACTCTAAA+AGG | - | chr2.4:1976598-1976617 | MS.gene89037:intron | 30.0% |
| !! | AATTTTTGTTTAGAGATCGG+AGG | + | chr2.4:1972125-1972144 | None:intergenic | 30.0% |
| !! | ACACTTTGCTGTAATTTTGT+GGG | - | chr2.4:1977834-1977853 | MS.gene89037:CDS | 30.0% |
| !! | AGCTAAAGTCATTTTCCTTT+TGG | + | chr2.4:1977308-1977327 | None:intergenic | 30.0% |
| !! | ATTTTTGTTTAGAGATCGGA+GGG | + | chr2.4:1972124-1972143 | None:intergenic | 30.0% |
| !! | CATGATTTTTGTTTGAATGG+AGG | + | chr2.4:1976473-1976492 | None:intergenic | 30.0% |
| !! | TGATTTTCATTGTTTTCAGG+TGG | - | chr2.4:1977926-1977945 | MS.gene89037:intron | 30.0% |
| !!! | ATGTTGGTATGTTGTTTTAC+AGG | - | chr2.4:1975693-1975712 | MS.gene89037:intron | 30.0% |
| !!! | ATGTTTTAACACCGGATTTA+AGG | + | chr2.4:1974640-1974659 | None:intergenic | 30.0% |
| !!! | TCGAGTTTTGAGATATTATG+AGG | - | chr2.4:1971590-1971609 | MS.gene89037:intron | 30.0% |
| !!! | TGGGAGTTAGTTTTTTCTAA+GGG | - | chr2.4:1971723-1971742 | MS.gene89037:intron | 30.0% |
| !!! | TGTTGGTATGTTGTTTTACA+GGG | - | chr2.4:1975694-1975713 | MS.gene89037:intron | 30.0% |
| AAGAGACAAAGAGAGAATCT+AGG | - | chr2.4:1975741-1975760 | MS.gene89037:intron | 35.0% | |
| AAGCTTCTTGCAGAATGATA+AGG | + | chr2.4:1974238-1974257 | None:intergenic | 35.0% | |
| AATGATGCCGATCATGAAAA+TGG | - | chr2.4:1976413-1976432 | MS.gene89037:intron | 35.0% | |
| ACAAGATACACATGGTATGA+TGG | - | chr2.4:1976822-1976841 | MS.gene89037:intron | 35.0% | |
| ACAATTGCAATGTCTGTTGT+AGG | - | chr2.4:1973863-1973882 | MS.gene89037:intron | 35.0% | |
| ACATACCAACATGATCAAAC+AGG | + | chr2.4:1975685-1975704 | None:intergenic | 35.0% | |
| ACCCTAACGTCTTAATAGTA+GGG | - | chr2.4:1973130-1973149 | MS.gene89037:intron | 35.0% | |
| ACTGTTGAGATAGATGATGT+TGG | - | chr2.4:1977637-1977656 | MS.gene89037:intron | 35.0% | |
| ACTTTATAGTACGCTTCAGT+AGG | + | chr2.4:1976139-1976158 | None:intergenic | 35.0% | |
| AGAAGGTTATGAACTTGAAG+AGG | - | chr2.4:1976340-1976359 | MS.gene89037:intron | 35.0% | |
| AGAATAGAAAGATCTGACTG+CGG | + | chr2.4:1976980-1976999 | None:intergenic | 35.0% | |
| ATGCCGCGATAAAATTGTAA+AGG | - | chr2.4:1972374-1972393 | MS.gene89037:intron | 35.0% | |
| ATTCAAAGGAGTTAGAGAAG+AGG | - | chr2.4:1973562-1973581 | MS.gene89037:intron | 35.0% | |
| CAAAAGAAAGGGAAGTCATA+AGG | + | chr2.4:1977738-1977757 | None:intergenic | 35.0% | |
| CAAAATTACAGCAAAGTGTG+TGG | + | chr2.4:1977833-1977852 | None:intergenic | 35.0% | |
| CAAATTCCAGTGACATTGTA+AGG | + | chr2.4:1973343-1973362 | None:intergenic | 35.0% | |
| CAAATTGAGATGGAGATAGT+GGG | - | chr2.4:1976067-1976086 | MS.gene89037:CDS | 35.0% | |
