Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52150.t1 | XP_024638686.1 | 99.3 | 307 | 2 | 0 | 1 | 307 | 1 | 307 | 4.20E-166 | 594 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52150.t1 | Q9ASU7 | 76.1 | 293 | 64 | 1 | 13 | 305 | 17 | 303 | 2.5e-122 | 439.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52150.t1 | A0A396IA18 | 99.3 | 307 | 2 | 0 | 1 | 307 | 1 | 307 | 3.1e-166 | 594.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52150.t1 | MTR_4g075050 | 86.039 | 308 | 2 | 1 | 1 | 308 | 1 | 267 | 0.0 | 518 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52150.t1 | AT5G61770 | 76.109 | 293 | 64 | 1 | 13 | 305 | 17 | 303 | 5.06e-164 | 461 |
| MS.gene52150.t1 | AT5G61770 | 76.109 | 293 | 64 | 1 | 13 | 305 | 17 | 303 | 5.06e-164 | 461 |
| MS.gene52150.t1 | AT5G61770 | 76.109 | 293 | 64 | 1 | 13 | 305 | 17 | 303 | 6.49e-164 | 460 |
Find 52 sgRNAs with CRISPR-Local
Find 347 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGTCCTCTTCGACGAATT+TGG | 0.262207 | 4.1:-29143326 | MS.gene52150:CDS |
| TTATTCTTCTTGATAATAAC+AGG | 0.299950 | 4.1:+29147594 | None:intergenic |
| GGTATCTTCTTTCCAGTAAT+GGG | 0.301868 | 4.1:+29147540 | None:intergenic |
| AAACAGAGGAAGAATCAAAA+AGG | 0.315897 | 4.1:-29147627 | MS.gene52150:intron |
| AACAGCTTCAGATGGATCTT+AGG | 0.328276 | 4.1:-29147473 | MS.gene52150:CDS |
| CCAAGTATTGATCCCATTAC+TGG | 0.333545 | 4.1:-29147552 | MS.gene52150:CDS |
| AGAGACTTTCTGAATGTTGC+TGG | 0.344183 | 4.1:-29146159 | MS.gene52150:CDS |
| GCCATCAGGTTCCTGATCTA+AGG | 0.349153 | 4.1:-29145201 | MS.gene52150:CDS |
| TCAATACTTGGCTGTGCCTC+TGG | 0.374452 | 4.1:+29147564 | None:intergenic |
| CCAGTAATGGGATCAATACT+TGG | 0.378796 | 4.1:+29147552 | None:intergenic |
| GGATGACTCTTCAACTAGTT+AGG | 0.382251 | 4.1:-29143373 | MS.gene52150:CDS |
| TGGTATCTTCTTTCCAGTAA+TGG | 0.384814 | 4.1:+29147539 | None:intergenic |
| GTGACTTTGTCTAGTAATCT+TGG | 0.386926 | 4.1:-29143452 | MS.gene52150:CDS |
| TCTGAATGTTGCTGGACCTA+TGG | 0.387257 | 4.1:-29146151 | MS.gene52150:CDS |
| ATTCGCTTTGAAACACCTAT+AGG | 0.388518 | 4.1:+29145241 | None:intergenic |
| TTGAGACTGAGAGCAGTATA+AGG | 0.391440 | 4.1:+29147438 | None:intergenic |
| TGATTTGTAAGGGCTGGTTA+TGG | 0.404504 | 4.1:-29143509 | MS.gene52150:intron |
| AATTAAGCAACACAATCCTT+TGG | 0.413513 | 4.1:+29145317 | None:intergenic |
| TCAACTAGTTAGGATTGAAA+AGG | 0.417113 | 4.1:-29143363 | MS.gene52150:CDS |
| TCAATTAGATTACAACCTAT+AGG | 0.417293 | 4.1:-29145256 | MS.gene52150:CDS |
| TGAAGCTGTTTAAGAGGAAC+AGG | 0.419611 | 4.1:+29147486 | None:intergenic |
| TCCATCTGAAGCTGTTTAAG+AGG | 0.421158 | 4.1:+29147480 | None:intergenic |
| ATTGAAAAGGGACTGTGTTC+TGG | 0.428516 | 4.1:-29143350 | MS.gene52150:CDS |
| CTGAATGTTGCTGGACCTAT+GGG | 0.440731 | 4.1:-29146150 | MS.gene52150:CDS |
| TAAAACTTCACCTTACTTGA+GGG | 0.447002 | 4.1:-29146097 | MS.gene52150:CDS |
| TCTTGAAGATTCCTTAGATC+AGG | 0.447271 | 4.1:+29145190 | None:intergenic |
| AAAACTTGTTCAAAGCCATC+AGG | 0.457141 | 4.1:-29145215 | MS.gene52150:CDS |
| GCTGTCAGGCTTCAAGAGAT+TGG | 0.477339 | 4.1:-29143401 | MS.gene52150:CDS |
| CTAAAACTTCACCTTACTTG+AGG | 0.478099 | 4.1:-29146098 | MS.gene52150:CDS |
| ATGTAAGAGTAGGTCCTTGT+GGG | 0.499307 | 4.1:+29146064 | None:intergenic |
| ACTAGTTGAAGAGTCATCCT+TGG | 0.508593 | 4.1:+29143377 | None:intergenic |
| CAACTAGTTAGGATTGAAAA+GGG | 0.515799 | 4.1:-29143362 | MS.gene52150:CDS |
| TCCTCTTAAACAGCTTCAGA+TGG | 0.521916 | 4.1:-29147481 | MS.gene52150:CDS |
| GTAGTTGCAACCCTCAAGTA+AGG | 0.522894 | 4.1:+29146087 | None:intergenic |
| TTATACTGCTCTCAGTCTCA+AGG | 0.554961 | 4.1:-29147436 | MS.gene52150:intron |
| TCAGTGGTGATTTACCTCTA+CGG | 0.556377 | 4.1:-29145491 | MS.gene52150:CDS |
| TAAGATACAAGAATATGCAT+TGG | 0.557295 | 4.1:-29146040 | MS.gene52150:CDS |
| AGGAAATGTGTGACACCCAT+AGG | 0.559784 | 4.1:+29146135 | None:intergenic |
| TTAAACTCTCGTCTTGCCAA+AGG | 0.560394 | 4.1:-29145333 | MS.gene52150:CDS |
| GTGCTTTCTGGATTTGTCAG+TGG | 0.563201 | 4.1:-29145507 | MS.gene52150:CDS |
| ACAAGGATATGCGATCAGAA+AGG | 0.565990 | 4.1:+29142909 | None:intergenic |
| TGTATCTTAAATGTAAGAGT+AGG | 0.571303 | 4.1:+29146054 | None:intergenic |
| TCCTTAGATCAGGAACCTGA+TGG | 0.582298 | 4.1:+29145200 | None:intergenic |
| AGAAAGCGAAGCAGATGATG+AGG | 0.583910 | 4.1:-29143483 | MS.gene52150:CDS |
| ATGTTCGTTGTAAGCCGTAG+AGG | 0.589274 | 4.1:+29145477 | None:intergenic |
| ATGTACCAAATTCGTCGAAG+AGG | 0.628027 | 4.1:+29143321 | None:intergenic |
| AATGTAAGAGTAGGTCCTTG+TGG | 0.629934 | 4.1:+29146063 | None:intergenic |
| GGCTTCAAGAGATTGGTCCA+AGG | 0.648790 | 4.1:-29143394 | MS.gene52150:CDS |
| GAAGAATAATAAGCAACCAG+AGG | 0.664474 | 4.1:-29147580 | MS.gene52150:CDS |
| AGGGTTGCAACTACCCCACA+AGG | 0.673136 | 4.1:-29146078 | MS.gene52150:CDS |
| AAAAGATCTTTAGGGCATCG+AGG | 0.675531 | 4.1:+29145988 | None:intergenic |
