Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07704.t1 | XP_003606254.1 | 95.7 | 162 | 7 | 0 | 1 | 162 | 1 | 162 | 1.40E-80 | 308.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07704.t1 | O22165 | 68.7 | 163 | 46 | 2 | 1 | 162 | 1 | 159 | 1.4e-57 | 223.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07704.t1 | B7FMU0 | 95.7 | 162 | 7 | 0 | 1 | 162 | 1 | 162 | 9.9e-81 | 308.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05188 | MS.gene07704 | 0.801077 | 1.07E-48 | -1.69E-46 |
| MS.gene051903 | MS.gene07704 | 0.83235 | 9.94E-56 | -1.69E-46 |
| MS.gene052947 | MS.gene07704 | 0.826874 | 2.14E-54 | -1.69E-46 |
| MS.gene055555 | MS.gene07704 | 0.811061 | 8.45E-51 | -1.69E-46 |
| MS.gene06011 | MS.gene07704 | 0.806152 | 9.45E-50 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07704.t1 | MTR_4g055270 | 95.679 | 162 | 7 | 0 | 1 | 162 | 1 | 162 | 2.10e-109 | 308 |
| MS.gene07704.t1 | MTR_2g084925 | 77.160 | 162 | 36 | 1 | 1 | 162 | 1 | 161 | 4.17e-87 | 252 |
| MS.gene07704.t1 | MTR_1g061670 | 36.842 | 95 | 58 | 1 | 1 | 95 | 3 | 95 | 1.41e-18 | 78.2 |
| MS.gene07704.t1 | MTR_7g103320 | 36.842 | 95 | 58 | 1 | 1 | 95 | 3 | 95 | 1.76e-18 | 77.8 |
| MS.gene07704.t1 | MTR_7g103320 | 36.842 | 95 | 58 | 1 | 1 | 95 | 3 | 95 | 1.76e-18 | 77.8 |
| MS.gene07704.t1 | MTR_7g103320 | 36.842 | 95 | 58 | 1 | 1 | 95 | 3 | 95 | 1.76e-18 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07704.t1 | AT2G44860 | 68.712 | 163 | 46 | 2 | 1 | 162 | 1 | 159 | 7.42e-80 | 234 |
| MS.gene07704.t1 | AT2G44860 | 68.712 | 163 | 46 | 2 | 1 | 162 | 1 | 159 | 7.42e-80 | 234 |
| MS.gene07704.t1 | AT3G53020 | 36.842 | 95 | 58 | 1 | 1 | 95 | 3 | 95 | 1.20e-17 | 75.9 |
| MS.gene07704.t1 | AT2G36620 | 36.842 | 95 | 58 | 1 | 1 | 95 | 3 | 95 | 3.37e-17 | 74.7 |
Find 46 sgRNAs with CRISPR-Local
Find 135 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTGGATCTTAGCAATCTT+TGG | 0.263538 | 4.1:-43034509 | None:intergenic |
| GGAATCCTCGGAAAGTAAAA+TGG | 0.330997 | 4.1:+43034260 | MS.gene07704:CDS |
| ACGATTCTCCTCTGCTTGTT+GGG | 0.350782 | 4.1:-43034775 | None:intergenic |
| CACGATTCTCCTCTGCTTGT+TGG | 0.372186 | 4.1:-43034776 | None:intergenic |
| GTGATTCACCCCTGCTGGCT+TGG | 0.391988 | 4.1:-43034526 | None:intergenic |
| CAGATGGAGCTTTAAGTAGA+TGG | 0.394379 | 4.1:-43034716 | None:intergenic |
| GTGAATCACACTACGCTAAC+AGG | 0.427056 | 4.1:+43034540 | MS.gene07704:CDS |
| TCTACTGTATATCCTGGTCA+TGG | 0.437777 | 4.1:+43032652 | MS.gene07704:CDS |
| TAAAATGGACCAAGGCATAT+AGG | 0.453354 | 4.1:+43034275 | MS.gene07704:CDS |
| TAGCATCATTACGAACAAAC+TGG | 0.456216 | 4.1:-43032678 | None:intergenic |
| TGTTCTTCTACTGTATATCC+TGG | 0.466156 | 4.1:+43032646 | MS.gene07704:CDS |
