Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45646.t1 | XP_024627906.1 | 92.3 | 556 | 28 | 2 | 10 | 551 | 9 | 563 | 1.30E-287 | 998.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45646.t1 | Q851S7 | 61.0 | 533 | 205 | 2 | 10 | 542 | 9 | 538 | 5.4e-186 | 652.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45646.t1 | A0A396GC47 | 89.3 | 559 | 42 | 3 | 10 | 551 | 9 | 566 | 5.6e-277 | 962.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45646.t1 | MTR_8g010330 | 88.129 | 556 | 44 | 4 | 10 | 551 | 9 | 556 | 0.0 | 991 |
| MS.gene45646.t1 | MTR_7g100040 | 70.115 | 609 | 124 | 6 | 1 | 551 | 1 | 609 | 0.0 | 843 |
| MS.gene45646.t1 | MTR_7g100040 | 66.524 | 466 | 98 | 6 | 144 | 551 | 22 | 487 | 0.0 | 609 |
| MS.gene45646.t1 | MTR_6g022610 | 68.333 | 180 | 15 | 2 | 138 | 317 | 1 | 138 | 9.79e-74 | 231 |
| MS.gene45646.t1 | MTR_6g022610 | 80.435 | 92 | 14 | 1 | 207 | 298 | 1 | 88 | 1.16e-43 | 151 |
| MS.gene45646.t1 | MTR_6g022570 | 61.321 | 106 | 27 | 1 | 431 | 522 | 30 | 135 | 1.09e-35 | 131 |
| MS.gene45646.t1 | MTR_6g022550 | 71.250 | 80 | 19 | 1 | 39 | 118 | 20 | 95 | 2.83e-29 | 114 |
| MS.gene45646.t1 | MTR_6g022550 | 63.636 | 77 | 20 | 1 | 435 | 511 | 87 | 155 | 5.73e-23 | 96.7 |
| MS.gene45646.t1 | MTR_6g022580 | 52.381 | 105 | 26 | 3 | 442 | 545 | 24 | 105 | 2.83e-20 | 86.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45646.t1 | AT5G14520 | 56.684 | 591 | 191 | 4 | 10 | 547 | 9 | 587 | 0.0 | 656 |
Find 120 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGCGGAAGAATTTCCTTTC+TGG | 0.198772 | 8.3:-78207004 | None:intergenic |
| CGAATAATCATGCCTATCTT+TGG | 0.286498 | 8.3:-78204808 | None:intergenic |
| AAGGAAATTCTTCCGCTTCC+TGG | 0.293167 | 8.3:+78207009 | MS.gene45646:CDS |
| CAAGTGGAGTCCAAGCAAAA+AGG | 0.303338 | 8.3:+78205864 | MS.gene45646:CDS |
| ATCATGCCTATCTTTGGTTT+TGG | 0.310993 | 8.3:-78204802 | None:intergenic |
| AACTCCTCATTTACTACAAC+AGG | 0.333847 | 8.3:+78205385 | MS.gene45646:CDS |
| TCTTCATCACGAACCTTTGC+TGG | 0.334518 | 8.3:+78204684 | MS.gene45646:CDS |
| CCAAGTGCATCCACAAATCT+TGG | 0.344978 | 8.3:-78204927 | None:intergenic |
| CAAAGATAGGCATGATTATT+CGG | 0.347474 | 8.3:+78204809 | MS.gene45646:CDS |
| ACCATTCATCGTTGATTCTC+CGG | 0.370813 | 8.3:-78207124 | None:intergenic |
| TGAAAAGAGGTAGACTGATT+TGG | 0.375506 | 8.3:-78204419 | None:intergenic |
| TTTGCCGACAGAAAGTTATA+TGG | 0.378288 | 8.3:+78206626 | MS.gene45646:CDS |
| TTTCTTGAGTGCTTGTGTCC+TGG | 0.385567 | 8.3:-78204394 | None:intergenic |
| ATATTAGGAAACTAAGCATT+TGG | 0.388894 | 8.3:+78204581 | MS.gene45646:intron |
| ACCCCGACAGCCTAAGAAAA+AGG | 0.389796 | 8.3:+78204615 | MS.gene45646:CDS |
| CCGTTTCATGGGAGGGAAAG+GGG | 0.390364 | 8.3:+78206387 | MS.gene45646:CDS |
| TGTGGATGCACTTGGAGAAT+TGG | 0.399033 | 8.3:+78204935 | MS.gene45646:CDS |
| CCTCTATCATTCTATAAACT+TGG | 0.401850 | 8.3:+78205617 | MS.gene45646:CDS |
| TCTGTTATGGTTGGCGTTGA+AGG | 0.409222 | 8.3:+78203782 | None:intergenic |
| TGGAAAAGAAGATTCACTTC+AGG | 0.419050 | 8.3:+78207035 | MS.gene45646:CDS |
| AATTGCCACAGCCTCTTCTT+CGG | 0.420224 | 8.3:+78205580 | MS.gene45646:intron |
| TGTATGGTAGGGGAAGAAAA+AGG | 0.429263 | 8.3:+78204347 | MS.gene45646:intron |
| TTGATAGTCTTTGCATAGTC+GGG | 0.431043 | 8.3:-78206964 | None:intergenic |
| CACCGTTTCATGGGAGGGAA+AGG | 0.432749 | 8.3:+78206385 | MS.gene45646:CDS |
| ACCGTTTCATGGGAGGGAAA+GGG | 0.435968 | 8.3:+78206386 | MS.gene45646:CDS |
| CTCTGATCAGATTCATCAAA+AGG | 0.440553 | 8.3:-78206413 | None:intergenic |
| CCAAGATTTGTGGATGCACT+TGG | 0.444772 | 8.3:+78204927 | MS.gene45646:CDS |
| ATTCTTCCGCTTCCTGGTGT+TGG | 0.448314 | 8.3:+78207015 | MS.gene45646:CDS |
| CATTTGTGTAGATTGTTGAC+AGG | 0.449441 | 8.3:+78206523 | MS.gene45646:intron |
| CGGTTGGAAGCTTTCGCAGC+AGG | 0.453005 | 8.3:+78205663 | MS.gene45646:CDS |
| CGGACTTGCAAACAGGCTAC+TGG | 0.453023 | 8.3:+78204771 | MS.gene45646:CDS |
| AAAACACCAAAACCAAAGAT+AGG | 0.454553 | 8.3:+78204796 | MS.gene45646:CDS |
| CTTGCAAGCTGCTGCCAGAA+AGG | 0.459351 | 8.3:+78206990 | MS.gene45646:CDS |
| TCTTAAATTCTTCTTGAGTA+GGG | 0.459842 | 8.3:+78206046 | MS.gene45646:CDS |
| CTTAGCAGGTGAAGATGAAA+AGG | 0.460339 | 8.3:+78205986 | MS.gene45646:CDS |
| CTGTTTCTACCAGACATCAT+AGG | 0.460378 | 8.3:-78207177 | None:intergenic |
| CCCCTTTCCCTCCCATGAAA+CGG | 0.462396 | 8.3:-78206387 | None:intergenic |
| TCCAGAGGGTTTGCTCGCAT+TGG | 0.462811 | 8.3:-78205805 | None:intergenic |
| GAAAGCTAACATCTTTCAAA+TGG | 0.466679 | 8.3:-78204663 | None:intergenic |
| ATCTTAAATTCTTCTTGAGT+AGG | 0.472930 | 8.3:+78206045 | MS.gene45646:CDS |
