Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09845.t1 | XP_003625518.1 | 98.4 | 608 | 10 | 0 | 1 | 608 | 2 | 609 | 0.00E+00 | 1163.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09845.t1 | Q851S7 | 59.6 | 611 | 234 | 6 | 1 | 607 | 1 | 602 | 1.3e-204 | 714.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09845.t1 | G7L0M1 | 98.4 | 608 | 10 | 0 | 1 | 608 | 2 | 609 | 0.0e+00 | 1163.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049411 | MS.gene09845 | 0.812787 | 3.56E-51 | -1.69E-46 |
| MS.gene049499 | MS.gene09845 | 0.815705 | 8.06E-52 | -1.69E-46 |
| MS.gene050945 | MS.gene09845 | 0.837289 | 5.67E-57 | -1.69E-46 |
| MS.gene051234 | MS.gene09845 | 0.830623 | 2.65E-55 | -1.69E-46 |
| MS.gene052072 | MS.gene09845 | 0.838643 | 2.55E-57 | -1.69E-46 |
| MS.gene054142 | MS.gene09845 | 0.800093 | 1.69E-48 | -1.69E-46 |
| MS.gene055765 | MS.gene09845 | 0.814073 | 1.86E-51 | -1.69E-46 |
| MS.gene05689 | MS.gene09845 | 0.810927 | 9.03E-51 | -1.69E-46 |
| MS.gene057102 | MS.gene09845 | 0.831364 | 1.74E-55 | -1.69E-46 |
| MS.gene059146 | MS.gene09845 | 0.831104 | 2.02E-55 | -1.69E-46 |
| MS.gene059227 | MS.gene09845 | 0.803347 | 3.64E-49 | -1.69E-46 |
| MS.gene059778 | MS.gene09845 | 0.825216 | 5.29E-54 | -1.69E-46 |
| MS.gene060763 | MS.gene09845 | 0.823201 | 1.57E-53 | -1.69E-46 |
| MS.gene060933 | MS.gene09845 | 0.815675 | 8.19E-52 | -1.69E-46 |
| MS.gene060937 | MS.gene09845 | 0.809959 | 1.46E-50 | -1.69E-46 |
| MS.gene061100 | MS.gene09845 | 0.822383 | 2.44E-53 | -1.69E-46 |
| MS.gene061160 | MS.gene09845 | 0.821345 | 4.24E-53 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09845.t1 | MTR_7g100040 | 98.355 | 608 | 10 | 0 | 1 | 608 | 2 | 609 | 0.0 | 1239 |
| MS.gene09845.t1 | MTR_7g100040 | 98.283 | 466 | 8 | 0 | 143 | 608 | 22 | 487 | 0.0 | 947 |
| MS.gene09845.t1 | MTR_8g010330 | 69.243 | 608 | 135 | 9 | 1 | 608 | 1 | 556 | 0.0 | 830 |
| MS.gene09845.t1 | MTR_6g022610 | 56.354 | 181 | 36 | 3 | 137 | 317 | 1 | 138 | 2.90e-53 | 179 |
| MS.gene09845.t1 | MTR_6g022610 | 65.556 | 90 | 26 | 2 | 206 | 295 | 1 | 85 | 4.22e-30 | 114 |
| MS.gene09845.t1 | MTR_6g022550 | 60.000 | 80 | 28 | 1 | 38 | 117 | 20 | 95 | 2.68e-23 | 97.8 |
| MS.gene09845.t1 | MTR_6g022550 | 70.455 | 44 | 13 | 0 | 437 | 480 | 87 | 130 | 5.40e-14 | 70.9 |
| MS.gene09845.t1 | MTR_6g022570 | 39.873 | 158 | 50 | 4 | 433 | 587 | 30 | 145 | 6.46e-23 | 95.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09845.t1 | AT5G14520 | 59.835 | 605 | 224 | 4 | 1 | 604 | 1 | 587 | 0.0 | 716 |
Find 123 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCAGCTTGCAAGTGTTTA+AGG | 0.077657 | 7.1:-7340669 | None:intergenic |
| AAGTGGAAGGACTTCCTTTC+TGG | 0.157417 | 7.1:-7340692 | None:intergenic |
| AAAACATTTGTATCTGTTAA+AGG | 0.196641 | 7.1:+7337998 | MS.gene09845:CDS |
| TGTAGAAAGTTTAGCATAGT+AGG | 0.252591 | 7.1:-7338195 | None:intergenic |
| CGATCCTCGCTTGGAGGCCT+TGG | 0.273183 | 7.1:+7338538 | MS.gene09845:CDS |
| GAATTGATGCAGCCTCTTCT+TGG | 0.273854 | 7.1:+7338461 | MS.gene09845:intron |
| ATCCTATCTATCTTGGGTTT+AGG | 0.307336 | 7.1:-7337537 | None:intergenic |
| GCATTGTCAAGATATTTAAA+TGG | 0.311917 | 7.1:+7338670 | MS.gene09845:CDS |
| GGGAGGATACTTCAAATTAA+TGG | 0.317994 | 7.1:-7338510 | None:intergenic |
| AAGGAAGTCCTTCCACTTCC+AGG | 0.320847 | 7.1:+7340697 | MS.gene09845:CDS |
| CATTTCTTCAGATCGTTGAT+AGG | 0.328002 | 7.1:+7339472 | MS.gene09845:intron |
| GGAAGATCCTCAAAATCTTC+TGG | 0.343027 | 7.1:+7340735 | MS.gene09845:CDS |
| TCGTATTCAGGGGAAGAAAA+AGG | 0.346079 | 7.1:+7337137 | MS.gene09845:intron |
| ACGGATTATCCTATCTATCT+TGG | 0.349681 | 7.1:-7337544 | None:intergenic |
| TTTGAAGCTGCTTGAGTGCT+TGG | 0.355501 | 7.1:-7337191 | None:intergenic |
| AAAACATTGAACGTGCAAAT+AGG | 0.364609 | 7.1:+7337499 | MS.gene09845:CDS |
| CGGATTATCCTATCTATCTT+GGG | 0.365112 | 7.1:-7337543 | None:intergenic |
| AGTGCACCTGGTTCATTAGA+AGG | 0.367300 | 7.1:-7338829 | None:intergenic |
| TGTTGATGCACTTGGAGAAT+TGG | 0.369050 | 7.1:+7337584 | MS.gene09845:CDS |
| CGCTTGGAGGCCTTGGCAGC+AGG | 0.371399 | 7.1:+7338545 | MS.gene09845:CDS |
| GGTCTGTGCCCCATCTTGCT+TGG | 0.395071 | 7.1:-7338758 | None:intergenic |
| TTGAAGCTGCTTGAGTGCTT+GGG | 0.401438 | 7.1:-7337190 | None:intergenic |
| ATATATACCTTCGACATTTG+TGG | 0.409570 | 7.1:-7337683 | None:intergenic |
| CCGAGATTTGTTGATGCACT+TGG | 0.410666 | 7.1:+7337576 | MS.gene09845:CDS |
| AGCAGCTTGCAAGTGTTTAA+GGG | 0.412911 | 7.1:-7340668 | None:intergenic |
| CTGCTTGAGTGCTTGGGTCC+TGG | 0.413989 | 7.1:-7337184 | None:intergenic |
| TCAGCAAACGGAACCTGAAA+AGG | 0.419969 | 7.1:-7337224 | None:intergenic |
| GCTTCAGAATTCAGTTTAGC+AGG | 0.421503 | 7.1:-7338703 | None:intergenic |
| GTAGAAAGTTTAGCATAGTA+GGG | 0.424316 | 7.1:-7338194 | None:intergenic |
| TGTTAAAGGCATATACTATC+AGG | 0.426932 | 7.1:+7338012 | MS.gene09845:CDS |
| TGACCAGAGCATTACTCATC+AGG | 0.431073 | 7.1:+7339385 | MS.gene09845:CDS |
| AACTCCTCATTCACTGCAGC+AGG | 0.447090 | 7.1:+7338149 | MS.gene09845:CDS |