| TCCATCTGCTGTGCTTGCGC+CGG | 0.476430 | 4.1:+43034731 | MS.gene07704:CDS |
| GTGCACCCGCCTATATGCCT+TGG | 0.497127 | 4.1:-43034284 | None:intergenic |
| TTGCTAAGATCCAAGCCAGC+AGG | 0.500416 | 4.1:+43034516 | MS.gene07704:CDS |
| GATCTTAGCAATCTTTGGAA+TGG | 0.502280 | 4.1:-43034504 | None:intergenic |
| AGATTCCTGTCGTATCTCTC+AGG | 0.514561 | 4.1:-43034461 | None:intergenic |
| TCCGGCGCAAGCACAGCAGA+TGG | 0.523709 | 4.1:-43034732 | None:intergenic |
| AAATGAGATTAGAGAAGTGT+TGG | 0.527939 | 4.1:+43032620 | None:intergenic |
| ACCGCCACCTTGATCTTCTC+CGG | 0.535052 | 4.1:-43034750 | None:intergenic |
| CAAGAAGCAGAAGGTGCAGA+AGG | 0.543186 | 4.1:+43034665 | MS.gene07704:CDS |
| GCAGAAGGTGCAGAAGGAAG+CGG | 0.549263 | 4.1:+43034671 | MS.gene07704:CDS |
| GTAGTGTGATTCACCCCTGC+TGG | 0.551585 | 4.1:-43034531 | None:intergenic |
| CTACTGTATATCCTGGTCAT+GGG | 0.555707 | 4.1:+43032653 | MS.gene07704:CDS |
| TCAAAATGAAGAGGAATCCT+CGG | 0.559408 | 4.1:+43034248 | MS.gene07704:CDS |
| GTTTGTTCGTAATGATGCTA+AGG | 0.562939 | 4.1:+43032681 | MS.gene07704:CDS |
| ACAAGAACTTCAAAATGAAG+AGG | 0.570899 | 4.1:+43034239 | MS.gene07704:CDS |
| CAATCTTTGGAATGGCCTTG+AGG | 0.574848 | 4.1:-43034496 | None:intergenic |
| GCTTGCGCCGGAGAAGATCA+AGG | 0.582872 | 4.1:+43034743 | MS.gene07704:CDS |
| GCCGGAGAAGATCAAGGTGG+CGG | 0.584956 | 4.1:+43034749 | MS.gene07704:CDS |
| GGCGGTTTCCCAACAAGCAG+AGG | 0.588475 | 4.1:+43034767 | MS.gene07704:CDS |
| AAGGCATATAGGCGGGTGCA+CGG | 0.588735 | 4.1:+43034286 | MS.gene07704:CDS |
| ATGGACCAAGGCATATAGGC+GGG | 0.589542 | 4.1:+43034279 | MS.gene07704:CDS |
| ATATAGGCGGGTGCACGGAA+AGG | 0.591224 | 4.1:+43034291 | MS.gene07704:CDS |
| GATGAGCGGCAAGAAGCAGA+AGG | 0.613802 | 4.1:+43034656 | MS.gene07704:CDS |
| TGCTAAGATCCAAGCCAGCA+GGG | 0.615872 | 4.1:+43034517 | MS.gene07704:CDS |
| TCTTACTGAGGAAGTCCTCA+AGG | 0.619553 | 4.1:+43034481 | MS.gene07704:CDS |
| AGCAGAGGAGAATCGTGTCA+TGG | 0.619555 | 4.1:+43034782 | MS.gene07704:CDS |
| ACAAACTGGATCCCATGACC+AGG | 0.640213 | 4.1:-43032664 | None:intergenic |
| ACAGACCTGAGAGATACGAC+AGG | 0.640425 | 4.1:+43034456 | MS.gene07704:CDS |
| TTAATCTCCCATAGGATGAG+CGG | 0.649799 | 4.1:+43034642 | MS.gene07704:intron |
| GCTAAGATCCAAGCCAGCAG+GGG | 0.666858 | 4.1:+43034518 | MS.gene07704:CDS |
| AATGGACCAAGGCATATAGG+CGG | 0.680334 | 4.1:+43034278 | MS.gene07704:CDS |
| TCGGAAAGTAAAATGGACCA+AGG | 0.688428 | 4.1:+43034267 | MS.gene07704:CDS |
| GCACGGAAAGGACATGACAC+AGG | 0.700411 | 4.1:+43034303 | MS.gene07704:CDS |
| ATACGACAGGAATCTTACTG+AGG | 0.719986 | 4.1:+43034469 | MS.gene07704:CDS |
