Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92810.t1 | XP_003623714.1 | 92.7 | 329 | 20 | 1 | 1 | 325 | 1 | 329 | 7.30E-174 | 619.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92810.t1 | Q40316 | 67.5 | 326 | 105 | 1 | 1 | 325 | 1 | 326 | 1.0e-128 | 461.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92810.t1 | G7KZB6 | 92.7 | 329 | 20 | 1 | 1 | 325 | 1 | 329 | 5.3e-174 | 619.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056511 | MS.gene92810 | 0.815345 | 9.70E-52 | -1.69E-46 |
| MS.gene057749 | MS.gene92810 | 0.805034 | 1.62E-49 | -1.69E-46 |
| MS.gene05886 | MS.gene92810 | 0.825681 | 4.10E-54 | -1.69E-46 |
| MS.gene059420 | MS.gene92810 | 0.806561 | 7.75E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene028567 | MS.gene92810 | PPI |
| MS.gene92810 | MS.gene40148 | PPI |
| MS.gene071401 | MS.gene92810 | PPI |
| MS.gene92810 | MS.gene071398 | PPI |
| MS.gene92810 | MS.gene006771 | PPI |
| MS.gene92810 | MS.gene56554 | PPI |
| MS.gene92810 | MS.gene96808 | PPI |
| MS.gene92810 | MS.gene40154 | PPI |
| MS.gene92810 | MS.gene031525 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92810.t1 | MTR_7g074820 | 92.705 | 329 | 20 | 1 | 1 | 325 | 1 | 329 | 0.0 | 626 |
| MS.gene92810.t1 | MTR_7g074850 | 87.538 | 329 | 37 | 1 | 1 | 325 | 1 | 329 | 0.0 | 596 |
| MS.gene92810.t1 | MTR_7g074730 | 85.671 | 328 | 44 | 1 | 1 | 325 | 1 | 328 | 0.0 | 581 |
| MS.gene92810.t1 | MTR_7g074880 | 75.153 | 326 | 80 | 1 | 1 | 325 | 1 | 326 | 0.0 | 519 |
| MS.gene92810.t1 | MTR_7g074710 | 67.073 | 328 | 103 | 2 | 1 | 325 | 1 | 326 | 5.43e-166 | 465 |
| MS.gene92810.t1 | MTR_7g074870 | 71.930 | 285 | 79 | 1 | 42 | 325 | 4 | 288 | 3.07e-151 | 426 |
| MS.gene92810.t1 | MTR_4g023730 | 48.328 | 329 | 166 | 3 | 1 | 325 | 1 | 329 | 2.45e-103 | 306 |
| MS.gene92810.t1 | MTR_1g022440 | 47.077 | 325 | 158 | 4 | 8 | 325 | 8 | 325 | 7.81e-102 | 303 |
| MS.gene92810.t1 | MTR_1g022445 | 47.692 | 325 | 156 | 4 | 8 | 325 | 8 | 325 | 2.23e-97 | 291 |
| MS.gene92810.t1 | MTR_4g092080 | 41.818 | 330 | 177 | 6 | 5 | 323 | 11 | 336 | 5.11e-79 | 244 |
| MS.gene92810.t1 | MTR_4g081440 | 37.059 | 340 | 187 | 9 | 6 | 325 | 22 | 354 | 4.22e-68 | 217 |
| MS.gene92810.t1 | MTR_4g081440 | 37.059 | 340 | 186 | 10 | 6 | 325 | 18 | 349 | 1.01e-66 | 213 |
| MS.gene92810.t1 | MTR_2g101330 | 38.462 | 325 | 185 | 10 | 7 | 325 | 4 | 319 | 1.23e-63 | 204 |
| MS.gene92810.t1 | MTR_8g062110 | 37.920 | 327 | 190 | 9 | 1 | 322 | 1 | 319 | 7.18e-61 | 197 |
| MS.gene92810.t1 | MTR_8g062110 | 37.615 | 327 | 191 | 8 | 1 | 322 | 10 | 328 | 8.45e-61 | 197 |
| MS.gene92810.t1 | MTR_3g005210 | 36.223 | 323 | 193 | 7 | 8 | 325 | 6 | 320 | 2.66e-60 | 196 |
| MS.gene92810.t1 | MTR_2g013230 | 35.652 | 345 | 197 | 9 | 1 | 325 | 1 | 340 | 2.47e-59 | 194 |
| MS.gene92810.t1 | MTR_8g062110 | 39.643 | 280 | 158 | 6 | 1 | 275 | 1 | 274 | 4.28e-59 | 191 |
| MS.gene92810.t1 | MTR_8g062110 | 39.236 | 288 | 163 | 7 | 1 | 283 | 1 | 281 | 4.75e-59 | 191 |
| MS.gene92810.t1 | MTR_5g056600 | 36.646 | 322 | 192 | 8 | 9 | 325 | 5 | 319 | 1.28e-58 | 191 |
| MS.gene92810.t1 | MTR_8g062440 | 37.195 | 328 | 192 | 8 | 4 | 325 | 3 | 322 | 3.03e-57 | 188 |
| MS.gene92810.t1 | MTR_8g062440 | 37.195 | 328 | 191 | 9 | 4 | 325 | 3 | 321 | 1.73e-56 | 186 |
| MS.gene92810.t1 | MTR_4g077130 | 37.589 | 282 | 164 | 8 | 1 | 276 | 1 | 276 | 3.29e-56 | 185 |
| MS.gene92810.t1 | MTR_3g005170 | 35.093 | 322 | 196 | 8 | 8 | 324 | 10 | 323 | 5.78e-56 | 184 |
| MS.gene92810.t1 | MTR_3g005170 | 37.363 | 273 | 162 | 6 | 8 | 276 | 10 | 277 | 3.64e-55 | 181 |