| CAAGATTGTGATATCAGGTT+TGG | + | chr2.4:1977908-1977927 | None:intergenic | 35.0% | |
| CATAGCGACTATTAGCTAAA+GGG | + | chr2.4:1973381-1973400 | None:intergenic | 35.0% | |
| CCACTGTGAGATCATAAATA+TGG | + | chr2.4:1975339-1975358 | None:intergenic | 35.0% | |
| CCATATTTATGATCTCACAG+TGG | - | chr2.4:1975336-1975355 | MS.gene89037:CDS | 35.0% | |
| CCTACAATCAATTACTCATG+AGG | + | chr2.4:1974517-1974536 | None:intergenic | 35.0% | |
| CCTCATGAGTAATTGATTGT+AGG | - | chr2.4:1974514-1974533 | MS.gene89037:intron | 35.0% | |
| GACAACTCAACCATTTCTTT+AGG | - | chr2.4:1977495-1977514 | MS.gene89037:intron | 35.0% | |
| GAGAAGAAAAGGACATATTG+AGG | - | chr2.4:1973694-1973713 | MS.gene89037:CDS | 35.0% | |
| GAGGTTCTTATAATAAGCGA+CGG | + | chr2.4:1976454-1976473 | None:intergenic | 35.0% | |
| GCAGAAGTAGAATATGTAGA+AGG | - | chr2.4:1976323-1976342 | MS.gene89037:intron | 35.0% | |
| GGATAGTTGAATATTTCACC+TGG | + | chr2.4:1976118-1976137 | None:intergenic | 35.0% | |
| GGTCTGGTAATATACATTTG+GGG | + | chr2.4:1977107-1977126 | None:intergenic | 35.0% | |
| GTCTGGTAATATACATTTGG+GGG | + | chr2.4:1977106-1977125 | None:intergenic | 35.0% | |
| GTTATCTTGAAGAACTTGTG+AGG | - | chr2.4:1973033-1973052 | MS.gene89037:CDS | 35.0% | |
| TAGAAGCTTTGCAATATGCA+TGG | - | chr2.4:1976673-1976692 | MS.gene89037:intron | 35.0% | |
| TAGAATGCTTAAGTGTCTTC+GGG | + | chr2.4:1972086-1972105 | None:intergenic | 35.0% | |
| TAGATGGGGTGAAAATGATT+TGG | + | chr2.4:1975212-1975231 | None:intergenic | 35.0% | |
| TCAAATAAGCCAATCCAAAG+AGG | - | chr2.4:1973100-1973119 | MS.gene89037:CDS | 35.0% | |
| TCCCTACTATTAAGACGTTA+GGG | + | chr2.4:1973134-1973153 | None:intergenic | 35.0% | |
| TCTGGTAATATACATTTGGG+GGG | + | chr2.4:1977105-1977124 | None:intergenic | 35.0% | |
| TCTGTTAATGCAGAAAGGTA+AGG | + | chr2.4:1974080-1974099 | None:intergenic | 35.0% | |
| TGACATAGAGACCAAAAACA+TGG | + | chr2.4:1973518-1973537 | None:intergenic | 35.0% | |
| TGCCGCGATAAAATTGTAAA+GGG | - | chr2.4:1972375-1972394 | MS.gene89037:intron | 35.0% | |
| TGCTTACGAAAGACAAAGAT+TGG | - | chr2.4:1977959-1977978 | MS.gene89037:intron | 35.0% | |
| TGGAGAGAATGTGAAGTTTA+TGG | - | chr2.4:1973220-1973239 | MS.gene89037:intron | 35.0% | |
| TTCAAAGGAGTTAGAGAAGA+GGG | - | chr2.4:1973563-1973582 | MS.gene89037:intron | 35.0% | |
| TTCTTATAATAAGCGACGGA+GGG | + | chr2.4:1976450-1976469 | None:intergenic | 35.0% | |
| TTGTGGTCAACATACAAAAC+TGG | + | chr2.4:1977707-1977726 | None:intergenic | 35.0% | |
| TTGTGTTCGTAGAATTACGA+CGG | - | chr2.4:1973300-1973319 | MS.gene89037:CDS | 35.0% | |
