Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91522.t1 | XP_003621186.2 | 97.9 | 238 | 5 | 0 | 30 | 267 | 88 | 325 | 3.00E-125 | 458 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91522.t1 | P81392 | 43.6 | 234 | 105 | 8 | 30 | 251 | 88 | 306 | 2.8e-34 | 147.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91522.t1 | Q2HVT2 | 97.9 | 238 | 5 | 0 | 30 | 267 | 88 | 325 | 2.2e-125 | 458.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene91522.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049378 | MS.gene91522 | 0.803816 | 2.91E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene91522 | 0.809789 | 1.59E-50 | -1.69E-46 |
| MS.gene050139 | MS.gene91522 | 0.802962 | 4.37E-49 | -1.69E-46 |
| MS.gene050168 | MS.gene91522 | 0.808783 | 2.61E-50 | -1.69E-46 |
| MS.gene050226 | MS.gene91522 | 0.809083 | 2.25E-50 | -1.69E-46 |
| MS.gene050227 | MS.gene91522 | 0.805024 | 1.63E-49 | -1.69E-46 |
| MS.gene050228 | MS.gene91522 | 0.801711 | 7.92E-49 | -1.69E-46 |
| MS.gene050330 | MS.gene91522 | -0.805032 | 1.62E-49 | -1.69E-46 |
| MS.gene051789 | MS.gene91522 | 0.819902 | 9.10E-53 | -1.69E-46 |
| MS.gene051983 | MS.gene91522 | 0.804549 | 2.05E-49 | -1.69E-46 |
| MS.gene052178 | MS.gene91522 | 0.808346 | 3.24E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene91522 | 0.802676 | 5.01E-49 | -1.69E-46 |
| MS.gene053928 | MS.gene91522 | 0.800967 | 1.12E-48 | -1.69E-46 |
| MS.gene054011 | MS.gene91522 | 0.803391 | 3.56E-49 | -1.69E-46 |
| MS.gene054012 | MS.gene91522 | 0.801504 | 8.73E-49 | -1.69E-46 |
| MS.gene054596 | MS.gene91522 | 0.804786 | 1.83E-49 | -1.69E-46 |
| MS.gene054942 | MS.gene91522 | 0.803934 | 2.75E-49 | -1.69E-46 |
| MS.gene055604 | MS.gene91522 | 0.821916 | 3.13E-53 | -1.69E-46 |
| MS.gene057754 | MS.gene91522 | 0.80664 | 7.46E-50 | -1.69E-46 |
| MS.gene060476 | MS.gene91522 | 0.817811 | 2.72E-52 | -1.69E-46 |
| MS.gene061049 | MS.gene91522 | 0.823022 | 1.73E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91522.t1 | MTR_7g010210 | 97.899 | 238 | 5 | 0 | 30 | 267 | 88 | 325 | 1.57e-170 | 474 |
| MS.gene91522.t1 | MTR_7g010210 | 70.293 | 239 | 15 | 3 | 30 | 267 | 88 | 271 | 2.21e-109 | 317 |
| MS.gene91522.t1 | MTR_6g012180 | 57.322 | 239 | 73 | 8 | 30 | 256 | 88 | 309 | 8.96e-67 | 210 |
| MS.gene91522.t1 | MTR_3g039990 | 41.667 | 240 | 99 | 9 | 30 | 257 | 89 | 299 | 5.13e-39 | 138 |
| MS.gene91522.t1 | MTR_0140s0030 | 39.526 | 253 | 109 | 11 | 30 | 257 | 89 | 322 | 1.82e-35 | 129 |
| MS.gene91522.t1 | MTR_0489s0020 | 39.526 | 253 | 109 | 11 | 30 | 257 | 89 | 322 | 1.82e-35 | 129 |