| MS.gene92810.t1 | MTR_8g062440 | 40.364 | 275 | 153 | 7 | 4 | 273 | 3 | 271 | 1.95e-54 | 181 |
| MS.gene92810.t1 | MTR_2g013250 | 34.593 | 344 | 194 | 8 | 3 | 323 | 2 | 337 | 3.30e-53 | 178 |
| MS.gene92810.t1 | MTR_2g013260 | 35.569 | 343 | 196 | 10 | 1 | 323 | 1 | 338 | 8.34e-52 | 174 |
| MS.gene92810.t1 | MTR_3g031650 | 34.347 | 329 | 191 | 11 | 8 | 325 | 5 | 319 | 1.01e-50 | 171 |
| MS.gene92810.t1 | MTR_4g077100 | 35.587 | 281 | 171 | 5 | 1 | 276 | 3 | 278 | 1.13e-50 | 169 |
| MS.gene92810.t1 | MTR_4g077100 | 35.943 | 281 | 170 | 6 | 1 | 276 | 3 | 278 | 5.02e-50 | 169 |
| MS.gene92810.t1 | MTR_5g072620 | 36.364 | 330 | 183 | 11 | 8 | 325 | 5 | 319 | 1.94e-48 | 165 |
| MS.gene92810.t1 | MTR_7g117190 | 33.140 | 344 | 204 | 9 | 3 | 325 | 2 | 340 | 3.95e-48 | 165 |
| MS.gene92810.t1 | MTR_4g009040 | 34.056 | 323 | 198 | 9 | 7 | 325 | 12 | 323 | 6.82e-48 | 164 |
| MS.gene92810.t1 | MTR_2g104960 | 36.223 | 323 | 188 | 13 | 8 | 325 | 20 | 329 | 5.88e-47 | 162 |
| MS.gene92810.t1 | MTR_4g009040 | 33.333 | 327 | 199 | 9 | 7 | 325 | 12 | 327 | 2.32e-46 | 160 |
| MS.gene92810.t1 | MTR_3g031650 | 35.036 | 274 | 165 | 7 | 8 | 275 | 5 | 271 | 8.14e-46 | 157 |
| MS.gene92810.t1 | MTR_4g006940 | 33.945 | 327 | 198 | 12 | 4 | 325 | 13 | 326 | 1.34e-45 | 158 |
| MS.gene92810.t1 | MTR_2g013260 | 35.374 | 294 | 170 | 7 | 1 | 275 | 1 | 293 | 2.03e-43 | 151 |
| MS.gene92810.t1 | MTR_4g006940 | 35.379 | 277 | 166 | 8 | 4 | 277 | 13 | 279 | 2.35e-43 | 150 |
| MS.gene92810.t1 | MTR_4g006940 | 35.379 | 277 | 166 | 8 | 4 | 277 | 13 | 279 | 2.35e-43 | 150 |
| MS.gene92810.t1 | MTR_4g009690 | 32.919 | 322 | 203 | 8 | 7 | 325 | 12 | 323 | 3.52e-42 | 149 |
| MS.gene92810.t1 | MTR_4g009690 | 32.923 | 325 | 198 | 9 | 7 | 325 | 12 | 322 | 4.83e-42 | 148 |
| MS.gene92810.t1 | MTR_2g028620 | 33.134 | 335 | 189 | 13 | 8 | 325 | 10 | 326 | 1.85e-41 | 147 |
| MS.gene92810.t1 | MTR_7g117190 | 33.788 | 293 | 173 | 7 | 3 | 275 | 2 | 293 | 3.57e-41 | 145 |
| MS.gene92810.t1 | MTR_3g005170 | 30.841 | 321 | 180 | 7 | 8 | 324 | 10 | 292 | 4.59e-40 | 142 |
| MS.gene92810.t1 | MTR_2g028620 | 35.294 | 272 | 159 | 9 | 8 | 270 | 10 | 273 | 2.11e-38 | 139 |
| MS.gene92810.t1 | MTR_2g013230 | 32.780 | 241 | 138 | 8 | 105 | 325 | 14 | 250 | 6.46e-29 | 112 |
| MS.gene92810.t1 | MTR_8g062110 | 33.480 | 227 | 140 | 7 | 100 | 322 | 14 | 233 | 7.73e-27 | 106 |
| MS.gene92810.t1 | MTR_0164s0070 | 39.844 | 128 | 75 | 2 | 7 | 133 | 4 | 130 | 5.38e-26 | 103 |
| MS.gene92810.t1 | MTR_8g062110 | 35.000 | 180 | 108 | 4 | 100 | 275 | 14 | 188 | 5.95e-25 | 99.8 |
| MS.gene92810.t1 | MTR_5g029990 | 28.571 | 273 | 165 | 11 | 8 | 271 | 12 | 263 | 8.82e-24 | 99.4 |
| MS.gene92810.t1 | MTR_7g117190 | 31.466 | 232 | 134 | 8 | 115 | 325 | 3 | 230 | 1.49e-22 | 94.4 |
| MS.gene92810.t1 | MTR_6g406250 | 29.008 | 262 | 161 | 10 | 4 | 252 | 51 | 300 | 2.02e-22 | 96.7 |
| MS.gene92810.t1 | MTR_2g013260 | 31.765 | 255 | 146 | 10 | 89 | 323 | 21 | 267 | 1.16e-21 | 93.2 |
| MS.gene92810.t1 | MTR_6g406250 | 29.384 | 211 | 130 | 6 | 4 | 204 | 51 | 252 | 1.11e-20 | 90.1 |
| MS.gene92810.t1 | MTR_7g074865 | 83.721 | 43 | 7 | 0 | 1 | 43 | 1 | 43 | 1.58e-20 | 84.3 |
| MS.gene92810.t1 | MTR_3g101500 | 26.471 | 272 | 162 | 9 | 7 | 267 | 3 | 247 | 8.84e-16 | 77.4 |
| MS.gene92810.t1 | MTR_3g101500 | 26.471 | 272 | 162 | 9 | 7 | 267 | 3 | 247 | 1.03e-15 | 76.6 |
| MS.gene92810.t1 | MTR_3g101500 | 30.366 | 191 | 113 | 6 | 7 | 197 | 3 | 173 | 2.31e-14 | 71.6 |
