AlfalfaGEDB | MS.gene89092

M. sativa cultivar XinJiangDaYe / MS.gene89092

KEGG: K14484
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: PF02309.19

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene89092.t1	AES68053.1	79.9	209	25	5	8	212	3	198	3.60E-73	284.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene89092.t1	P93830	43.5	207	87	7	20	198	9	213	2.9e-34	146.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene89092.t1	G7IMD8	79.9	209	25	5	8	212	3	198	2.6e-73	284.6

TFs/TRs:

Gene ID	Type	Classification
MS.gene89092.t1	TR	AUX/IAA

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049150	MS.gene89092	0.802011	6.87E-49	-1.69E-46
MS.gene049153	MS.gene89092	0.800119	1.67E-48	-1.69E-46
MS.gene049443	MS.gene89092	0.812564	3.98E-51	-1.69E-46
MS.gene050398	MS.gene89092	0.846244	2.45E-59	-1.69E-46
MS.gene051983	MS.gene89092	0.802602	5.19E-49	-1.69E-46
MS.gene052255	MS.gene89092	0.804894	1.73E-49	-1.69E-46
MS.gene053494	MS.gene89092	0.806622	7.52E-50	-1.69E-46
MS.gene053928	MS.gene89092	0.801522	8.65E-49	-1.69E-46
MS.gene054349	MS.gene89092	0.810398	1.18E-50	-1.69E-46
MS.gene057396	MS.gene89092	0.815503	8.94E-52	-1.69E-46
MS.gene057750	MS.gene89092	0.80069	1.28E-48	-1.69E-46
MS.gene057754	MS.gene89092	0.818473	1.92E-52	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene89092.t1	MTR_2g102490	82.297	209	20	5	8	212	3	198	2.23e-107	307
MS.gene89092.t1	MTR_1g080860	42.986	221	82	7	21	198	18	237	5.24e-48	157
MS.gene89092.t1	MTR_1g080860	42.986	221	82	7	21	198	18	237	6.78e-48	157
MS.gene89092.t1	MTR_6g488150	39.224	232	91	9	13	198	11	238	7.24e-46	152
MS.gene89092.t1	MTR_1g093240	43.056	216	81	8	20	198	10	220	6.34e-44	147
MS.gene89092.t1	MTR_1g070520	42.793	222	79	11	19	198	14	229	1.26e-43	146
MS.gene89092.t1	MTR_1g093240	43.056	216	81	8	20	198	10	220	1.36e-43	146
MS.gene89092.t1	MTR_7g096090	42.035	226	78	9	21	198	14	234	4.29e-43	145
MS.gene89092.t1	MTR_8g103030	45.122	164	63	4	59	198	117	277	1.29e-40	140
MS.gene89092.t1	MTR_1g076270	43.617	188	71	7	20	198	13	174	3.55e-40	135
MS.gene89092.t1	MTR_1g093350	43.617	188	71	7	20	198	13	174	3.55e-40	135
MS.gene89092.t1	MTR_1g040675	40.314	191	85	6	21	198	4	178	2.69e-39	134
MS.gene89092.t1	MTR_1g070830	40.206	194	91	5	20	198	14	197	1.22e-38	132
MS.gene89092.t1	MTR_5g067350	45.098	153	59	5	68	198	182	331	3.36e-37	132
MS.gene89092.t1	MTR_5g030710	40.625	160	67	4	64	198	163	319	2.44e-36	130
MS.gene89092.t1	MTR_2g101500	40.678	177	67	5	47	198	147	310	8.56e-36	128
MS.gene89092.t1	MTR_1g093240	41.000	200	76	8	20	182	10	204	6.32e-35	123
MS.gene89092.t1	MTR_8g067530	42.069	145	57	4	78	198	199	340	1.13e-33	123
MS.gene89092.t1	MTR_1g040675	38.728	173	77	6	23	182	6	162	3.77e-31	112
MS.gene89092.t1	MTR_4g011880	39.362	188	83	6	20	204	8	167	1.60e-30	110
MS.gene89092.t1	MTR_6g488150	35.714	168	66	7	13	142	11	174	8.95e-24	94.0
MS.gene89092.t1	MTR_2g100780	31.073	177	80	2	64	198	78	254	1.30e-21	90.1
MS.gene89092.t1	MTR_8g014520	34.078	179	79	5	57	198	84	260	1.31e-21	90.1
MS.gene89092.t1	MTR_8g014520	34.078	179	79	5	57	198	84	260	1.55e-21	89.7
MS.gene89092.t1	MTR_2g100780	31.073	177	80	2	64	198	78	254	1.81e-21	89.7
MS.gene89092.t1	MTR_1g069495	41.667	108	54	2	102	200	147	254	2.42e-20	86.7
MS.gene89092.t1	MTR_4g124300	33.083	133	72	4	66	193	58	178	2.63e-19	82.0
MS.gene89092.t1	MTR_5g067350	43.158	95	34	4	64	142	180	270	8.92e-15	71.6
MS.gene89092.t1	MTR_1g085750	30.328	122	69	3	77	193	58	168	5.98e-14	67.4