| MS.gene91522.t1 | MTR_7g087130 | 28.179 | 291 | 126 | 10 | 7 | 249 | 68 | 323 | 2.90e-15 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91522.t1 | AT3G28910 | 41.909 | 241 | 99 | 8 | 30 | 250 | 12 | 231 | 4.45e-39 | 137 |
| MS.gene91522.t1 | AT3G28910 | 41.909 | 241 | 99 | 8 | 30 | 250 | 88 | 307 | 1.11e-37 | 135 |
| MS.gene91522.t1 | AT5G62470 | 40.856 | 257 | 110 | 6 | 30 | 251 | 87 | 336 | 8.19e-37 | 134 |
| MS.gene91522.t1 | AT5G62470 | 40.856 | 257 | 110 | 6 | 30 | 251 | 88 | 337 | 8.71e-37 | 133 |
| MS.gene91522.t1 | AT3G47600 | 39.300 | 257 | 113 | 9 | 21 | 251 | 77 | 316 | 1.91e-34 | 127 |
| MS.gene91522.t1 | AT3G47600 | 40.079 | 252 | 98 | 9 | 30 | 251 | 82 | 310 | 2.25e-34 | 126 |
| MS.gene91522.t1 | AT1G74650 | 39.526 | 253 | 99 | 10 | 25 | 249 | 1 | 227 | 2.25e-28 | 108 |
| MS.gene91522.t1 | AT1G74650 | 38.057 | 247 | 100 | 9 | 30 | 249 | 12 | 232 | 9.72e-28 | 107 |
| MS.gene91522.t1 | AT1G74650 | 39.676 | 247 | 96 | 9 | 30 | 249 | 88 | 308 | 8.01e-27 | 106 |
| MS.gene91522.t1 | AT1G08810 | 33.761 | 234 | 89 | 8 | 28 | 252 | 3 | 179 | 2.34e-21 | 89.4 |
| MS.gene91522.t1 | AT1G08810 | 33.761 | 234 | 89 | 8 | 28 | 252 | 3 | 179 | 2.34e-21 | 89.4 |
| MS.gene91522.t1 | AT1G08810 | 32.812 | 256 | 99 | 10 | 7 | 251 | 68 | 261 | 6.03e-21 | 90.1 |
| MS.gene91522.t1 | AT5G15310 | 61.538 | 39 | 15 | 0 | 22 | 60 | 1 | 39 | 9.11e-12 | 63.9 |
| MS.gene91522.t1 | AT3G01140 | 34.677 | 124 | 51 | 5 | 30 | 125 | 88 | 209 | 9.60e-11 | 61.6 |
Find 41 sgRNAs with CRISPR-Local
Find 87 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATCATGAATACATTATTT+AGG | 0.228293 | 7.1:-85236522 | MS.gene91522:intron |
| AACATAGCTCGTTTACTAAA+AGG | 0.252975 | 7.1:-85235395 | MS.gene91522:CDS |
| CTTCTTTCCCATTGACCTCT+TGG | 0.294000 | 7.1:+85235578 | None:intergenic |
| AAGAACATGGTCCTGGAAAT+TGG | 0.298566 | 7.1:-85236695 | None:intergenic |
| AGTTGTCCTGAAAAGGTATT+AGG | 0.303742 | 7.1:-85235077 | MS.gene91522:CDS |
| GAAACATTTGAATCTTTGTT+TGG | 0.358400 | 7.1:-85235257 | MS.gene91522:CDS |
| ATGTCATTATCTGTTCTTTG+TGG | 0.377477 | 7.1:+85235713 | None:intergenic |
| GTACTAACCGATGATTTGAT+TGG | 0.381105 | 7.1:+85235359 | None:intergenic |
| GAAAATGAGTTACTATTTGT+AGG | 0.397920 | 7.1:+85235467 | None:intergenic |
| GGAACAGCCCTCCAATTTCC+AGG | 0.403047 | 7.1:+85236684 | None:intergenic |
| TATGAACTATTAACCTGTCT+TGG | 0.426618 | 7.1:+85236659 | None:intergenic |
| AGATTGACCTGGTTCTTTAG+TGG | 0.427373 | 7.1:+85235442 | None:intergenic |
| ATGATCAACAACAGTCCTCT+TGG | 0.437915 | 7.1:+85236538 | None:intergenic |
| CCATTTCTCAAGCAAAGAAA+AGG | 0.449839 | 7.1:+85235115 | None:intergenic |
| TCTTGTAAAACCGTTGCGTC+TGG | 0.450422 | 7.1:+85235173 | None:intergenic |
| AACTATTAACCTGTCTTGGT+TGG | 0.452548 | 7.1:+85236663 | None:intergenic |