| AAAACCACGGACTTGCAAAC+AGG | 0.475945 | 8.3:+78204764 | MS.gene45646:CDS |
| TTTGTGCAGGCTGAGGTTGA+GGG | 0.480167 | 8.3:+78205344 | MS.gene45646:intron |
| TTTGTTAACTATGACGAAGA+AGG | 0.480194 | 8.3:+78206934 | MS.gene45646:CDS |
| TGCACTAATGCACCTGGTTG+AGG | 0.481076 | 8.3:+78205962 | MS.gene45646:CDS |
| TACAAATAATACCTGAAAAG+AGG | 0.485388 | 8.3:-78204432 | None:intergenic |
| GGAAAAGAAGATTCACTTCA+GGG | 0.490886 | 8.3:+78207036 | MS.gene45646:CDS |
| TCTTCGTCATAGTTAACAAA+AGG | 0.491004 | 8.3:-78206931 | None:intergenic |
| GCCAATGCGAGCAAACCCTC+TGG | 0.496559 | 8.3:+78205804 | MS.gene45646:CDS |
| CAGGTTCATTAGAAAGAAGT+TGG | 0.499834 | 8.3:-78205938 | None:intergenic |
| TTATAGGTACCCAAGATTTG+TGG | 0.501589 | 8.3:+78204917 | MS.gene45646:intron |
| CCAAGTTTATAGAATGATAG+AGG | 0.510142 | 8.3:-78205617 | None:intergenic |
| TCTAATTACTCAGGTACAAA+GGG | 0.510871 | 8.3:+78206328 | MS.gene45646:intron |
| TGCAGAAAATTTAGCATGGT+AGG | 0.520334 | 8.3:-78205431 | None:intergenic |
| ATCCTCCCAGGCTTGATACT+CGG | 0.520338 | 8.3:+78205643 | MS.gene45646:CDS |
| CAAGTGCATCCACAAATCTT+GGG | 0.522176 | 8.3:-78204926 | None:intergenic |
| GGTGGCACCGTTTCATGGGA+GGG | 0.524004 | 8.3:+78206380 | MS.gene45646:CDS |
| AAAACATTTGTATCGGTGAA+AGG | 0.526757 | 8.3:+78205233 | MS.gene45646:CDS |
| GTCTAATTACTCAGGTACAA+AGG | 0.527454 | 8.3:+78206327 | MS.gene45646:intron |
| ACAGGGATGCGCAAGGCCAT+AGG | 0.528933 | 8.3:+78206541 | MS.gene45646:CDS |
| GAAACGGTGCCACCAAAAGC+AGG | 0.530500 | 8.3:-78206371 | None:intergenic |
| GTTCTATGTTCTTCCAGCAA+AGG | 0.536261 | 8.3:-78204697 | None:intergenic |
| ACCGGAGAATCAACGATGAA+TGG | 0.536307 | 8.3:+78207123 | MS.gene45646:CDS |
| TGGTGGCACCGTTTCATGGG+AGG | 0.536528 | 8.3:+78206379 | MS.gene45646:CDS |
| GTTGAGGAAAACATTTGTAT+CGG | 0.536912 | 8.3:+78205226 | MS.gene45646:CDS |
| CAACTTCTTTCTAATGAACC+TGG | 0.539088 | 8.3:+78205939 | MS.gene45646:CDS |
| AATGAAATTAGACGAAGCTA+AGG | 0.539472 | 8.3:+78207431 | MS.gene45646:CDS |
| TAGGCATGATTATTCGGCAG+AGG | 0.542209 | 8.3:+78204815 | MS.gene45646:CDS |
| TTGCTAGATTGGCACATGAA+TGG | 0.542766 | 8.3:+78205177 | MS.gene45646:intron |
| GCTACAGTCTCTGTTATGGT+TGG | 0.543855 | 8.3:+78203773 | None:intergenic |
| TTTGATAGTCTTTGCATAGT+CGG | 0.544653 | 8.3:-78206965 | None:intergenic |
| GTTAGCTGAATCTAAACAAG+TGG | 0.545674 | 8.3:+78205848 | MS.gene45646:CDS |
| TAGACGAAGCTAAGGGTCAA+AGG | 0.556106 | 8.3:+78207439 | MS.gene45646:CDS |
| ACCAGGTGCATTAGTGCACC+AGG | 0.556317 | 8.3:-78205957 | None:intergenic |
| ATGAGTTTACCTATGATGTC+TGG | 0.556419 | 8.3:+78207168 | MS.gene45646:CDS |
| GCCGACAGAAAGTTATATGG+TGG | 0.557386 | 8.3:+78206629 | MS.gene45646:CDS |
| AAAAGAAACATCTGCTGGTG+TGG | 0.557653 | 8.3:+78207095 | MS.gene45646:intron |
| TGATCAGAGCATTACTCACC+AGG | 0.557981 | 8.3:+78206427 | MS.gene45646:CDS |
| ATTCTCTAGATAGAAACCTA+TGG | 0.559229 | 8.3:-78206557 | None:intergenic |
| TTCCAACCGAGTATCAAGCC+TGG | 0.561392 | 8.3:-78205649 | None:intergenic |
| CGTTTCATGGGAGGGAAAGG+GGG | 0.566449 | 8.3:+78206388 | MS.gene45646:CDS |
| TCCCAGGCTTGATACTCGGT+TGG | 0.569177 | 8.3:+78205647 | MS.gene45646:CDS |
| TCCAACCGAGTATCAAGCCT+GGG | 0.572418 | 8.3:-78205648 | None:intergenic |
| ACAACCTGTTGTAGTAAATG+AGG | 0.582229 | 8.3:-78205389 | None:intergenic |
| AAAGGTGACAAGTGAGGTGG+AGG | 0.584834 | 8.3:-78206913 | None:intergenic |
| CACCTGGTTGAGGACTTAGC+AGG | 0.587931 | 8.3:+78205972 | MS.gene45646:CDS |
| CAGAAAGTTATATGGTGGGA+AGG | 0.588140 | 8.3:+78206634 | MS.gene45646:CDS |
| AAATTCACAAACCGAAGAAG+AGG | 0.592721 | 8.3:-78205591 | None:intergenic |
| GCTTCAAGTATCAGTCCAGA+GGG | 0.593688 | 8.3:-78205819 | None:intergenic |
| GTAGCCTGTTTGCAAGTCCG+TGG | 0.598008 | 8.3:-78204768 | None:intergenic |
| ATGCTGCAAAATTTGTCACC+AGG | 0.598627 | 8.3:+78204376 | MS.gene45646:CDS |
| TAAATTCTTCTTGAGTAGGG+AGG | 0.600886 | 8.3:+78206049 | MS.gene45646:CDS |
| GTTCATTAGAAAGAAGTTGG+TGG | 0.606617 | 8.3:-78205935 | None:intergenic |
| CCCACCATATAACTTTCTGT+CGG | 0.607248 | 8.3:-78206630 | None:intergenic |
| ACCTGGTGCACTAATGCACC+TGG | 0.610139 | 8.3:+78205956 | MS.gene45646:CDS |
| CCGACAGAAAGTTATATGGT+GGG | 0.610921 | 8.3:+78206630 | MS.gene45646:CDS |
| TAAACTTGGAGTATCCTCCC+AGG | 0.613538 | 8.3:+78205631 | MS.gene45646:CDS |
| TATCTCGTACTCACAAGTTG+AGG | 0.614176 | 8.3:+78205210 | MS.gene45646:CDS |
| AGGAAACTAAGCATTTGGAA+AGG | 0.618165 | 8.3:+78204586 | MS.gene45646:intron |
| TCTGCTGGTGTGGTACAGAC+CGG | 0.618662 | 8.3:+78207105 | MS.gene45646:CDS |
| AGCTTCAAGTATCAGTCCAG+AGG | 0.619437 | 8.3:-78205820 | None:intergenic |