| TGTAAGAGTAGGTCCTTGTG+GGG | 0.701027 | 4.1:+29146065 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATATATTTAATTAAGTTTA+AGG | - | chr4.1:29147581-29147600 | MS.gene52150:CDS | 10.0% |
| !! | TAATAATAAAAATTGTGATA+AGG | + | chr4.1:29146882-29146901 | None:intergenic | 10.0% |
| !! | TGTAAAAATAAATAAAATTG+TGG | + | chr4.1:29142947-29142966 | None:intergenic | 10.0% |
| !!! | AATTTTTAAAAAGATCTTTA+GGG | + | chr4.1:29145442-29145461 | None:intergenic | 10.0% |
| !!! | ATGTTTTAAAAATAATAATG+TGG | - | chr4.1:29143023-29143042 | MS.gene52150:intron | 10.0% |
| !!! | ATTTTAATTAAACATATGTT+TGG | + | chr4.1:29147660-29147679 | None:intergenic | 10.0% |
| !!! | TGAAATTTTAAAATAATTTG+AGG | + | chr4.1:29146852-29146871 | None:intergenic | 10.0% |
| !!! | TTATCACAATTTTTATTATT+AGG | - | chr4.1:29146881-29146900 | MS.gene52150:intron | 10.0% |
| !! | CATCACAATAAAATAATTAT+TGG | + | chr4.1:29143085-29143104 | None:intergenic | 15.0% |
| !! | TAAAAGGATGATAAAAATAA+TGG | + | chr4.1:29147230-29147249 | None:intergenic | 15.0% |
| !! | TTGATGTGATAAAATTTAAT+AGG | + | chr4.1:29145661-29145680 | None:intergenic | 15.0% |
| !! | TTGTAGATAAAACAATTAAA+AGG | + | chr4.1:29147246-29147265 | None:intergenic | 15.0% |
| !!! | AAGTTTTGATATTTTTTTGT+TGG | + | chr4.1:29143716-29143735 | None:intergenic | 15.0% |
| !!! | AGTTTTGATATTTTTTTGTT+GGG | + | chr4.1:29143715-29143734 | None:intergenic | 15.0% |
| !!! | ATATTTTTTGTTCCAATAAA+TGG | + | chr4.1:29143190-29143209 | None:intergenic | 15.0% |
| !!! | GAATTTTTAAAAAGATCTTT+AGG | + | chr4.1:29145443-29145462 | None:intergenic | 15.0% |
| !!! | TATTAATTTTTGTTAGATGA+TGG | - | chr4.1:29146995-29147014 | MS.gene52150:intron | 15.0% |
| !! | AAAATGAAAGCTTATGTAAA+TGG | + | chr4.1:29146289-29146308 | None:intergenic | 20.0% |
| !! | AAATATCTTATGGAATTAGA+TGG | - | chr4.1:29147448-29147467 | MS.gene52150:CDS | 20.0% |
| !! | AAATGAAAGCTTATGTAAAT+GGG | + | chr4.1:29146288-29146307 | None:intergenic | 20.0% |
| !! | AAATGAAGTAAAATTACTTG+AGG | + | chr4.1:29148139-29148158 | None:intergenic | 20.0% |
| !! | AAGTTACAACCAAAAAAAAA+AGG | + | chr4.1:29146478-29146497 | None:intergenic | 20.0% |
| !! | AATAAAATTGTGGCATATAT+TGG | + | chr4.1:29142937-29142956 | None:intergenic | 20.0% |
| !! | AATGATAAACTAGAATAAGA+AGG | + | chr4.1:29147315-29147334 | None:intergenic | 20.0% |
| !! | AGAAAAAAGTTAATAGTCAT+TGG | + | chr4.1:29148323-29148342 | None:intergenic | 20.0% |
| !! | CTAAGAAGAATTTATGAAAA+GGG | + | chr4.1:29144196-29144215 | None:intergenic | 20.0% |
| !! | CTTAAATTGAGAGAATTTAT+TGG | - | chr4.1:29145002-29145021 | MS.gene52150:intron | 20.0% |
| !! | GCTAAAAATAAGATTTGATA+TGG | + | chr4.1:29143050-29143069 | None:intergenic | 20.0% |
| !! | TAAGAAATTAGGAAAAATGA+AGG | + | chr4.1:29144986-29145005 | None:intergenic | 20.0% |
| !! | TACTTTATGAAGAATAACAT+GGG | + | chr4.1:29146375-29146394 | None:intergenic | 20.0% |
| !! | TATAAACTAATCCAAAACTA+GGG | + | chr4.1:29144762-29144781 | None:intergenic | 20.0% |
| !! | TATTCAAATCTTAAACTCTA+TGG | + | chr4.1:29145063-29145082 | None:intergenic | 20.0% |
| !! | TATTGGCAAACTAATTAAAT+GGG | - | chr4.1:29145019-29145038 | MS.gene52150:intron | 20.0% |
| !! | TCTAGTGATACTATTTAAAT+GGG | - | chr4.1:29145758-29145777 | MS.gene52150:intron | 20.0% |
| !! | TTAAATAAGTCAATTGAAAC+AGG | - | chr4.1:29144472-29144491 | MS.gene52150:intron | 20.0% |
| !! | TTACTTTATGAAGAATAACA+TGG | + | chr4.1:29146376-29146395 | None:intergenic | 20.0% |
| !! | TTATAAACTAATCCAAAACT+AGG | + | chr4.1:29144763-29144782 | None:intergenic | 20.0% |
| !! | TTATTGGCAAACTAATTAAA+TGG | - | chr4.1:29145018-29145037 | MS.gene52150:intron | 20.0% |
| !! | TTCTAGTGATACTATTTAAA+TGG | - | chr4.1:29145757-29145776 | MS.gene52150:intron | 20.0% |
| !! | TTCTCTCAATTTAAGAAATT+AGG | + | chr4.1:29144997-29145016 | None:intergenic | 20.0% |
| !! | TTGTTTGCATTATTATCAAT+TGG | - | chr4.1:29146557-29146576 | MS.gene52150:intron | 20.0% |
| !!! | AAAAGTTTTGTTTTTTCAAG+AGG | - | chr4.1:29143903-29143922 | MS.gene52150:intron | 20.0% |
| !!! | AAAATTTTACACATATATGC+CGG | + | chr4.1:29148211-29148230 | None:intergenic | 20.0% |
| !!! | AAAGTTTTGTTTTTTCAAGA+GGG | - | chr4.1:29143904-29143923 | MS.gene52150:intron | 20.0% |
| !!! | ATTGATAATAATGCAAACAA+TGG | + | chr4.1:29146557-29146576 | None:intergenic | 20.0% |
| !!! | ATTTGTTTGGTTCAATTTTT+AGG | - | chr4.1:29146700-29146719 | MS.gene52150:intron | 20.0% |
| !!! | CTTGAAAAAACAAAACTTTT+TGG | + | chr4.1:29143903-29143922 | None:intergenic | 20.0% |
| !!! | TAGAGTTTAAGATTTGAATA+CGG | - | chr4.1:29145063-29145082 | MS.gene52150:intron | 20.0% |
| !!! | TCTTTTTAAAAATTCTGCAT+TGG | - | chr4.1:29145448-29145467 | MS.gene52150:CDS | 20.0% |
| !!! | TTATTCTTCTTGATAATAAC+AGG | + | chr4.1:29143828-29143847 | None:intergenic | 20.0% |
| !!! | TTTTAGTTTTTGACAATATG+AGG | + | chr4.1:29145307-29145326 | None:intergenic | 20.0% |