| MS.gene92810.t1 | MTR_0685s0030 | 35.652 | 115 | 70 | 3 | 164 | 276 | 3 | 115 | 7.80e-14 | 67.4 |
| MS.gene92810.t1 | MTR_0685s0030 | 35.652 | 115 | 70 | 3 | 164 | 276 | 3 | 115 | 2.36e-13 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92810.t1 | AT2G45400 | 50.610 | 328 | 153 | 5 | 6 | 325 | 38 | 364 | 2.05e-102 | 305 |
| MS.gene92810.t1 | AT5G42800 | 49.695 | 328 | 159 | 4 | 1 | 325 | 1 | 325 | 5.43e-102 | 305 |
| MS.gene92810.t1 | AT2G45400 | 51.786 | 280 | 127 | 4 | 6 | 277 | 38 | 317 | 1.22e-91 | 276 |
| MS.gene92810.t1 | AT2G45400 | 49.315 | 292 | 140 | 4 | 41 | 325 | 17 | 307 | 2.06e-84 | 257 |
| MS.gene92810.t1 | AT4G35420 | 40.729 | 329 | 183 | 7 | 1 | 325 | 1 | 321 | 3.13e-79 | 244 |
| MS.gene92810.t1 | AT1G61720 | 39.339 | 333 | 187 | 6 | 4 | 325 | 9 | 337 | 1.50e-75 | 236 |
| MS.gene92810.t1 | AT2G45400 | 54.167 | 216 | 93 | 3 | 6 | 215 | 38 | 253 | 2.57e-71 | 222 |
| MS.gene92810.t1 | AT1G68540 | 38.199 | 322 | 187 | 8 | 10 | 325 | 6 | 321 | 8.77e-59 | 192 |
| MS.gene92810.t1 | AT1G09480 | 37.994 | 329 | 193 | 8 | 1 | 325 | 1 | 322 | 2.97e-58 | 191 |
| MS.gene92810.t1 | AT1G51410 | 34.557 | 327 | 203 | 8 | 3 | 325 | 4 | 323 | 7.60e-58 | 189 |
| MS.gene92810.t1 | AT1G09480 | 37.994 | 329 | 193 | 8 | 1 | 325 | 48 | 369 | 1.05e-57 | 191 |
| MS.gene92810.t1 | AT2G02400 | 36.310 | 336 | 181 | 12 | 4 | 325 | 2 | 318 | 1.21e-57 | 189 |
| MS.gene92810.t1 | AT1G25460 | 37.538 | 325 | 183 | 8 | 10 | 325 | 6 | 319 | 5.28e-57 | 187 |
| MS.gene92810.t1 | AT5G19440 | 36.474 | 329 | 195 | 9 | 2 | 324 | 3 | 323 | 8.80e-57 | 187 |
| MS.gene92810.t1 | AT1G09490 | 38.732 | 284 | 165 | 6 | 1 | 280 | 1 | 279 | 3.94e-56 | 185 |
| MS.gene92810.t1 | AT1G09510 | 37.690 | 329 | 188 | 9 | 1 | 322 | 1 | 319 | 1.15e-55 | 184 |
| MS.gene92810.t1 | AT4G27250 | 32.198 | 323 | 197 | 5 | 9 | 317 | 14 | 328 | 5.11e-55 | 183 |
| MS.gene92810.t1 | AT4G27250 | 31.915 | 329 | 200 | 5 | 9 | 317 | 14 | 338 | 6.01e-55 | 183 |
| MS.gene92810.t1 | AT5G58490 | 37.273 | 330 | 180 | 12 | 8 | 325 | 9 | 323 | 9.05e-54 | 179 |
| MS.gene92810.t1 | AT1G66800 | 38.828 | 273 | 157 | 7 | 4 | 273 | 3 | 268 | 2.80e-53 | 177 |
| MS.gene92810.t1 | AT1G09500 | 36.462 | 277 | 168 | 4 | 1 | 273 | 1 | 273 | 1.91e-50 | 169 |
| MS.gene92810.t1 | AT1G09500 | 36.268 | 284 | 173 | 5 | 1 | 280 | 1 | 280 | 5.05e-50 | 169 |
| MS.gene92810.t1 | AT1G15950 | 37.152 | 323 | 185 | 13 | 8 | 325 | 13 | 322 | 4.66e-49 | 167 |
| MS.gene92810.t1 | AT1G15950 | 37.152 | 323 | 185 | 13 | 8 | 325 | 13 | 322 | 4.66e-49 | 167 |
| MS.gene92810.t1 | AT1G76470 | 35.238 | 315 | 196 | 6 | 5 | 316 | 4 | 313 | 1.19e-46 | 160 |
| MS.gene92810.t1 | AT1G15950 | 36.570 | 309 | 183 | 9 | 8 | 313 | 13 | 311 | 2.08e-46 | 160 |
| MS.gene92810.t1 | AT2G33590 | 35.312 | 320 | 187 | 10 | 5 | 317 | 6 | 312 | 3.42e-46 | 159 |
| MS.gene92810.t1 | AT1G15950 | 39.194 | 273 | 153 | 9 | 8 | 277 | 13 | 275 | 1.16e-45 | 156 |
| MS.gene92810.t1 | AT1G15950 | 39.051 | 274 | 154 | 9 | 8 | 278 | 13 | 276 | 1.79e-45 | 156 |
| MS.gene92810.t1 | AT1G15950 | 39.051 | 274 | 154 | 9 | 8 | 278 | 13 | 276 | 2.52e-45 | 156 |
| MS.gene92810.t1 | AT2G33600 | 37.812 | 320 | 179 | 12 | 5 | 317 | 6 | 312 | 8.25e-45 | 155 |
| MS.gene92810.t1 | AT1G80820 | 34.985 | 323 | 192 | 12 | 8 | 325 | 8 | 317 | 1.86e-44 | 155 |
| MS.gene92810.t1 | AT1G80820 | 36.264 | 273 | 161 | 8 | 8 | 277 | 8 | 270 | 2.44e-41 | 145 |
| MS.gene92810.t1 | AT1G09490 | 35.600 | 250 | 153 | 5 | 35 | 280 | 3 | 248 | 1.20e-40 | 144 |
| MS.gene92810.t1 | AT1G09500 | 33.333 | 246 | 157 | 4 | 39 | 280 | 4 | 246 | 2.47e-34 | 127 |