MS.gene89092.t1	MTR_7g110790	33.663	101	59	2	93	193	61	153	8.74e-14	66.6
MS.gene89092.t1	MTR_4g115075	31.915	141	62	4	73	196	83	206	1.59e-13	67.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene89092.t1	AT1G04250	45.411	207	83	7	20	198	9	213	2.04e-51	166
MS.gene89092.t1	AT4G14550	44.395	223	82	9	20	206	3	219	7.57e-50	162
MS.gene89092.t1	AT4G14550	45.581	215	76	9	20	198	3	212	7.73e-50	162
MS.gene89092.t1	AT3G04730	43.182	220	79	7	21	198	5	220	9.41e-47	154
MS.gene89092.t1	AT3G23050	43.498	223	78	9	20	198	8	226	3.40e-45	150
MS.gene89092.t1	AT4G14550	43.434	198	71	9	20	181	3	195	7.40e-40	135
MS.gene89092.t1	AT1G04240	40.212	189	89	5	20	198	7	181	5.62e-39	133
MS.gene89092.t1	AT3G23030	41.304	184	84	7	15	198	7	166	1.96e-38	131
MS.gene89092.t1	AT4G29080	34.749	259	91	7	14	198	35	289	1.05e-37	133
MS.gene89092.t1	AT3G23030	41.304	184	84	7	15	198	94	253	1.14e-37	132
MS.gene89092.t1	AT5G43700	38.503	187	85	6	20	198	13	177	1.54e-37	129
MS.gene89092.t1	AT1G04240	40.212	189	89	5	20	198	107	281	1.58e-37	132
MS.gene89092.t1	AT3G23050	41.063	207	74	9	20	182	8	210	2.95e-35	124
MS.gene89092.t1	AT3G15540	39.109	202	86	9	20	204	8	189	9.91e-35	122
MS.gene89092.t1	AT1G52830	37.306	193	104	5	20	207	8	188	1.23e-34	122
MS.gene89092.t1	AT5G65670	44.604	139	54	5	78	194	179	316	2.25e-34	125
MS.gene89092.t1	AT5G65670	44.604	139	54	5	78	194	179	316	2.34e-34	125
MS.gene89092.t1	AT1G15580	40.110	182	67	6	20	194	10	156	3.27e-34	120
MS.gene89092.t1	AT2G22670	36.585	205	93	7	28	207	119	311	7.33e-34	123
MS.gene89092.t1	AT2G22670	36.585	205	93	7	28	207	119	311	7.33e-34	123
MS.gene89092.t1	AT2G22670	36.735	196	88	6	28	198	119	303	3.64e-33	121
MS.gene89092.t1	AT2G22670	36.735	196	88	6	28	198	119	303	3.64e-33	121
MS.gene89092.t1	AT2G22670	36.735	196	88	6	28	198	136	320	4.47e-33	121
MS.gene89092.t1	AT4G14560	39.583	192	84	9	10	198	1	163	7.62e-33	116
MS.gene89092.t1	AT3G16500	33.188	229	104	7	15	198	28	252	6.87e-27	103
MS.gene89092.t1	AT3G16500	33.188	229	104	7	15	198	28	252	7.35e-27	103
MS.gene89092.t1	AT1G51950	31.481	216	105	4	21	198	40	250	4.94e-24	96.3
MS.gene89092.t1	AT4G14550	40.268	149	54	5	20	137	3	147	6.80e-23	91.3
MS.gene89092.t1	AT2G33310	37.838	148	81	5	61	200	84	228	2.35e-22	91.7
MS.gene89092.t1	AT2G33310	37.838	148	81	5	61	200	84	228	2.35e-22	91.7
MS.gene89092.t1	AT2G33310	37.838	148	81	5	61	200	85	229	2.40e-22	91.7
MS.gene89092.t1	AT1G80390	45.378	119	43	5	23	135	19	121	1.25e-21	86.7
MS.gene89092.t1	AT3G17600	32.000	150	73	4	58	193	18	152	2.62e-21	86.7
MS.gene89092.t1	AT1G04550	30.412	194	79	7	46	198	41	219	9.31e-21	87.0
MS.gene89092.t1	AT5G25890	32.704	159	73	3	53	197	24	162	2.78e-20	84.3
MS.gene89092.t1	AT4G28640	34.667	150	65	3	82	198	88	237	5.37e-20	85.5
MS.gene89092.t1	AT4G28640	34.667	150	65	3	82	198	88	237	6.77e-20	85.1
MS.gene89092.t1	AT3G23050	36.875	160	53	6	20	137	8	161	2.97e-19	81.6
MS.gene89092.t1	AT4G28640	34.667	150	65	3	82	198	88	237	3.00e-19	84.3
MS.gene89092.t1	AT1G04100	40.952	105	48	3	103	197	154	254	2.04e-17	78.6
MS.gene89092.t1	AT3G62100	40.217	92	46	2	102	193	84	166	9.89e-16	72.4
MS.gene89092.t1	AT2G46990	37.634	93	47	2	102	193	86	168	4.79e-15	70.5
MS.gene89092.t1	AT4G32280	36.559	93	45	1	102	194	119	197	3.63e-14	68.9
MS.gene89092.t1	AT4G32280	36.559	93	45	1	102	194	161	239	1.06e-13	68.2
MS.gene89092.t1	AT3G62100	40.741	81	39	2	102	182	84	155	2.06e-11	60.5
MS.gene89092.t1	AT2G46990	39.024	82	39	2	102	182	86	157	3.84e-11	59.7