| ! | AAGGAAGATATATTTGCTTA+AGG | - | chr4.1:29146614-29146633 | MS.gene52150:intron | 25.0% |
| ! | AGATCATAATTCATACATAG+TGG | + | chr4.1:29145836-29145855 | None:intergenic | 25.0% |
| ! | AGCTGATAATAACACAAAAA+TGG | + | chr4.1:29145716-29145735 | None:intergenic | 25.0% |
| ! | AGGAAGATATATTTGCTTAA+GGG | - | chr4.1:29146615-29146634 | MS.gene52150:intron | 25.0% |
| ! | ATGGATGAATAATTAGATGA+TGG | - | chr4.1:29147014-29147033 | MS.gene52150:intron | 25.0% |
| ! | ATTAATAAGCAATACTCACA+TGG | + | chr4.1:29146982-29147001 | None:intergenic | 25.0% |
| ! | ATTAGATGGATAATCAAGAT+CGG | - | chr4.1:29147462-29147481 | MS.gene52150:CDS | 25.0% |
| ! | ATTAGTTAAGACTGCTAAAT+GGG | - | chr4.1:29145632-29145651 | MS.gene52150:intron | 25.0% |
| ! | CAATTGTTGGAAAAATATTC+TGG | + | chr4.1:29145971-29145990 | None:intergenic | 25.0% |
| ! | CTAATAACGTGAAAAACTAA+TGG | + | chr4.1:29147090-29147109 | None:intergenic | 25.0% |
| ! | CTAGTGATACTATTTAAATG+GGG | - | chr4.1:29145759-29145778 | MS.gene52150:intron | 25.0% |
| ! | CTGTATTAAATCTAACTCAT+AGG | - | chr4.1:29144574-29144593 | MS.gene52150:intron | 25.0% |
| ! | GAAGAACAACAAACATAAAA+AGG | + | chr4.1:29144019-29144038 | None:intergenic | 25.0% |
| ! | GCTAAGAAGAATTTATGAAA+AGG | + | chr4.1:29144197-29144216 | None:intergenic | 25.0% |
| ! | TAAGATACAAGAATATGCAT+TGG | - | chr4.1:29145379-29145398 | MS.gene52150:intron | 25.0% |
| ! | TATATCTTCCTTTCTAAATC+AGG | + | chr4.1:29146606-29146625 | None:intergenic | 25.0% |
| ! | TATTAAATCTAACTCATAGG+TGG | - | chr4.1:29144577-29144596 | MS.gene52150:intron | 25.0% |
| ! | TCAATTAGATTACAACCTAT+AGG | - | chr4.1:29146163-29146182 | MS.gene52150:CDS | 25.0% |
| ! | TGTATCTTAAATGTAAGAGT+AGG | + | chr4.1:29145368-29145387 | None:intergenic | 25.0% |
| ! | TTGCATTATTATCAATTGGT+AGG | - | chr4.1:29146561-29146580 | MS.gene52150:intron | 25.0% |
| ! | TTGTTTGAAGATGAATGTAT+CGG | + | chr4.1:29143571-29143590 | None:intergenic | 25.0% |
| ! | TTTCATTCACAACAAAAACA+TGG | + | chr4.1:29143775-29143794 | None:intergenic | 25.0% |
| ! | TTTGCACAAATGTTCAAAAA+TGG | + | chr4.1:29148241-29148260 | None:intergenic | 25.0% |
| !! | AGTTGTTGCATTTTATTATG+TGG | - | chr4.1:29147389-29147408 | MS.gene52150:intron | 25.0% |
| !! | ATTACTTGAGGAAAAAGTAT+AGG | + | chr4.1:29148127-29148146 | None:intergenic | 25.0% |
| !! | GAAATATTTGAAGTATCAAC+GGG | + | chr4.1:29143471-29143490 | None:intergenic | 25.0% |
| !! | GGAAATATTTGAAGTATCAA+CGG | + | chr4.1:29143472-29143491 | None:intergenic | 25.0% |
| !! | TAAAAAAGAAGCATAAGCAA+TGG | + | chr4.1:29147866-29147885 | None:intergenic | 25.0% |
| !! | TAACGAACTTTTGTAAAACA+AGG | - | chr4.1:29144631-29144650 | MS.gene52150:intron | 25.0% |
| !! | TAGTTCTGTATTCCATTTAT+TGG | - | chr4.1:29143175-29143194 | MS.gene52150:intron | 25.0% |
| !! | TTTTGTAAAACAAGGTTGTT+CGG | - | chr4.1:29144639-29144658 | MS.gene52150:intron | 25.0% |
| !!! | AAAGTTCTAAAGTAACAAAG+TGG | + | chr4.1:29143647-29143666 | None:intergenic | 25.0% |
| !!! | GTTCATCATCCTTTTTTTTT+TGG | - | chr4.1:29146466-29146485 | MS.gene52150:intron | 25.0% |
| !!! | TTTTCACTTGTGATTTGTAA+GGG | - | chr4.1:29147900-29147919 | MS.gene52150:intron | 25.0% |
| !!! | TTTTTCACTTGTGATTTGTA+AGG | - | chr4.1:29147899-29147918 | MS.gene52150:intron | 25.0% |
| AAACAGAGGAAGAATCAAAA+AGG | - | chr4.1:29143792-29143811 | MS.gene52150:intron | 30.0% | |
| AAACTTCACTCTTATCTTTC+TGG | - | chr4.1:29148470-29148489 | MS.gene52150:intron | 30.0% | |
| AAATGAGATATGGCTATGTT+TGG | - | chr4.1:29144251-29144270 | MS.gene52150:intron | 30.0% | |
| AAATGGGTAAGTATCTTACT+TGG | + | chr4.1:29146272-29146291 | None:intergenic | 30.0% | |
| AACAGAGGAAGAATCAAAAA+GGG | - | chr4.1:29143793-29143812 | MS.gene52150:intron | 30.0% | |
| AAGCAATAAATGAGCATATG+AGG | + | chr4.1:29146756-29146775 | None:intergenic | 30.0% | |
| AAGCATCACTAACATAACAA+CGG | + | chr4.1:29147122-29147141 | None:intergenic | 30.0% | |
| AATATCAGCCTGATTTAGAA+AGG | - | chr4.1:29146595-29146614 | MS.gene52150:intron | 30.0% | |
| AATTAAGCAACACAATCCTT+TGG | + | chr4.1:29146105-29146124 | None:intergenic | 30.0% | |
| ACCAAAAAACTCCAATTTGA+TGG | + | chr4.1:29146780-29146799 | None:intergenic | 30.0% | |
| ACGAAATAATACACATCGAT+TGG | + | chr4.1:29148411-29148430 | None:intergenic | 30.0% | |
| AGAACTTTCGATTATTGAAC+TGG | - | chr4.1:29143659-29143678 | MS.gene52150:intron | 30.0% | |
| AGATCATTGATCATCATCAT+GGG | + | chr4.1:29147277-29147296 | None:intergenic | 30.0% | |
| AGATTATCAACAGAGAGATT+TGG | + | chr4.1:29143548-29143567 | None:intergenic | 30.0% | |
| AGCAATAAATGAGCATATGA+GGG | + | chr4.1:29146755-29146774 | None:intergenic | 30.0% | |
| AGGGACAATCAATCTAAATA+AGG | + | chr4.1:29144726-29144745 | None:intergenic | 30.0% | |
| ATAAGCTGAAAACAACTTAC+AGG | - | chr4.1:29144159-29144178 | MS.gene52150:intron | 30.0% | |