| AAGAATTCCAAGAGGTCAAT+GGG | 0.456644 | 7.1:-85235585 | MS.gene91522:CDS |
| AAAGAATTCCAAGAGGTCAA+TGG | 0.463998 | 7.1:-85235586 | MS.gene91522:CDS |
| AAAATGAGTTACTATTTGTA+GGG | 0.472669 | 7.1:+85235468 | None:intergenic |
| AGCAGAATCAAAGTTGTTGA+AGG | 0.476547 | 7.1:+85235313 | None:intergenic |
| TGAAGCAAGTTGTCCTGAAA+AGG | 0.483879 | 7.1:-85235084 | MS.gene91522:CDS |
| CATTATCTGTTCTTTGTGGA+AGG | 0.487830 | 7.1:+85235717 | None:intergenic |
| ATTGATTCTGAACCAACATC+AGG | 0.495731 | 7.1:+85235140 | None:intergenic |
| TATATACAAGAACATGGTCC+TGG | 0.507906 | 7.1:-85236702 | None:intergenic |
| TTTGATTCTGCTTCTAGTAG+TGG | 0.508963 | 7.1:-85235302 | MS.gene91522:CDS |
| AGGGCTGTTCCAACCAAGAC+AGG | 0.512302 | 7.1:-85236672 | MS.gene91522:intron |
| AAGCTCAAGAAATCACAAAC+AGG | 0.513721 | 7.1:-85235659 | MS.gene91522:CDS |
| TAGCTCGTTTACTAAAAGGT+TGG | 0.524179 | 7.1:-85235391 | MS.gene91522:CDS |
| TGCTTCTAGTAGTGGAACAA+AGG | 0.546510 | 7.1:-85235294 | MS.gene91522:CDS |
| ACTTCAAACAGATATTCAAA+TGG | 0.548282 | 7.1:-85235555 | MS.gene91522:CDS |
| CCTGAAAAGGTATTAGGTTG+TGG | 0.555878 | 7.1:-85235071 | MS.gene91522:CDS |
| ATCTTTGTCACCAGACGCAA+CGG | 0.557723 | 7.1:-85235183 | MS.gene91522:CDS |
| CATTTCTCAAGCAAAGAAAA+GGG | 0.562614 | 7.1:+85235116 | None:intergenic |
| GCTTCTAGTAGTGGAACAAA+GGG | 0.568848 | 7.1:-85235293 | MS.gene91522:CDS |
| GATGAAAGTAAGCCTGATGT+TGG | 0.577667 | 7.1:-85235152 | MS.gene91522:CDS |
| AACATGGTCCTGGAAATTGG+AGG | 0.614224 | 7.1:-85236692 | MS.gene91522:CDS |
| GATGACTCCAAAGACTCCAA+AGG | 0.614822 | 7.1:+85235227 | None:intergenic |
| ACATGGTCCTGGAAATTGGA+GGG | 0.621706 | 7.1:-85236691 | MS.gene91522:CDS |
| TAGGAAAATCATGATCCAAG+AGG | 0.661671 | 7.1:-85236553 | MS.gene91522:CDS |
| GAAAAGGTATTAGGTTGTGG+TGG | 0.702340 | 7.1:-85235068 | MS.gene91522:CDS |
| GCATCTCAAAGAATTCCAAG+AGG | 0.704482 | 7.1:-85235593 | MS.gene91522:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAACTACTAAAAAAAT+TGG | + | chr7.1:85235922-85235941 | None:intergenic | 10.0% |
| !! | ATACAAAAAATTATAGAAAT+AGG | + | chr7.1:85235781-85235800 | None:intergenic | 10.0% |
| !! | TACAAAAAATTATAGAAATA+GGG | + | chr7.1:85235780-85235799 | None:intergenic | 10.0% |
| !!! | ATTAATTTATTTGATTTTTG+TGG | - | chr7.1:85235316-85235335 | MS.gene91522:CDS | 10.0% |
| !!! | ATTTTTTTAGTAGTTTTTTT+TGG | - | chr7.1:85235922-85235941 | MS.gene91522:intron | 10.0% |
| !!! | CAAATTATTTATTTGTTTTA+AGG | - | chr7.1:85235530-85235549 | MS.gene91522:CDS | 10.0% |
| !!! | GTTTTATTTTTATTACTTAA+TGG | - | chr7.1:85235235-85235254 | MS.gene91522:CDS | 10.0% |
| !! | ATAATGACATAAAAAACTAT+TGG | - | chr7.1:85236035-85236054 | MS.gene91522:intron | 15.0% |