| CACCTGCTAAGTCCTCAACC+AGG | 0.634464 | 8.3:-78205974 | None:intergenic |
| ATTTGTGTAGATTGTTGACA+GGG | 0.635765 | 8.3:+78206524 | MS.gene45646:intron |
| GGTGAAAGGCATATACTACC+AGG | 0.639619 | 8.3:+78205247 | MS.gene45646:CDS |
| ATGATGTCTGGTAGAAACAG+AGG | 0.640515 | 8.3:+78207180 | MS.gene45646:CDS |
| ATGAAATTAGACGAAGCTAA+GGG | 0.640863 | 8.3:+78207432 | MS.gene45646:CDS |
| AAAAGGTCAAGGGAACTCAT+CGG | 0.645163 | 8.3:+78204632 | MS.gene45646:CDS |
| TGATGTCTGGTAGAAACAGA+GGG | 0.647301 | 8.3:+78207181 | MS.gene45646:CDS |
| ATTGTTGACAGGGATGCGCA+AGG | 0.648110 | 8.3:+78206534 | MS.gene45646:CDS |
| AGCTCGTACACAAATGCCGA+AGG | 0.653316 | 8.3:+78205027 | MS.gene45646:CDS |
| GAGAATATGTTCAACCACAG+TGG | 0.666305 | 8.3:+78206574 | MS.gene45646:CDS |
| TTAACAAAAGGTGACAAGTG+AGG | 0.666442 | 8.3:-78206919 | None:intergenic |
| ACAAAAGGTGACAAGTGAGG+TGG | 0.668607 | 8.3:-78206916 | None:intergenic |
| AAATTGCAGAAAATTTAGCA+TGG | 0.670054 | 8.3:-78205435 | None:intergenic |
| AGGGTTATACAAAGCCATGA+CGG | 0.670246 | 8.3:+78207200 | MS.gene45646:CDS |
| ATTGGACGACTGTCTTACAA+TGG | 0.686764 | 8.3:+78204953 | MS.gene45646:CDS |
| AACCGAGTATCAAGCCTGGG+AGG | 0.694808 | 8.3:-78205645 | None:intergenic |
| AGTTTATAGAATGATAGAGG+CGG | 0.695179 | 8.3:-78205614 | None:intergenic |
| AGACTGATCGCATCAAACAG+CGG | 0.702142 | 8.3:+78207406 | MS.gene45646:CDS |
| TTGAGGGTCAGACAATAACA+TGG | 0.704070 | 8.3:+78205360 | MS.gene45646:CDS |
| ACACAATCAAATATCCACTG+TGG | 0.774512 | 8.3:-78206588 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATATTAATGTTTATATTTA+GGG | + | chr8.3:78205472-78205491 | MS.gene45646:intron | 10.0% |
| !! | TCATATTAATGTTTATATTT+AGG | + | chr8.3:78205471-78205490 | MS.gene45646:intron | 10.0% |
| !! | TGAAATGAATTAATAATATA+TGG | + | chr8.3:78206184-78206203 | MS.gene45646:intron | 10.0% |
| !! | TTAATCCTTTAAATATATTT+GGG | + | chr8.3:78203906-78203925 | MS.gene45646:intron | 10.0% |
| !! | TTTAATCCTTTAAATATATT+TGG | + | chr8.3:78203905-78203924 | MS.gene45646:intron | 10.0% |
| !! | AATAAATAAATTGAGAAGAT+AGG | - | chr8.3:78205144-78205163 | None:intergenic | 15.0% |
| !! | TAATCCTTTAAATATATTTG+GGG | + | chr8.3:78203907-78203926 | MS.gene45646:intron | 15.0% |
| !! | TAGATATATAATAGTTATCA+GGG | + | chr8.3:78204056-78204075 | MS.gene45646:intron | 15.0% |
| !! | TTAGATATATAATAGTTATC+AGG | + | chr8.3:78204055-78204074 | MS.gene45646:intron | 15.0% |
| !!! | AACATTTTAAGTTTTTAACT+TGG | - | chr8.3:78206875-78206894 | None:intergenic | 15.0% |
| !!! | ACATTTTAAGTTTTTAACTT+GGG | - | chr8.3:78206874-78206893 | None:intergenic | 15.0% |
| !!! | TTAATTTTCCTATGTATTAT+AGG | + | chr8.3:78204901-78204920 | MS.gene45646:intron | 15.0% |
| !!! | TTTTTGTTTTGTTTTGTTTT+TGG | + | chr8.3:78203821-78203840 | MS.gene45646:intron | 15.0% |
| !! | AAAAAATTGTACATGTCATA+TGG | + | chr8.3:78205303-78205322 | MS.gene45646:intron | 20.0% |
| !! | AAAATAATAAGCATGGAAAA+TGG | - | chr8.3:78206670-78206689 | None:intergenic | 20.0% |
| !! | AATATCTCAGTGAATATAAA+AGG | - | chr8.3:78206498-78206517 | None:intergenic | 20.0% |
| !! | ATAGGTTAAAATGGTAAAAA+TGG | + | chr8.3:78204152-78204171 | MS.gene45646:intron | 20.0% |
| !! | CATAGGAAAATTAAATAAAC+TGG | - | chr8.3:78204895-78204914 | None:intergenic | 20.0% |
| !! | TAAAAATGGAACATCAAAAA+CGG | + | chr8.3:78204166-78204185 | MS.gene45646:intron | 20.0% |
| !! | TTATCTCTTGAACTTATTTA+TGG | + | chr8.3:78206258-78206277 | MS.gene45646:intron | 20.0% |
| !!! | AAAATGTTTCTTTTGTTAAC+AGG | + | chr8.3:78206887-78206906 | MS.gene45646:intron | 20.0% |
| !!! | AAACTTGATTTTGTAAAATG+AGG | - | chr8.3:78203972-78203991 | None:intergenic | 20.0% |
| !!! | ATTTTCCATGCTTATTATTT+TGG | + | chr8.3:78206669-78206688 | MS.gene45646:intron | 20.0% |
| !!! | TTATTATTTTGGGTTCATTA+GGG | + | chr8.3:78206680-78206699 | MS.gene45646:intron | 20.0% |
| !!! | TTTTCCATGCTTATTATTTT+GGG | + | chr8.3:78206670-78206689 | MS.gene45646:intron | 20.0% |
| ! | AAAAGTAGCAACAACATTAA+GGG | - | chr8.3:78204328-78204347 | None:intergenic | 25.0% |
| ! | AAATTGCAGAAAATTTAGCA+TGG | - | chr8.3:78205438-78205457 | None:intergenic | 25.0% |
| ! | AACTAGTTAGAAAAGAAGAA+TGG | + | chr8.3:78203864-78203883 | MS.gene45646:intron | 25.0% |
| ! | ATATATAATAGTTATCAGGG+TGG | + | chr8.3:78204059-78204078 | MS.gene45646:intron | 25.0% |
| ! | ATATTAGGAAACTAAGCATT+TGG | + | chr8.3:78204581-78204600 | MS.gene45646:intron | 25.0% |
| ! | ATCTTAAATTCTTCTTGAGT+AGG | + | chr8.3:78206045-78206064 | MS.gene45646:CDS | 25.0% |
| ! | ATTAAAAAAGTTTACCGTCA+TGG | - | chr8.3:78207217-78207236 | None:intergenic | 25.0% |