| TTTGCAATTCATGAGTCACA+GGG | - | chr2.4:1976389-1976408 | MS.gene89037:intron | 35.0% | |
| ! | AATATGTCCTTTTCTTCTCG+TGG | + | chr2.4:1973693-1973712 | None:intergenic | 35.0% |
| ! | AATCATCTGTTTGTTGCATG+TGG | - | chr2.4:1971657-1971676 | MS.gene89037:intron | 35.0% |
| ! | ACCATTTCTTTAGGGAACTT+TGG | - | chr2.4:1977504-1977523 | MS.gene89037:intron | 35.0% |
| ! | AGCCCTTTACAATTTTATCG+CGG | + | chr2.4:1972380-1972399 | None:intergenic | 35.0% |
| ! | ATATGTCCTTTTCTTCTCGT+GGG | + | chr2.4:1973692-1973711 | None:intergenic | 35.0% |
| ! | ATCATCTGTTTGTTGCATGT+GGG | - | chr2.4:1971658-1971677 | MS.gene89037:intron | 35.0% |
| ! | CCATTTCTTTAGGGAACTTT+GGG | - | chr2.4:1977505-1977524 | MS.gene89037:intron | 35.0% |
| ! | GAAGATGACATGGAAGATTT+TGG | - | chr2.4:1976362-1976381 | MS.gene89037:intron | 35.0% |
| ! | TGAAGGAAACTCCATGTTTT+TGG | - | chr2.4:1973504-1973523 | MS.gene89037:intron | 35.0% |
| !! | AACTTGGTAATGTTGACTCT+GGG | - | chr2.4:1976271-1976290 | MS.gene89037:intron | 35.0% |
| !! | CACACTTTGCTGTAATTTTG+TGG | - | chr2.4:1977833-1977852 | MS.gene89037:CDS | 35.0% |
| !! | GGAAACTTGCTTTGAAAACA+AGG | - | chr2.4:1974175-1974194 | MS.gene89037:intron | 35.0% |
| !! | TAACTTGGTAATGTTGACTC+TGG | - | chr2.4:1976270-1976289 | MS.gene89037:intron | 35.0% |
| !!! | CTGGGAGTTAGTTTTTTCTA+AGG | - | chr2.4:1971722-1971741 | MS.gene89037:intron | 35.0% |
| !!! | TAAGGTTTTGAACGGATATG+TGG | + | chr2.4:1971516-1971535 | None:intergenic | 35.0% |
| !!! | TATAGGATTTTGAGATGGTC+TGG | - | chr2.4:1971699-1971718 | MS.gene89037:intron | 35.0% |
| !!! | TATCCCTTTTAGAGTACCAT+TGG | + | chr2.4:1976605-1976624 | None:intergenic | 35.0% |
| !!! | TCTTGTTTAGGGGTATTTTG+TGG | - | chr2.4:1971756-1971775 | MS.gene89037:intron | 35.0% |
| !!! | TGCATAGTTTTGGTTTTGTC+TGG | - | chr2.4:1977768-1977787 | MS.gene89037:intron | 35.0% |
| AAACTGAAGCACGTAATCAG+AGG | - | chr2.4:1977278-1977297 | MS.gene89037:intron | 40.0% | |
| AAAGGGAAGTCATAAGGGAT+TGG | + | chr2.4:1977732-1977751 | None:intergenic | 40.0% | |
| AATATACATTTGGGGGGTAG+AGG | + | chr2.4:1977099-1977118 | None:intergenic | 40.0% | |
| ACATCTAACAAGTGGGAGAA+CGG | + | chr2.4:1974709-1974728 | None:intergenic | 40.0% | |
| ACTACATCAGTACACTGCTT+TGG | + | chr2.4:1975056-1975075 | None:intergenic | 40.0% | |
| ACTCTTTCCCACAAATCCTT+TGG | + | chr2.4:1973932-1973951 | None:intergenic | 40.0% | |
| ACTTGAAGAGGAAGATGACA+TGG | - | chr2.4:1976352-1976371 | MS.gene89037:intron | 40.0% | |
| AGAAACCCTTACAATGTCAC+TGG | - | chr2.4:1973334-1973353 | MS.gene89037:CDS | 40.0% | |
| AGAATCTAGGAGAGAAGCAA+AGG | - | chr2.4:1975754-1975773 | MS.gene89037:intron | 40.0% | |