| !! | TTTAAATATCCCTAAAAAAA+AGG | - | chr7.1:85235822-85235841 | MS.gene91522:intron | 15.0% |
| !!! | AAATTAGAAGATAATTTTTG+TGG | + | chr7.1:85236235-85236254 | None:intergenic | 15.0% |
| !! | AAAATGAGTTACTATTTGTA+GGG | + | chr7.1:85236270-85236289 | None:intergenic | 20.0% |
| !! | ATCTTTATGGAATTAAAAAC+AGG | + | chr7.1:85235700-85235719 | None:intergenic | 20.0% |
| !! | GTATATCATAGATCATTAAT+AGG | - | chr7.1:85235163-85235182 | MS.gene91522:CDS | 20.0% |
| !! | TCATAACTAGTATATCTTTA+TGG | + | chr7.1:85235713-85235732 | None:intergenic | 20.0% |
| !! | TGATCATGAATACATTATTT+AGG | - | chr7.1:85235213-85235232 | MS.gene91522:CDS | 20.0% |
| !! | TTATGAAAGAATATAAGTGT+TGG | - | chr7.1:85235727-85235746 | MS.gene91522:CDS | 20.0% |
| !!! | AGCATTTGATTTCATTTTTT+AGG | - | chr7.1:85235624-85235643 | MS.gene91522:CDS | 20.0% |
| !!! | ATTAAATTTAGGACATAAGT+TGG | - | chr7.1:85235664-85235683 | MS.gene91522:CDS | 20.0% |
| !!! | ATTAGCAAATCCTTTTTTTT+AGG | + | chr7.1:85235835-85235854 | None:intergenic | 20.0% |
| !!! | TTAGCAAATCCTTTTTTTTA+GGG | + | chr7.1:85235834-85235853 | None:intergenic | 20.0% |
| !!! | TTTTGTGGATTAATTTTTCA+GGG | - | chr7.1:85235331-85235350 | MS.gene91522:CDS | 20.0% |
| !!! | TTTTTGTGGATTAATTTTTC+AGG | - | chr7.1:85235330-85235349 | MS.gene91522:CDS | 20.0% |
| ! | AACATTTATGATGTAACAGA+TGG | - | chr7.1:85235978-85235997 | MS.gene91522:intron | 25.0% |
| ! | ACATTTATGATGTAACAGAT+GGG | - | chr7.1:85235979-85235998 | MS.gene91522:intron | 25.0% |
| ! | ACTTCAAACAGATATTCAAA+TGG | - | chr7.1:85236180-85236199 | MS.gene91522:intron | 25.0% |
| ! | AGGGATATTTAAATCCATTT+AGG | + | chr7.1:85235815-85235834 | None:intergenic | 25.0% |
| ! | AGTAGCAAATTATGAAGAAA+AGG | + | chr7.1:85235490-85235509 | None:intergenic | 25.0% |
| ! | GAAAAATCCAATCAAATCAT+CGG | - | chr7.1:85236369-85236388 | MS.gene91522:intron | 25.0% |
| ! | GAAAATGAGTTACTATTTGT+AGG | + | chr7.1:85236271-85236290 | None:intergenic | 25.0% |
| ! | GAAACATTTGAATCTTTGTT+TGG | - | chr7.1:85236478-85236497 | MS.gene91522:intron | 25.0% |
| ! | TAGGGACACAAATTAAAAAT+AGG | + | chr7.1:85235762-85235781 | None:intergenic | 25.0% |
| ! | TATATTAGACTTGTCCTAAA+TGG | - | chr7.1:85235798-85235817 | MS.gene91522:intron | 25.0% |
| !!! | TTCAAGATCTTTTAGGAAAT+AGG | - | chr7.1:85235460-85235479 | MS.gene91522:CDS | 25.0% |
| AACATAGCTCGTTTACTAAA+AGG | - | chr7.1:85236340-85236359 | MS.gene91522:intron | 30.0% | |
| ATGTCATTATCTGTTCTTTG+TGG | + | chr7.1:85236025-85236044 | None:intergenic | 30.0% | |
| CATTTCTCAAGCAAAGAAAA+GGG | + | chr7.1:85236622-85236641 | None:intergenic | 30.0% | |
| TATGAACTATTAACCTGTCT+TGG | + | chr7.1:85235079-85235098 | None:intergenic | 30.0% | |