| CAACTAGTTAGGATTGAAAA+GGG | - | chr4.1:29148057-29148076 | MS.gene52150:intron | 30.0% | |
| CATTAGTTAAGACTGCTAAA+TGG | - | chr4.1:29145631-29145650 | MS.gene52150:intron | 30.0% | |
| CCAAAAAACTCCAATTTGAT+GGG | + | chr4.1:29146779-29146798 | None:intergenic | 30.0% | |
| CTTATTTCAACATACATGAG+AGG | - | chr4.1:29144873-29144892 | MS.gene52150:intron | 30.0% | |
| GAACTTTCGATTATTGAACT+GGG | - | chr4.1:29143660-29143679 | MS.gene52150:intron | 30.0% | |
| GACAATGAAATGTTATGTTG+TGG | - | chr4.1:29144527-29144546 | MS.gene52150:intron | 30.0% | |
| GATTGCATGCTAAAACTTTA+GGG | + | chr4.1:29147745-29147764 | None:intergenic | 30.0% | |
| GGAAAATTGCTATCAATAGA+TGG | - | chr4.1:29147483-29147502 | MS.gene52150:CDS | 30.0% | |
| GTTTAACCTGAAATATACTG+CGG | + | chr4.1:29146072-29146091 | None:intergenic | 30.0% | |
| GTTTACTTCTGAATGACTTT+GGG | + | chr4.1:29147816-29147835 | None:intergenic | 30.0% | |
| TAAAACTTCACCTTACTTGA+GGG | - | chr4.1:29145322-29145341 | MS.gene52150:CDS | 30.0% | |
| TCAACTAGTTAGGATTGAAA+AGG | - | chr4.1:29148056-29148075 | MS.gene52150:intron | 30.0% | |
| TCACGTTAGATAACTACTAA+TGG | + | chr4.1:29145864-29145883 | None:intergenic | 30.0% | |
| TGACTGCTGTATTAATTTCA+GGG | - | chr4.1:29144677-29144696 | MS.gene52150:intron | 30.0% | |
| TGATTGCATGCTAAAACTTT+AGG | + | chr4.1:29147746-29147765 | None:intergenic | 30.0% | |
| TGTTTACTTCTGAATGACTT+TGG | + | chr4.1:29147817-29147836 | None:intergenic | 30.0% | |
| TTGTCACATGTGATTGAAAT+CGG | + | chr4.1:29145166-29145185 | None:intergenic | 30.0% | |
| TTTATTGCTTCCCATCAAAT+TGG | - | chr4.1:29146766-29146785 | MS.gene52150:intron | 30.0% | |
| ! | AATTTCAGGGATTTTCGTTA+AGG | - | chr4.1:29144690-29144709 | MS.gene52150:intron | 30.0% |
| ! | ACATATGTTTGGTTCAAAAG+AGG | + | chr4.1:29147649-29147668 | None:intergenic | 30.0% |
| ! | ATGTATGCTTTAAGTTATCC+TGG | - | chr4.1:29144123-29144142 | MS.gene52150:intron | 30.0% |
| ! | CATATGTTTGGTTCAAAAGA+GGG | + | chr4.1:29147648-29147667 | None:intergenic | 30.0% |
| ! | CGAAATAATACACATCGATT+GGG | + | chr4.1:29148410-29148429 | None:intergenic | 30.0% |
| ! | CTATTTTGCAGGAAAAGAAA+CGG | - | chr4.1:29145228-29145247 | MS.gene52150:CDS | 30.0% |
| ! | TTAACCTTTTATTCCTATCG+CGG | - | chr4.1:29145589-29145608 | MS.gene52150:intron | 30.0% |
| !! | ACAGTTTTAACGTCAATTGT+TGG | + | chr4.1:29145984-29146003 | None:intergenic | 30.0% |
| !! | ATGGTAAAGTTCTGAAACAA+CGG | + | chr4.1:29146963-29146982 | None:intergenic | 30.0% |
| !! | GTAACTCTTGGTTTTTCTAA+GGG | - | chr4.1:29146498-29146517 | MS.gene52150:intron | 30.0% |
| !! | GTTTGGTTCAATTTTTAGGA+GGG | - | chr4.1:29146704-29146723 | MS.gene52150:intron | 30.0% |
| !! | TGTAACTCTTGGTTTTTCTA+AGG | - | chr4.1:29146497-29146516 | MS.gene52150:intron | 30.0% |
| !! | TGTTTGGTTCAATTTTTAGG+AGG | - | chr4.1:29146703-29146722 | MS.gene52150:intron | 30.0% |
| !! | TTCTAAAGTAACAAAGTGGT+TGG | + | chr4.1:29143643-29143662 | None:intergenic | 30.0% |
| !! | TTTGGTTCAATTTTTAGGAG+GGG | - | chr4.1:29146705-29146724 | MS.gene52150:intron | 30.0% |
| !! | TTTTGTTGTGAATGAAACAG+AGG | - | chr4.1:29143778-29143797 | MS.gene52150:intron | 30.0% |
| !!! | AGACTAAGCTCATTGATTTT+CGG | - | chr4.1:29146134-29146153 | MS.gene52150:CDS | 30.0% |
| !!! | ATCAAATTGGAGTTTTTTGG+TGG | - | chr4.1:29146779-29146798 | MS.gene52150:intron | 30.0% |
| !!! | TCAAATTGGAGTTTTTTGGT+GGG | - | chr4.1:29146780-29146799 | MS.gene52150:intron | 30.0% |
| AAAGAAGCTTAAGCTTACCA+TGG | + | chr4.1:29143594-29143613 | None:intergenic | 35.0% | |
| ACCAAAAATCTCCAACCAAA+CGG | + | chr4.1:29146642-29146661 | None:intergenic | 35.0% | |
| ACGGTAGCAAAATAGAAGTA+GGG | + | chr4.1:29146938-29146957 | None:intergenic | 35.0% | |
| AGGTAAGCTCAAATGAGATA+TGG | - | chr4.1:29144241-29144260 | MS.gene52150:intron | 35.0% | |
| AGTCTTAACTGATTGCAAAC+GGG | + | chr4.1:29145792-29145811 | None:intergenic | 35.0% | |
| ATTCAATCTGACCCATAAGA+CGG | + | chr4.1:29143423-29143442 | None:intergenic | 35.0% | |
| CAGTCTTAACTGATTGCAAA+CGG | + | chr4.1:29145793-29145812 | None:intergenic | 35.0% | |
| CATTCATCTTCAAACAACCA+TGG | - | chr4.1:29143574-29143593 | MS.gene52150:intron | 35.0% | |
| CCAAAACTAGGGCTATATTA+AGG | + | chr4.1:29144751-29144770 | None:intergenic | 35.0% | |
| CTAAAACTTCACCTTACTTG+AGG | - | chr4.1:29145321-29145340 | MS.gene52150:CDS | 35.0% | |
| CTACAAGAGTCAATTTCTCT+GGG | + | chr4.1:29145106-29145125 | None:intergenic | 35.0% | |
| GAAGAATAATAAGCAACCAG+AGG | - | chr4.1:29143839-29143858 | MS.gene52150:intron | 35.0% | |
| GAGATCATTGATCATCATCA+TGG | + | chr4.1:29147278-29147297 | None:intergenic | 35.0% | |
| GATTTCAATCACATGTGACA+AGG | - | chr4.1:29145165-29145184 | MS.gene52150:intron | 35.0% | |
| GGTATCTTCTTTCCAGTAAT+GGG | + | chr4.1:29143882-29143901 | None:intergenic | 35.0% | |