| MS.gene92810.t1 | AT1G68540 | 34.247 | 219 | 134 | 6 | 112 | 325 | 1 | 214 | 3.12e-29 | 112 |
| MS.gene92810.t1 | AT2G23910 | 27.303 | 304 | 199 | 10 | 9 | 302 | 11 | 302 | 4.79e-29 | 113 |
| MS.gene92810.t1 | AT2G23910 | 27.174 | 276 | 183 | 8 | 9 | 278 | 11 | 274 | 1.69e-27 | 108 |
| MS.gene92810.t1 | AT2G23910 | 27.007 | 274 | 182 | 8 | 9 | 276 | 11 | 272 | 3.63e-27 | 107 |
| MS.gene92810.t1 | AT4G30470 | 26.165 | 279 | 185 | 8 | 9 | 280 | 11 | 275 | 6.83e-26 | 105 |
| MS.gene92810.t1 | AT1G15950 | 32.035 | 231 | 145 | 9 | 100 | 325 | 1 | 224 | 1.24e-21 | 92.4 |
| MS.gene92810.t1 | AT5G14700 | 28.782 | 271 | 155 | 9 | 4 | 252 | 51 | 305 | 9.46e-21 | 92.0 |
| MS.gene92810.t1 | AT5G14700 | 30.476 | 210 | 119 | 6 | 4 | 197 | 51 | 249 | 2.63e-19 | 86.7 |
| MS.gene92810.t1 | AT4G33360 | 28.369 | 282 | 166 | 10 | 7 | 276 | 2 | 259 | 6.06e-19 | 86.3 |
| MS.gene92810.t1 | AT4G33360 | 28.369 | 282 | 166 | 10 | 7 | 276 | 14 | 271 | 7.74e-19 | 85.9 |
| MS.gene92810.t1 | AT2G23910 | 25.660 | 265 | 174 | 10 | 49 | 302 | 16 | 268 | 9.73e-19 | 84.7 |
| MS.gene92810.t1 | AT4G33360 | 28.369 | 282 | 166 | 10 | 7 | 276 | 14 | 271 | 1.04e-18 | 85.9 |
Find 67 sgRNAs with CRISPR-Local
Find 156 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGCTGCATTGAAACTTTC+TGG | 0.117961 | 7.4:+30436513 | None:intergenic |
| GAGAAAGCTGTTCTTGAATT+TGG | 0.151014 | 7.4:-30436204 | MS.gene92810:CDS |
| AGTTCACCAGCTTTCTTATT+TGG | 0.171661 | 7.4:-30436093 | MS.gene92810:intron |
| TTCATCTTCTAGAGAGCTTA+TGG | 0.209568 | 7.4:-30435673 | MS.gene92810:intron |
| CATTGAAAATATTTAGCTTT+TGG | 0.212269 | 7.4:+30436550 | None:intergenic |
| GAGCAATTATATCTCCCTTT+TGG | 0.266827 | 7.4:+30435851 | None:intergenic |
| AGAGAGCTTATGGGAGTTAA+AGG | 0.273617 | 7.4:-30435663 | MS.gene92810:CDS |
| ACTGGAGGTACAGGGTTTAT+TGG | 0.300052 | 7.4:-30438135 | MS.gene92810:CDS |
| AGAACCATTGATGGAGCATT+AGG | 0.319772 | 7.4:-30436411 | MS.gene92810:CDS |
| GATGTTGGCATTTGAAGTTC+AGG | 0.351951 | 7.4:+30435776 | None:intergenic |
| AGGTAATGGATGAAAGTTAT+TGG | 0.353449 | 7.4:-30436296 | MS.gene92810:CDS |
| CATTTGAAGTTCAGGATACT+TGG | 0.362756 | 7.4:+30435784 | None:intergenic |
| ATAAGAAAGCTGGTGAACTA+TGG | 0.364710 | 7.4:+30436097 | None:intergenic |
| AATTGAATGTTGCAAGGAAA+AGG | 0.371801 | 7.4:-30435553 | MS.gene92810:CDS |
| ATTTGGAGAACAACATGGTT+TGG | 0.377334 | 7.4:-30436187 | MS.gene92810:CDS |
| GTACAGGGTTTATTGGTTCA+TGG | 0.397157 | 7.4:-30438128 | MS.gene92810:CDS |
| GAGGTTAAATGTGGAAACTT+AGG | 0.398400 | 7.4:+30435639 | None:intergenic |
| TCTTTCAGTTCGAAATCAAC+TGG | 0.399688 | 7.4:+30436456 | None:intergenic |
| TTGCTGCATTGAAACTTTCT+GGG | 0.400104 | 7.4:+30436514 | None:intergenic |
| ACGAGATACAAAAGCACTAA+TGG | 0.408728 | 7.4:+30435937 | None:intergenic |
| TCATCTTCTAGAGAGCTTAT+GGG | 0.409352 | 7.4:-30435672 | MS.gene92810:intron |
| TCTTCAATAGTTGCAATGAA+TGG | 0.434791 | 7.4:+30435827 | None:intergenic |
| AAAGGAAGAGTTTGTGTGAC+TGG | 0.438296 | 7.4:-30438153 | MS.gene92810:CDS |
| CTTGAACATCCTAATCCAAA+AGG | 0.439060 | 7.4:-30435866 | MS.gene92810:CDS |
| GTTTGTGTGACTGGAGGTAC+AGG | 0.443705 | 7.4:-30438144 | MS.gene92810:CDS |
| ATCATCCACGAGTTTCTTTG+AGG | 0.447908 | 7.4:+30435620 | None:intergenic |
| ATGTTCAAGTATAGCCTTGA+GGG | 0.449290 | 7.4:-30435591 | MS.gene92810:CDS |
| AATTCCTAATGCTCCATCAA+TGG | 0.462695 | 7.4:+30436407 | None:intergenic |
| AGTTTCAATGCAGCAATTGA+AGG | 0.465129 | 7.4:-30436507 | MS.gene92810:CDS |