| TGCGCCGGAGAAGATCAAGG+TGG | 0.789068 | 4.1:+43034746 | MS.gene07704:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTACATATAAAAGATAAATA+AGG | - | chr4.1:43034108-43034127 | None:intergenic | 10.0% |
| !!! | AAATTTTTGAAAATTAATAG+CGG | + | chr4.1:43032758-43032777 | MS.gene07704:intron | 10.0% |
| !!! | ATTTATCTTTTATATGTAAA+TGG | + | chr4.1:43034109-43034128 | MS.gene07704:intron | 10.0% |
| !!! | TTTTATATATAATTGACTTA+GGG | + | chr4.1:43033338-43033357 | MS.gene07704:intron | 10.0% |
| !! | CTAAGTCAATTATATATAAA+AGG | - | chr4.1:43033339-43033358 | None:intergenic | 15.0% |
| !!! | ATTACTTTTACATATACAAT+AGG | - | chr4.1:43032952-43032971 | None:intergenic | 15.0% |
| !!! | ATTATGCTAATTTTGTTATT+AGG | + | chr4.1:43033092-43033111 | MS.gene07704:intron | 15.0% |
| !!! | CTTTTATATATAATTGACTT+AGG | + | chr4.1:43033337-43033356 | MS.gene07704:intron | 15.0% |
| !!! | TTATGCTAATTTTGTTATTA+GGG | + | chr4.1:43033093-43033112 | MS.gene07704:intron | 15.0% |
| !! | AAAAACTTATACTAAAGCTT+TGG | - | chr4.1:43034597-43034616 | None:intergenic | 20.0% |
| !! | AAAACTTATACTAAAGCTTT+GGG | - | chr4.1:43034596-43034615 | None:intergenic | 20.0% |
| !!! | ACTTTTTACGTTTTTGTTTT+AGG | + | chr4.1:43034403-43034422 | MS.gene07704:intron | 20.0% |
| !!! | ATCTTTTATATGTAAATGGA+AGG | + | chr4.1:43034113-43034132 | MS.gene07704:intron | 20.0% |
| !!! | TAGTGAATTTTGATGAATTA+AGG | + | chr4.1:43032799-43032818 | MS.gene07704:intron | 20.0% |
| !!! | TATTTTGCTCATTTATGAAT+CGG | + | chr4.1:43033247-43033266 | MS.gene07704:intron | 20.0% |
| !!! | TTTTCAAAATGAGTTGAAAA+AGG | - | chr4.1:43033467-43033486 | None:intergenic | 20.0% |
| ! | AATAAGTTGTTTATCCAAAC+AGG | + | chr4.1:43033047-43033066 | MS.gene07704:intron | 25.0% |
| ! | ACAAAATTAGCATAATGTAG+TGG | - | chr4.1:43033088-43033107 | None:intergenic | 25.0% |
| ! | AGCTAAATAAACTGGAATAA+TGG | - | chr4.1:43033128-43033147 | None:intergenic | 25.0% |
| ! | ATAACTTATCAAAAATCAGC+AGG | - | chr4.1:43032902-43032921 | None:intergenic | 25.0% |
| ! | ATAATGAGACTAGGAAATTA+AGG | - | chr4.1:43034347-43034366 | None:intergenic | 25.0% |
| ! | GAGAATTTAGAGATTTAGAT+GGG | + | chr4.1:43033940-43033959 | MS.gene07704:intron | 25.0% |
| ! | GATTCATAAATGAGCAAAAT+AGG | - | chr4.1:43033248-43033267 | None:intergenic | 25.0% |
| ! | GGATAATCAATAAACTAAAC+AGG | - | chr4.1:43034087-43034106 | None:intergenic | 25.0% |
| ! | GTTGCGTATACATAAATAAA+TGG | - | chr4.1:43033312-43033331 | None:intergenic | 25.0% |
| ! | TAATGAGACTAGGAAATTAA+GGG | - | chr4.1:43034346-43034365 | None:intergenic | 25.0% |
| ! | TTATTTATGTATACGCAACA+TGG | + | chr4.1:43033313-43033332 | MS.gene07704:intron | 25.0% |
| !!! | TTTTGAAGTTTTGTGAAACT+AGG | + | chr4.1:43033782-43033801 | MS.gene07704:intron | 25.0% |