Find 44 sgRNAs with CRISPR-Local

Find 74 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCGGAGGACAATATTGATTT+TGG	0.202496	2.4:-2590959	MS.gene89092:CDS
GATGAATGAGAAGAAATTCA+TGG	0.319723	2.4:-2591305	MS.gene89092:CDS
TTGAATCATGTAAGAGGATA+AGG	0.340536	2.4:-2590994	MS.gene89092:CDS
CTTATTATTCGTACATTCAA+TGG	0.347580	2.4:+2591980	None:intergenic
TAATAAGATGAATATTATTC+AGG	0.355657	2.4:-2591964	MS.gene89092:CDS
GGTTCTTACTTTGATGTTGT+TGG	0.366642	2.4:+2591780	None:intergenic
GTTCTTACTTTGATGTTGTT+GGG	0.367350	2.4:+2591781	None:intergenic
CTCACTGGAGGCCGTACATC+TGG	0.369783	2.4:+2590822	None:intergenic
GAGCTTACCCTTGGTCTTCC+CGG	0.380531	2.4:-2591936	MS.gene89092:CDS
TACGTGAAAGTTGCGGTTGA+TGG	0.380805	2.4:-2591588	MS.gene89092:CDS
ATGGTGACTGGATGTTGCTT+GGG	0.460851	2.4:-2591234	MS.gene89092:CDS
ACATGTGGTGGGATGGCCAC+CGG	0.463192	2.4:-2591649	MS.gene89092:CDS
GGTGGGATGGCCACCGGTGA+GGG	0.473868	2.4:-2591643	MS.gene89092:CDS
TGTTTGTTGAATCATGTAAG+AGG	0.487798	2.4:-2591000	MS.gene89092:CDS
TGATGTTGTTGGGAATTTAG+TGG	0.488099	2.4:+2591791	None:intergenic
TGGTGGGATGGCCACCGGTG+AGG	0.504156	2.4:-2591644	MS.gene89092:CDS
ATGAGAAGTACTAGAAGTTG+AGG	0.504166	2.4:+2591842	None:intergenic
GATGGTGACTGGATGTTGCT+TGG	0.516052	2.4:-2591235	MS.gene89092:CDS
CAGGAGACTGAGCTTACCCT+TGG	0.519336	2.4:-2591945	MS.gene89092:CDS
TGTTGCTTGGGGATGCACCC+TGG	0.523036	2.4:-2591222	MS.gene89092:CDS
AGCTCCATATCTAAGAAAAG+TGG	0.534799	2.4:-2591565	MS.gene89092:CDS
TGCATGCAGGGAACATGTGG+TGG	0.534930	2.4:-2591661	MS.gene89092:intron
TATATATGAACTTACTTCCA+GGG	0.535639	2.4:+2591205	None:intergenic
GCAGGGAACATGTGGTGGGA+TGG	0.542566	2.4:-2591656	MS.gene89092:intron
TGTTGCAGGTTCCAGATGTA+CGG	0.542574	2.4:-2590833	MS.gene89092:intron
TTCCTACTTGCCCTCACCGG+TGG	0.558621	2.4:+2591633	None:intergenic
ATAATTATTCTTCTCACTGG+AGG	0.565078	2.4:+2590810	None:intergenic
ACGAAGATAAAGATGGTGAC+TGG	0.565436	2.4:-2591246	MS.gene89092:CDS
GCATGCAGGGAACATGTGGT+GGG	0.566681	2.4:-2591660	MS.gene89092:intron
GGTAGTAGTACCAAAACTGC+AGG	0.586869	2.4:-2591915	MS.gene89092:CDS
GATAAGGCTTATGATTAGCT+CGG	0.592824	2.4:-2590978	MS.gene89092:CDS
GCTACATACGAAGATAAAGA+TGG	0.600922	2.4:-2591253	MS.gene89092:CDS
TGGCAATTAGATGAAGATCA+AGG	0.605901	2.4:+2591865	None:intergenic
GGGTGCATGCAGGGAACATG+TGG	0.617054	2.4:-2591664	MS.gene89092:intron
TACTACTACCGGGAAGACCA+AGG	0.619025	2.4:+2591928	None:intergenic
TTGCAAGTACGTGAAAGTTG+CGG	0.621140	2.4:-2591595	MS.gene89092:CDS