| CTCAGAATCAAAGGAGTTGA+AGG | 0.450438 | 7.1:+7341421 | MS.gene09845:CDS |
| TCCCATCCTCGATCCTCGCT+TGG | 0.450758 | 7.1:+7338529 | MS.gene09845:CDS |
| CACCTAAACCCAAGATAGAT+AGG | 0.452146 | 7.1:+7337535 | MS.gene09845:CDS |
| CATCCTCGATCCTCGCTTGG+AGG | 0.453702 | 7.1:+7338532 | MS.gene09845:CDS |
| CCAAGTGCATCAACAAATCT+CGG | 0.453864 | 7.1:-7337576 | None:intergenic |
| AACATGATACTATCATTAAA+CGG | 0.458418 | 7.1:+7341379 | MS.gene09845:CDS |
| AGAATTCAGTTTAGCAGGTC+GGG | 0.461342 | 7.1:-7338698 | None:intergenic |
| TCAAATTAATGGAATGATAG+AGG | 0.462893 | 7.1:-7338499 | None:intergenic |
| GGAGTTGAAGAAAGAACTAA+AGG | 0.466055 | 7.1:+7340936 | MS.gene09845:CDS |
| CTCTGGTCAGATTCTGCAAA+GGG | 0.469526 | 7.1:-7339371 | None:intergenic |
| CTTGCAAGCTGCTGCCAGAA+AGG | 0.471722 | 7.1:+7340678 | MS.gene09845:CDS |
| CAAATAGAGTCCAAGCAAGA+TGG | 0.474285 | 7.1:+7338748 | MS.gene09845:CDS |
| CAGCAAACGGAACCTGAAAA+GGG | 0.476889 | 7.1:-7337223 | None:intergenic |
| GTTCAAGCTAATACTGATGA+TGG | 0.483361 | 7.1:+7341042 | MS.gene09845:CDS |
| CAGTTTCATGGGAGGGAGAA+GGG | 0.489826 | 7.1:+7339345 | MS.gene09845:CDS |
| GGTGAAACATACACTTCAGC+AGG | 0.493983 | 7.1:+7340958 | MS.gene09845:CDS |
| AGAATATGTTCAACCACAAT+GGG | 0.495352 | 7.1:+7339524 | MS.gene09845:CDS |
| ATTTCTTCAGATCGTTGATA+GGG | 0.501272 | 7.1:+7339473 | MS.gene09845:intron |
| TCCTCAAAATCTTCTGGCTG+AGG | 0.507721 | 7.1:+7340741 | MS.gene09845:CDS |
| GAAGCTACTTGAAGCTATGC+AGG | 0.510853 | 7.1:+7341104 | MS.gene09845:CDS |
| TACTGATGATGGCGCTGAGA+TGG | 0.513305 | 7.1:+7341053 | MS.gene09845:CDS |
| ACAGTTTCATGGGAGGGAGA+AGG | 0.517134 | 7.1:+7339344 | MS.gene09845:CDS |
| GTTTGTGCAGGCTGAAGTTG+AGG | 0.517949 | 7.1:+7338107 | MS.gene09845:intron |
| CCTTTCGTTGACTATGACGA+AGG | 0.522226 | 7.1:+7340619 | MS.gene09845:CDS |
| AAAGGCGACAAGTGCGGTGG+AGG | 0.522970 | 7.1:-7340601 | None:intergenic |
| CTCCAAGCGAGGATCGAGGA+TGG | 0.528155 | 7.1:-7338531 | None:intergenic |
| CAGAATTCAGTTTAGCAGGT+CGG | 0.528529 | 7.1:-7338699 | None:intergenic |
| TTTGTGCAGGCTGAAGTTGA+GGG | 0.530560 | 7.1:+7338108 | MS.gene09845:intron |
| GCCTTTGGTTGAAATACATA+GGG | 0.531832 | 7.1:+7337431 | MS.gene09845:CDS |
| GCCCTATGTATTTCAACCAA+AGG | 0.532381 | 7.1:-7337432 | None:intergenic |
| GAGAATATGTTCAACCACAA+TGG | 0.535969 | 7.1:+7339523 | MS.gene09845:CDS |
| AAACTTTCTACAACTCTATG+AGG | 0.536109 | 7.1:+7338206 | MS.gene09845:CDS |
| TGACGAAGGAGCGTATGTTC+CGG | 0.536900 | 7.1:+7340633 | MS.gene09845:CDS |
| GCTGCCAAGGCCTCCAAGCG+AGG | 0.538415 | 7.1:-7338542 | None:intergenic |
| TTAAGGGTCTTTGCATACTC+CGG | 0.541818 | 7.1:-7340652 | None:intergenic |
| AAATAGAGTCCAAGCAAGAT+GGG | 0.543002 | 7.1:+7338749 | MS.gene09845:CDS |
| TCCAAGCGAGGATCGAGGAT+GGG | 0.545604 | 7.1:-7338530 | None:intergenic |
| TAGATGAAGCTCAGAATCAA+AGG | 0.545642 | 7.1:+7341412 | MS.gene09845:CDS |
| CAAAACAGTACCTGCTGCCA+AGG | 0.546500 | 7.1:-7338555 | None:intergenic |
| CAAATCTCGGGTACCTCTGA+CGG | 0.547460 | 7.1:-7337563 | None:intergenic |
| GGTGGTACAGTTTCATGGGA+GGG | 0.549135 | 7.1:+7339338 | MS.gene09845:CDS |
| ACAAGCTGCATTAGTGCACC+TGG | 0.550380 | 7.1:-7338841 | None:intergenic |
| TTTGCTTTCAGTCGCAGGTA+CGG | 0.552774 | 7.1:-7337640 | None:intergenic |
| TGGTGGTACAGTTTCATGGG+AGG | 0.552915 | 7.1:+7339337 | MS.gene09845:CDS |
| GTTCTTTCTTCAACTCCTCA+CGG | 0.554903 | 7.1:-7340930 | None:intergenic |
| ACAACCTGCTGCAGTGAATG+AGG | 0.557462 | 7.1:-7338153 | None:intergenic |
| TTTCAGCACCTGGAAGTGGA+AGG | 0.558041 | 7.1:-7340705 | None:intergenic |
| GTTGAACATATTCTCTTGAG+AGG | 0.562695 | 7.1:-7339515 | None:intergenic |
| CAAGTGCATCAACAAATCTC+GGG | 0.564221 | 7.1:-7337575 | None:intergenic |
| TTTAATTATTCAGGCACCAA+GGG | 0.565988 | 7.1:+7339286 | MS.gene09845:intron |
| AGTTTCATGGGAGGGAGAAG+GGG | 0.566307 | 7.1:+7339346 | MS.gene09845:CDS |
| AAACCTGATGAGTAATGCTC+TGG | 0.568715 | 7.1:-7339388 | None:intergenic |
| GTTCTAGATTGGCGCATGAA+TGG | 0.569979 | 7.1:+7337942 | MS.gene09845:intron |
| GAGTTGAAGAAAGAACTAAA+GGG | 0.578009 | 7.1:+7340937 | MS.gene09845:CDS |
| TTGAACGTGCAAATAGGCTA+CGG | 0.578493 | 7.1:+7337505 | MS.gene09845:CDS |
| GGTCCTGGTGACAAACTTAG+CGG | 0.588935 | 7.1:-7337169 | None:intergenic |
| AGCCTTTGGTTGAAATACAT+AGG | 0.589241 | 7.1:+7337430 | MS.gene09845:CDS |
| CCTCAAAATCTTCTGGCTGA+GGG | 0.590032 | 7.1:+7340742 | MS.gene09845:CDS |
| ACTGATGATGGCGCTGAGAT+GGG | 0.591885 | 7.1:+7341054 | MS.gene09845:CDS |
| AGTTGCAGGCGAAGGTGAAG+AGG | 0.592188 | 7.1:+7338870 | MS.gene09845:CDS |
| CAACTTCCTTCTAATGAACC+AGG | 0.593856 | 7.1:+7338823 | MS.gene09845:CDS |
| ACTGCAGCAGGTTGTGTCTG+AGG | 0.600791 | 7.1:+7338161 | MS.gene09845:CDS |
| GAAACTGTACCACCAAAAGC+AGG | 0.601785 | 7.1:-7339329 | None:intergenic |
| TGAACGTGCAAATAGGCTAC+GGG | 0.608457 | 7.1:+7337506 | MS.gene09845:CDS |
| TTTGAAAGGTGTAACTCCGA+GGG | 0.612090 | 7.1:+7337335 | MS.gene09845:CDS |
| GTTTAATTATTCAGGCACCA+AGG | 0.616940 | 7.1:+7339285 | MS.gene09845:intron |
| CCTTCGTCATAGTCAACGAA+AGG | 0.618931 | 7.1:-7340619 | None:intergenic |