| TTCATTTGTCCTAAGCTACC+TGG | 0.469552 | 7.4:-30436126 | MS.gene92810:CDS |
| TAACAGCATAACCATCTTCA+AGG | 0.473218 | 7.4:+30438091 | None:intergenic |
| AAACAAAGAAGAAGAGGTAA+TGG | 0.474396 | 7.4:-30436310 | MS.gene92810:CDS |
| ATCAAGAGACTCCTTGAAGA+TGG | 0.485072 | 7.4:-30438102 | MS.gene92810:CDS |
| TCAAAGAAACTCGTGGATGA+TGG | 0.487540 | 7.4:-30435618 | MS.gene92810:CDS |
| ATTGAATGTTGCAAGGAAAA+GGG | 0.495429 | 7.4:-30435552 | MS.gene92810:CDS |
| GCAGCAATTGAAGGGTGCAT+TGG | 0.498418 | 7.4:-30436498 | MS.gene92810:CDS |
| TAGCCTTGAGGGAATGTTTG+AGG | 0.506068 | 7.4:-30435580 | MS.gene92810:CDS |
| TGGACAGATCCAGGTAGCTT+AGG | 0.512154 | 7.4:+30436117 | None:intergenic |
| ACAGCATATGACCAAGCAAA+AGG | 0.516501 | 7.4:+30436243 | None:intergenic |
| TGTAGAACTCACTTGGATGT+TGG | 0.517066 | 7.4:+30435761 | None:intergenic |
| AAAGGTCCAACAACAAAAGT+TGG | 0.534220 | 7.4:+30436147 | None:intergenic |
| GGTGAACTATGGACAGATCC+AGG | 0.537967 | 7.4:+30436108 | None:intergenic |
| CTTGAATTTGGAGAACAACA+TGG | 0.539504 | 7.4:-30436192 | MS.gene92810:CDS |
| CACTTACCAAATAAGAAAGC+TGG | 0.547090 | 7.4:+30436087 | None:intergenic |
| TATGCAAAACAAAGAAGAAG+AGG | 0.554133 | 7.4:-30436316 | MS.gene92810:CDS |
| GTAAACTGGTAATGCAAGAA+GGG | 0.559556 | 7.4:-30438176 | None:intergenic |
| ATCATCAACATGCACCATAC+CGG | 0.559899 | 7.4:+30435913 | None:intergenic |
| AGTTTCTTTGAGGTTAAATG+TGG | 0.564214 | 7.4:+30435630 | None:intergenic |
| TTGAACATCCTAATCCAAAA+GGG | 0.565903 | 7.4:-30435865 | MS.gene92810:CDS |
| GGTAAACTGGTAATGCAAGA+AGG | 0.572909 | 7.4:-30438177 | None:intergenic |
| CTGGTAATGCAAGAAGGGAA+AGG | 0.573276 | 7.4:-30438171 | None:intergenic |
| GTTTCAATGCAGCAATTGAA+GGG | 0.573950 | 7.4:-30436506 | MS.gene92810:CDS |
| ACCACTGTTAGATCTAATCC+AGG | 0.585583 | 7.4:-30438066 | MS.gene92810:intron |
| CAGGATACTTGGAAGAAACA+AGG | 0.598723 | 7.4:+30435795 | None:intergenic |
| GGACGCAATTGAATGTTGCA+AGG | 0.609289 | 7.4:-30435559 | MS.gene92810:CDS |
| CGTCCTCAAACATTCCCTCA+AGG | 0.610573 | 7.4:+30435577 | None:intergenic |
| ACACACAGCAGAAGCACTTG+AGG | 0.617963 | 7.4:+30436338 | None:intergenic |
| TTTAACCTCAAAGAAACTCG+TGG | 0.633314 | 7.4:-30435625 | MS.gene92810:CDS |
| TTTGTGTGACTGGAGGTACA+GGG | 0.633409 | 7.4:-30438143 | MS.gene92810:CDS |
| TATGGTGCATGTTGATGATG+TGG | 0.643007 | 7.4:-30435909 | MS.gene92810:CDS |
| TTTCGAACTGAAAGAACCAG+AGG | 0.652756 | 7.4:-30436448 | MS.gene92810:CDS |
| CATGTTCAAGTATAGCCTTG+AGG | 0.659714 | 7.4:-30435592 | MS.gene92810:CDS |
| GGTAGCTTAGGACAAATGAA+AGG | 0.676303 | 7.4:+30436129 | None:intergenic |
| AATCAACTGGAGTAGCTGTG+TGG | 0.682421 | 7.4:+30436469 | None:intergenic |
| GGAAGAGTTTGTGTGACTGG+AGG | 0.702220 | 7.4:-30438150 | MS.gene92810:CDS |
| ACCTGGATTAGATCTAACAG+TGG | 0.730654 | 7.4:+30438065 | None:intergenic |
| TTGCATTTGGAAGATCTGTG+AGG | 0.788148 | 7.4:+30436574 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAATTTAAATTTTTTTTT+TGG | + | chr7.4:30435718-30435737 | None:intergenic | 0.0% |
| !! | AATTGATAAAAATTAACAAA+TGG | - | chr7.4:30437717-30437736 | MS.gene92810:intron | 10.0% |
| !! | TAACAACAAATAAAAAAAAT+TGG | + | chr7.4:30437032-30437051 | None:intergenic | 10.0% |
| !! | AGTGTAAAAATCTAATATAA+TGG | - | chr7.4:30436016-30436035 | MS.gene92810:intron | 15.0% |
| !!! | AGATTTTATATGTTGAAATT+TGG | + | chr7.4:30436901-30436920 | None:intergenic | 15.0% |
| !!! | ATCTAAAACAAAATTTTAGA+AGG | + | chr7.4:30435986-30436005 | None:intergenic | 15.0% |
| !!! | ATTGAAAATATTTAGCTTTT+GGG | + | chr7.4:30437159-30437178 | None:intergenic | 15.0% |