GGCCACCGGTGAGGGCAAGT+AGG	0.630880	2.4:-2591635	MS.gene89092:CDS
GAAGCAATTAGTAGCAAACA+TGG	0.636180	2.4:+2591494	None:intergenic
AGAAGTACTAGAAGTTGAGG+TGG	0.639519	2.4:+2591845	None:intergenic
TCGTACATTCAATGGAACTG+TGG	0.659415	2.4:+2591988	None:intergenic
ACTACTACCGGGAAGACCAA+GGG	0.663756	2.4:+2591929	None:intergenic
TGGTGACTGGATGTTGCTTG+GGG	0.674509	2.4:-2591233	MS.gene89092:CDS
ACAATGTCATCACAAATGAG+TGG	0.687436	2.4:-2592020	None:intergenic
AAGGCTTATGATTAGCTCGG+AGG	0.705152	2.4:-2590975	MS.gene89092:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAATTAATTAATGTAAAGT+TGG	-	chr2.4:2591143-2591162	MS.gene89092:intron	10.0%
!!	AAATTAATTAATGTAAAGTT+GGG	-	chr2.4:2591144-2591163	MS.gene89092:intron	10.0%
!!	TTTATACACAATATAATTAT+AGG	-	chr2.4:2591923-2591942	MS.gene89092:CDS	10.0%
!!	TAATAAGATGAATATTATTC+AGG	-	chr2.4:2590864-2590883	MS.gene89092:intron	15.0%
!!	TATGAAACATAAAAATAACA+TGG	+	chr2.4:2591414-2591433	None:intergenic	15.0%
!!	AAAAAATAGGAATGAATACA+TGG	-	chr2.4:2591553-2591572	MS.gene89092:CDS	20.0%
!!	ATTGATTGATATCATAAGTT+TGG	-	chr2.4:2591946-2591965	MS.gene89092:CDS	20.0%
!!	TTTGATGAATATATACTCTA+AGG	+	chr2.4:2591724-2591743	None:intergenic	20.0%
!	AAATAATAACTAGCTGTAGA+TGG	+	chr2.4:2591657-2591676	None:intergenic	25.0%
!	AACAATATTAGTAAATCAGG+GGG	+	chr2.4:2591979-2591998	None:intergenic	25.0%
!	ACATATATGTTGTGTGTTAT+GGG	-	chr2.4:2591444-2591463	MS.gene89092:intron	25.0%
!	ATATATATGAACTTACTTCC+AGG	+	chr2.4:2591627-2591646	None:intergenic	25.0%
!	CAACAATATTAGTAAATCAG+GGG	+	chr2.4:2591980-2591999	None:intergenic	25.0%
!	CAACTATCATTAATTATTGC+AGG	-	chr2.4:2591491-2591510	MS.gene89092:CDS	25.0%
!	CTGCAATAATTAATGATAGT+TGG	+	chr2.4:2591493-2591512	None:intergenic	25.0%
!	CTTATTATTCGTACATTCAA+TGG	+	chr2.4:2590851-2590870	None:intergenic	25.0%
!	GCAACAATATTAGTAAATCA+GGG	+	chr2.4:2591981-2592000	None:intergenic	25.0%
!	TACATATATGTTGTGTGTTA+TGG	-	chr2.4:2591443-2591462	MS.gene89092:intron	25.0%
!	TATATATGAACTTACTTCCA+GGG	+	chr2.4:2591626-2591645	None:intergenic	25.0%
!	TGATTTACTAATATTGTTGC+AGG	-	chr2.4:2591981-2592000	MS.gene89092:CDS	25.0%
!	TGCAACAATATTAGTAAATC+AGG	+	chr2.4:2591982-2592001	None:intergenic	25.0%
!!	TCATGGATTCTAGAAAAAAT+AGG	-	chr2.4:2591540-2591559	MS.gene89092:CDS	25.0%
!!!	TTTTTTTCTTTCTTTCCTCT+AGG	-	chr2.4:2591804-2591823	MS.gene89092:CDS	25.0%
	ACTAGCTAGCTATATATGTA+CGG	+	chr2.4:2591072-2591091	None:intergenic	30.0%