| AAATTGACAAATCCAAGAAG+AGG | 0.622926 | 7.1:-7338473 | None:intergenic |
| AAGCGAGGATCGAGGATGGG+AGG | 0.624521 | 7.1:-7338527 | None:intergenic |
| GCTCTGGTCAGATTCTGCAA+AGG | 0.627546 | 7.1:-7339372 | None:intergenic |
| ACACAGTCAAATACCCATTG+TGG | 0.637820 | 7.1:-7339537 | None:intergenic |
| ACGAAAGGCGACAAGTGCGG+TGG | 0.638472 | 7.1:-7340604 | None:intergenic |
| AGGCCTCCAAGCGAGGATCG+AGG | 0.639249 | 7.1:-7338535 | None:intergenic |
| ATGCCGCTAAGTTTGTCACC+AGG | 0.639817 | 7.1:+7337166 | MS.gene09845:CDS |
| TCTACCGCAGTCATTCAGAC+TGG | 0.643448 | 7.1:+7341003 | MS.gene09845:CDS |
| AGCTTGTCCACAAATGTCGA+AGG | 0.645271 | 7.1:+7337676 | MS.gene09845:CDS |
| ATCGTTGATAGGGAATCTCA+AGG | 0.645647 | 7.1:+7339483 | MS.gene09845:CDS |
| AAAAGCTAATATCTTTGACA+TGG | 0.648919 | 7.1:-7337398 | None:intergenic |
| TATTTGACTGTGTGAATGCA+CGG | 0.649353 | 7.1:+7339547 | MS.gene09845:CDS |
| GTATTTCAACCAAAGGCTCG+TGG | 0.653492 | 7.1:-7337425 | None:intergenic |
| ATTGGATGACTGCCTTACAA+TGG | 0.657253 | 7.1:+7337602 | MS.gene09845:CDS |
| TCGTGCAGCTGCAAATGAAG+CGG | 0.657904 | 7.1:+7340774 | MS.gene09845:CDS |
| TAGATAGGATAATCCGTCAG+AGG | 0.658499 | 7.1:+7337550 | MS.gene09845:CDS |
| TCAACGAAAGGCGACAAGTG+CGG | 0.660001 | 7.1:-7340607 | None:intergenic |
| AATAGAGTCCAAGCAAGATG+GGG | 0.666787 | 7.1:+7338750 | MS.gene09845:CDS |
| GCAGGAGCAGCGATTCCGTG+AGG | 0.667655 | 7.1:+7340915 | MS.gene09845:CDS |
| AGCAAACGGAACCTGAAAAG+GGG | 0.669628 | 7.1:-7337222 | None:intergenic |
| CAAAATCTTCTTGAGCAGAG+AGG | 0.675575 | 7.1:+7338939 | MS.gene09845:CDS |
| TTGAGGGTCAGAAAATAACA+TGG | 0.681160 | 7.1:+7338124 | MS.gene09845:CDS |
| GTGAAACATACACTTCAGCA+GGG | 0.696239 | 7.1:+7340959 | MS.gene09845:CDS |
| TTCACCAGTCTGAATGACTG+CGG | 0.726671 | 7.1:-7341007 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAATTAACATAATCAA+TGG | - | chr7.1:7338050-7338069 | None:intergenic | 10.0% |
| !! | ATATATTACTTAATCCATAT+TGG | + | chr7.1:7341225-7341244 | MS.gene09845:intron | 15.0% |
| !! | ATCGAATATATTTATACAAA+GGG | - | chr7.1:7340105-7340124 | None:intergenic | 15.0% |
| !! | ATGTTTAAGAAATTAGTATA+TGG | - | chr7.1:7338434-7338453 | None:intergenic | 15.0% |
| !! | TAATATGTCATAAAGAATTT+AGG | + | chr7.1:7337731-7337750 | MS.gene09845:intron | 15.0% |
| !! | TGTAATTGAATAACTAAATT+TGG | - | chr7.1:7338403-7338422 | None:intergenic | 15.0% |
| !!! | ATCTTAATTTTTAGAATGAA+GGG | + | chr7.1:7339885-7339904 | MS.gene09845:intron | 15.0% |
| !!! | TATCTTAATTTTTAGAATGA+AGG | + | chr7.1:7339884-7339903 | MS.gene09845:intron | 15.0% |
| !! | AAAACATTTGTATCTGTTAA+AGG | + | chr7.1:7337998-7338017 | MS.gene09845:CDS | 20.0% |
| !! | AAAATTTGATTCTGATATTC+GGG | + | chr7.1:7337286-7337305 | MS.gene09845:intron | 20.0% |
| !! | AACATGATACTATCATTAAA+CGG | + | chr7.1:7341379-7341398 | MS.gene09845:CDS | 20.0% |
| !! | AATATATAGAATAGTGTGAT+TGG | - | chr7.1:7341212-7341231 | None:intergenic | 20.0% |
| !! | AGAAAAATACTACATTATCT+CGG | - | chr7.1:7341287-7341306 | None:intergenic | 20.0% |
| !! | CATCGAATATATTTATACAA+AGG | - | chr7.1:7340106-7340125 | None:intergenic | 20.0% |
| !! | CGCTTAATTTAAATATGATT+TGG | - | chr7.1:7338247-7338266 | None:intergenic | 20.0% |
| !! | CTTGGAATTATATTAACTTT+AGG | + | chr7.1:7337707-7337726 | MS.gene09845:intron | 20.0% |
| !! | GAAAATTTGATTCTGATATT+CGG | + | chr7.1:7337285-7337304 | MS.gene09845:intron | 20.0% |
| !! | GAAACATAAAAATATGTGAA+AGG | - | chr7.1:7336856-7336875 | None:intergenic | 20.0% |
| !! | TAATTAATACTACAATGTCT+TGG | - | chr7.1:7340144-7340163 | None:intergenic | 20.0% |
| !! | TTATATTAGTAACATCTCAT+TGG | + | chr7.1:7337841-7337860 | MS.gene09845:intron | 20.0% |
| !!! | ATAATGTAGTATTTTTCTGT+TGG | + | chr7.1:7341289-7341308 | MS.gene09845:intron | 20.0% |
| !!! | CAATCTTTACTTTGAAAATA+AGG | + | chr7.1:7337765-7337784 | MS.gene09845:intron | 20.0% |
| !!! | GTTTAAACTTGCATTTATTT+TGG | + | chr7.1:7339234-7339253 | MS.gene09845:intron | 20.0% |
| !!! | TACATAGTTTTTTTTTGCTA+AGG | + | chr7.1:7339158-7339177 | MS.gene09845:intron | 20.0% |
| !!! | TAGTTCAGATTTTTCATTTT+GGG | - | chr7.1:7338782-7338801 | None:intergenic | 20.0% |
| !!! | TATTCGGGTTTATAAATTTT+AGG | + | chr7.1:7337301-7337320 | MS.gene09845:intron | 20.0% |
| !!! | TGTTTTATTCGTTTATCTTT+CGG | + | chr7.1:7336887-7336906 | MS.gene09845:intron | 20.0% |
| !!! | TTAGTTCAGATTTTTCATTT+TGG | - | chr7.1:7338783-7338802 | None:intergenic | 20.0% |
| ! | AAAAGCTAATATCTTTGACA+TGG | - | chr7.1:7337401-7337420 | None:intergenic | 25.0% |
| ! | AAAATAGAATTGTCAGCAAA+CGG | - | chr7.1:7337239-7337258 | None:intergenic | 25.0% |
| ! | AACAATGTTGTCAAAGAAAT+GGG | - | chr7.1:7339667-7339686 | None:intergenic | 25.0% |
| ! | AAGTATTATTGCAGCATAAT+AGG | - | chr7.1:7337897-7337916 | None:intergenic | 25.0% |
| ! | AATAGTTGAGCAAACATTAA+AGG | - | chr7.1:7339447-7339466 | None:intergenic | 25.0% |
| ! | AATTGTGAAGAGTTCATATA+TGG | + | chr7.1:7339024-7339043 | MS.gene09845:intron | 25.0% |