| TTATGATTCACATGTCTAAC+TGG | - | chr7.1:85235953-85235972 | MS.gene91522:intron | 30.0% | |
| TTCCTAAAAGATCTTGAAGA+TGG | + | chr7.1:85235458-85235477 | None:intergenic | 30.0% | |
| ! | ATCCATCTTCAAGATCTTTT+AGG | - | chr7.1:85235453-85235472 | MS.gene91522:CDS | 30.0% |
| !! | TTAGATGGACTAATTACCTA+AGG | - | chr7.1:85235382-85235401 | MS.gene91522:CDS | 30.0% |
| !!! | TGCTTCATTAAGTGCTTTTT+TGG | + | chr7.1:85236206-85236225 | None:intergenic | 30.0% |
| !!! | TTTGTTTGGTTTTGAACCTT+TGG | - | chr7.1:85236492-85236511 | MS.gene91522:intron | 30.0% |
| AAAGAATTCCAAGAGGTCAA+TGG | - | chr7.1:85236149-85236168 | MS.gene91522:intron | 35.0% | |
| AACTATTAACCTGTCTTGGT+TGG | + | chr7.1:85235075-85235094 | None:intergenic | 35.0% | |
| AAGAATTCCAAGAGGTCAAT+GGG | - | chr7.1:85236150-85236169 | MS.gene91522:intron | 35.0% | |
| AAGCTCAAGAAATCACAAAC+AGG | - | chr7.1:85236076-85236095 | MS.gene91522:intron | 35.0% | |
| AGCAGAATCAAAGTTGTTGA+AGG | + | chr7.1:85236425-85236444 | None:intergenic | 35.0% | |
| CATTATCTGTTCTTTGTGGA+AGG | + | chr7.1:85236021-85236040 | None:intergenic | 35.0% | |
| CCATTTCTCAAGCAAAGAAA+AGG | + | chr7.1:85236623-85236642 | None:intergenic | 35.0% | |
| GTACTAACCGATGATTTGAT+TGG | + | chr7.1:85236379-85236398 | None:intergenic | 35.0% | |
| TAGCTCGTTTACTAAAAGGT+TGG | - | chr7.1:85236344-85236363 | MS.gene91522:intron | 35.0% | |
| TAGGAAAATCATGATCCAAG+AGG | - | chr7.1:85235182-85235201 | MS.gene91522:CDS | 35.0% | |
| TTTGATTCTGCTTCTAGTAG+TGG | - | chr7.1:85236433-85236452 | MS.gene91522:intron | 35.0% | |
| ! | ATTGATTCTGAACCAACATC+AGG | + | chr7.1:85236598-85236617 | None:intergenic | 35.0% |
| ! | CCTTTTCTTTGCTTGAGAAA+TGG | - | chr7.1:85236620-85236639 | MS.gene91522:intron | 35.0% |
| ! | TTTTCTTCCACTAAAGAACC+AGG | - | chr7.1:85236286-85236305 | MS.gene91522:intron | 35.0% |
| !! | AGTTGTCCTGAAAAGGTATT+AGG | - | chr7.1:85236658-85236677 | MS.gene91522:intron | 35.0% |
| !!! | TTTTGAACCTTTGGAGTCTT+TGG | - | chr7.1:85236501-85236520 | MS.gene91522:intron | 35.0% |
| ATGATCAACAACAGTCCTCT+TGG | + | chr7.1:85235200-85235219 | None:intergenic | 40.0% | |
| GATGAAAGTAAGCCTGATGT+TGG | - | chr7.1:85236583-85236602 | MS.gene91522:intron | 40.0% | |
| GCAAAAGTTGCAGACTTAGA+TGG | - | chr7.1:85235367-85235386 | MS.gene91522:CDS | 40.0% | |
| GCATAGCAAAAAGATTGACC+TGG | + | chr7.1:85236307-85236326 | None:intergenic | 40.0% | |
| GCATCTCAAAGAATTCCAAG+AGG | - | chr7.1:85236142-85236161 | MS.gene91522:intron | 40.0% | |
| TGAAGCAAGTTGTCCTGAAA+AGG | - | chr7.1:85236651-85236670 | MS.gene91522:intron | 40.0% | |
| ! | AGATTGACCTGGTTCTTTAG+TGG | + | chr7.1:85236296-85236315 | None:intergenic | 40.0% |