| AGACAAAAATATGCAGGAGC+AGG | + | chr2.4:1974962-1974981 | None:intergenic | 40.0% | |
| AGTACCTTTGTCTTCACGAA+TGG | + | chr2.4:1973407-1973426 | None:intergenic | 40.0% | |
| AGTGGAGATTCAGACTGATA+AGG | - | chr2.4:1975959-1975978 | MS.gene89037:intron | 40.0% | |
| AGTTGAGCTCAGACATTCAA+AGG | - | chr2.4:1973548-1973567 | MS.gene89037:intron | 40.0% | |
| ATATACATTTGGGGGGTAGA+GGG | + | chr2.4:1977098-1977117 | None:intergenic | 40.0% | |
| ATCTTGTGTACGAGAAGCTT+TGG | + | chr2.4:1974111-1974130 | None:intergenic | 40.0% | |
| ATGTCATGTGTGCTTTATGC+GGG | - | chr2.4:1971616-1971635 | MS.gene89037:intron | 40.0% | |
| CAATTACTCATGAGGGTTTG+AGG | + | chr2.4:1974509-1974528 | None:intergenic | 40.0% | |
| CAGAACAGAGGCTAAATCAA+TGG | + | chr2.4:1972879-1972898 | None:intergenic | 40.0% | |
| CAGCATAAACTCCTTCTTCA+AGG | + | chr2.4:1975917-1975936 | None:intergenic | 40.0% | |
| CCCAAAGTTCCCTAAAGAAA+TGG | + | chr2.4:1977508-1977527 | None:intergenic | 40.0% | |
| CTAACTAAACGCCTTGAAGA+AGG | - | chr2.4:1975903-1975922 | MS.gene89037:intron | 40.0% | |
| CTACATCAGTACACTGCTTT+GGG | + | chr2.4:1975055-1975074 | None:intergenic | 40.0% | |
| GAAATGCTTGTGTGATGTGA+AGG | - | chr2.4:1973487-1973506 | MS.gene89037:intron | 40.0% | |
| GACCCTAACGTCTTAATAGT+AGG | - | chr2.4:1973129-1973148 | MS.gene89037:intron | 40.0% | |
| GATGTCATGTGTGCTTTATG+CGG | - | chr2.4:1971615-1971634 | MS.gene89037:intron | 40.0% | |
| GCAAATTGAGATGGAGATAG+TGG | - | chr2.4:1976066-1976085 | MS.gene89037:CDS | 40.0% | |
| GCATAGCGACTATTAGCTAA+AGG | + | chr2.4:1973382-1973401 | None:intergenic | 40.0% | |
| GTAATCAGAGGAAAGCCAAA+AGG | - | chr2.4:1977290-1977309 | MS.gene89037:intron | 40.0% | |
| GTCCCTACTATTAAGACGTT+AGG | + | chr2.4:1973135-1973154 | None:intergenic | 40.0% | |
| GTCTAATAGCCTCTTTGGAT+TGG | + | chr2.4:1973112-1973131 | None:intergenic | 40.0% | |
| GTCTTATACTTAGGGACAGA+GGG | - | chr2.4:1976643-1976662 | MS.gene89037:intron | 40.0% | |
| GTTCTTATAATAAGCGACGG+AGG | + | chr2.4:1976451-1976470 | None:intergenic | 40.0% | |
| GTTTGCAATTCATGAGTCAC+AGG | - | chr2.4:1976388-1976407 | MS.gene89037:intron | 40.0% | |
| TAACGTGTGTGGGTAACATT+AGG | + | chr2.4:1975996-1976015 | None:intergenic | 40.0% | |
| TCAAAACTCGACATCGTAGA+AGG | + | chr2.4:1971581-1971600 | None:intergenic | 40.0% | |
| TCATACGCCAAAGGATTTGT+GGG | - | chr2.4:1973922-1973941 | MS.gene89037:intron | 40.0% | |
| TCTCTCTTTGTCTCTTTCCT+TGG | + | chr2.4:1975737-1975756 | None:intergenic | 40.0% | |
| TGAACATGAAAAAAGTGGGG+TGG | - | chr2.4:1974468-1974487 | MS.gene89037:intron | 40.0% | |