| GTAGTTATCTAACGTGATGT+TGG | - | chr4.1:29145867-29145886 | MS.gene52150:intron | 35.0% | |
| GTGACTGCTGTATTAATTTC+AGG | - | chr4.1:29144676-29144695 | MS.gene52150:intron | 35.0% | |
| GTGACTTTGTCTAGTAATCT+TGG | - | chr4.1:29147967-29147986 | MS.gene52150:intron | 35.0% | |
| GTTTGCGTATAGGAGAAAAT+GGG | + | chr4.1:29143493-29143512 | None:intergenic | 35.0% | |
| TACGGTAGCAAAATAGAAGT+AGG | + | chr4.1:29146939-29146958 | None:intergenic | 35.0% | |
| TAGCAAAATAGAAGTAGGGT+TGG | + | chr4.1:29146934-29146953 | None:intergenic | 35.0% | |
| TATTGAGAAGCTTGTCATAC+TGG | - | chr4.1:29144960-29144979 | MS.gene52150:intron | 35.0% | |
| TCACAACTGCTTATGTAAGT+AGG | - | chr4.1:29144221-29144240 | MS.gene52150:intron | 35.0% | |
| TCGATTATTGAACTGGGTAT+TGG | - | chr4.1:29143666-29143685 | MS.gene52150:intron | 35.0% | |
| TCTCATTCAAATTACCTCGA+GGG | + | chr4.1:29144827-29144846 | None:intergenic | 35.0% | |
| TCTTGAAGATTCCTTAGATC+AGG | + | chr4.1:29146232-29146251 | None:intergenic | 35.0% | |
| TGATCATCATCATGGGATAA+TGG | + | chr4.1:29147270-29147289 | None:intergenic | 35.0% | |
| TGCAATGCAAATGACAGAAA+TGG | + | chr4.1:29146352-29146371 | None:intergenic | 35.0% | |
| TGCTAATGAAATGCGAGAAA+GGG | - | chr4.1:29145550-29145569 | MS.gene52150:intron | 35.0% | |
| TGGACAAGAAAAAGTGACAA+CGG | + | chr4.1:29147070-29147089 | None:intergenic | 35.0% | |
| TGGTATCTTCTTTCCAGTAA+TGG | + | chr4.1:29143883-29143902 | None:intergenic | 35.0% | |
| TGTTTGGATTAATGGGGAAT+GGG | - | chr4.1:29146523-29146542 | MS.gene52150:intron | 35.0% | |
| TTAAGGTGGTTTCATGAGTT+TGG | - | chr4.1:29144601-29144620 | MS.gene52150:intron | 35.0% | |
| TTGCTAATGAAATGCGAGAA+AGG | - | chr4.1:29145549-29145568 | MS.gene52150:intron | 35.0% | |
| ! | AAAACTTGTTCAAAGCCATC+AGG | - | chr4.1:29146204-29146223 | MS.gene52150:intron | 35.0% |
| ! | AAGGGTGTGTTTGGATTAAT+GGG | - | chr4.1:29146516-29146535 | MS.gene52150:intron | 35.0% |
| ! | AAGGTTTGAACCTGTTTTAC+CGG | + | chr4.1:29143393-29143412 | None:intergenic | 35.0% |
| ! | CAGAGAAATTGACTCTTGTA+GGG | - | chr4.1:29145105-29145124 | MS.gene52150:intron | 35.0% |
| ! | CCTTAATATAGCCCTAGTTT+TGG | - | chr4.1:29144748-29144767 | MS.gene52150:intron | 35.0% |
| ! | CGTTTCTTTTCCTGCAAAAT+AGG | + | chr4.1:29145230-29145249 | None:intergenic | 35.0% |
| ! | CTATCATCTTTTACTGTCTC+CGG | - | chr4.1:29148189-29148208 | MS.gene52150:intron | 35.0% |
| ! | TAAGGGTGTGTTTGGATTAA+TGG | - | chr4.1:29146515-29146534 | MS.gene52150:intron | 35.0% |
| ! | TGGTTGTAACTTGTAACTCT+TGG | - | chr4.1:29146486-29146505 | MS.gene52150:intron | 35.0% |
| ! | TTTTACCAGATTGTGCTTTC+TGG | - | chr4.1:29145900-29145919 | MS.gene52150:intron | 35.0% |
| !! | ATTCGCTTTGAAACACCTAT+AGG | + | chr4.1:29146181-29146200 | None:intergenic | 35.0% |
| !! | CTTATTTTCACAAGCTATCC+AGG | + | chr4.1:29144144-29144163 | None:intergenic | 35.0% |
| !! | CTTATTTTCGTAAGCTGTCT+AGG | + | chr4.1:29144383-29144402 | None:intergenic | 35.0% |
| !! | TCTAACTCATAGGTGGATTA+AGG | - | chr4.1:29144584-29144603 | MS.gene52150:intron | 35.0% |
| !!! | CAAATTGGAGTTTTTTGGTG+GGG | - | chr4.1:29146781-29146800 | MS.gene52150:intron | 35.0% |
| !!! | CCCATCAAATTGGAGTTTTT+TGG | - | chr4.1:29146776-29146795 | MS.gene52150:intron | 35.0% |
| !!! | TTTGGTTGGAGATTTTTGGT+GGG | - | chr4.1:29146642-29146661 | MS.gene52150:intron | 35.0% |
| AAAACCATTCAACCATGACC+CGG | - | chr4.1:29143445-29143464 | MS.gene52150:CDS | 40.0% | |
| AACAGCTTCAGATGGATCTT+AGG | - | chr4.1:29143946-29143965 | MS.gene52150:intron | 40.0% | |
| AAGTCAATTGAAACAGGTCC+TGG | - | chr4.1:29144478-29144497 | MS.gene52150:intron | 40.0% | |
| AATGCAAATGAGATACACCC+AGG | + | chr4.1:29144499-29144518 | None:intergenic | 40.0% | |
| AATGTAAGAGTAGGTCCTTG+TGG | + | chr4.1:29145359-29145378 | None:intergenic | 40.0% | |
| ACTAGGGCTATATTAAGGCA+AGG | + | chr4.1:29144746-29144765 | None:intergenic | 40.0% | |
| ACTAGTTGAAGAGTCATCCT+TGG | + | chr4.1:29148045-29148064 | None:intergenic | 40.0% | |
| AGAGACTTTCTGAATGTTGC+TGG | - | chr4.1:29145260-29145279 | MS.gene52150:CDS | 40.0% | |
| AGGGTGTGTTTGGATTAATG+GGG | - | chr4.1:29146517-29146536 | MS.gene52150:intron | 40.0% | |
| AGTCAATTGAAACAGGTCCT+GGG | - | chr4.1:29144479-29144498 | MS.gene52150:intron | 40.0% | |
| ATGTAAGAGTAGGTCCTTGT+GGG | + | chr4.1:29145358-29145377 | None:intergenic | 40.0% | |
| ATGTACCAAATTCGTCGAAG+AGG | + | chr4.1:29148101-29148120 | None:intergenic | 40.0% | |
| ATTGAAAAGGGACTGTGTTC+TGG | - | chr4.1:29148069-29148088 | MS.gene52150:intron | 40.0% | |
| CAACATACATGAGAGGCTAT+TGG | - | chr4.1:29144880-29144899 | MS.gene52150:intron | 40.0% | |
| CCTACAAGAGTCAATTTCTC+TGG | + | chr4.1:29145107-29145126 | None:intergenic | 40.0% | |
| CGAGGTAATTTGAATGAGAG+AGG | - | chr4.1:29144828-29144847 | MS.gene52150:intron | 40.0% | |
| CGTTTGCGTATAGGAGAAAA+TGG | + | chr4.1:29143494-29143513 | None:intergenic | 40.0% | |