	GATGAATGAGAAGAAATTCA+TGG	-	chr2.4:2591523-2591542	MS.gene89092:CDS	30.0%
	GTTCTTACTTTGATGTTGTT+GGG	+	chr2.4:2591050-2591069	None:intergenic	30.0%
	TACATATATAGCTAGCTAGT+TGG	-	chr2.4:2591072-2591091	MS.gene89092:intron	30.0%
	TTGAATCATGTAAGAGGATA+AGG	-	chr2.4:2591834-2591853	MS.gene89092:CDS	30.0%
!	TGTTTGTTGAATCATGTAAG+AGG	-	chr2.4:2591828-2591847	MS.gene89092:CDS	30.0%
!!	AGATCCACTTTTCTTAGATA+TGG	+	chr2.4:2591270-2591289	None:intergenic	30.0%
!!!	AGGACAATATTGATTTTGGT+TGG	-	chr2.4:2591873-2591892	MS.gene89092:CDS	30.0%
	AGCTCCATATCTAAGAAAAG+TGG	-	chr2.4:2591263-2591282	MS.gene89092:CDS	35.0%
	AGGGCAAGTAGGAAAAATAT+TGG	-	chr2.4:2591204-2591223	MS.gene89092:intron	35.0%
	GAAGCAATTAGTAGCAAACA+TGG	+	chr2.4:2591337-2591356	None:intergenic	35.0%
	GCTACATACGAAGATAAAGA+TGG	-	chr2.4:2591575-2591594	MS.gene89092:CDS	35.0%
	GGTTCTTACTTTGATGTTGT+TGG	+	chr2.4:2591051-2591070	None:intergenic	35.0%
	TGATGTTGTTGGGAATTTAG+TGG	+	chr2.4:2591040-2591059	None:intergenic	35.0%
	TGATTCAACAAACATCCTAG+AGG	+	chr2.4:2591822-2591841	None:intergenic	35.0%
	TGGCAATTAGATGAAGATCA+AGG	+	chr2.4:2590966-2590985	None:intergenic	35.0%
!	GATAAGGCTTATGATTAGCT+CGG	-	chr2.4:2591850-2591869	MS.gene89092:CDS	35.0%
!!	ATGAGAAGTACTAGAAGTTG+AGG	+	chr2.4:2590989-2591008	None:intergenic	35.0%
!!!	TCGGAGGACAATATTGATTT+TGG	-	chr2.4:2591869-2591888	MS.gene89092:CDS	35.0%
	ACGAAGATAAAGATGGTGAC+TGG	-	chr2.4:2591582-2591601	MS.gene89092:CDS	40.0%
	ATATAGCTAGCTAGTTGGCT+AGG	-	chr2.4:2591077-2591096	MS.gene89092:intron	40.0%
	TCGTACATTCAATGGAACTG+TGG	+	chr2.4:2590843-2590862	None:intergenic	40.0%
	TTGCAAGTACGTGAAAGTTG+CGG	-	chr2.4:2591233-2591252	MS.gene89092:CDS	40.0%
!	ACGTTTTATGCCTGCAGTTT+TGG	+	chr2.4:2590926-2590945	None:intergenic	40.0%
!!	AGAAGTACTAGAAGTTGAGG+TGG	+	chr2.4:2590986-2591005	None:intergenic	40.0%
!!	TGCAGTTTTGGTACTACTAC+CGG	+	chr2.4:2590914-2590933	None:intergenic	40.0%
	ATGTAAAGTTGGGTGCATGC+AGG	-	chr2.4:2591154-2591173	MS.gene89092:intron	45.0%
	GGTAGTAGTACCAAAACTGC+AGG	-	chr2.4:2590913-2590932	MS.gene89092:intron	45.0%
	TACGTGAAAGTTGCGGTTGA+TGG	-	chr2.4:2591240-2591259	MS.gene89092:CDS	45.0%
	TGTAAAGTTGGGTGCATGCA+GGG	-	chr2.4:2591155-2591174	MS.gene89092:intron	45.0%
	TGTTGCAGGTTCCAGATGTA+CGG	-	chr2.4:2591995-2592014	MS.gene89092:CDS	45.0%
!	AAGGCTTATGATTAGCTCGG+AGG	-	chr2.4:2591853-2591872	MS.gene89092:CDS	45.0%
!	ATGGTGACTGGATGTTGCTT+GGG	-	chr2.4:2591594-2591613	MS.gene89092:CDS	45.0%