| TGACTTCTCTTTCATTGAGC+TGG | - | chr2.4:1976859-1976878 | MS.gene89037:intron | 40.0% | |
| TGCATTGGAGAGAGAAATCT+AGG | - | chr2.4:1971779-1971798 | MS.gene89037:intron | 40.0% | |
| TGGTCAACATACAAAACTGG+AGG | + | chr2.4:1977704-1977723 | None:intergenic | 40.0% | |
| TGTGTTCGTAGAATTACGAC+GGG | - | chr2.4:1973301-1973320 | MS.gene89037:CDS | 40.0% | |
| TTAAACGAAAACCTCGCACT+AGG | + | chr2.4:1972435-1972454 | None:intergenic | 40.0% | |
| TTAGGGTCTAATAGCCTCTT+TGG | + | chr2.4:1973117-1973136 | None:intergenic | 40.0% | |
| TTCTCTTTCATTGAGCTGGT+GGG | - | chr2.4:1976863-1976882 | MS.gene89037:intron | 40.0% | |
| TTGACATCTACTAATGCAGC+TGG | - | chr2.4:1977238-1977257 | MS.gene89037:intron | 40.0% | |
| TTGGGAGTTGAGATAGAAAG+AGG | + | chr2.4:1975162-1975181 | None:intergenic | 40.0% | |
| ! | ATGGGGTGAAAATGATTTGG+TGG | + | chr2.4:1975209-1975228 | None:intergenic | 40.0% |
| ! | GATATCAGGTTTGGAACCTA+AGG | + | chr2.4:1977899-1977918 | None:intergenic | 40.0% |
| ! | TCATCTGTTTGTTGCATGTG+GGG | - | chr2.4:1971659-1971678 | MS.gene89037:intron | 40.0% |
| ! | TTGCGTCTAGGGTTTGATAT+AGG | - | chr2.4:1971682-1971701 | MS.gene89037:intron | 40.0% |
| !! | ATGCACTGAGTCTTGTTTAG+GGG | - | chr2.4:1971746-1971765 | MS.gene89037:intron | 40.0% |
| !! | GAGGTGAAAGTTTGGTTCTT+TGG | - | chr2.4:1973662-1973681 | MS.gene89037:intron | 40.0% |
| !! | GATGCACTGAGTCTTGTTTA+GGG | - | chr2.4:1971745-1971764 | MS.gene89037:intron | 40.0% |
| !! | GGTTTGGAACCTAAGGTTTT+AGG | + | chr2.4:1977892-1977911 | None:intergenic | 40.0% |
| !!! | GATCAAACAGGCTGCTTTTA+TGG | + | chr2.4:1975673-1975692 | None:intergenic | 40.0% |
| ACATCGTAGAAGGTTCACTC+TGG | + | chr2.4:1971571-1971590 | None:intergenic | 45.0% | |
| ACCTTTGTCTTCACGAATGG+TGG | + | chr2.4:1973404-1973423 | None:intergenic | 45.0% | |
| AGCAGCCTGTTTGATCATGT+TGG | - | chr2.4:1975677-1975696 | MS.gene89037:intron | 45.0% | |
| AGGAATTACGAACAGGCACT+TGG | - | chr2.4:1973962-1973981 | MS.gene89037:intron | 45.0% | |
| AGTGCCTGTTCGTAATTCCT+AGG | + | chr2.4:1973962-1973981 | None:intergenic | 45.0% | |
| CAAAATGTAGGTTCGCAACC+AGG | - | chr2.4:1976097-1976116 | MS.gene89037:CDS | 45.0% | |
| CGGTGCTTCAGAACTATAAG+CGG | - | chr2.4:1971484-1971503 | MS.gene89037:CDS | 45.0% | |
| CTCATACGCCAAAGGATTTG+TGG | - | chr2.4:1973921-1973940 | MS.gene89037:intron | 45.0% | |
| CTTCTCTTTCATTGAGCTGG+TGG | - | chr2.4:1976862-1976881 | MS.gene89037:intron | 45.0% | |
| GAAAACGAAGGTCCTCATTG+AGG | - | chr2.4:1977369-1977388 | MS.gene89037:intron | 45.0% | |
| GGTGCTTCAGAACTATAAGC+GGG | - | chr2.4:1971485-1971504 | MS.gene89037:CDS | 45.0% | |