| ! | CTTTAATAACATAGTACAAG+AGG | + | chr8.3:78204128-78204147 | MS.gene45646:intron | 25.0% |
| ! | TAACAAGATGAAAAGAAGAA+AGG | - | chr8.3:78206798-78206817 | None:intergenic | 25.0% |
| ! | TACAAATAATACCTGAAAAG+AGG | - | chr8.3:78204435-78204454 | None:intergenic | 25.0% |
| ! | TCAAATTTGCACTTTCTTAA+AGG | - | chr8.3:78205109-78205128 | None:intergenic | 25.0% |
| ! | TCTTAAATTCTTCTTGAGTA+GGG | + | chr8.3:78206046-78206065 | MS.gene45646:CDS | 25.0% |
| ! | TTCCAAGTATTATATACCTT+CGG | - | chr8.3:78205046-78205065 | None:intergenic | 25.0% |
| !! | AAATTTTCTGCAATTTTACG+AGG | + | chr8.3:78205442-78205461 | MS.gene45646:CDS | 25.0% |
| !! | ATGGGTTAAGTATTTACAAT+TGG | + | chr8.3:78207302-78207321 | MS.gene45646:intron | 25.0% |
| !! | CAGGTATTATTTGTATTTTC+TGG | + | chr8.3:78204440-78204459 | MS.gene45646:intron | 25.0% |
| !! | GATTAAGCATATACTTTTCT+AGG | + | chr8.3:78206455-78206474 | MS.gene45646:intron | 25.0% |
| !! | TAATGGTTCTGTGAATAATT+GGG | + | chr8.3:78206114-78206133 | MS.gene45646:intron | 25.0% |
| !!! | CTTATTATTTTGGGTTCATT+AGG | + | chr8.3:78206679-78206698 | MS.gene45646:intron | 25.0% |
| !!! | GATTGATTATATTTTTGTGC+AGG | + | chr8.3:78205331-78205350 | MS.gene45646:intron | 25.0% |
| AAAACACCAAAACCAAAGAT+AGG | + | chr8.3:78204796-78204815 | MS.gene45646:CDS | 30.0% | |
| AACAACTCAAGTAAAGCATA+AGG | - | chr8.3:78207242-78207261 | None:intergenic | 30.0% | |
| AATGAAATTAGACGAAGCTA+AGG | + | chr8.3:78207431-78207450 | MS.gene45646:CDS | 30.0% | |
| ACACATCTATTTGGAAGTAA+TGG | + | chr8.3:78206097-78206116 | MS.gene45646:intron | 30.0% | |
| AGCAGGAATAACAAAAAGTA+AGG | - | chr8.3:78206357-78206376 | None:intergenic | 30.0% | |
| AGTTTATAGAATGATAGAGG+CGG | - | chr8.3:78205617-78205636 | None:intergenic | 30.0% | |
| ATAATATATGGATGATGTGC+AGG | + | chr8.3:78206196-78206215 | MS.gene45646:intron | 30.0% | |
| ATGAAATTAGACGAAGCTAA+GGG | + | chr8.3:78207432-78207451 | MS.gene45646:CDS | 30.0% | |
| ATTCTCTAGATAGAAACCTA+TGG | - | chr8.3:78206560-78206579 | None:intergenic | 30.0% | |
| ATTTGTGTAGATTGTTGACA+GGG | + | chr8.3:78206524-78206543 | MS.gene45646:intron | 30.0% | |
| CAAAAGTAGCAACAACATTA+AGG | - | chr8.3:78204329-78204348 | None:intergenic | 30.0% | |
| CAAAGATAGGCATGATTATT+CGG | + | chr8.3:78204809-78204828 | MS.gene45646:CDS | 30.0% | |
| CATGCCCCAAATATATTTAA+AGG | - | chr8.3:78203914-78203933 | None:intergenic | 30.0% | |
| CCAAGTTTATAGAATGATAG+AGG | - | chr8.3:78205620-78205639 | None:intergenic | 30.0% | |
| CCTCTATCATTCTATAAACT+TGG | + | chr8.3:78205617-78205636 | MS.gene45646:CDS | 30.0% | |
| CTCAATTTATATCTTGTAGC+TGG | + | chr8.3:78204858-78204877 | MS.gene45646:intron | 30.0% | |
| GAAAGCTAACATCTTTCAAA+TGG | - | chr8.3:78204666-78204685 | None:intergenic | 30.0% | |
| GGCAATTCATTATGAAGTTA+AGG | - | chr8.3:78205567-78205586 | None:intergenic | 30.0% | |
| GTTGAGGAAAACATTTGTAT+CGG | + | chr8.3:78205226-78205245 | MS.gene45646:CDS | 30.0% | |
| TACTACTTCGATTCTTACAT+TGG | + | chr8.3:78204549-78204568 | MS.gene45646:intron | 30.0% | |
| TATATGCTTAATCACAAACC+TGG | - | chr8.3:78206448-78206467 | None:intergenic | 30.0% | |
| TCTAATTACTCAGGTACAAA+GGG | + | chr8.3:78206328-78206347 | MS.gene45646:intron | 30.0% | |
| TCTCAGTGAATATAAAAGGA+AGG | - | chr8.3:78206494-78206513 | None:intergenic | 30.0% | |
| TCTGTGAATAATTGGGAAAT+CGG | + | chr8.3:78206121-78206140 | MS.gene45646:intron | 30.0% | |
| TCTTCGTCATAGTTAACAAA+AGG | - | chr8.3:78206934-78206953 | None:intergenic | 30.0% | |
| TGAAAAGAAGAAAGGATATG+TGG | - | chr8.3:78206790-78206809 | None:intergenic | 30.0% | |
| TGAACCCAAAATAATAAGCA+TGG | - | chr8.3:78206677-78206696 | None:intergenic | 30.0% | |
| TTTGTTAACTATGACGAAGA+AGG | + | chr8.3:78206934-78206953 | MS.gene45646:CDS | 30.0% | |
| ! | AAAACATTTGTATCGGTGAA+AGG | + | chr8.3:78205233-78205252 | MS.gene45646:CDS | 30.0% |
| ! | AAATATATTTGGGGCATGTT+AGG | + | chr8.3:78203916-78203935 | MS.gene45646:intron | 30.0% |
| ! | ACAAGAGGTATAGGTTAAAA+TGG | + | chr8.3:78204143-78204162 | MS.gene45646:intron | 30.0% |
| ! | GTAATGGTTCTGTGAATAAT+TGG | + | chr8.3:78206113-78206132 | MS.gene45646:intron | 30.0% |
| ! | TAACATAGTACAAGAGGTAT+AGG | + | chr8.3:78204134-78204153 | MS.gene45646:intron | 30.0% |
| ! | TACCATTTTCTGAACTTAGA+TGG | + | chr8.3:78205686-78205705 | MS.gene45646:intron | 30.0% |
| ! | TTTGATAGTCTTTGCATAGT+CGG | - | chr8.3:78206968-78206987 | None:intergenic | 30.0% |
| !!! | ATGTTGTTGCTACTTTTGTA+TGG | + | chr8.3:78204331-78204350 | MS.gene45646:intron | 30.0% |
| !!! | CATTGGCTTTTGCAAATATT+AGG | + | chr8.3:78204566-78204585 | MS.gene45646:intron | 30.0% |