| CTAATGCCGCAGTATATTTC+AGG | - | chr4.1:29146063-29146082 | MS.gene52150:CDS | 40.0% | |
| CTAGGGCTATATTAAGGCAA+GGG | + | chr4.1:29144745-29144764 | None:intergenic | 40.0% | |
| CTATCGCGGTGAAGAATTAA+GGG | - | chr4.1:29145603-29145622 | MS.gene52150:intron | 40.0% | |
| CTCTCATTCAAATTACCTCG+AGG | + | chr4.1:29144828-29144847 | None:intergenic | 40.0% | |
| CTGAAATATACTGCGGCATT+AGG | + | chr4.1:29146065-29146084 | None:intergenic | 40.0% | |
| GGATGACTCTTCAACTAGTT+AGG | - | chr4.1:29148046-29148065 | MS.gene52150:intron | 40.0% | |
| GTGTTTGGATTAATGGGGAA+TGG | - | chr4.1:29146522-29146541 | MS.gene52150:intron | 40.0% | |
| TATTTGCTTAAGGGTCCGTT+TGG | - | chr4.1:29146624-29146643 | MS.gene52150:intron | 40.0% | |
| TCAGTGGTGATTTACCTCTA+CGG | - | chr4.1:29145928-29145947 | MS.gene52150:intron | 40.0% | |
| TCCTCTTAAACAGCTTCAGA+TGG | - | chr4.1:29143938-29143957 | MS.gene52150:intron | 40.0% | |
| TGAAGCTGTTTAAGAGGAAC+AGG | + | chr4.1:29143936-29143955 | None:intergenic | 40.0% | |
| TTAAACTCTCGTCTTGCCAA+AGG | - | chr4.1:29146086-29146105 | MS.gene52150:CDS | 40.0% | |
| TTATACTGCTCTCAGTCTCA+AGG | - | chr4.1:29143983-29144002 | MS.gene52150:intron | 40.0% | |
| TTCAATCACATGTGACAAGG+TGG | - | chr4.1:29145168-29145187 | MS.gene52150:intron | 40.0% | |
| TTCAATCTGACCCATAAGAC+GGG | + | chr4.1:29143422-29143441 | None:intergenic | 40.0% | |
| TTCACCGCGATAGGAATAAA+AGG | + | chr4.1:29145596-29145615 | None:intergenic | 40.0% | |
| TTGAGACTGAGAGCAGTATA+AGG | + | chr4.1:29143984-29144003 | None:intergenic | 40.0% | |
| ! | AGGTTTGAACCTGTTTTACC+GGG | + | chr4.1:29143392-29143411 | None:intergenic | 40.0% |
| ! | CAAATCCAGAAAGCACAATC+TGG | + | chr4.1:29145908-29145927 | None:intergenic | 40.0% |
| ! | CCAGAGAAATTGACTCTTGT+AGG | - | chr4.1:29145104-29145123 | MS.gene52150:intron | 40.0% |
| ! | CCAGTAATGGGATCAATACT+TGG | + | chr4.1:29143870-29143889 | None:intergenic | 40.0% |
| ! | GTTTGGTTCAAAAGAGGGAA+GGG | + | chr4.1:29147643-29147662 | None:intergenic | 40.0% |
| ! | TATTTGAAGTATCAACGGGC+CGG | + | chr4.1:29143467-29143486 | None:intergenic | 40.0% |
| ! | TCCATCTGAAGCTGTTTAAG+AGG | + | chr4.1:29143942-29143961 | None:intergenic | 40.0% |
| ! | TCCGTTTGGTTGGAGATTTT+TGG | - | chr4.1:29146638-29146657 | MS.gene52150:intron | 40.0% |
| ! | TCTCATGTCTCCTATTTTGC+AGG | - | chr4.1:29145217-29145236 | MS.gene52150:CDS | 40.0% |
| ! | TGTTTGGTTCAAAAGAGGGA+AGG | + | chr4.1:29147644-29147663 | None:intergenic | 40.0% |
| ! | TTTGGTTCAAAAGAGGGAAG+GGG | + | chr4.1:29147642-29147661 | None:intergenic | 40.0% |
| !! | AAAAGATCTTTAGGGCATCG+AGG | + | chr4.1:29145434-29145453 | None:intergenic | 40.0% |
| !! | AACTCATAGGTGGATTAAGG+TGG | - | chr4.1:29144587-29144606 | MS.gene52150:intron | 40.0% |
| !! | AAGTTCTGAAACAACGGCTA+CGG | + | chr4.1:29146957-29146976 | None:intergenic | 40.0% |
| !! | CAACAGAGAGATTTGGTTTG+CGG | + | chr4.1:29143541-29143560 | None:intergenic | 40.0% |
| !! | CCAAGTATTGATCCCATTAC+TGG | - | chr4.1:29143867-29143886 | MS.gene52150:intron | 40.0% |
| !! | CTAAAACTTTAGGGTCCGTT+TGG | + | chr4.1:29147736-29147755 | None:intergenic | 40.0% |
| !! | CTTCTACAAAAAGTGCTGTC+AGG | - | chr4.1:29148004-29148023 | MS.gene52150:intron | 40.0% |
| !! | GGTTTTTCTAAGGGTGTGTT+TGG | - | chr4.1:29146507-29146526 | MS.gene52150:intron | 40.0% |
| !! | GTTCAATTTTTAGGAGGGGA+GGG | - | chr4.1:29146709-29146728 | MS.gene52150:intron | 40.0% |
| !! | GTTTGGTTGGAGATTTTTGG+TGG | - | chr4.1:29146641-29146660 | MS.gene52150:intron | 40.0% |
| !! | TGATTTGTAAGGGCTGGTTA+TGG | - | chr4.1:29147910-29147929 | MS.gene52150:intron | 40.0% |
| !! | TTCAATTTTTAGGAGGGGAG+GGG | - | chr4.1:29146710-29146729 | MS.gene52150:intron | 40.0% |
| !!! | TTGGTTGGAGATTTTTGGTG+GGG | - | chr4.1:29146643-29146662 | MS.gene52150:intron | 40.0% |
| !!! | TTTTCTGCTTTTTACCCTCG+AGG | - | chr4.1:29144810-29144829 | MS.gene52150:intron | 40.0% |
| ACCTTCTTCATCCCGTCTTA+TGG | - | chr4.1:29143408-29143427 | MS.gene52150:CDS | 45.0% | |
| AGAAAGCGAAGCAGATGATG+AGG | - | chr4.1:29147936-29147955 | MS.gene52150:intron | 45.0% | |
| AGGAAATGTGTGACACCCAT+AGG | + | chr4.1:29145287-29145306 | None:intergenic | 45.0% | |
| AGGGTTGGAAGAGTAGTTAC+AGG | + | chr4.1:29146919-29146938 | None:intergenic | 45.0% | |
| AGGTGGTTTCATGAGTTTGG+AGG | - | chr4.1:29144604-29144623 | MS.gene52150:intron | 45.0% | |
| ATGTTCGTTGTAAGCCGTAG+AGG | + | chr4.1:29145945-29145964 | None:intergenic | 45.0% | |
| CCTATCGCGGTGAAGAATTA+AGG | - | chr4.1:29145602-29145621 | MS.gene52150:intron | 45.0% | |
| CCTTAATTCTTCACCGCGAT+AGG | + | chr4.1:29145605-29145624 | None:intergenic | 45.0% | |
| CCTTCTTCATCCCGTCTTAT+GGG | - | chr4.1:29143409-29143428 | MS.gene52150:CDS | 45.0% | |
| CTGAATGTTGCTGGACCTAT+GGG | - | chr4.1:29145269-29145288 | MS.gene52150:CDS | 45.0% | |