| GTGTTCGTAGAATTACGACG+GGG | - | chr2.4:1973302-1973321 | MS.gene89037:CDS | 45.0% | |
| TAGCTAAAGGGCAAGAGCTT+CGG | + | chr2.4:1973369-1973388 | None:intergenic | 45.0% | |
| TATACATTTGGGGGGTAGAG+GGG | + | chr2.4:1977097-1977116 | None:intergenic | 45.0% | |
| TCTTCATCCTCTTCATCAGC+AGG | + | chr2.4:1976184-1976203 | None:intergenic | 45.0% | |
| TGAAAGAGCTCATACGCCAA+AGG | - | chr2.4:1973913-1973932 | MS.gene89037:intron | 45.0% | |
| TGACCAAAATGACCCAGATG+CGG | - | chr2.4:1974142-1974161 | MS.gene89037:intron | 45.0% | |
| TGCAGAAAGCAGCACTCTAA+AGG | + | chr2.4:1977128-1977147 | None:intergenic | 45.0% | |
| TGCAGCACGATGAGGTTATA+TGG | - | chr2.4:1972659-1972678 | MS.gene89037:intron | 45.0% | |
| TGCTGATGAAGAGGATGAAG+AGG | - | chr2.4:1976183-1976202 | MS.gene89037:intron | 45.0% | |
| TGGAGAGAGAAATCTAGGAG+AGG | - | chr2.4:1971784-1971803 | MS.gene89037:intron | 45.0% | |
| TGGAGTCATCGACAAACATC+TGG | - | chr2.4:1973982-1974001 | MS.gene89037:intron | 45.0% | |
| TGTCATGTGTGCTTTATGCG+GGG | - | chr2.4:1971617-1971636 | MS.gene89037:intron | 45.0% | |
| ! | AAAGCAGCACTCTAAAGGTC+TGG | + | chr2.4:1977123-1977142 | None:intergenic | 45.0% |
| ! | AAGAGAAGTGCGTACTGAAG+TGG | - | chr2.4:1975941-1975960 | MS.gene89037:intron | 45.0% |
| ! | AATCCGCATCTGGGTCATTT+TGG | + | chr2.4:1974148-1974167 | None:intergenic | 45.0% |
| ! | ACTCATGAGGGTTTGAGGTT+AGG | + | chr2.4:1974504-1974523 | None:intergenic | 45.0% |
| ! | AGAGGCATGCTTAAAAACCC+AGG | + | chr2.4:1975144-1975163 | None:intergenic | 45.0% |
| ! | CTGGTTGCGAACCTACATTT+TGG | + | chr2.4:1976099-1976118 | None:intergenic | 45.0% |
| ! | GGTCTTATACTTAGGGACAG+AGG | - | chr2.4:1976642-1976661 | MS.gene89037:intron | 45.0% |
| ! | GTTGCGAACCTACATTTTGG+AGG | + | chr2.4:1976096-1976115 | None:intergenic | 45.0% |
| ! | TGCATACTTTTCCTGAGCTG+AGG | - | chr2.4:1973643-1973662 | MS.gene89037:intron | 45.0% |
| !! | GGATGCACTGAGTCTTGTTT+AGG | - | chr2.4:1971744-1971763 | MS.gene89037:intron | 45.0% |
| !! | GTCATAAGGGATTGGCTTTG+TGG | + | chr2.4:1977724-1977743 | None:intergenic | 45.0% |
| !! | TTAGAGTGCTGCTTTCTGCA+TGG | - | chr2.4:1977128-1977147 | MS.gene89037:intron | 45.0% |
| !!! | AGGGGTATTTTGTGGTGCAT+TGG | - | chr2.4:1971764-1971783 | MS.gene89037:intron | 45.0% |
| !!! | GATTTTGAGATGGTCTGGCT+GGG | - | chr2.4:1971704-1971723 | MS.gene89037:intron | 45.0% |
| !! | AAATATAAAATTATTACATA+AGG | + | chr2.4:1973780-1973799 | None:intergenic | 5.0% |
| AACAGCGGCTGCTATAGAGA+AGG | - | chr2.4:1975781-1975800 | MS.gene89037:intron | 50.0% | |