| !!! | CTTTTTGTTATTCCTGCTTT+TGG | + | chr8.3:78206359-78206378 | MS.gene45646:CDS | 30.0% |
| AAATTCACAAACCGAAGAAG+AGG | - | chr8.3:78205594-78205613 | None:intergenic | 35.0% | |
| AACTCCTCATTTACTACAAC+AGG | + | chr8.3:78205385-78205404 | MS.gene45646:CDS | 35.0% | |
| AATGGTTGCAAAGTGATTGA+TGG | + | chr8.3:78207283-78207302 | MS.gene45646:intron | 35.0% | |
| ACAACCTGTTGTAGTAAATG+AGG | - | chr8.3:78205392-78205411 | None:intergenic | 35.0% | |
| ACACAATCAAATATCCACTG+TGG | - | chr8.3:78206591-78206610 | None:intergenic | 35.0% | |
| AGGAAACTAAGCATTTGGAA+AGG | + | chr8.3:78204586-78204605 | MS.gene45646:intron | 35.0% | |
| ATACTACCAGGTATCAATTG+TGG | + | chr8.3:78205259-78205278 | MS.gene45646:intron | 35.0% | |
| ATATAGAAAGCGAGTCTATG+TGG | + | chr8.3:78206833-78206852 | MS.gene45646:intron | 35.0% | |
| ATGAGTTTACCTATGATGTC+TGG | + | chr8.3:78207168-78207187 | MS.gene45646:CDS | 35.0% | |
| ATGGTTGCAAAGTGATTGAT+GGG | + | chr8.3:78207284-78207303 | MS.gene45646:intron | 35.0% | |
| CAACTTCTTTCTAATGAACC+TGG | + | chr8.3:78205939-78205958 | MS.gene45646:CDS | 35.0% | |
| CAGGTTCATTAGAAAGAAGT+TGG | - | chr8.3:78205941-78205960 | None:intergenic | 35.0% | |
| CATTTGTGTAGATTGTTGAC+AGG | + | chr8.3:78206523-78206542 | MS.gene45646:intron | 35.0% | |
| CGAATAATCATGCCTATCTT+TGG | - | chr8.3:78204811-78204830 | None:intergenic | 35.0% | |
| CTCTAGCGTTGTTTATGTTT+GGG | + | chr8.3:78204008-78204027 | MS.gene45646:intron | 35.0% | |
| CTCTGATCAGATTCATCAAA+AGG | - | chr8.3:78206416-78206435 | None:intergenic | 35.0% | |
| CTGTGAATAATTGGGAAATC+GGG | + | chr8.3:78206122-78206141 | MS.gene45646:intron | 35.0% | |
| CTTATTTGTCGTAGCAATCT+TGG | + | chr8.3:78206705-78206724 | MS.gene45646:intron | 35.0% | |
| CTTGGGTACCTATAATACAT+AGG | - | chr8.3:78204912-78204931 | None:intergenic | 35.0% | |
| GGAAAAGAAGATTCACTTCA+GGG | + | chr8.3:78207036-78207055 | MS.gene45646:CDS | 35.0% | |
| GTCAAAAAAGAAACATCTGC+TGG | + | chr8.3:78207090-78207109 | MS.gene45646:intron | 35.0% | |
| GTCCATCTAAGTTCAGAAAA+TGG | - | chr8.3:78205691-78205710 | None:intergenic | 35.0% | |
| GTCTAATTACTCAGGTACAA+AGG | + | chr8.3:78206327-78206346 | MS.gene45646:intron | 35.0% | |
| GTTAGCTGAATCTAAACAAG+TGG | + | chr8.3:78205848-78205867 | MS.gene45646:CDS | 35.0% | |
| GTTCATTAGAAAGAAGTTGG+TGG | - | chr8.3:78205938-78205957 | None:intergenic | 35.0% | |
| TAAATTCTTCTTGAGTAGGG+AGG | + | chr8.3:78206049-78206068 | MS.gene45646:CDS | 35.0% | |
| TCTTGGCAAACACATCTATT+TGG | + | chr8.3:78206088-78206107 | MS.gene45646:intron | 35.0% | |
| TGAAAAGAGGTAGACTGATT+TGG | - | chr8.3:78204422-78204441 | None:intergenic | 35.0% | |
| TGCAGAAAATTTAGCATGGT+AGG | - | chr8.3:78205434-78205453 | None:intergenic | 35.0% | |
| TGGAAAAGAAGATTCACTTC+AGG | + | chr8.3:78207035-78207054 | MS.gene45646:CDS | 35.0% | |
| TGTGAATAATTGGGAAATCG+GGG | + | chr8.3:78206123-78206142 | MS.gene45646:intron | 35.0% | |
| TGTTTGCCAAGACTATCAAA+GGG | - | chr8.3:78206080-78206099 | None:intergenic | 35.0% | |
| TTAACAAAAGGTGACAAGTG+AGG | - | chr8.3:78206922-78206941 | None:intergenic | 35.0% | |
| TTATAGGTACCCAAGATTTG+TGG | + | chr8.3:78204917-78204936 | MS.gene45646:intron | 35.0% | |
| TTCTTTGTCCTCTGCATAAA+TGG | + | chr8.3:78207265-78207284 | MS.gene45646:intron | 35.0% | |
| TTTGCCGACAGAAAGTTATA+TGG | + | chr8.3:78206626-78206645 | MS.gene45646:CDS | 35.0% | |
| ! | AAACAGTGCAAGTATTGTCA+TGG | - | chr8.3:78206305-78206324 | None:intergenic | 35.0% |
| ! | AAATCAGTCTACCTCTTTTC+AGG | + | chr8.3:78204421-78204440 | MS.gene45646:CDS | 35.0% |
| ! | AACAACATTAAGGGCATGTT+TGG | - | chr8.3:78204319-78204338 | None:intergenic | 35.0% |
| ! | AGTATGTTTGAAGCCAAACT+TGG | + | chr8.3:78204225-78204244 | MS.gene45646:intron | 35.0% |
| ! | GCAGAAATTCATGTTTCTGA+AGG | - | chr8.3:78205713-78205732 | None:intergenic | 35.0% |
| ! | GTTTGGCTTCAAACATACTT+TGG | - | chr8.3:78204224-78204243 | None:intergenic | 35.0% |
| ! | TGACAATACTTGCACTGTTT+TGG | + | chr8.3:78206305-78206324 | MS.gene45646:intron | 35.0% |
| ! | TGCCGAAGGTATATAATACT+TGG | + | chr8.3:78205041-78205060 | MS.gene45646:intron | 35.0% |
| ! | TGTGCTAGTGTTTTCTTCAA+GGG | + | chr8.3:78206734-78206753 | MS.gene45646:intron | 35.0% |
| ! | TTGATAGTCTTTGCATAGTC+GGG | - | chr8.3:78206967-78206986 | None:intergenic | 35.0% |
| ! | TTTCTGCAATTTTACGAGGT+CGG | + | chr8.3:78205446-78205465 | MS.gene45646:intron | 35.0% |
| !! | AAGGAGAGTGAAAAAGTATC+AGG | + | chr8.3:78204192-78204211 | MS.gene45646:intron | 35.0% |
| !! | AGGAGAGTGAAAAAGTATCA+GGG | + | chr8.3:78204193-78204212 | MS.gene45646:intron | 35.0% |