| GAAGTCCTCTTCGACGAATT+TGG | - | chr4.1:29148093-29148112 | MS.gene52150:intron | 45.0% | |
| GCTAGGTTTCGTTTGCGTAT+AGG | + | chr4.1:29143503-29143522 | None:intergenic | 45.0% | |
| GTAGTTGCAACCCTCAAGTA+AGG | + | chr4.1:29145335-29145354 | None:intergenic | 45.0% | |
| GTGCTTTCTGGATTTGTCAG+TGG | - | chr4.1:29145912-29145931 | MS.gene52150:intron | 45.0% | |
| TCCTTAGATCAGGAACCTGA+TGG | + | chr4.1:29146222-29146241 | None:intergenic | 45.0% | |
| TCTGAATGTTGCTGGACCTA+TGG | - | chr4.1:29145268-29145287 | MS.gene52150:CDS | 45.0% | |
| TGTAAGAGTAGGTCCTTGTG+GGG | + | chr4.1:29145357-29145376 | None:intergenic | 45.0% | |
| ! | AACCTGTTTTACCGGGTCAT+GGG | + | chr4.1:29143385-29143404 | None:intergenic | 45.0% |
| ! | ATTTGAAGTATCAACGGGCC+GGG | + | chr4.1:29143466-29143485 | None:intergenic | 45.0% |
| ! | CACTTGTGATTTGTAAGGGC+TGG | - | chr4.1:29147904-29147923 | MS.gene52150:intron | 45.0% |
| ! | GTGCGTTGTTTCATTGAGCT+TGG | - | chr4.1:29143736-29143755 | MS.gene52150:intron | 45.0% |
| ! | TAGGGTCCGTTTGGTTCAAA+CGG | + | chr4.1:29147727-29147746 | None:intergenic | 45.0% |
| !! | CAGCACTTTTTGTAGAAGCG+CGG | + | chr4.1:29148002-29148021 | None:intergenic | 45.0% |
| !! | GGTTCAATTTTTAGGAGGGG+AGG | - | chr4.1:29146708-29146727 | MS.gene52150:intron | 45.0% |
| !!! | ATTGGAGTTTTTTGGTGGGG+AGG | - | chr4.1:29146784-29146803 | MS.gene52150:intron | 45.0% |
| !!! | TTGGAGATTTTTGGTGGGGA+GGG | - | chr4.1:29146647-29146666 | MS.gene52150:intron | 45.0% |
| !!! | TTGGAGTTTTTTGGTGGGGA+GGG | - | chr4.1:29146785-29146804 | MS.gene52150:intron | 45.0% |
| !! | ATATATTTAATTAAGTTTAA+GGG | - | chr4.1:29147582-29147601 | MS.gene52150:CDS | 5.0% |
| !!! | ATAATTTTATAAATATCTTA+TGG | - | chr4.1:29147438-29147457 | MS.gene52150:CDS | 5.0% |
| !!! | TAATTTTATAGTATTTTTTA+AGG | - | chr4.1:29143140-29143159 | MS.gene52150:intron | 5.0% |
| !!! | TATTTTAAAATTTATTTGTT+TGG | - | chr4.1:29146687-29146706 | MS.gene52150:intron | 5.0% |
| AACCCATGACCCGGTAAAAC+AGG | - | chr4.1:29143380-29143399 | MS.gene52150:CDS | 50.0% | |
| ACAAAACCCAACCCATGACC+CGG | - | chr4.1:29143371-29143390 | MS.gene52150:CDS | 50.0% | |
| CACTGTGCTGTGATTGTCAC+GGG | - | chr4.1:29147152-29147171 | MS.gene52150:intron | 50.0% | |
| CCACTGTGCTGTGATTGTCA+CGG | - | chr4.1:29147151-29147170 | MS.gene52150:intron | 50.0% | |
| CCCATAAGACGGGATGAAGA+AGG | + | chr4.1:29143412-29143431 | None:intergenic | 50.0% | |
| GCCATCAGGTTCCTGATCTA+AGG | - | chr4.1:29146218-29146237 | MS.gene52150:intron | 50.0% | |
| GCTGTCAGGCTTCAAGAGAT+TGG | - | chr4.1:29148018-29148037 | MS.gene52150:intron | 50.0% | |
| GGATTAATGGGGAATGGGAC+AGG | - | chr4.1:29146528-29146547 | MS.gene52150:intron | 50.0% | |
| GTTCAAAAGAGGGAAGGGGA+GGG | + | chr4.1:29147638-29147657 | None:intergenic | 50.0% | |
| TCAATACTTGGCTGTGCCTC+TGG | + | chr4.1:29143858-29143877 | None:intergenic | 50.0% | |
| TCCCCTCCGTTTGAACCAAA+CGG | - | chr4.1:29147718-29147737 | MS.gene52150:intron | 50.0% | |
| TGCTTAAGGGTCCGTTTGGT+TGG | - | chr4.1:29146628-29146647 | MS.gene52150:intron | 50.0% | |
| TTCAAAAGAGGGAAGGGGAG+GGG | + | chr4.1:29147637-29147656 | None:intergenic | 50.0% | |
| ! | GAACCTGTTTTACCGGGTCA+TGG | + | chr4.1:29143386-29143405 | None:intergenic | 50.0% |
| ! | GGCTTCAAGAGATTGGTCCA+AGG | - | chr4.1:29148025-29148044 | MS.gene52150:intron | 50.0% |
| ! | GTCCGTTTGGTTCAAACGGA+GGG | + | chr4.1:29147723-29147742 | None:intergenic | 50.0% |
| ! | GTTTTACCGGGTCATGGGTT+GGG | + | chr4.1:29143380-29143399 | None:intergenic | 50.0% |
| ! | TCCGTTTGGTTCAAACGGAG+GGG | + | chr4.1:29147722-29147741 | None:intergenic | 50.0% |
| ! | TGTTTTACCGGGTCATGGGT+TGG | + | chr4.1:29143381-29143400 | None:intergenic | 50.0% |
| ! | TTTGGTTCAAACGGAGGGGA+GGG | + | chr4.1:29147718-29147737 | None:intergenic | 50.0% |
| !! | AGAGAGATTTGGTTTGCGGC+TGG | + | chr4.1:29143537-29143556 | None:intergenic | 50.0% |
| !! | ATTTTTAGGAGGGGAGGGGA+TGG | - | chr4.1:29146714-29146733 | MS.gene52150:intron | 50.0% |
| !! | TTTTTAGGAGGGGAGGGGAT+GGG | - | chr4.1:29146715-29146734 | MS.gene52150:intron | 50.0% |
| !!! | AGTTTTTTGGTGGGGAGGGA+AGG | - | chr4.1:29146789-29146808 | MS.gene52150:intron | 50.0% |
| !!! | GTTGGAGATTTTTGGTGGGG+AGG | - | chr4.1:29146646-29146665 | MS.gene52150:intron | 50.0% |
| !!! | GTTTTTTGGTGGGGAGGGAA+GGG | - | chr4.1:29146790-29146809 | MS.gene52150:intron | 50.0% |
| !!! | TGGAGATTTTTGGTGGGGAG+GGG | - | chr4.1:29146648-29146667 | MS.gene52150:intron | 50.0% |
| AGGGTTGCAACTACCCCACA+AGG | - | chr4.1:29145341-29145360 | MS.gene52150:intron | 55.0% | |
| CCGTGACAATCACAGCACAG+TGG | + | chr4.1:29147154-29147173 | None:intergenic | 55.0% | |
| GGTTCAAAAGAGGGAAGGGG+AGG | + | chr4.1:29147639-29147658 | None:intergenic | 55.0% | |
| TTGGTTCAAACGGAGGGGAG+GGG | + | chr4.1:29147717-29147736 | None:intergenic | 55.0% | |