!	TTTTTCCTACTTGCCCTCAC+CGG	+	chr2.4:2591201-2591220	None:intergenic	45.0%
!!	GCAGTTTTGGTACTACTACC+GGG	+	chr2.4:2590913-2590932	None:intergenic	45.0%
	ACTACTACCGGGAAGACCAA+GGG	+	chr2.4:2590902-2590921	None:intergenic	50.0%
	GATGGTGACTGGATGTTGCT+TGG	-	chr2.4:2591593-2591612	MS.gene89092:CDS	50.0%
	TACTACTACCGGGAAGACCA+AGG	+	chr2.4:2590903-2590922	None:intergenic	50.0%
!	TGGTGACTGGATGTTGCTTG+GGG	-	chr2.4:2591595-2591614	MS.gene89092:CDS	50.0%
	CAGGAGACTGAGCTTACCCT+TGG	-	chr2.4:2590883-2590902	MS.gene89092:intron	55.0%
	GCATGCAGGGAACATGTGGT+GGG	-	chr2.4:2591168-2591187	MS.gene89092:intron	55.0%
	TGCATGCAGGGAACATGTGG+TGG	-	chr2.4:2591167-2591186	MS.gene89092:intron	55.0%
!	GAGCTTACCCTTGGTCTTCC+CGG	-	chr2.4:2590892-2590911	MS.gene89092:intron	55.0%
	GGGTGCATGCAGGGAACATG+TGG	-	chr2.4:2591164-2591183	MS.gene89092:intron	60.0%
	TTCCTACTTGCCCTCACCGG+TGG	+	chr2.4:2591198-2591217	None:intergenic	60.0%
!	ACATGTGGTGGGATGGCCAC+CGG	-	chr2.4:2591179-2591198	MS.gene89092:intron	60.0%
!	GCAGGGAACATGTGGTGGGA+TGG	-	chr2.4:2591172-2591191	MS.gene89092:intron	60.0%
!	TGTTGCTTGGGGATGCACCC+TGG	-	chr2.4:2591606-2591625	MS.gene89092:CDS	60.0%
	GGCCACCGGTGAGGGCAAGT+AGG	-	chr2.4:2591193-2591212	MS.gene89092:intron	70.0%
	GGTGGGATGGCCACCGGTGA+GGG	-	chr2.4:2591185-2591204	MS.gene89092:intron	70.0%
	TGGTGGGATGGCCACCGGTG+AGG	-	chr2.4:2591184-2591203	MS.gene89092:intron	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.4	gene	2590823	2592027	2590823	ID=MS.gene89092
chr2.4	mRNA	2590823	2592027	2590823	ID=MS.gene89092.t1;Parent=MS.gene89092
chr2.4	exon	2591789	2592027	2591789	ID=MS.gene89092.t1.exon1;Parent=MS.gene89092.t1
chr2.4	CDS	2591789	2592027	2591789	ID=cds.MS.gene89092.t1;Parent=MS.gene89092.t1
chr2.4	exon	2591487	2591674	2591487	ID=MS.gene89092.t1.exon2;Parent=MS.gene89092.t1
chr2.4	CDS	2591487	2591674	2591487	ID=cds.MS.gene89092.t1;Parent=MS.gene89092.t1
chr2.4	exon	2591220	2591337	2591220	ID=MS.gene89092.t1.exon3;Parent=MS.gene89092.t1
chr2.4	CDS	2591220	2591337	2591220	ID=cds.MS.gene89092.t1;Parent=MS.gene89092.t1
chr2.4	exon	2590956	2591024	2590956	ID=MS.gene89092.t1.exon4;Parent=MS.gene89092.t1
chr2.4	CDS	2590956	2591024	2590956	ID=cds.MS.gene89092.t1;Parent=MS.gene89092.t1
chr2.4	exon	2590823	2590847	2590823	ID=MS.gene89092.t1.exon5;Parent=MS.gene89092.t1
chr2.4	CDS	2590823	2590847	2590823	ID=cds.MS.gene89092.t1;Parent=MS.gene89092.t1