| !!! | TTCAATTCTTCATTTTTTTA+GGG | + | chr7.4:30436660-30436679 | None:intergenic | 15.0% |
| !! | AACAACAACATTTGAATTAA+GGG | + | chr7.4:30435671-30435690 | None:intergenic | 20.0% |
| !! | TAAATATTGTTTATCCAGTT+CGG | - | chr7.4:30436359-30436378 | MS.gene92810:CDS | 20.0% |
| !!! | AAGTAGTTCAAATGTTTTTT+AGG | + | chr7.4:30435890-30435909 | None:intergenic | 20.0% |
| !!! | AGTAGTTCAAATGTTTTTTA+GGG | + | chr7.4:30435889-30435908 | None:intergenic | 20.0% |
| !!! | CATTGAAAATATTTAGCTTT+TGG | + | chr7.4:30437160-30437179 | None:intergenic | 20.0% |
| !!! | CTTCAATTCTTCATTTTTTT+AGG | + | chr7.4:30436661-30436680 | None:intergenic | 20.0% |
| !!! | TGATTTGAATTTTAGTTAAG+AGG | + | chr7.4:30437005-30437024 | None:intergenic | 20.0% |
| ! | ACAAAACAACCTAAGAATAT+AGG | + | chr7.4:30436979-30436998 | None:intergenic | 25.0% |
| ! | ACAACAACATTTGAATTAAG+GGG | + | chr7.4:30435670-30435689 | None:intergenic | 25.0% |
| ! | AGAAATATTTGTAAACACCT+TGG | + | chr7.4:30436561-30436580 | None:intergenic | 25.0% |
| ! | AGATAAAGTTAGTACTGTAT+TGG | + | chr7.4:30436762-30436781 | None:intergenic | 25.0% |
| ! | ATCCAAAAAATTTGAAGACA+GGG | + | chr7.4:30436927-30436946 | None:intergenic | 25.0% |
| ! | CAAAACAACCTAAGAATATA+GGG | + | chr7.4:30436978-30436997 | None:intergenic | 25.0% |
| ! | CAACAACAACATTTGAATTA+AGG | + | chr7.4:30435672-30435691 | None:intergenic | 25.0% |
| ! | GAAATATTTGTAAACACCTT+GGG | + | chr7.4:30436560-30436579 | None:intergenic | 25.0% |
| ! | TATTCTACTTCGATTAGAAA+AGG | - | chr7.4:30435826-30435845 | MS.gene92810:CDS | 25.0% |
| !! | TTCATTTAGTGTTTTCTCTA+AGG | + | chr7.4:30436505-30436524 | None:intergenic | 25.0% |
| !!! | ATTAATTTGTAGAACTCACT+TGG | + | chr7.4:30437956-30437975 | None:intergenic | 25.0% |
| !!! | TTGAAGTTCTAGAAAAATTG+TGG | + | chr7.4:30436864-30436883 | None:intergenic | 25.0% |
| !!! | TTTGTTGTTATTGTTGCTTA+AGG | + | chr7.4:30436259-30436278 | None:intergenic | 25.0% |
| AAACAAAGAAGAAGAGGTAA+TGG | - | chr7.4:30437397-30437416 | MS.gene92810:intron | 30.0% | |
| AAACTATATGTGTGCAACAA+AGG | - | chr7.4:30436206-30436225 | MS.gene92810:CDS | 30.0% | |
| AATTGAATGTTGCAAGGAAA+AGG | - | chr7.4:30438154-30438173 | MS.gene92810:CDS | 30.0% | |
| ACAATAATCCAAGAACCAAT+GGG | + | chr7.4:30437667-30437686 | None:intergenic | 30.0% | |
| AGCGAAATTATACAAATTGC+AGG | - | chr7.4:30437089-30437108 | MS.gene92810:intron | 30.0% | |
| ATTCTCATCCCTATATTCTT+AGG | - | chr7.4:30436967-30436986 | MS.gene92810:intron | 30.0% | |
| ATTGAATGTTGCAAGGAAAA+GGG | - | chr7.4:30438155-30438174 | MS.gene92810:CDS | 30.0% | |
| CTTACATATCTATCGTTACA+TGG | + | chr7.4:30437071-30437090 | None:intergenic | 30.0% | |
| GATCCAAAAAATTTGAAGAC+AGG | + | chr7.4:30436928-30436947 | None:intergenic | 30.0% | |
| GCGAAATTATACAAATTGCA+GGG | - | chr7.4:30437090-30437109 | MS.gene92810:intron | 30.0% | |
| GTGATAAAAAGAACCATTGA+TGG | - | chr7.4:30437287-30437306 | MS.gene92810:intron | 30.0% | |
| TATGCAAAACAAAGAAGAAG+AGG | - | chr7.4:30437391-30437410 | MS.gene92810:intron | 30.0% | |
| TCCAAAAAATTTGAAGACAG+GGG | + | chr7.4:30436926-30436945 | None:intergenic | 30.0% | |
| TCTTCAATAGTTGCAATGAA+TGG | + | chr7.4:30437883-30437902 | None:intergenic | 30.0% | |
| TGTATCACTCTTTATCATAG+TGG | + | chr7.4:30436425-30436444 | None:intergenic | 30.0% | |
| TTAGAAAAGGTTAATGTACC+CGG | - | chr7.4:30435839-30435858 | MS.gene92810:CDS | 30.0% | |
| TTGAACATCCTAATCCAAAA+GGG | - | chr7.4:30437842-30437861 | MS.gene92810:intron | 30.0% | |
| ! | CTAATCATAACTTTTCGTTG+TGG | - | chr7.4:30436060-30436079 | MS.gene92810:intron | 30.0% |