| ! | GGCTGGTAGTGCTAACTGCT+AGG | + | chr4.1:29143520-29143539 | None:intergenic | 55.0% |
| ! | GGTCCGTTTGGTTCAAACGG+AGG | + | chr4.1:29147724-29147743 | None:intergenic | 55.0% |
| ! | GTTTGGTTCAAACGGAGGGG+AGG | + | chr4.1:29147719-29147738 | None:intergenic | 55.0% |
| !! | TTTTAGGAGGGGAGGGGATG+GGG | - | chr4.1:29146716-29146735 | MS.gene52150:intron | 55.0% |
| !!! | AGATTTTTGGTGGGGAGGGG+AGG | - | chr4.1:29146651-29146670 | MS.gene52150:intron | 55.0% |
| !!! | ATTTTTGGTGGGGAGGGGAG+GGG | - | chr4.1:29146653-29146672 | MS.gene52150:intron | 55.0% |
| !!! | GATTTTTGGTGGGGAGGGGA+GGG | - | chr4.1:29146652-29146671 | MS.gene52150:intron | 55.0% |
| !!! | GGGTCATGGGTTGGGTTTTG+TGG | + | chr4.1:29143372-29143391 | None:intergenic | 55.0% |
| AAAAGAGGGAAGGGGAGGGG+AGG | + | chr4.1:29147634-29147653 | None:intergenic | 60.0% | |
| AAAGAGGGAAGGGGAGGGGA+GGG | + | chr4.1:29147633-29147652 | None:intergenic | 60.0% | |
| AGTATCAACGGGCCGGGTCA+TGG | + | chr4.1:29143460-29143479 | None:intergenic | 60.0% | |
| TTCAAACGGAGGGGAGGGGA+GGG | + | chr4.1:29147713-29147732 | None:intergenic | 60.0% | |
| CGGGCCGGGTCATGGTTGAA+TGG | + | chr4.1:29143452-29143471 | None:intergenic | 65.0% | |
| GTTCAAACGGAGGGGAGGGG+AGG | + | chr4.1:29147714-29147733 | None:intergenic | 65.0% | |
| TCAAACGGAGGGGAGGGGAG+GGG | + | chr4.1:29147712-29147731 | None:intergenic | 65.0% | |
| AGGAGGGGAGGGGATGGGGA+GGG | - | chr4.1:29146720-29146739 | MS.gene52150:intron | 70.0% | |
| AGGGGAGGGAAGGGAAGGGG+TGG | + | chr4.1:29147689-29147708 | None:intergenic | 70.0% | |
| AGGGGAGGGGAGGGAAGGGA+AGG | + | chr4.1:29147694-29147713 | None:intergenic | 70.0% | |
| GGGAGGGGAGGGAAGGGAAG+GGG | + | chr4.1:29147692-29147711 | None:intergenic | 70.0% | |
| GGGGAGGGAAGGGAAGGGGT+GGG | + | chr4.1:29147688-29147707 | None:intergenic | 70.0% | |
| GGGGAGGGGAGGGAAGGGAA+GGG | + | chr4.1:29147693-29147712 | None:intergenic | 70.0% | |
| TAGGAGGGGAGGGGATGGGG+AGG | - | chr4.1:29146719-29146738 | MS.gene52150:intron | 70.0% | |
| TTGGTGGGGAGGGGAGGGGA+GGG | - | chr4.1:29146657-29146676 | MS.gene52150:intron | 70.0% | |
| TTTGGTGGGGAGGGGAGGGG+AGG | - | chr4.1:29146656-29146675 | MS.gene52150:intron | 70.0% | |
| AACGGAGGGGAGGGGAGGGG+AGG | + | chr4.1:29147709-29147728 | None:intergenic | 75.0% | |
| ACGGAGGGGAGGGGAGGGGA+GGG | + | chr4.1:29147708-29147727 | None:intergenic | 75.0% | |
| AGGGGAGGGGAGGGGAGGGA+AGG | + | chr4.1:29147699-29147718 | None:intergenic | 75.0% | |
| GGGGAGGGGAGGGGAGGGAA+GGG | + | chr4.1:29147698-29147717 | None:intergenic | 75.0% | |
| TGGTGGGGAGGGGAGGGGAG+GGG | - | chr4.1:29146658-29146677 | MS.gene52150:intron | 75.0% | |
| ! | AGGGGAGGGGAGGGGAGGGG+AGG | + | chr4.1:29146685-29146666 | None:intergenic | 80.0% |
| ! | CGGAGGGGAGGGGAGGGGAG+GGG | + | chr4.1:29147707-29147726 | None:intergenic | 80.0% |
| ! | GGGAGGGGAGGGGAGGGGAG+GGG | - | chr4.1:29146663-29146682 | MS.gene52150:intron | 80.0% |
| ! | GGGGAGGGGAGGGGAGGGGA+GGG | - | chr4.1:29146662-29146681 | MS.gene52150:intron | 80.0% |
| ! | GGGGAGGGGAGGGGAGGGGA+GGG | + | chr4.1:29146681-29146662 | None:intergenic | 80.0% |
| ! | TGGGGAGGGGAGGGGAGGGG+AGG | - | chr4.1:29146661-29146680 | MS.gene52150:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 29142923 | 29148518 | 29142923 | ID=MS.gene52150 |
| chr4.1 | mRNA | 29142923 | 29148518 | 29142923 | ID=MS.gene52150.t1;Parent=MS.gene52150 |
| chr4.1 | exon | 29148516 | 29148518 | 29148516 | ID=MS.gene52150.t1.exon1;Parent=MS.gene52150.t1 |
| chr4.1 | CDS | 29148516 | 29148518 | 29148516 | ID=cds.MS.gene52150.t1;Parent=MS.gene52150.t1 |
| chr4.1 | exon | 29147437 | 29147643 | 29147437 | ID=MS.gene52150.t1.exon2;Parent=MS.gene52150.t1 |
| chr4.1 | CDS | 29147437 | 29147643 | 29147437 | ID=cds.MS.gene52150.t1;Parent=MS.gene52150.t1 |
| chr4.1 | exon | 29145972 | 29146202 | 29145972 | ID=MS.gene52150.t1.exon3;Parent=MS.gene52150.t1 |
| chr4.1 | CDS | 29145972 | 29146202 | 29145972 | ID=cds.MS.gene52150.t1;Parent=MS.gene52150.t1 |
| chr4.1 | exon | 29145440 | 29145532 | 29145440 | ID=MS.gene52150.t1.exon4;Parent=MS.gene52150.t1 |
| chr4.1 | CDS | 29145440 | 29145532 | 29145440 | ID=cds.MS.gene52150.t1;Parent=MS.gene52150.t1 |
| chr4.1 | exon | 29145169 | 29145356 | 29145169 | ID=MS.gene52150.t1.exon5;Parent=MS.gene52150.t1 |
| chr4.1 | CDS | 29145169 | 29145356 | 29145169 | ID=cds.MS.gene52150.t1;Parent=MS.gene52150.t1 |
| chr4.1 | exon | 29143300 | 29143520 | 29143300 | ID=MS.gene52150.t1.exon6;Parent=MS.gene52150.t1 |
| chr4.1 | CDS | 29143300 | 29143520 | 29143300 | ID=cds.MS.gene52150.t1;Parent=MS.gene52150.t1 |
| chr4.1 | exon | 29142923 | 29142945 | 29142923 | ID=MS.gene52150.t1.exon7;Parent=MS.gene52150.t1 |
| chr4.1 | CDS | 29142923 | 29142945 | 29142923 | ID=cds.MS.gene52150.t1;Parent=MS.gene52150.t1 |
| Gene Sequence |
| Protein sequence |