| ACCTCATCGTGCTGCATCTT+TGG | + | chr2.4:1972655-1972674 | None:intergenic | 50.0% | |
| AGGACATATTGAGGCCCTGT+TGG | - | chr2.4:1973703-1973722 | MS.gene89037:CDS | 50.0% | |
| CCAAACTTTCACCTCAGCTC+AGG | + | chr2.4:1973657-1973676 | None:intergenic | 50.0% | |
| CCTCATACGAATCCGCATCT+GGG | + | chr2.4:1974157-1974176 | None:intergenic | 50.0% | |
| CCTGAGCTGAGGTGAAAGTT+TGG | - | chr2.4:1973654-1973673 | MS.gene89037:intron | 50.0% | |
| CTGCTTTCTGCATGGCTAAC+GGG | - | chr2.4:1977136-1977155 | MS.gene89037:intron | 50.0% | |
| GCCACCATTCGTGAAGACAA+AGG | - | chr2.4:1973400-1973419 | MS.gene89037:intron | 50.0% | |
| GCTGCCTAGGAATTACGAAC+AGG | - | chr2.4:1973955-1973974 | MS.gene89037:intron | 50.0% | |
| GCTTCAACCTGCTGATGAAG+AGG | - | chr2.4:1976174-1976193 | MS.gene89037:intron | 50.0% | |
| GGAGAACCCACGAGAAGAAA+AGG | - | chr2.4:1973683-1973702 | MS.gene89037:CDS | 50.0% | |
| GGGAAAGAGTTAAGCTGCCT+AGG | - | chr2.4:1973942-1973961 | MS.gene89037:intron | 50.0% | |
| TACCTGTGGAAGCTGTTCTC+CGG | + | chr2.4:1972510-1972529 | None:intergenic | 50.0% | |
| TCCAAAGATGCAGCACGATG+AGG | - | chr2.4:1972651-1972670 | MS.gene89037:intron | 50.0% | |
| TCCTCATACGAATCCGCATC+TGG | + | chr2.4:1974158-1974177 | None:intergenic | 50.0% | |
| TGATCTAGCATACGACCGTG+TGG | - | chr2.4:1971815-1971834 | MS.gene89037:intron | 50.0% | |
| TGCAGGAGCAGGATAGACTA+TGG | + | chr2.4:1974951-1974970 | None:intergenic | 50.0% | |
| ! | GCAGCTTGTTTCGTTACCTG+TGG | + | chr2.4:1972524-1972543 | None:intergenic | 50.0% |
| ! | GCTGCTTTCTGCATGGCTAA+CGG | - | chr2.4:1977135-1977154 | MS.gene89037:intron | 50.0% |
| !!! | GGATTTTGAGATGGTCTGGC+TGG | - | chr2.4:1971703-1971722 | MS.gene89037:intron | 50.0% |
| CAACCGTGTAGGTGTGACAG+CGG | + | chr2.4:1972487-1972506 | None:intergenic | 55.0% | |
| CATGTGTGCTTTATGCGGGG+AGG | - | chr2.4:1971620-1971639 | MS.gene89037:intron | 55.0% | |
| CCCAGATGCGGATTCGTATG+AGG | - | chr2.4:1974154-1974173 | MS.gene89037:intron | 55.0% | |
| GTGGGACGCCTCCAAAATGT+AGG | - | chr2.4:1976085-1976104 | MS.gene89037:CDS | 55.0% | |
| TGCATGTGGGGTTGCGTCTA+GGG | - | chr2.4:1971671-1971690 | MS.gene89037:intron | 55.0% | |
| TGTCACACCTACACGGTTGC+CGG | - | chr2.4:1972488-1972507 | MS.gene89037:intron | 55.0% | |
| TTGCATGTGGGGTTGCGTCT+AGG | - | chr2.4:1971670-1971689 | MS.gene89037:intron | 55.0% | |
| ! | TCTGCATGGCTAACGGGCAA+TGG | - | chr2.4:1977142-1977161 | MS.gene89037:intron | 55.0% |
| CGACTTCGTGACCTAGTGCG+AGG | - | chr2.4:1972421-1972440 | MS.gene89037:intron | 60.0% | |
| CTGTTCTCCGGCAACCGTGT+AGG | + | chr2.4:1972498-1972517 | None:intergenic | 60.0% | |