| ! | AATTTACACAAACTCTAACT+CGG | - | chr7.1:7338984-7339003 | None:intergenic | 25.0% |
| ! | ATAAATCATATATGAACCTG+AGG | + | chr7.1:7340498-7340517 | MS.gene09845:intron | 25.0% |
| ! | ATTCTTATTAGTTGTGATCT+TGG | + | chr7.1:7339849-7339868 | MS.gene09845:intron | 25.0% |
| ! | ATTGATCAGAAGATAATTTC+AGG | - | chr7.1:7338622-7338641 | None:intergenic | 25.0% |
| ! | GACATTGTAGTATTAATTAG+AGG | + | chr7.1:7340145-7340164 | MS.gene09845:intron | 25.0% |
| ! | GATCTATAATCCTATTACTT+TGG | - | chr7.1:7338308-7338327 | None:intergenic | 25.0% |
| ! | GCATTGTCAAGATATTTAAA+TGG | + | chr7.1:7338670-7338689 | MS.gene09845:CDS | 25.0% |
| ! | GCGCTAATTCATATAAATTA+AGG | - | chr7.1:7336960-7336979 | None:intergenic | 25.0% |
| ! | TAAATCATATATGAACCTGA+GGG | + | chr7.1:7340499-7340518 | MS.gene09845:intron | 25.0% |
| ! | TAACAATGTTGTCAAAGAAA+TGG | - | chr7.1:7339668-7339687 | None:intergenic | 25.0% |
| ! | TCAAATTAATGGAATGATAG+AGG | - | chr7.1:7338502-7338521 | None:intergenic | 25.0% |
| ! | TGAAAGCAAAAAAATTGATG+TGG | + | chr7.1:7337653-7337672 | MS.gene09845:CDS | 25.0% |
| ! | TTTGAAGAAAGAGTAATGAA+CGG | + | chr7.1:7340172-7340191 | MS.gene09845:intron | 25.0% |
| !! | ATTTATTATGTTGTTTGTGC+AGG | + | chr7.1:7338095-7338114 | MS.gene09845:intron | 25.0% |
| !! | GTATAGTAATTCCTTTTCAA+TGG | + | chr7.1:7340873-7340892 | MS.gene09845:intron | 25.0% |
| !! | TTACTTTGAAAATAAGGACT+AGG | + | chr7.1:7337771-7337790 | MS.gene09845:intron | 25.0% |
| !!! | AATTTGTTGCTAATTAACTG+CGG | + | chr7.1:7339981-7340000 | MS.gene09845:intron | 25.0% |
| !!! | CCAACAGAAAATTATTTTGT+GGG | + | chr7.1:7339579-7339598 | MS.gene09845:CDS | 25.0% |
| !!! | CTGTTTTGGTTTAATTATTC+AGG | + | chr7.1:7339277-7339296 | MS.gene09845:intron | 25.0% |
| !!! | GGTTGCACTTTTTTTTAAAA+AGG | - | chr7.1:7337876-7337895 | None:intergenic | 25.0% |
| !!! | TCTTTCGGTATTTTAATTGA+TGG | + | chr7.1:7336902-7336921 | MS.gene09845:intron | 25.0% |
| AAAACATTGAACGTGCAAAT+AGG | + | chr7.1:7337499-7337518 | MS.gene09845:CDS | 30.0% | |
| AAACTTTCTACAACTCTATG+AGG | + | chr7.1:7338206-7338225 | MS.gene09845:CDS | 30.0% | |
| AAATTGACAAATCCAAGAAG+AGG | - | chr7.1:7338476-7338495 | None:intergenic | 30.0% | |
| AACTTCTAATTCGTTTGTGT+TGG | + | chr7.1:7339607-7339626 | MS.gene09845:intron | 30.0% | |
| AAGTAAAGATTGAAGCACAA+AGG | - | chr7.1:7337757-7337776 | None:intergenic | 30.0% | |
| AATTAGCGCAATAAAAAGAG+CGG | + | chr7.1:7336971-7336990 | MS.gene09845:intron | 30.0% | |
| AATTGTGTGTCCTAAATACA+TGG | - | chr7.1:7340218-7340237 | None:intergenic | 30.0% | |
| AGAATATGTTCAACCACAAT+GGG | + | chr7.1:7339524-7339543 | MS.gene09845:CDS | 30.0% | |
| AGATACGATATCAAATCTTC+TGG | + | chr7.1:7340433-7340452 | MS.gene09845:intron | 30.0% | |
| AGGAATCCTAATGATAAAAG+AGG | - | chr7.1:7340584-7340603 | None:intergenic | 30.0% | |
| ATATATACCTTCGACATTTG+TGG | - | chr7.1:7337686-7337705 | None:intergenic | 30.0% | |
| ATTTCTTCAGATCGTTGATA+GGG | + | chr7.1:7339473-7339492 | MS.gene09845:intron | 30.0% | |
| CAAAAAGATGTACCATTGTA+AGG | - | chr7.1:7337617-7337636 | None:intergenic | 30.0% | |
| CACATGTTAAGAAAAGTTGT+TGG | + | chr7.1:7340049-7340068 | MS.gene09845:intron | 30.0% | |
| CATCTATCTCAATTTACTCT+CGG | - | chr7.1:7337007-7337026 | None:intergenic | 30.0% | |
| GAGTTGAAGAAAGAACTAAA+GGG | + | chr7.1:7340937-7340956 | MS.gene09845:CDS | 30.0% | |
| GATAAAAGAGGAATCACATA+CGG | - | chr7.1:7340572-7340591 | None:intergenic | 30.0% | |
| GGTCTTAAATTAGAGTCAAT+GGG | + | chr7.1:7340256-7340275 | MS.gene09845:intron | 30.0% | |
| GTAGAAAGTTTAGCATAGTA+GGG | - | chr7.1:7338197-7338216 | None:intergenic | 30.0% | |
| TCCATATCATCCAAAGTAAT+AGG | + | chr7.1:7338295-7338314 | MS.gene09845:intron | 30.0% | |
| TCCTATTACTTTGGATGATA+TGG | - | chr7.1:7338299-7338318 | None:intergenic | 30.0% | |
| TGTAGAAAGTTTAGCATAGT+AGG | - | chr7.1:7338198-7338217 | None:intergenic | 30.0% | |
| TTAGAATGAAGGGTTCTTAT+TGG | + | chr7.1:7339895-7339914 | MS.gene09845:intron | 30.0% | |
| TTGAAGAAAGAGTAATGAAC+GGG | + | chr7.1:7340173-7340192 | MS.gene09845:intron | 30.0% | |
| TTTAATTATTCAGGCACCAA+GGG | + | chr7.1:7339286-7339305 | MS.gene09845:intron | 30.0% | |
| ! | AGGACACACAATTTTGTAAA+CGG | + | chr7.1:7340225-7340244 | MS.gene09845:intron | 30.0% |
| ! | ATGTCGAAGGTATATATACT+TGG | + | chr7.1:7337689-7337708 | MS.gene09845:intron | 30.0% |
| ! | CCCACAAAATAATTTTCTGT+TGG | - | chr7.1:7339582-7339601 | None:intergenic | 30.0% |
| ! | GGACTAGTGATGTTATAAAT+GGG | + | chr7.1:7339045-7339064 | MS.gene09845:intron | 30.0% |
| ! | GTATTATCTGTGCCTATTTT+AGG | + | chr7.1:7339743-7339762 | MS.gene09845:intron | 30.0% |
| ! | GTGATTCCTCTTTTATCATT+AGG | + | chr7.1:7340575-7340594 | MS.gene09845:intron | 30.0% |
| ! | TGTAATGATTGCATCTGTTT+TGG | + | chr7.1:7339263-7339282 | MS.gene09845:intron | 30.0% |
| ! | TGTTAAAGGCATATACTATC+AGG | + | chr7.1:7338012-7338031 | MS.gene09845:CDS | 30.0% |
| ! | TTCAATGTTTTTCTTTGCCT+CGG | - | chr7.1:7337490-7337509 | None:intergenic | 30.0% |
| !! | AAAGCAGAAGGTATTAAGAA+CGG | + | chr7.1:7340804-7340823 | MS.gene09845:intron | 30.0% |