| ! | CTTTTTATCACAATTTCCTC+TGG | + | chr7.4:30437278-30437297 | None:intergenic | 30.0% |
| ! | GTTGAAATTTGGCTCAAAAT+TGG | + | chr7.4:30436890-30436909 | None:intergenic | 30.0% |
| ! | TGTTTTCTCTCTATTTTCTC+CGG | + | chr7.4:30435861-30435880 | None:intergenic | 30.0% |
| ! | TTATATCTCCCTTTTGGATT+AGG | + | chr7.4:30437853-30437872 | None:intergenic | 30.0% |
| !! | AGGTAATGGATGAAAGTTAT+TGG | - | chr7.4:30437411-30437430 | MS.gene92810:intron | 30.0% |
| !! | AGTTTCTTTGAGGTTAAATG+TGG | + | chr7.4:30438080-30438099 | None:intergenic | 30.0% |
| !! | CTAATACCAACTTTTGTTGT+TGG | - | chr7.4:30437554-30437573 | MS.gene92810:intron | 30.0% |
| !!! | ACGATTTTGATTCTTTTCCT+CGG | + | chr7.4:30436840-30436859 | None:intergenic | 30.0% |
| !!! | TTTGGTGAGAGTTTTTTCTT+GGG | + | chr7.4:30436587-30436606 | None:intergenic | 30.0% |
| AAAGGTCCAACAACAAAAGT+TGG | + | chr7.4:30437563-30437582 | None:intergenic | 35.0% | |
| AATATGTGTTTGACCAGGAA+CGG | + | chr7.4:30436950-30436969 | None:intergenic | 35.0% | |
| AATTCCTAATGCTCCATCAA+TGG | + | chr7.4:30437303-30437322 | None:intergenic | 35.0% | |
| ACGATTTCTCAGGATATTCT+AGG | + | chr7.4:30436696-30436715 | None:intergenic | 35.0% | |
| AGTTCACCAGCTTTCTTATT+TGG | - | chr7.4:30437614-30437633 | MS.gene92810:intron | 35.0% | |
| AGTTTCAATGCAGCAATTGA+AGG | - | chr7.4:30437200-30437219 | MS.gene92810:intron | 35.0% | |
| ATAAGAAAGCTGGTGAACTA+TGG | + | chr7.4:30437613-30437632 | None:intergenic | 35.0% | |
| ATGAGAATATGTGTTTGACC+AGG | + | chr7.4:30436955-30436974 | None:intergenic | 35.0% | |
| ATTGCTGCATTGAAACTTTC+TGG | + | chr7.4:30437197-30437216 | None:intergenic | 35.0% | |
| ATTTCGACACGAAGATGATT+AGG | - | chr7.4:30436108-30436127 | MS.gene92810:CDS | 35.0% | |
| ATTTGAATTAAGGGGTTACC+TGG | + | chr7.4:30435662-30435681 | None:intergenic | 35.0% | |
| ATTTGGAGAACAACATGGTT+TGG | - | chr7.4:30437520-30437539 | MS.gene92810:intron | 35.0% | |
| CACAATAATCCAAGAACCAA+TGG | + | chr7.4:30437668-30437687 | None:intergenic | 35.0% | |
| CACTTACCAAATAAGAAAGC+TGG | + | chr7.4:30437623-30437642 | None:intergenic | 35.0% | |
| CTTGAACATCCTAATCCAAA+AGG | - | chr7.4:30437841-30437860 | MS.gene92810:intron | 35.0% | |
| CTTGAATTTGGAGAACAACA+TGG | - | chr7.4:30437515-30437534 | MS.gene92810:intron | 35.0% | |
| GAGAAAGCTGTTCTTGAATT+TGG | - | chr7.4:30437503-30437522 | MS.gene92810:intron | 35.0% | |
| GAGGTTAAATGTGGAAACTT+AGG | + | chr7.4:30438071-30438090 | None:intergenic | 35.0% | |
| GTCCAATAAGACATACTCTA+GGG | - | chr7.4:30436381-30436400 | MS.gene92810:CDS | 35.0% | |
| GTTTCAATGCAGCAATTGAA+GGG | - | chr7.4:30437201-30437220 | MS.gene92810:intron | 35.0% | |
| TAACAGCATAACCATCTTCA+AGG | + | chr7.4:30435619-30435638 | None:intergenic | 35.0% | |
| TAAGGATTCATTGTGAGTGT+GGG | + | chr7.4:30436487-30436506 | None:intergenic | 35.0% | |
| TCAAGAGATAGGAAAACCAA+AGG | + | chr7.4:30436633-30436652 | None:intergenic | 35.0% | |
| TCTTTCAGTTCGAAATCAAC+TGG | + | chr7.4:30437254-30437273 | None:intergenic | 35.0% | |
| TTGCTGCATTGAAACTTTCT+GGG | + | chr7.4:30437196-30437215 | None:intergenic | 35.0% | |
| TTTAACCTCAAAGAAACTCG+TGG | - | chr7.4:30438082-30438101 | MS.gene92810:CDS | 35.0% | |
| TTTCGACACGAAGATGATTA+GGG | - | chr7.4:30436109-30436128 | MS.gene92810:CDS | 35.0% | |
| ! | ATGTTCAAGTATAGCCTTGA+GGG | - | chr7.4:30438116-30438135 | MS.gene92810:CDS | 35.0% |
| ! | CATTTGAAGTTCAGGATACT+TGG | + | chr7.4:30437926-30437945 | None:intergenic | 35.0% |
| ! | GAGCAATTATATCTCCCTTT+TGG | + | chr7.4:30437859-30437878 | None:intergenic | 35.0% |