Gene Sequence

>MS.gene89092

ATGAGTGGTAGCAACTTCCACAGTTCCATTGAATGTACGAATAATAAGATGAATATTATTCAGGAGACTGAGCTTACCCTTGGTCTTCCCGGTAGTAGTACCAAAACTGCAGGCATAAAACGTAGCTTCTCTCACACTCACCTTGATCTTCATCTAATTGCCACCTCAACTTCTAGTACTTCTCATCATCATAATTCACTAAATTCTAATAATACCACTAAATTCCCAACAACATCAAAGTAAGAACCGTACATATATAGCTAGCTAGTTGGCTAGGACGAATTTGATTTTTAATGAATTATTGTTATTTAAGTATGAAAAAAATTAATTAATGTAAAGTTGGGTGCATGCAGGGAACATGTGGTGGGATGGCCACCGGTGAGGGCAAGTAGGAAAAATATTGGTAGTAGTTGCAAGTACGTGAAAGTTGCGGTTGATGGAGCTCCATATCTAAGAAAAGTGGATCTTGAAGTTTATGAAAGTTATGATCATCTCTTCACTGCATTGAATACCATGTTTGCTACTAATTGCTTCAATATACGTACGTATTCATTCATCATGAACGTACAATGATATATTGTGTTGTGTCCATGTTATTTTTATGTTTCATAAATGTATTCTACATATATGTTGTGTGTTATGGGAGTAATTTACTCTTTTTTTTATGCCAACTATCATTAATTATTGCAGGTAATGATTTGATGAATGAGAAGAAATTCATGGATTCTAGAAAAAATAGGAATGAATACATGGCTACATACGAAGATAAAGATGGTGACTGGATGTTGCTTGGGGATGCACCCTGGAAGTAAGTTCATATATATATATATTCCATCTACAGCTAGTTATTATTTTAGTTTTTTTTCTTATAAAACTATATATTTTTTACATTTTGAAACCTTAGAGTATATATTCATCAAATTTCATACAATACTATACAACATGTTTCGATCTATTTATATTCATTTCTTTGTTTTTTTTTTTTTTTCTTTCTTTCCTCTAGGATGTTTGTTGAATCATGTAAGAGGATAAGGCTTATGATTAGCTCGGAGGACAATATTGATTTTGGTTGGTACATTTTTTATTTACTAGCTATTGTTTTTATACACAATATAATTATAGGATTGATTGATATCATAAGTTTGGTTCTTGACCCCCTGATTTACTAATATTGTTGCAGGTTCCAGATGTACGGCCTCCAGTGA

Protein sequence

>MS.gene89092.t1

MSGSNFHSSIECTNNKMNIIQETELTLGLPGSSTKTAGIKRSFSHTHLDLHLIATSTSSTSHHHNSLNSNNTTKFPTTSKEHVVGWPPVRASRKNIGSSCKYVKVAVDGAPYLRKVDLEVYESYDHLFTALNTMFATNCFNIRNDLMNEKKFMDSRKNRNEYMATYEDKDGDWMLLGDAPWKMFVESCKRIRLMISSEDNIDFGWFQMYGLQ