| !! | AATTTTGTAAACGGTCTTGT+AGG | + | chr7.1:7340234-7340253 | MS.gene09845:intron | 30.0% |
| !! | ATTTTGTAAACGGTCTTGTA+GGG | + | chr7.1:7340235-7340254 | MS.gene09845:intron | 30.0% |
| !! | CAATAAAAAGAGCGGATTAA+CGG | + | chr7.1:7336979-7336998 | MS.gene09845:intron | 30.0% |
| !! | CAGAAAATTATTTTGTGGGA+AGG | + | chr7.1:7339583-7339602 | MS.gene09845:CDS | 30.0% |
| !! | GCCAACAGAAAATTATTTTG+TGG | + | chr7.1:7339578-7339597 | MS.gene09845:CDS | 30.0% |
| !! | TGGACTAGTGATGTTATAAA+TGG | + | chr7.1:7339044-7339063 | MS.gene09845:intron | 30.0% |
| !! | TTAACATGTGTGCTTTTTGT+TGG | - | chr7.1:7340039-7340058 | None:intergenic | 30.0% |
| !! | TTTCCCTTGAACTTTTTCTT+CGG | - | chr7.1:7337363-7337382 | None:intergenic | 30.0% |
| !!! | AAAGCATTTTTGGTTTCGTT+AGG | + | chr7.1:7339826-7339845 | MS.gene09845:intron | 30.0% |
| !!! | CTTTTTGTTATTCCTGCTTT+TGG | + | chr7.1:7339317-7339336 | MS.gene09845:CDS | 30.0% |
| AAATAGAGTCCAAGCAAGAT+GGG | + | chr7.1:7338749-7338768 | MS.gene09845:CDS | 35.0% | |
| AAGGCGAATTCATATCCTTA+GGG | - | chr7.1:7336941-7336960 | None:intergenic | 35.0% | |
| ACAAAAAGCAATGATTCCCT+TGG | - | chr7.1:7339305-7339324 | None:intergenic | 35.0% | |
| ACGGGTCTATAAATTTGTAG+AGG | + | chr7.1:7340191-7340210 | MS.gene09845:intron | 35.0% | |
| ACTGCATAGATAATTAGGGA+CGG | + | chr7.1:7340339-7340358 | MS.gene09845:intron | 35.0% | |
| AGCCTTTGGTTGAAATACAT+AGG | + | chr7.1:7337430-7337449 | MS.gene09845:CDS | 35.0% | |
| AGGATTGTTAAATGAGTGGA+GGG | + | chr7.1:7340833-7340852 | MS.gene09845:intron | 35.0% | |
| ATCCTATCTATCTTGGGTTT+AGG | - | chr7.1:7337540-7337559 | None:intergenic | 35.0% | |
| CATCAGGATTGTTAAATGAG+TGG | + | chr7.1:7340829-7340848 | MS.gene09845:intron | 35.0% | |
| CATTTCTTCAGATCGTTGAT+AGG | + | chr7.1:7339472-7339491 | MS.gene09845:intron | 35.0% | |
| CCCAACTGCATAGATAATTA+GGG | + | chr7.1:7340335-7340354 | MS.gene09845:intron | 35.0% | |
| CCCTAATTATCTATGCAGTT+GGG | - | chr7.1:7340338-7340357 | None:intergenic | 35.0% | |
| CCTAATTATCTATGCAGTTG+GGG | - | chr7.1:7340337-7340356 | None:intergenic | 35.0% | |
| CGGATTATCCTATCTATCTT+GGG | - | chr7.1:7337546-7337565 | None:intergenic | 35.0% | |
| CGGGTCTATAAATTTGTAGA+GGG | + | chr7.1:7340192-7340211 | MS.gene09845:intron | 35.0% | |
| CTAACTCGGTAAATGCTATA+AGG | - | chr7.1:7338970-7338989 | None:intergenic | 35.0% | |
| GAGAAAAATTAAGAAAGCCG+AGG | + | chr7.1:7337470-7337489 | MS.gene09845:CDS | 35.0% | |
| GAGAATATGTTCAACCACAA+TGG | + | chr7.1:7339523-7339542 | MS.gene09845:CDS | 35.0% | |
| GAGGTTCCAATAATAAGGAA+CGG | - | chr7.1:7340017-7340036 | None:intergenic | 35.0% | |
| GCCTTTGGTTGAAATACATA+GGG | + | chr7.1:7337431-7337450 | MS.gene09845:CDS | 35.0% | |
| GGAGTTGAAGAAAGAACTAA+AGG | + | chr7.1:7340936-7340955 | MS.gene09845:CDS | 35.0% | |
| GGGAGGATACTTCAAATTAA+TGG | - | chr7.1:7338513-7338532 | None:intergenic | 35.0% | |
| GGGTCTTAAATTAGAGTCAA+TGG | + | chr7.1:7340255-7340274 | MS.gene09845:intron | 35.0% | |
| GTTCAAGCTAATACTGATGA+TGG | + | chr7.1:7341042-7341061 | MS.gene09845:CDS | 35.0% | |
| GTTGAACATATTCTCTTGAG+AGG | - | chr7.1:7339518-7339537 | None:intergenic | 35.0% | |
| GTTTAATTATTCAGGCACCA+AGG | + | chr7.1:7339285-7339304 | MS.gene09845:intron | 35.0% | |
| TAAGGCGAATTCATATCCTT+AGG | - | chr7.1:7336942-7336961 | None:intergenic | 35.0% | |
| TAGATGAAGCTCAGAATCAA+AGG | + | chr7.1:7341412-7341431 | MS.gene09845:CDS | 35.0% | |
| TATTTGACTGTGTGAATGCA+CGG | + | chr7.1:7339547-7339566 | MS.gene09845:CDS | 35.0% | |
| TCAGAACAAATAAGAACCCT+AGG | - | chr7.1:7339773-7339792 | None:intergenic | 35.0% | |
| TCCCTAATTATCTATGCAGT+TGG | - | chr7.1:7340339-7340358 | None:intergenic | 35.0% | |
| TGTTGGAGGTTCCAATAATA+AGG | - | chr7.1:7340022-7340041 | None:intergenic | 35.0% | |
| TTCCAATAATAAGGAACGGA+GGG | - | chr7.1:7340013-7340032 | None:intergenic | 35.0% | |
| TTGAGGGTCAGAAAATAACA+TGG | + | chr7.1:7338124-7338143 | MS.gene09845:CDS | 35.0% | |
| TTTGTTCGTGTGTGAACATT+TGG | + | chr7.1:7337037-7337056 | MS.gene09845:intron | 35.0% | |
| ! | AAATCAGTTTACCCCTTTTC+AGG | + | chr7.1:7337211-7337230 | MS.gene09845:CDS | 35.0% |
| ! | ACGGATTATCCTATCTATCT+TGG | - | chr7.1:7337547-7337566 | None:intergenic | 35.0% |
| ! | AGGAAACTGTGCATTTTGAA+AGG | + | chr7.1:7337321-7337340 | MS.gene09845:intron | 35.0% |
| ! | GCAATTCAAGTTTACAAAGC+TGG | - | chr7.1:7338592-7338611 | None:intergenic | 35.0% |
| !! | TTTTGGTGGTACAGTTTCAT+GGG | + | chr7.1:7339334-7339353 | MS.gene09845:CDS | 35.0% |
| !! | TTTTGTTGTCACGTAGAAAG+AGG | + | chr7.1:7341082-7341101 | MS.gene09845:CDS | 35.0% |
| !!! | ATTTTTTTGCTTTCAGTCGC+AGG | - | chr7.1:7337648-7337667 | None:intergenic | 35.0% |
| !!! | TGGTCTGAGAAAAGCATTTT+TGG | + | chr7.1:7339816-7339835 | MS.gene09845:intron | 35.0% |
| !!! | TTTGTTATTCCTGCTTTTGG+TGG | + | chr7.1:7339320-7339339 | MS.gene09845:CDS | 35.0% |
| AAACCTGATGAGTAATGCTC+TGG | - | chr7.1:7339391-7339410 | None:intergenic | 40.0% | |