| AAAATTAATAGCGGTGATAG+AGG | + | chr4.1:43032767-43032786 | MS.gene07704:intron | 30.0% | |
| AAATTAATAGCGGTGATAGA+GGG | + | chr4.1:43032768-43032787 | MS.gene07704:intron | 30.0% | |
| AATTAAGGATCTGTTTGGAT+TGG | + | chr4.1:43032814-43032833 | MS.gene07704:intron | 30.0% | |
| ACAAGAACTTCAAAATGAAG+AGG | + | chr4.1:43034239-43034258 | MS.gene07704:CDS | 30.0% | |
| ATCAACACAATAATGAGACT+AGG | - | chr4.1:43034356-43034375 | None:intergenic | 30.0% | |
| CGAGAATTTAGAGATTTAGA+TGG | + | chr4.1:43033939-43033958 | MS.gene07704:intron | 30.0% | |
| GCAAAGTTGTTTATCCAAAT+AGG | + | chr4.1:43033582-43033601 | MS.gene07704:intron | 30.0% | |
| TCAAATAAGTCATTCCAAAC+AGG | - | chr4.1:43033364-43033383 | None:intergenic | 30.0% | |
| TGATGAATTAAGGATCTGTT+TGG | + | chr4.1:43032809-43032828 | MS.gene07704:intron | 30.0% | |
| TGTTATAGCTCTTGTTGAAT+TGG | + | chr4.1:43032722-43032741 | MS.gene07704:intron | 30.0% | |
| ! | ATGTAGTGGTTTTCATACTT+AGG | - | chr4.1:43033074-43033093 | None:intergenic | 30.0% |
| ! | ATTTTGTGATCCAGATTGTT+TGG | - | chr4.1:43033858-43033877 | None:intergenic | 30.0% |
| ! | GCGTGAAAGAACAAAATTTT+AGG | + | chr4.1:43033170-43033189 | MS.gene07704:intron | 30.0% |
| ! | GGCTTGTGAAAATTTTCATA+AGG | - | chr4.1:43033446-43033465 | None:intergenic | 30.0% |
| ! | TGTAGTGGTTTTCATACTTA+GGG | - | chr4.1:43033073-43033092 | None:intergenic | 30.0% |
| ! | TTTTGTGATCCAGATTGTTT+GGG | - | chr4.1:43033857-43033876 | None:intergenic | 30.0% |
| !! | GCTGTTTTCATAAGTTATCT+TGG | - | chr4.1:43032930-43032949 | None:intergenic | 30.0% |
| !! | TATTGTGTTGATTACTCTCT+TGG | + | chr4.1:43034364-43034383 | MS.gene07704:intron | 30.0% |
| !!! | TCTTCATTTTGAAGTTCTTG+TGG | - | chr4.1:43034240-43034259 | None:intergenic | 30.0% |
| AATCTCTAAATTCTCGAGCA+AGG | - | chr4.1:43033935-43033954 | None:intergenic | 35.0% | |
| AATGAGCAAAATAGGTCATC+TGG | - | chr4.1:43033240-43033259 | None:intergenic | 35.0% | |
| AGACTAGGAAATTAAGGGAA+AGG | - | chr4.1:43034341-43034360 | None:intergenic | 35.0% | |
| AGGACAAAGATTTCATGTCA+GGG | - | chr4.1:43033825-43033844 | None:intergenic | 35.0% | |
| ATTGGAGTGATAAGGTGATT+TGG | - | chr4.1:43034007-43034026 | None:intergenic | 35.0% | |
| CATCAGCTAGCTAAATAAAC+TGG | - | chr4.1:43033136-43033155 | None:intergenic | 35.0% | |
| CTTATCACTCCAATCTAGAT+GGG | + | chr4.1:43034013-43034032 | MS.gene07704:intron | 35.0% | |
| GAAATAGTAGATAGTGCTAC+AGG | - | chr4.1:43033646-43033665 | None:intergenic | 35.0% | |
| GTTTGTTCGTAATGATGCTA+AGG | + | chr4.1:43032681-43032700 | MS.gene07704:CDS | 35.0% | |
| TAAAATGGACCAAGGCATAT+AGG | + | chr4.1:43034275-43034294 | MS.gene07704:CDS | 35.0% | |
| TAGCATCATTACGAACAAAC+TGG | - | chr4.1:43032681-43032700 | None:intergenic | 35.0% | |