| !! | ATCATGCCTATCTTTGGTTT+TGG | - | chr8.3:78204805-78204824 | None:intergenic | 35.0% |
| !! | TAACGGACTTGTTTGCTTAT+AGG | + | chr8.3:78204254-78204273 | MS.gene45646:intron | 35.0% |
| !! | TTATATTTTTGTGCAGGCTG+AGG | + | chr8.3:78205337-78205356 | MS.gene45646:intron | 35.0% |
| !!! | CCTCGGCTTTCTTTATTTTT+CGG | - | chr8.3:78204738-78204757 | None:intergenic | 35.0% |
| !!! | CTGTTTTGGTCTAATTACTC+AGG | + | chr8.3:78206319-78206338 | MS.gene45646:intron | 35.0% |
| !!! | GTTGCTACTTTTGTATGGTA+GGG | + | chr8.3:78204336-78204355 | MS.gene45646:intron | 35.0% |
| !!! | TGTTGCTACTTTTGTATGGT+AGG | + | chr8.3:78204335-78204354 | MS.gene45646:intron | 35.0% |
| !!! | TTGCTACTTTTGTATGGTAG+GGG | + | chr8.3:78204337-78204356 | MS.gene45646:intron | 35.0% |
| !!! | TTTGTTATTCCTGCTTTTGG+TGG | + | chr8.3:78206362-78206381 | MS.gene45646:CDS | 35.0% |
| AAAAGAAACATCTGCTGGTG+TGG | + | chr8.3:78207095-78207114 | MS.gene45646:intron | 40.0% | |
| AAAAGGTCAAGGGAACTCAT+CGG | + | chr8.3:78204632-78204651 | MS.gene45646:CDS | 40.0% | |
| AAGCGGAAGAATTTCCTTTC+TGG | - | chr8.3:78207007-78207026 | None:intergenic | 40.0% | |
| AAGTGGAGTCCAAGCAAAAA+GGG | + | chr8.3:78205865-78205884 | MS.gene45646:CDS | 40.0% | |
| ACAGCCTAAGAAAAAGGTCA+AGG | + | chr8.3:78204621-78204640 | MS.gene45646:CDS | 40.0% | |
| AGGGTTATACAAAGCCATGA+CGG | + | chr8.3:78207200-78207219 | MS.gene45646:CDS | 40.0% | |
| ATGATGTCTGGTAGAAACAG+AGG | + | chr8.3:78207180-78207199 | MS.gene45646:CDS | 40.0% | |
| ATGCTGCAAAATTTGTCACC+AGG | + | chr8.3:78204376-78204395 | MS.gene45646:CDS | 40.0% | |
| ATTGGACGACTGTCTTACAA+TGG | + | chr8.3:78204953-78204972 | MS.gene45646:CDS | 40.0% | |
| CAAATGCCACAATTGATACC+TGG | - | chr8.3:78205268-78205287 | None:intergenic | 40.0% | |
| CAAGTGCATCCACAAATCTT+GGG | - | chr8.3:78204929-78204948 | None:intergenic | 40.0% | |
| CAGCCTAAGAAAAAGGTCAA+GGG | + | chr8.3:78204622-78204641 | MS.gene45646:CDS | 40.0% | |
| CCCACCATATAACTTTCTGT+CGG | - | chr8.3:78206633-78206652 | None:intergenic | 40.0% | |
| CCGAAAAATAAAGAAAGCCG+AGG | + | chr8.3:78204735-78204754 | MS.gene45646:CDS | 40.0% | |
| CCGACAGAAAGTTATATGGT+GGG | + | chr8.3:78206630-78206649 | MS.gene45646:CDS | 40.0% | |
| CTTAGCAGGTGAAGATGAAA+AGG | + | chr8.3:78205986-78206005 | MS.gene45646:CDS | 40.0% | |
| CTTTGCAACCATTTATGCAG+AGG | - | chr8.3:78207276-78207295 | None:intergenic | 40.0% | |
| GAGAATATGTTCAACCACAG+TGG | + | chr8.3:78206574-78206593 | MS.gene45646:CDS | 40.0% | |
| GCTCTAGCGTTGTTTATGTT+TGG | + | chr8.3:78204007-78204026 | MS.gene45646:intron | 40.0% | |
| GGAACATCAAAAACGGCAAA+AGG | + | chr8.3:78204173-78204192 | MS.gene45646:intron | 40.0% | |
| GGCTTCAAACATACTTTGGA+TGG | - | chr8.3:78204220-78204239 | None:intergenic | 40.0% | |
| GTGTTTGCCAAGACTATCAA+AGG | - | chr8.3:78206081-78206100 | None:intergenic | 40.0% | |
| GTTCTATGTTCTTCCAGCAA+AGG | - | chr8.3:78204700-78204719 | None:intergenic | 40.0% | |
| TATCTCGTACTCACAAGTTG+AGG | + | chr8.3:78205210-78205229 | MS.gene45646:CDS | 40.0% | |
| TGATGTCTGGTAGAAACAGA+GGG | + | chr8.3:78207181-78207200 | MS.gene45646:CDS | 40.0% | |
| TGTATGGTAGGGGAAGAAAA+AGG | + | chr8.3:78204347-78204366 | MS.gene45646:intron | 40.0% | |
| TTGAGGGTCAGACAATAACA+TGG | + | chr8.3:78205360-78205379 | MS.gene45646:CDS | 40.0% | |
| TTGCTAGATTGGCACATGAA+TGG | + | chr8.3:78205177-78205196 | MS.gene45646:intron | 40.0% | |
| TTTGTCGTAGCAATCTTGGT+TGG | + | chr8.3:78206709-78206728 | MS.gene45646:intron | 40.0% | |
| ! | ATTTTCTTGTTCTCTGACGC+AGG | - | chr8.3:78204999-78205018 | None:intergenic | 40.0% |
| ! | CAGAAAGTTATATGGTGGGA+AGG | + | chr8.3:78206634-78206653 | MS.gene45646:CDS | 40.0% |
| ! | GAATCTTCTTTTCCAACACC+AGG | - | chr8.3:78207030-78207049 | None:intergenic | 40.0% |
| ! | GTAAGACCCTTTGATAGTCT+TGG | + | chr8.3:78206071-78206090 | MS.gene45646:intron | 40.0% |
| ! | GTGTGCTAGTGTTTTCTTCA+AGG | + | chr8.3:78206733-78206752 | MS.gene45646:intron | 40.0% |
| ! | GTTCCCTTGACCTTTTTCTT+AGG | - | chr8.3:78204628-78204647 | None:intergenic | 40.0% |
| ! | GTTTGAAGCCAAACTTGGTT+TGG | + | chr8.3:78204230-78204249 | MS.gene45646:intron | 40.0% |
| ! | TGACCTTTTTCTTAGGCTGT+CGG | - | chr8.3:78204621-78204640 | None:intergenic | 40.0% |
| ! | TGCTTACCTGTTTGCTAGAT+TGG | + | chr8.3:78205166-78205185 | MS.gene45646:intron | 40.0% |
| !! | ACCATTCATCGTTGATTCTC+CGG | - | chr8.3:78207127-78207146 | None:intergenic | 40.0% |
| !! | CTGTTTCTACCAGACATCAT+AGG | - | chr8.3:78207180-78207199 | None:intergenic | 40.0% |