| AATAGAGTCCAAGCAAGATG+GGG | + | chr7.1:7338750-7338769 | MS.gene09845:CDS | 40.0% | |
| AATCTCTCTGTCGTATTCAG+GGG | + | chr7.1:7337127-7337146 | MS.gene09845:intron | 40.0% | |
| ACACAGTCAAATACCCATTG+TGG | - | chr7.1:7339540-7339559 | None:intergenic | 40.0% | |
| ACCCTAGGTGAACCTAAAAT+AGG | - | chr7.1:7339758-7339777 | None:intergenic | 40.0% | |
| AGAATTCAGTTTAGCAGGTC+GGG | - | chr7.1:7338701-7338720 | None:intergenic | 40.0% | |
| AGCAGCTTGCAAGTGTTTAA+GGG | - | chr7.1:7340671-7340690 | None:intergenic | 40.0% | |
| AGGCGAATTCATATCCTTAG+GGG | - | chr7.1:7336940-7336959 | None:intergenic | 40.0% | |
| ATAGATAATTAGGGACGGAG+GGG | + | chr7.1:7340344-7340363 | MS.gene09845:intron | 40.0% | |
| ATTCAGGGGAAGAAAAAGGA+AGG | + | chr7.1:7337141-7337160 | MS.gene09845:intron | 40.0% | |
| ATTGGATGACTGCCTTACAA+TGG | + | chr7.1:7337602-7337621 | MS.gene09845:CDS | 40.0% | |
| CAAAATCTTCTTGAGCAGAG+AGG | + | chr7.1:7338939-7338958 | MS.gene09845:CDS | 40.0% | |
| CAAATAGAGTCCAAGCAAGA+TGG | + | chr7.1:7338748-7338767 | MS.gene09845:CDS | 40.0% | |
| CAACAGCAATAACCGAAGAA+CGG | - | chr7.1:7339724-7339743 | None:intergenic | 40.0% | |
| CAACTTCCTTCTAATGAACC+AGG | + | chr7.1:7338823-7338842 | MS.gene09845:CDS | 40.0% | |
| CAAGTGCATCAACAAATCTC+GGG | - | chr7.1:7337578-7337597 | None:intergenic | 40.0% | |
| CACCTAAACCCAAGATAGAT+AGG | + | chr7.1:7337535-7337554 | MS.gene09845:CDS | 40.0% | |
| CAGAATTCAGTTTAGCAGGT+CGG | - | chr7.1:7338702-7338721 | None:intergenic | 40.0% | |
| CAGGATTGTTAAATGAGTGG+AGG | + | chr7.1:7340832-7340851 | MS.gene09845:intron | 40.0% | |
| CATAGATAATTAGGGACGGA+GGG | + | chr7.1:7340343-7340362 | MS.gene09845:intron | 40.0% | |
| CCAAGTGCATCAACAAATCT+CGG | - | chr7.1:7337579-7337598 | None:intergenic | 40.0% | |
| CCCCAACTGCATAGATAATT+AGG | + | chr7.1:7340334-7340353 | MS.gene09845:intron | 40.0% | |
| CTGCAAAACAGCCATTGAAA+AGG | - | chr7.1:7340887-7340906 | None:intergenic | 40.0% | |
| GAAGAGATGAGAAGAACTCA+CGG | - | chr7.1:7336821-7336840 | None:intergenic | 40.0% | |
| GAATCTCTCTGTCGTATTCA+GGG | + | chr7.1:7337126-7337145 | MS.gene09845:intron | 40.0% | |
| GAGCCGAAGAAAAAGTTCAA+GGG | + | chr7.1:7337357-7337376 | MS.gene09845:CDS | 40.0% | |
| GCCCTATGTATTTCAACCAA+AGG | - | chr7.1:7337435-7337454 | None:intergenic | 40.0% | |
| GCTTCAGAATTCAGTTTAGC+AGG | - | chr7.1:7338706-7338725 | None:intergenic | 40.0% | |
| GGAAGATCCTCAAAATCTTC+TGG | + | chr7.1:7340735-7340754 | MS.gene09845:CDS | 40.0% | |
| GGAGTAACTCTTATCTGTCA+TGG | + | chr7.1:7340277-7340296 | MS.gene09845:intron | 40.0% | |
| GTGAAACATACACTTCAGCA+GGG | + | chr7.1:7340959-7340978 | MS.gene09845:CDS | 40.0% | |
| GTTCCAATAATAAGGAACGG+AGG | - | chr7.1:7340014-7340033 | None:intergenic | 40.0% | |
| GTTCTTTCTTCAACTCCTCA+CGG | - | chr7.1:7340933-7340952 | None:intergenic | 40.0% | |
| TAGATAGGATAATCCGTCAG+AGG | + | chr7.1:7337550-7337569 | MS.gene09845:CDS | 40.0% | |
| TCATCAGTTAGTCGTGATCT+TGG | + | chr7.1:7339927-7339946 | MS.gene09845:intron | 40.0% | |
| TCGTATTCAGGGGAAGAAAA+AGG | + | chr7.1:7337137-7337156 | MS.gene09845:intron | 40.0% | |
| TGTTGATGCACTTGGAGAAT+TGG | + | chr7.1:7337584-7337603 | MS.gene09845:CDS | 40.0% | |
| TTAAGGGTCTTTGCATACTC+CGG | - | chr7.1:7340655-7340674 | None:intergenic | 40.0% | |
| TTCTTCTTATCTGTTCCCTC+AGG | - | chr7.1:7340517-7340536 | None:intergenic | 40.0% | |
| TTGAACGTGCAAATAGGCTA+CGG | + | chr7.1:7337505-7337524 | MS.gene09845:CDS | 40.0% | |
| TTGTAGAGGGCCATGTATTT+AGG | + | chr7.1:7340205-7340224 | MS.gene09845:intron | 40.0% | |
| ! | AATCCATATTGGTTGCCAAG+TGG | + | chr7.1:7341236-7341255 | MS.gene09845:intron | 40.0% |
| ! | ATCGTTGATAGGGAATCTCA+AGG | + | chr7.1:7339483-7339502 | MS.gene09845:CDS | 40.0% |
| ! | TCATCAGCATGTGCTTCTTT+TGG | + | chr7.1:7339796-7339815 | MS.gene09845:intron | 40.0% |
| ! | TTTGAAAGGTGTAACTCCGA+GGG | + | chr7.1:7337335-7337354 | MS.gene09845:CDS | 40.0% |
| !! | ACATGTGTGCTTTTTGTTGG+AGG | - | chr7.1:7340036-7340055 | None:intergenic | 40.0% |
| !! | CAGCTTGTTGAAAAAGTTGC+AGG | + | chr7.1:7338856-7338875 | MS.gene09845:CDS | 40.0% |
| !! | CTTTTGGTGGTACAGTTTCA+TGG | + | chr7.1:7339333-7339352 | MS.gene09845:CDS | 40.0% |
| !! | GGATGCACAAGAACTTGTTT+TGG | - | chr7.1:7339703-7339722 | None:intergenic | 40.0% |
| !! | TTTTGAAAGGTGTAACTCCG+AGG | + | chr7.1:7337334-7337353 | MS.gene09845:CDS | 40.0% |
| !!! | GCCTATTTTAGGTTCACCTA+GGG | + | chr7.1:7339754-7339773 | MS.gene09845:intron | 40.0% |
| !!! | GGTAGTGATTTTTTCCCCTA+AGG | + | chr7.1:7336923-7336942 | MS.gene09845:intron | 40.0% |
| !!! | TGCCTATTTTAGGTTCACCT+AGG | + | chr7.1:7339753-7339772 | MS.gene09845:intron | 40.0% |
| AAGTGGAAGGACTTCCTTTC+TGG | - | chr7.1:7340695-7340714 | None:intergenic | 45.0% | |
| AGCAAACGGAACCTGAAAAG+GGG | - | chr7.1:7337225-7337244 | None:intergenic | 45.0% | |
| AGCTTGTCCACAAATGTCGA+AGG | + | chr7.1:7337676-7337695 | MS.gene09845:CDS | 45.0% | |
| AGTGCACCTGGTTCATTAGA+AGG | - | chr7.1:7338832-7338851 | None:intergenic | 45.0% | |