| TAGGACAAAGATTTCATGTC+AGG | - | chr4.1:43033826-43033845 | None:intergenic | 35.0% | |
| TCAAAATGAAGAGGAATCCT+CGG | + | chr4.1:43034248-43034267 | MS.gene07704:CDS | 35.0% | |
| TCTGACATTTAATCTCCCAT+AGG | + | chr4.1:43034634-43034653 | MS.gene07704:intron | 35.0% | |
| TGTTCTTCTACTGTATATCC+TGG | + | chr4.1:43032646-43032665 | MS.gene07704:CDS | 35.0% | |
| ! | AAATACAGTGCTGTTAACAG+TGG | - | chr4.1:43033709-43033728 | None:intergenic | 35.0% |
| ! | GATAAGGTGATTTGGAGATT+TGG | - | chr4.1:43033999-43034018 | None:intergenic | 35.0% |
| ! | GATCTTAGCAATCTTTGGAA+TGG | - | chr4.1:43034507-43034526 | None:intergenic | 35.0% |
| ! | GCATAGCAATTGAAGTATCA+AGG | - | chr4.1:43033608-43033627 | None:intergenic | 35.0% |
| ! | TGTTGATTACTCTCTTGGTT+TGG | + | chr4.1:43034369-43034388 | MS.gene07704:intron | 35.0% |
| ! | TTGAAGTATCAAGGCCTATT+TGG | - | chr4.1:43033599-43033618 | None:intergenic | 35.0% |
| !! | AGTGGATTGCAGAAAAATAG+CGG | - | chr4.1:43033691-43033710 | None:intergenic | 35.0% |
| !!! | GTAGTTTTGTGAGAAGGTTT+GGG | + | chr4.1:43033404-43033423 | MS.gene07704:intron | 35.0% |
| !!! | TTTTGTTATTAGGGCGATAG+TGG | + | chr4.1:43033102-43033121 | MS.gene07704:intron | 35.0% |
| AACTTTGCAGCTTATAGCAC+AGG | - | chr4.1:43033570-43033589 | None:intergenic | 40.0% | |
| AGCTGATGTTAGTGTGTAGA+AGG | + | chr4.1:43033148-43033167 | MS.gene07704:intron | 40.0% | |
| AGTAGCTATTCACTCTCTAC+AGG | + | chr4.1:43033741-43033760 | MS.gene07704:intron | 40.0% | |
| ATACGACAGGAATCTTACTG+AGG | + | chr4.1:43034469-43034488 | MS.gene07704:CDS | 40.0% | |
| CCATCTAGATTGGAGTGATA+AGG | - | chr4.1:43034015-43034034 | None:intergenic | 40.0% | |
| CCTTATCACTCCAATCTAGA+TGG | + | chr4.1:43034012-43034031 | MS.gene07704:intron | 40.0% | |
| CTACTGTATATCCTGGTCAT+GGG | + | chr4.1:43032653-43032672 | MS.gene07704:CDS | 40.0% | |
| CTCTCTACAGGTTCTTTCTT+CGG | + | chr4.1:43033753-43033772 | MS.gene07704:intron | 40.0% | |
| GCTACACTTCACACTATATG+TGG | + | chr4.1:43034157-43034176 | MS.gene07704:intron | 40.0% | |
| GCTTGGATCTTAGCAATCTT+TGG | - | chr4.1:43034512-43034531 | None:intergenic | 40.0% | |
| GGAATCCTCGGAAAGTAAAA+TGG | + | chr4.1:43034260-43034279 | MS.gene07704:CDS | 40.0% | |
| TCGGAAAGTAAAATGGACCA+AGG | + | chr4.1:43034267-43034286 | MS.gene07704:CDS | 40.0% | |
| TCTACTGTATATCCTGGTCA+TGG | + | chr4.1:43032652-43032671 | MS.gene07704:CDS | 40.0% | |
| TTAATCTCCCATAGGATGAG+CGG | + | chr4.1:43034642-43034661 | MS.gene07704:intron | 40.0% | |
| TTGTGTCGCAGGATCAAATT+GGG | + | chr4.1:43034050-43034069 | MS.gene07704:intron | 40.0% | |
| TTTCATACTTAGGGCCTGTT+TGG | - | chr4.1:43033064-43033083 | None:intergenic | 40.0% | |