| AAAACCACGGACTTGCAAAC+AGG | + | chr8.3:78204764-78204783 | MS.gene45646:CDS | 45.0% | |
| AAGGAAATTCTTCCGCTTCC+TGG | + | chr8.3:78207009-78207028 | MS.gene45646:CDS | 45.0% | |
| AATTGCCACAGCCTCTTCTT+CGG | + | chr8.3:78205580-78205599 | MS.gene45646:intron | 45.0% | |
| ACAAAAGGTGACAAGTGAGG+TGG | - | chr8.3:78206919-78206938 | None:intergenic | 45.0% | |
| ACCGGAGAATCAACGATGAA+TGG | + | chr8.3:78207123-78207142 | MS.gene45646:CDS | 45.0% | |
| AGACTGATCGCATCAAACAG+CGG | + | chr8.3:78207406-78207425 | MS.gene45646:CDS | 45.0% | |
| AGCTTCAAGTATCAGTCCAG+AGG | - | chr8.3:78205823-78205842 | None:intergenic | 45.0% | |
| AGTGGAGTCCAAGCAAAAAG+GGG | + | chr8.3:78205866-78205885 | MS.gene45646:CDS | 45.0% | |
| ATGGTAGGGGAAGAAAAAGG+AGG | + | chr8.3:78204350-78204369 | MS.gene45646:intron | 45.0% | |
| CAAGTGGAGTCCAAGCAAAA+AGG | + | chr8.3:78205864-78205883 | MS.gene45646:CDS | 45.0% | |
| CATGTGCCAATCTAGCAAAC+AGG | - | chr8.3:78205175-78205194 | None:intergenic | 45.0% | |
| CCAAGATTTGTGGATGCACT+TGG | + | chr8.3:78204927-78204946 | MS.gene45646:CDS | 45.0% | |
| CCAAGTGCATCCACAAATCT+TGG | - | chr8.3:78204930-78204949 | None:intergenic | 45.0% | |
| GCCGACAGAAAGTTATATGG+TGG | + | chr8.3:78206629-78206648 | MS.gene45646:CDS | 45.0% | |
| GCTTCAAGTATCAGTCCAGA+GGG | - | chr8.3:78205822-78205841 | None:intergenic | 45.0% | |
| GGGATCATGATATCTTCGTG+TGG | + | chr8.3:78206754-78206773 | MS.gene45646:intron | 45.0% | |
| TAGACGAAGCTAAGGGTCAA+AGG | + | chr8.3:78207439-78207458 | MS.gene45646:CDS | 45.0% | |
| TAGGCATGATTATTCGGCAG+AGG | + | chr8.3:78204815-78204834 | MS.gene45646:CDS | 45.0% | |
| TCCGTTAGCCAAACCAAGTT+TGG | - | chr8.3:78204241-78204260 | None:intergenic | 45.0% | |
| TCTTCATCACGAACCTTTGC+TGG | + | chr8.3:78204684-78204703 | MS.gene45646:CDS | 45.0% | |
| TGGTAGGGGAAGAAAAAGGA+GGG | + | chr8.3:78204351-78204370 | MS.gene45646:intron | 45.0% | |
| TGTGGATGCACTTGGAGAAT+TGG | + | chr8.3:78204935-78204954 | MS.gene45646:CDS | 45.0% | |
| TTTCTTGAGTGCTTGTGTCC+TGG | - | chr8.3:78204397-78204416 | None:intergenic | 45.0% | |
| ! | ACCTTTTTCTTAGGCTGTCG+GGG | - | chr8.3:78204619-78204638 | None:intergenic | 45.0% |
| ! | GACCTTTTTCTTAGGCTGTC+GGG | - | chr8.3:78204620-78204639 | None:intergenic | 45.0% |
| ! | GGTGAAAGGCATATACTACC+AGG | + | chr8.3:78205247-78205266 | MS.gene45646:CDS | 45.0% |
| ! | TAAACTTGGAGTATCCTCCC+AGG | + | chr8.3:78205631-78205650 | MS.gene45646:CDS | 45.0% |
| ! | TCCGTGGTTTTTCTTTGCCT+CGG | - | chr8.3:78204755-78204774 | None:intergenic | 45.0% |
| ! | TCTTTTCCAACACCAGGAAG+CGG | - | chr8.3:78207024-78207043 | None:intergenic | 45.0% |
| ! | TGATCAGAGCATTACTCACC+AGG | + | chr8.3:78206427-78206446 | MS.gene45646:CDS | 45.0% |
| !! | GCCAAACTTGGTTTGGCTAA+CGG | + | chr8.3:78204237-78204256 | MS.gene45646:intron | 45.0% |
| !! | TTTTGGTGGCACCGTTTCAT+GGG | + | chr8.3:78206376-78206395 | MS.gene45646:CDS | 45.0% |
| AAAGGTGACAAGTGAGGTGG+AGG | - | chr8.3:78206916-78206935 | None:intergenic | 50.0% | |
| ACAAACCGAAGAAGAGGCTG+TGG | - | chr8.3:78205588-78205607 | None:intergenic | 50.0% | |
| ACCCCGACAGCCTAAGAAAA+AGG | + | chr8.3:78204615-78204634 | MS.gene45646:CDS | 50.0% | |
| ACCGTTTCATGGGAGGGAAA+GGG | + | chr8.3:78206386-78206405 | MS.gene45646:CDS | 50.0% | |
| AGCTCGTACACAAATGCCGA+AGG | + | chr8.3:78205027-78205046 | MS.gene45646:CDS | 50.0% | |
| ATCCTCCCAGGCTTGATACT+CGG | + | chr8.3:78205643-78205662 | MS.gene45646:CDS | 50.0% | |
| ATTCTTCCGCTTCCTGGTGT+TGG | + | chr8.3:78207015-78207034 | MS.gene45646:CDS | 50.0% | |
| ATTGTTGACAGGGATGCGCA+AGG | + | chr8.3:78206534-78206553 | MS.gene45646:CDS | 50.0% | |
| GCCGAGGCAAAGAAAAACCA+CGG | + | chr8.3:78204751-78204770 | MS.gene45646:CDS | 50.0% | |
| TCCAACCGAGTATCAAGCCT+GGG | - | chr8.3:78205651-78205670 | None:intergenic | 50.0% | |
| TCCAAGCAAAAAGGGGCAGA+TGG | + | chr8.3:78205873-78205892 | MS.gene45646:CDS | 50.0% | |
| TGCACTAATGCACCTGGTTG+AGG | + | chr8.3:78205962-78205981 | MS.gene45646:CDS | 50.0% | |
| TTCCAACCGAGTATCAAGCC+TGG | - | chr8.3:78205652-78205671 | None:intergenic | 50.0% | |
| TTTGTGCAGGCTGAGGTTGA+GGG | + | chr8.3:78205344-78205363 | MS.gene45646:intron | 50.0% | |
| ! | ACCATCTGCCCCTTTTTGCT+TGG | - | chr8.3:78205877-78205896 | None:intergenic | 50.0% |
| ! | TTTTGTGCAGGCTGAGGTTG+AGG | + | chr8.3:78205343-78205362 | MS.gene45646:intron | 50.0% |
| !! | CTTTTGGTGGCACCGTTTCA+TGG | + | chr8.3:78206375-78206394 | MS.gene45646:CDS | 50.0% |
| AACCGAGTATCAAGCCTGGG+AGG | - | chr8.3:78205648-78205667 | None:intergenic | 55.0% | |
| ACCAGGTGCATTAGTGCACC+AGG | - | chr8.3:78205960-78205979 | None:intergenic | 55.0% | |