| CAGCAAACGGAACCTGAAAA+GGG | - | chr7.1:7337226-7337245 | None:intergenic | 45.0% | |
| CAGCAGCTTGCAAGTGTTTA+AGG | - | chr7.1:7340672-7340691 | None:intergenic | 45.0% | |
| CCTTCGTCATAGTCAACGAA+AGG | - | chr7.1:7340622-7340641 | None:intergenic | 45.0% | |
| CGAATCTCTCTGTCGTATTC+AGG | + | chr7.1:7337125-7337144 | MS.gene09845:intron | 45.0% | |
| CTCCCTCCGTTCCTTATTAT+TGG | + | chr7.1:7340008-7340027 | MS.gene09845:intron | 45.0% | |
| CTCTGGTCAGATTCTGCAAA+GGG | - | chr7.1:7339374-7339393 | None:intergenic | 45.0% | |
| GAAACTGTACCACCAAAAGC+AGG | - | chr7.1:7339332-7339351 | None:intergenic | 45.0% | |
| GAAGCTACTTGAAGCTATGC+AGG | + | chr7.1:7341104-7341123 | MS.gene09845:CDS | 45.0% | |
| GAATTGATGCAGCCTCTTCT+TGG | + | chr7.1:7338461-7338480 | MS.gene09845:intron | 45.0% | |
| GCATAGATAATTAGGGACGG+AGG | + | chr7.1:7340342-7340361 | MS.gene09845:intron | 45.0% | |
| GGAGCCGAAGAAAAAGTTCA+AGG | + | chr7.1:7337356-7337375 | MS.gene09845:CDS | 45.0% | |
| GGTATTAAGAACGGTGCATC+AGG | + | chr7.1:7340813-7340832 | MS.gene09845:intron | 45.0% | |
| GGTGAAACATACACTTCAGC+AGG | + | chr7.1:7340958-7340977 | MS.gene09845:CDS | 45.0% | |
| GTATTTCAACCAAAGGCTCG+TGG | - | chr7.1:7337428-7337447 | None:intergenic | 45.0% | |
| GTTCTTGTGCATCCGTTCTT+CGG | + | chr7.1:7339709-7339728 | MS.gene09845:intron | 45.0% | |
| GTTGAAAAAGTTGCAGGCGA+AGG | + | chr7.1:7338862-7338881 | MS.gene09845:CDS | 45.0% | |
| TAGATAATTAGGGACGGAGG+GGG | + | chr7.1:7340345-7340364 | MS.gene09845:intron | 45.0% | |
| TCAGCAAACGGAACCTGAAA+AGG | - | chr7.1:7337227-7337246 | None:intergenic | 45.0% | |
| TGAACGTGCAAATAGGCTAC+GGG | + | chr7.1:7337506-7337525 | MS.gene09845:CDS | 45.0% | |
| TTCACCAGTCTGAATGACTG+CGG | - | chr7.1:7341010-7341029 | None:intergenic | 45.0% | |
| TTGAAGCTGCTTGAGTGCTT+GGG | - | chr7.1:7337193-7337212 | None:intergenic | 45.0% | |
| TTTGCTTTCAGTCGCAGGTA+CGG | - | chr7.1:7337643-7337662 | None:intergenic | 45.0% | |
| TTTGTGCAGGCTGAAGTTGA+GGG | + | chr7.1:7338108-7338127 | MS.gene09845:intron | 45.0% | |
| ! | CCTCAAAATCTTCTGGCTGA+GGG | + | chr7.1:7340742-7340761 | MS.gene09845:CDS | 45.0% |
| ! | CCTTTCGTTGACTATGACGA+AGG | + | chr7.1:7340619-7340638 | MS.gene09845:CDS | 45.0% |
| ! | CTTTTTACACCACGAGCCTT+TGG | + | chr7.1:7337416-7337435 | MS.gene09845:CDS | 45.0% |
| ! | GTTCTAGATTGGCGCATGAA+TGG | + | chr7.1:7337942-7337961 | MS.gene09845:intron | 45.0% |
| ! | TCCTCAAAATCTTCTGGCTG+AGG | + | chr7.1:7340741-7340760 | MS.gene09845:CDS | 45.0% |
| ! | TGACCAGAGCATTACTCATC+AGG | + | chr7.1:7339385-7339404 | MS.gene09845:CDS | 45.0% |
| ! | TGTCTGCCTGTGTTCTAGAT+TGG | + | chr7.1:7337931-7337950 | MS.gene09845:intron | 45.0% |
| ! | TGTTTTGCAGCTGATGAAGC+AGG | + | chr7.1:7340897-7340916 | MS.gene09845:intron | 45.0% |
| ! | TTTGAAGCTGCTTGAGTGCT+TGG | - | chr7.1:7337194-7337213 | None:intergenic | 45.0% |
| !! | AACTTTTTCTTCGGCTCCCT+CGG | - | chr7.1:7337354-7337373 | None:intergenic | 45.0% |
| !! | CCGAGATTTGTTGATGCACT+TGG | + | chr7.1:7337576-7337595 | MS.gene09845:CDS | 45.0% |
| !! | TCCAGGTGCTGAAAAAGATC+TGG | + | chr7.1:7340714-7340733 | MS.gene09845:CDS | 45.0% |
| !!! | TCCAGATCTTTTTCAGCACC+TGG | - | chr7.1:7340718-7340737 | None:intergenic | 45.0% |
| !!! | TCTTTTTCAGCACCTGGAAG+TGG | - | chr7.1:7340712-7340731 | None:intergenic | 45.0% |
| AACTCCTCATTCACTGCAGC+AGG | + | chr7.1:7338149-7338168 | MS.gene09845:CDS | 50.0% | |
| AAGGAAGTCCTTCCACTTCC+AGG | + | chr7.1:7340697-7340716 | MS.gene09845:CDS | 50.0% | |
| ACAACCTGCTGCAGTGAATG+AGG | - | chr7.1:7338156-7338175 | None:intergenic | 50.0% | |
| ACAAGCTGCATTAGTGCACC+TGG | - | chr7.1:7338844-7338863 | None:intergenic | 50.0% | |
| ACAGTTTCATGGGAGGGAGA+AGG | + | chr7.1:7339344-7339363 | MS.gene09845:CDS | 50.0% | |
| ACGGAGGGGGTAACTCTTAT+CGG | + | chr7.1:7340358-7340377 | MS.gene09845:intron | 50.0% | |
| AGATGAGAAGAACTCACGGC+GGG | - | chr7.1:7336817-7336836 | None:intergenic | 50.0% | |
| AGTTTCATGGGAGGGAGAAG+GGG | + | chr7.1:7339346-7339365 | MS.gene09845:CDS | 50.0% | |
| ATGCCGCTAAGTTTGTCACC+AGG | + | chr7.1:7337166-7337185 | MS.gene09845:CDS | 50.0% | |
| CAAAACAGTACCTGCTGCCA+AGG | - | chr7.1:7338558-7338577 | None:intergenic | 50.0% | |
| CAAATCTCGGGTACCTCTGA+CGG | - | chr7.1:7337566-7337585 | None:intergenic | 50.0% | |
| CAGTTTCATGGGAGGGAGAA+GGG | + | chr7.1:7339345-7339364 | MS.gene09845:CDS | 50.0% | |
| GAGATGAGAAGAACTCACGG+CGG | - | chr7.1:7336818-7336837 | None:intergenic | 50.0% | |
| GCTCTGGTCAGATTCTGCAA+AGG | - | chr7.1:7339375-7339394 | None:intergenic | 50.0% | |
| GGTCCTGGTGACAAACTTAG+CGG | - | chr7.1:7337172-7337191 | None:intergenic | 50.0% | |
| GGTGGTACAGTTTCATGGGA+GGG | + | chr7.1:7339338-7339357 | MS.gene09845:CDS | 50.0% | |
| GTTTGTGCAGGCTGAAGTTG+AGG | + | chr7.1:7338107-7338126 | MS.gene09845:intron | 50.0% | |
| TACCAGACAAACCTGCCACT+TGG | - | chr7.1:7341254-7341273 | None:intergenic | 50.0% | |
| TCAACGAAAGGCGACAAGTG+CGG | - | chr7.1:7340610-7340629 | None:intergenic | 50.0% | |