| ! | GCGTTTTCTCTCAAACTCAA+AGG | - | chr4.1:43034435-43034454 | None:intergenic | 40.0% |
| ! | TAATTGACTTAGGGCCTGTT+TGG | + | chr4.1:43033347-43033366 | MS.gene07704:intron | 40.0% |
| ! | TTGGTCCATTTTACTTTCCG+AGG | - | chr4.1:43034268-43034287 | None:intergenic | 40.0% |
| !! | CAGATGGAGCTTTAAGTAGA+TGG | - | chr4.1:43034719-43034738 | None:intergenic | 40.0% |
| !!! | ATTCGCGTAGTTTTGTGAGA+AGG | + | chr4.1:43033398-43033417 | MS.gene07704:intron | 40.0% |
| !!! | CGTAGTTTTGTGAGAAGGTT+TGG | + | chr4.1:43033403-43033422 | MS.gene07704:intron | 40.0% |
| AACTGCCTACCCAAACAATC+TGG | + | chr4.1:43033845-43033864 | MS.gene07704:intron | 45.0% | |
| AATGGACCAAGGCATATAGG+CGG | + | chr4.1:43034278-43034297 | MS.gene07704:CDS | 45.0% | |
| ACGATTCTCCTCTGCTTGTT+GGG | - | chr4.1:43034778-43034797 | None:intergenic | 45.0% | |
| AGATTCCTGTCGTATCTCTC+AGG | - | chr4.1:43034464-43034483 | None:intergenic | 45.0% | |
| CTTGTGTCGCAGGATCAAAT+TGG | + | chr4.1:43034049-43034068 | MS.gene07704:intron | 45.0% | |
| GATTGTTTGGGTAGGCAGTT+AGG | - | chr4.1:43033845-43033864 | None:intergenic | 45.0% | |
| GCAAGTAAGCCCATCTAGAT+TGG | - | chr4.1:43034025-43034044 | None:intergenic | 45.0% | |
| GTGAATCACACTACGCTAAC+AGG | + | chr4.1:43034540-43034559 | MS.gene07704:CDS | 45.0% | |
| GTGATCCAGATTGTTTGGGT+AGG | - | chr4.1:43033853-43033872 | None:intergenic | 45.0% | |
| TCTTACTGAGGAAGTCCTCA+AGG | + | chr4.1:43034481-43034500 | MS.gene07704:CDS | 45.0% | |
| !! | CAATCTTTGGAATGGCCTTG+AGG | - | chr4.1:43034499-43034518 | None:intergenic | 45.0% |
| ACAAACTGGATCCCATGACC+AGG | - | chr4.1:43032667-43032686 | None:intergenic | 50.0% | |
| ACAGACCTGAGAGATACGAC+AGG | + | chr4.1:43034456-43034475 | MS.gene07704:CDS | 50.0% | |
| AGCAGAGGAGAATCGTGTCA+TGG | + | chr4.1:43034782-43034801 | MS.gene07704:CDS | 50.0% | |
| ATGGACCAAGGCATATAGGC+GGG | + | chr4.1:43034279-43034298 | MS.gene07704:CDS | 50.0% | |
| ATGTCAGGGCTGACGATTCA+GGG | - | chr4.1:43033811-43033830 | None:intergenic | 50.0% | |
| CACGATTCTCCTCTGCTTGT+TGG | - | chr4.1:43034779-43034798 | None:intergenic | 50.0% | |
| CTTCTTGCCGCTCATCCTAT+GGG | - | chr4.1:43034652-43034671 | None:intergenic | 50.0% | |
| TGCTAAGATCCAAGCCAGCA+GGG | + | chr4.1:43034517-43034536 | MS.gene07704:CDS | 50.0% | |
| TTGATCCTGCGACACAAGTC+AGG | - | chr4.1:43034047-43034066 | None:intergenic | 50.0% | |
| TTGCTAAGATCCAAGCCAGC+AGG | + | chr4.1:43034516-43034535 | MS.gene07704:CDS | 50.0% | |
| ! | CAAGAAGCAGAAGGTGCAGA+AGG | + | chr4.1:43034665-43034684 | MS.gene07704:CDS | 50.0% |
| AAGGCATATAGGCGGGTGCA+CGG | + | chr4.1:43034286-43034305 | MS.gene07704:CDS | 55.0% | |