| TCGCCGCTGTCACACCTACA+CGG | - | chr2.4:1972481-1972500 | MS.gene89037:intron | 60.0% | |
| TGCCGGAGAACAGCTTCCAC+AGG | - | chr2.4:1972505-1972524 | MS.gene89037:intron | 60.0% | |
| GTGTAGGTGTGACAGCGGCG+AGG | + | chr2.4:1972482-1972501 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 1971478 | 1977989 | 1971478 | ID=MS.gene89037 |
| chr2.4 | mRNA | 1971478 | 1977989 | 1971478 | ID=MS.gene89037.t1;Parent=MS.gene89037 |
| chr2.4 | exon | 1977982 | 1977989 | 1977982 | ID=MS.gene89037.t1.exon1;Parent=MS.gene89037.t1 |
| chr2.4 | CDS | 1977982 | 1977989 | 1977982 | ID=cds.MS.gene89037.t1;Parent=MS.gene89037.t1 |
| chr2.4 | exon | 1977818 | 1977895 | 1977818 | ID=MS.gene89037.t1.exon2;Parent=MS.gene89037.t1 |
| chr2.4 | CDS | 1977818 | 1977895 | 1977818 | ID=cds.MS.gene89037.t1;Parent=MS.gene89037.t1 |
| chr2.4 | exon | 1976941 | 1977030 | 1976941 | ID=MS.gene89037.t1.exon3;Parent=MS.gene89037.t1 |
| chr2.4 | CDS | 1976941 | 1977030 | 1976941 | ID=cds.MS.gene89037.t1;Parent=MS.gene89037.t1 |
| chr2.4 | exon | 1976046 | 1976155 | 1976046 | ID=MS.gene89037.t1.exon4;Parent=MS.gene89037.t1 |
| chr2.4 | CDS | 1976046 | 1976155 | 1976046 | ID=cds.MS.gene89037.t1;Parent=MS.gene89037.t1 |
| chr2.4 | exon | 1975464 | 1975582 | 1975464 | ID=MS.gene89037.t1.exon5;Parent=MS.gene89037.t1 |
| chr2.4 | CDS | 1975464 | 1975582 | 1975464 | ID=cds.MS.gene89037.t1;Parent=MS.gene89037.t1 |
| chr2.4 | exon | 1975271 | 1975368 | 1975271 | ID=MS.gene89037.t1.exon6;Parent=MS.gene89037.t1 |
| chr2.4 | CDS | 1975271 | 1975368 | 1975271 | ID=cds.MS.gene89037.t1;Parent=MS.gene89037.t1 |
| chr2.4 | exon | 1973665 | 1973752 | 1973665 | ID=MS.gene89037.t1.exon7;Parent=MS.gene89037.t1 |
| chr2.4 | CDS | 1973665 | 1973752 | 1973665 | ID=cds.MS.gene89037.t1;Parent=MS.gene89037.t1 |
| chr2.4 | exon | 1973263 | 1973400 | 1973263 | ID=MS.gene89037.t1.exon8;Parent=MS.gene89037.t1 |
| chr2.4 | CDS | 1973263 | 1973400 | 1973263 | ID=cds.MS.gene89037.t1;Parent=MS.gene89037.t1 |
| chr2.4 | exon | 1973033 | 1973147 | 1973033 | ID=MS.gene89037.t1.exon9;Parent=MS.gene89037.t1 |
| chr2.4 | CDS | 1973033 | 1973147 | 1973033 | ID=cds.MS.gene89037.t1;Parent=MS.gene89037.t1 |
| chr2.4 | exon | 1972077 | 1972210 | 1972077 | ID=MS.gene89037.t1.exon10;Parent=MS.gene89037.t1 |
| chr2.4 | CDS | 1972077 | 1972210 | 1972077 | ID=cds.MS.gene89037.t1;Parent=MS.gene89037.t1 |
| chr2.4 | exon | 1971478 | 1971522 | 1971478 | ID=MS.gene89037.t1.exon11;Parent=MS.gene89037.t1 |
| chr2.4 | CDS | 1971478 | 1971522 | 1971478 | ID=cds.MS.gene89037.t1;Parent=MS.gene89037.t1 |
| Gene Sequence |
| Protein sequence |