| ACCTGGTGCACTAATGCACC+TGG | + | chr8.3:78205956-78205975 | MS.gene45646:CDS | 55.0% | |
| CACCGTTTCATGGGAGGGAA+AGG | + | chr8.3:78206385-78206404 | MS.gene45646:CDS | 55.0% | |
| CACCTGCTAAGTCCTCAACC+AGG | - | chr8.3:78205977-78205996 | None:intergenic | 55.0% | |
| CACCTGGTTGAGGACTTAGC+AGG | + | chr8.3:78205972-78205991 | MS.gene45646:CDS | 55.0% | |
| CCCCTTTCCCTCCCATGAAA+CGG | - | chr8.3:78206390-78206409 | None:intergenic | 55.0% | |
| CCGTTTCATGGGAGGGAAAG+GGG | + | chr8.3:78206387-78206406 | MS.gene45646:CDS | 55.0% | |
| CGGACTTGCAAACAGGCTAC+TGG | + | chr8.3:78204771-78204790 | MS.gene45646:CDS | 55.0% | |
| CGTTTCATGGGAGGGAAAGG+GGG | + | chr8.3:78206388-78206407 | MS.gene45646:CDS | 55.0% | |
| CTTGCAAGCTGCTGCCAGAA+AGG | + | chr8.3:78206990-78207009 | MS.gene45646:CDS | 55.0% | |
| GTAGCCTGTTTGCAAGTCCG+TGG | - | chr8.3:78204771-78204790 | None:intergenic | 55.0% | |
| TCCCAGGCTTGATACTCGGT+TGG | + | chr8.3:78205647-78205666 | MS.gene45646:CDS | 55.0% | |
| TCTGCTGGTGTGGTACAGAC+CGG | + | chr8.3:78207105-78207124 | MS.gene45646:CDS | 55.0% | |
| ! | TCCAGAGGGTTTGCTCGCAT+TGG | - | chr8.3:78205808-78205827 | None:intergenic | 55.0% |
| !! | GAAACGGTGCCACCAAAAGC+AGG | - | chr8.3:78206374-78206393 | None:intergenic | 55.0% |
| ACAGGGATGCGCAAGGCCAT+AGG | + | chr8.3:78206541-78206560 | MS.gene45646:CDS | 60.0% | |
| CGGTTGGAAGCTTTCGCAGC+AGG | + | chr8.3:78205663-78205682 | MS.gene45646:CDS | 60.0% | |
| GCCAATGCGAGCAAACCCTC+TGG | + | chr8.3:78205804-78205823 | MS.gene45646:CDS | 60.0% | |
| GGTGGCACCGTTTCATGGGA+GGG | + | chr8.3:78206380-78206399 | MS.gene45646:CDS | 60.0% | |
| TGGTGGCACCGTTTCATGGG+AGG | + | chr8.3:78206379-78206398 | MS.gene45646:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 78203788 | 78207467 | 78203788 | ID=MS.gene45646 |
| chr8.3 | mRNA | 78203788 | 78207467 | 78203788 | ID=MS.gene45646.t1;Parent=MS.gene45646 |
| chr8.3 | exon | 78203788 | 78203814 | 78203788 | ID=MS.gene45646.t1.exon1;Parent=MS.gene45646.t1 |
| chr8.3 | CDS | 78203788 | 78203814 | 78203788 | ID=cds.MS.gene45646.t1;Parent=MS.gene45646.t1 |
| chr8.3 | exon | 78204357 | 78204442 | 78204357 | ID=MS.gene45646.t1.exon2;Parent=MS.gene45646.t1 |
| chr8.3 | CDS | 78204357 | 78204442 | 78204357 | ID=cds.MS.gene45646.t1;Parent=MS.gene45646.t1 |
| chr8.3 | exon | 78204588 | 78204836 | 78204588 | ID=MS.gene45646.t1.exon3;Parent=MS.gene45646.t1 |
| chr8.3 | CDS | 78204588 | 78204836 | 78204588 | ID=cds.MS.gene45646.t1;Parent=MS.gene45646.t1 |
| chr8.3 | exon | 78204923 | 78205048 | 78204923 | ID=MS.gene45646.t1.exon4;Parent=MS.gene45646.t1 |
| chr8.3 | CDS | 78204923 | 78205048 | 78204923 | ID=cds.MS.gene45646.t1;Parent=MS.gene45646.t1 |
| chr8.3 | exon | 78205184 | 78205268 | 78205184 | ID=MS.gene45646.t1.exon5;Parent=MS.gene45646.t1 |
| chr8.3 | CDS | 78205184 | 78205268 | 78205184 | ID=cds.MS.gene45646.t1;Parent=MS.gene45646.t1 |
| chr8.3 | exon | 78205353 | 78205463 | 78205353 | ID=MS.gene45646.t1.exon6;Parent=MS.gene45646.t1 |
| chr8.3 | CDS | 78205353 | 78205463 | 78205353 | ID=cds.MS.gene45646.t1;Parent=MS.gene45646.t1 |
| chr8.3 | exon | 78205591 | 78205684 | 78205591 | ID=MS.gene45646.t1.exon7;Parent=MS.gene45646.t1 |
| chr8.3 | CDS | 78205591 | 78205684 | 78205591 | ID=cds.MS.gene45646.t1;Parent=MS.gene45646.t1 |
| chr8.3 | exon | 78205781 | 78206070 | 78205781 | ID=MS.gene45646.t1.exon8;Parent=MS.gene45646.t1 |
| chr8.3 | CDS | 78205781 | 78206070 | 78205781 | ID=cds.MS.gene45646.t1;Parent=MS.gene45646.t1 |
| chr8.3 | exon | 78206341 | 78206448 | 78206341 | ID=MS.gene45646.t1.exon9;Parent=MS.gene45646.t1 |
| chr8.3 | CDS | 78206341 | 78206448 | 78206341 | ID=cds.MS.gene45646.t1;Parent=MS.gene45646.t1 |
| chr8.3 | exon | 78206534 | 78206655 | 78206534 | ID=MS.gene45646.t1.exon10;Parent=MS.gene45646.t1 |
| chr8.3 | CDS | 78206534 | 78206655 | 78206534 | ID=cds.MS.gene45646.t1;Parent=MS.gene45646.t1 |
| chr8.3 | exon | 78206909 | 78207057 | 78206909 | ID=MS.gene45646.t1.exon11;Parent=MS.gene45646.t1 |
| chr8.3 | CDS | 78206909 | 78207057 | 78206909 | ID=cds.MS.gene45646.t1;Parent=MS.gene45646.t1 |
| chr8.3 | exon | 78207100 | 78207221 | 78207100 | ID=MS.gene45646.t1.exon12;Parent=MS.gene45646.t1 |
| chr8.3 | CDS | 78207100 | 78207221 | 78207100 | ID=cds.MS.gene45646.t1;Parent=MS.gene45646.t1 |
| chr8.3 | exon | 78207381 | 78207467 | 78207381 | ID=MS.gene45646.t1.exon13;Parent=MS.gene45646.t1 |
| chr8.3 | CDS | 78207381 | 78207467 | 78207381 | ID=cds.MS.gene45646.t1;Parent=MS.gene45646.t1 |
| Gene Sequence |
| Protein sequence |