| ACCGCCACCTTGATCTTCTC+CGG | - | chr4.1:43034753-43034772 | None:intergenic | 55.0% | |
| ATATAGGCGGGTGCACGGAA+AGG | + | chr4.1:43034291-43034310 | MS.gene07704:CDS | 55.0% | |
| CATGTCAGGGCTGACGATTC+AGG | - | chr4.1:43033812-43033831 | None:intergenic | 55.0% | |
| GATGAGCGGCAAGAAGCAGA+AGG | + | chr4.1:43034656-43034675 | MS.gene07704:CDS | 55.0% | |
| GCACGGAAAGGACATGACAC+AGG | + | chr4.1:43034303-43034322 | MS.gene07704:CDS | 55.0% | |
| GCTAAGATCCAAGCCAGCAG+GGG | + | chr4.1:43034518-43034537 | MS.gene07704:CDS | 55.0% | |
| GCTTCTTGCCGCTCATCCTA+TGG | - | chr4.1:43034653-43034672 | None:intergenic | 55.0% | |
| GTAGTGTGATTCACCCCTGC+TGG | - | chr4.1:43034534-43034553 | None:intergenic | 55.0% | |
| TGTCAGGGCTGACGATTCAG+GGG | - | chr4.1:43033810-43033829 | None:intergenic | 55.0% | |
| ! | ACTTGCCTGACTTGTGTCGC+AGG | + | chr4.1:43034039-43034058 | MS.gene07704:intron | 55.0% |
| ! | GCAGAAGGTGCAGAAGGAAG+CGG | + | chr4.1:43034671-43034690 | MS.gene07704:CDS | 55.0% |
| GCCGGAGAAGATCAAGGTGG+CGG | + | chr4.1:43034749-43034768 | MS.gene07704:CDS | 60.0% | |
| GCTTGCGCCGGAGAAGATCA+AGG | + | chr4.1:43034743-43034762 | MS.gene07704:CDS | 60.0% | |
| GGCGGTTTCCCAACAAGCAG+AGG | + | chr4.1:43034767-43034786 | MS.gene07704:CDS | 60.0% | |
| GTGCACCCGCCTATATGCCT+TGG | - | chr4.1:43034287-43034306 | None:intergenic | 60.0% | |
| TCCATCTGCTGTGCTTGCGC+CGG | + | chr4.1:43034731-43034750 | MS.gene07704:CDS | 60.0% | |
| TGCGCCGGAGAAGATCAAGG+TGG | + | chr4.1:43034746-43034765 | MS.gene07704:CDS | 60.0% | |
| ! | GTGATTCACCCCTGCTGGCT+TGG | - | chr4.1:43034529-43034548 | None:intergenic | 60.0% |
| TCCGGCGCAAGCACAGCAGA+TGG | - | chr4.1:43034735-43034754 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 43032622 | 43034812 | 43032622 | ID=MS.gene07704 |
| chr4.1 | mRNA | 43032622 | 43034812 | 43032622 | ID=MS.gene07704.t1;Parent=MS.gene07704 |
| chr4.1 | exon | 43032622 | 43032702 | 43032622 | ID=MS.gene07704.t1.exon1;Parent=MS.gene07704.t1 |
| chr4.1 | CDS | 43032622 | 43032702 | 43032622 | ID=cds.MS.gene07704.t1;Parent=MS.gene07704.t1 |
| chr4.1 | exon | 43034211 | 43034324 | 43034211 | ID=MS.gene07704.t1.exon2;Parent=MS.gene07704.t1 |
| chr4.1 | CDS | 43034211 | 43034324 | 43034211 | ID=cds.MS.gene07704.t1;Parent=MS.gene07704.t1 |
| chr4.1 | exon | 43034425 | 43034561 | 43034425 | ID=MS.gene07704.t1.exon3;Parent=MS.gene07704.t1 |
| chr4.1 | CDS | 43034425 | 43034561 | 43034425 | ID=cds.MS.gene07704.t1;Parent=MS.gene07704.t1 |
| chr4.1 | exon | 43034656 | 43034812 | 43034656 | ID=MS.gene07704.t1.exon4;Parent=MS.gene07704.t1 |
| chr4.1 | CDS | 43034656 | 43034812 | 43034656 | ID=cds.MS.gene07704.t1;Parent=MS.gene07704.t1 |
| Gene Sequence |
| Protein sequence |