| TCTACCGCAGTCATTCAGAC+TGG | + | chr7.1:7341003-7341022 | MS.gene09845:CDS | 50.0% | |
| TGGTGGTACAGTTTCATGGG+AGG | + | chr7.1:7339337-7339356 | MS.gene09845:CDS | 50.0% | |
| TTTCAGCACCTGGAAGTGGA+AGG | - | chr7.1:7340708-7340727 | None:intergenic | 50.0% | |
| ! | CATATTGGTTGCCAAGTGGC+AGG | + | chr7.1:7341240-7341259 | MS.gene09845:intron | 50.0% |
| ! | CATGCGCCAATCTAGAACAC+AGG | - | chr7.1:7337940-7337959 | None:intergenic | 50.0% |
| ! | CCCTCAGCCAGAAGATTTTG+AGG | - | chr7.1:7340745-7340764 | None:intergenic | 50.0% |
| ! | CTGCCACTTGGCAACCAATA+TGG | - | chr7.1:7341242-7341261 | None:intergenic | 50.0% |
| ! | TGACGAAGGAGCGTATGTTC+CGG | + | chr7.1:7340633-7340652 | MS.gene09845:CDS | 50.0% |
| !! | ACTGATGATGGCGCTGAGAT+GGG | + | chr7.1:7341054-7341073 | MS.gene09845:CDS | 50.0% |
| !! | TACTGATGATGGCGCTGAGA+TGG | + | chr7.1:7341053-7341072 | MS.gene09845:CDS | 50.0% |
| ACTGCAGCAGGTTGTGTCTG+AGG | + | chr7.1:7338161-7338180 | MS.gene09845:CDS | 55.0% | |
| AGTTGCAGGCGAAGGTGAAG+AGG | + | chr7.1:7338870-7338889 | MS.gene09845:CDS | 55.0% | |
| CTTGCAAGCTGCTGCCAGAA+AGG | + | chr7.1:7340678-7340697 | MS.gene09845:CDS | 55.0% | |
| TCCAAGCGAGGATCGAGGAT+GGG | - | chr7.1:7338533-7338552 | None:intergenic | 55.0% | |
| TGCCAAGTGGCAGGTTTGTC+TGG | + | chr7.1:7341249-7341268 | MS.gene09845:intron | 55.0% | |
| AAAGGCGACAAGTGCGGTGG+AGG | - | chr7.1:7340604-7340623 | None:intergenic | 60.0% | |
| AAGCGAGGATCGAGGATGGG+AGG | - | chr7.1:7338530-7338549 | None:intergenic | 60.0% | |
| ACGAAAGGCGACAAGTGCGG+TGG | - | chr7.1:7340607-7340626 | None:intergenic | 60.0% | |
| CATCCTCGATCCTCGCTTGG+AGG | + | chr7.1:7338532-7338551 | MS.gene09845:CDS | 60.0% | |
| CTCCAAGCGAGGATCGAGGA+TGG | - | chr7.1:7338534-7338553 | None:intergenic | 60.0% | |
| CTGCTTGAGTGCTTGGGTCC+TGG | - | chr7.1:7337187-7337206 | None:intergenic | 60.0% | |
| GGTCTGTGCCCCATCTTGCT+TGG | - | chr7.1:7338761-7338780 | None:intergenic | 60.0% | |
| TCCCATCCTCGATCCTCGCT+TGG | + | chr7.1:7338529-7338548 | MS.gene09845:CDS | 60.0% | |
| AGGCCTCCAAGCGAGGATCG+AGG | - | chr7.1:7338538-7338557 | None:intergenic | 65.0% | |
| CGATCCTCGCTTGGAGGCCT+TGG | + | chr7.1:7338538-7338557 | MS.gene09845:CDS | 65.0% | |
| GCAGGAGCAGCGATTCCGTG+AGG | + | chr7.1:7340915-7340934 | MS.gene09845:CDS | 65.0% | |
| CGCTTGGAGGCCTTGGCAGC+AGG | + | chr7.1:7338545-7338564 | MS.gene09845:CDS | 70.0% | |
| GCTGCCAAGGCCTCCAAGCG+AGG | - | chr7.1:7338545-7338564 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 7336796 | 7341440 | 7336796 | ID=MS.gene09845 |
| chr7.1 | mRNA | 7336796 | 7341440 | 7336796 | ID=MS.gene09845.t1;Parent=MS.gene09845 |
| chr7.1 | exon | 7336796 | 7336819 | 7336796 | ID=MS.gene09845.t1.exon1;Parent=MS.gene09845.t1 |
| chr7.1 | CDS | 7336796 | 7336819 | 7336796 | ID=cds.MS.gene09845.t1;Parent=MS.gene09845.t1 |
| chr7.1 | exon | 7337147 | 7337232 | 7337147 | ID=MS.gene09845.t1.exon2;Parent=MS.gene09845.t1 |
| chr7.1 | CDS | 7337147 | 7337232 | 7337147 | ID=cds.MS.gene09845.t1;Parent=MS.gene09845.t1 |
| chr7.1 | exon | 7337323 | 7337697 | 7337323 | ID=MS.gene09845.t1.exon3;Parent=MS.gene09845.t1 |
| chr7.1 | CDS | 7337323 | 7337697 | 7337323 | ID=cds.MS.gene09845.t1;Parent=MS.gene09845.t1 |
| chr7.1 | exon | 7337949 | 7338033 | 7337949 | ID=MS.gene09845.t1.exon4;Parent=MS.gene09845.t1 |
| chr7.1 | CDS | 7337949 | 7338033 | 7337949 | ID=cds.MS.gene09845.t1;Parent=MS.gene09845.t1 |
| chr7.1 | exon | 7338117 | 7338227 | 7338117 | ID=MS.gene09845.t1.exon5;Parent=MS.gene09845.t1 |
| chr7.1 | CDS | 7338117 | 7338227 | 7338117 | ID=cds.MS.gene09845.t1;Parent=MS.gene09845.t1 |
| chr7.1 | exon | 7338473 | 7338566 | 7338473 | ID=MS.gene09845.t1.exon6;Parent=MS.gene09845.t1 |
| chr7.1 | CDS | 7338473 | 7338566 | 7338473 | ID=cds.MS.gene09845.t1;Parent=MS.gene09845.t1 |
| chr7.1 | exon | 7338662 | 7338960 | 7338662 | ID=MS.gene09845.t1.exon7;Parent=MS.gene09845.t1 |
| chr7.1 | CDS | 7338662 | 7338960 | 7338662 | ID=cds.MS.gene09845.t1;Parent=MS.gene09845.t1 |
| chr7.1 | exon | 7339299 | 7339406 | 7339299 | ID=MS.gene09845.t1.exon8;Parent=MS.gene09845.t1 |
| chr7.1 | CDS | 7339299 | 7339406 | 7339299 | ID=cds.MS.gene09845.t1;Parent=MS.gene09845.t1 |
| chr7.1 | exon | 7339483 | 7339604 | 7339483 | ID=MS.gene09845.t1.exon9;Parent=MS.gene09845.t1 |
| chr7.1 | CDS | 7339483 | 7339604 | 7339483 | ID=cds.MS.gene09845.t1;Parent=MS.gene09845.t1 |
| chr7.1 | exon | 7340597 | 7340813 | 7340597 | ID=MS.gene09845.t1.exon10;Parent=MS.gene09845.t1 |
| chr7.1 | CDS | 7340597 | 7340813 | 7340597 | ID=cds.MS.gene09845.t1;Parent=MS.gene09845.t1 |
| chr7.1 | exon | 7340907 | 7341125 | 7340907 | ID=MS.gene09845.t1.exon11;Parent=MS.gene09845.t1 |
| chr7.1 | CDS | 7340907 | 7341125 | 7340907 | ID=cds.MS.gene09845.t1;Parent=MS.gene09845.t1 |
| chr7.1 | exon | 7341354 | 7341440 | 7341354 | ID=MS.gene09845.t1.exon12;Parent=MS.gene09845.t1 |
| chr7.1 | CDS | 7341354 | 7341440 | 7341354 | ID=cds.MS.gene09845.t1;Parent=MS.gene09845.t1 |
| Gene Sequence |
| Protein sequence |