| ! | CCACAACCTAATACCTTTTC+AGG | + | chr7.1:85236667-85236686 | None:intergenic | 40.0% |
| ! | GCTTCTAGTAGTGGAACAAA+GGG | - | chr7.1:85236442-85236461 | MS.gene91522:intron | 40.0% |
| ! | TGCTTCTAGTAGTGGAACAA+AGG | - | chr7.1:85236441-85236460 | MS.gene91522:intron | 40.0% |
| !! | AAGTTACCCCTTTTGATTCC+TGG | + | chr7.1:85235408-85235427 | None:intergenic | 40.0% |
| !! | CCTGAAAAGGTATTAGGTTG+TGG | - | chr7.1:85236664-85236683 | MS.gene91522:intron | 40.0% |
| !! | GAAAAGGTATTAGGTTGTGG+TGG | - | chr7.1:85236667-85236686 | MS.gene91522:intron | 40.0% |
| ACCTAAGGCCAGGAATCAAA+AGG | - | chr7.1:85235397-85235416 | MS.gene91522:CDS | 45.0% | |
| ATCTTTGTCACCAGACGCAA+CGG | - | chr7.1:85236552-85236571 | MS.gene91522:CDS | 45.0% | |
| CCTAAGGCCAGGAATCAAAA+GGG | - | chr7.1:85235398-85235417 | MS.gene91522:CDS | 45.0% | |
| CTAAGGCCAGGAATCAAAAG+GGG | - | chr7.1:85235399-85235418 | MS.gene91522:CDS | 45.0% | |
| CTTCTTTCCCATTGACCTCT+TGG | + | chr7.1:85236160-85236179 | None:intergenic | 45.0% | |
| GATGACTCCAAAGACTCCAA+AGG | + | chr7.1:85236511-85236530 | None:intergenic | 45.0% | |
| GGGTAACTTCACTGAACAAG+AGG | - | chr7.1:85235419-85235438 | MS.gene91522:CDS | 45.0% | |
| TCTTGTAAAACCGTTGCGTC+TGG | + | chr7.1:85236565-85236584 | None:intergenic | 45.0% | |
| TGGACTAATTACCTAAGGCC+AGG | - | chr7.1:85235387-85235406 | MS.gene91522:CDS | 45.0% | |
| !! | TTCATTAAAATTATATTTAT+TGG | - | chr7.1:85235121-85235140 | MS.gene91522:CDS | 5.0% |
| !!! | AAATTTAATTTTACAAAAAT+TGG | + | chr7.1:85235653-85235672 | None:intergenic | 5.0% |
| !!! | ATTTTTGTAAAATTAAATTT+AGG | - | chr7.1:85235653-85235672 | MS.gene91522:CDS | 5.0% |
| !! | CCCTTTTGATTCCTGGCCTT+AGG | + | chr7.1:85235401-85235420 | None:intergenic | 50.0% |
| AGGGCTGTTCCAACCAAGAC+AGG | - | chr7.1:85235063-85235082 | MS.gene91522:CDS | 55.0% | |
| GGAACAGCCCTCCAATTTCC+AGG | + | chr7.1:85235054-85235073 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 85235046 | 85236711 | 85235046 | ID=MS.gene91522 |
| chr7.1 | mRNA | 85235046 | 85236711 | 85235046 | ID=MS.gene91522.t1;Parent=MS.gene91522 |
| chr7.1 | exon | 85236673 | 85236711 | 85236673 | ID=MS.gene91522.t1.exon1;Parent=MS.gene91522.t1 |
| chr7.1 | CDS | 85236673 | 85236711 | 85236673 | ID=cds.MS.gene91522.t1;Parent=MS.gene91522.t1 |
| chr7.1 | exon | 85236523 | 85236572 | 85236523 | ID=MS.gene91522.t1.exon2;Parent=MS.gene91522.t1 |
| chr7.1 | CDS | 85236523 | 85236572 | 85236523 | ID=cds.MS.gene91522.t1;Parent=MS.gene91522.t1 |
| chr7.1 | exon | 85235046 | 85235760 | 85235046 | ID=MS.gene91522.t1.exon3;Parent=MS.gene91522.t1 |
| chr7.1 | CDS | 85235046 | 85235760 | 85235046 | ID=cds.MS.gene91522.t1;Parent=MS.gene91522.t1 |
| Gene Sequence |
| Protein sequence |