| ! | GTTTTCTCTCTATTTTCTCC+GGG | + | chr7.4:30435860-30435879 | None:intergenic | 35.0% |
| ! | TCATCTTCTAGAGAGCTTAT+GGG | - | chr7.4:30438035-30438054 | MS.gene92810:intron | 35.0% |
| ! | TTCATCTTCTAGAGAGCTTA+TGG | - | chr7.4:30438034-30438053 | MS.gene92810:intron | 35.0% |
| !! | ACGAGATACAAAAGCACTAA+TGG | + | chr7.4:30437773-30437792 | None:intergenic | 35.0% |
| !! | CACTCTTTATCATAGTGGAT+CGG | + | chr7.4:30436420-30436439 | None:intergenic | 35.0% |
| !!! | AAATTTTTTGGATCCGTTCC+TGG | - | chr7.4:30436934-30436953 | MS.gene92810:intron | 35.0% |
| !!! | CTTTGGTGAGAGTTTTTTCT+TGG | + | chr7.4:30436588-30436607 | None:intergenic | 35.0% |
| !!! | TTTAGCTTTTGGGTTGCATT+TGG | + | chr7.4:30437149-30437168 | None:intergenic | 35.0% |
| AAACCAAAGGAGGGAACTTT+AGG | + | chr7.4:30436620-30436639 | None:intergenic | 40.0% | |
| AAAGGAAGAGTTTGTGTGAC+TGG | - | chr7.4:30435554-30435573 | MS.gene92810:CDS | 40.0% | |
| ACAGCATATGACCAAGCAAA+AGG | + | chr7.4:30437467-30437486 | None:intergenic | 40.0% | |
| ACCACTGTTAGATCTAATCC+AGG | - | chr7.4:30435641-30435660 | MS.gene92810:CDS | 40.0% | |
| AGAGAGCTTATGGGAGTTAA+AGG | - | chr7.4:30438044-30438063 | MS.gene92810:intron | 40.0% | |
| AGAGATAGGAAAACCAAAGG+AGG | + | chr7.4:30436630-30436649 | None:intergenic | 40.0% | |
| ATCAAGAGACTCCTTGAAGA+TGG | - | chr7.4:30435605-30435624 | MS.gene92810:CDS | 40.0% | |
| ATCATCAACATGCACCATAC+CGG | + | chr7.4:30437797-30437816 | None:intergenic | 40.0% | |
| ATCATCCACGAGTTTCTTTG+AGG | + | chr7.4:30438090-30438109 | None:intergenic | 40.0% | |
| ATTTCCAATAGCAAACTCCG+AGG | - | chr7.4:30436820-30436839 | MS.gene92810:intron | 40.0% | |
| CAGGATACTTGGAAGAAACA+AGG | + | chr7.4:30437915-30437934 | None:intergenic | 40.0% | |
| CTAAGGATTCATTGTGAGTG+TGG | + | chr7.4:30436488-30436507 | None:intergenic | 40.0% | |
| CTCCCTAGAGTATGTCTTAT+TGG | + | chr7.4:30436386-30436405 | None:intergenic | 40.0% | |
| CTTCTTACCATGTTTCCCAT+TGG | - | chr7.4:30437649-30437668 | MS.gene92810:intron | 40.0% | |
| GACACCTATGCATGAAATTG+TGG | + | chr7.4:30436795-30436814 | None:intergenic | 40.0% | |
| GAGATAGGAAAACCAAAGGA+GGG | + | chr7.4:30436629-30436648 | None:intergenic | 40.0% | |
| GGTAGCTTAGGACAAATGAA+AGG | + | chr7.4:30437581-30437600 | None:intergenic | 40.0% | |
| GGTCCAATAAGACATACTCT+AGG | - | chr7.4:30436380-30436399 | MS.gene92810:CDS | 40.0% | |
| TCAAAGAAACTCGTGGATGA+TGG | - | chr7.4:30438089-30438108 | MS.gene92810:CDS | 40.0% | |
| TGTAGAACTCACTTGGATGT+TGG | + | chr7.4:30437949-30437968 | None:intergenic | 40.0% | |
| TTCATTTGTCCTAAGCTACC+TGG | - | chr7.4:30437581-30437600 | MS.gene92810:intron | 40.0% | |
| TTGCATTTGGAAGATCTGTG+AGG | + | chr7.4:30437136-30437155 | None:intergenic | 40.0% | |
| TTTAGGGAGCTTCAAGAGAT+AGG | + | chr7.4:30436644-30436663 | None:intergenic | 40.0% | |
| TTTCGAACTGAAAGAACCAG+AGG | - | chr7.4:30437259-30437278 | MS.gene92810:intron | 40.0% | |
| ! | ACCTGGATTAGATCTAACAG+TGG | + | chr7.4:30435645-30435664 | None:intergenic | 40.0% |
| ! | AGAACCATTGATGGAGCATT+AGG | - | chr7.4:30437296-30437315 | MS.gene92810:intron | 40.0% |
| ! | AGTGCTTTTGTATCTCGTAC+CGG | - | chr7.4:30437775-30437794 | MS.gene92810:intron | 40.0% |
| ! | CATGTTCAAGTATAGCCTTG+AGG | - | chr7.4:30438115-30438134 | MS.gene92810:CDS | 40.0% |
| ! | GATGTTGGCATTTGAAGTTC+AGG | + | chr7.4:30437934-30437953 | None:intergenic | 40.0% |
| ! | TATGTCTTATTGGACCGAAC+TGG | + | chr7.4:30436376-30436395 | None:intergenic | 40.0% |
| !! | ACTTTAGGACTAGGTGTCTT+TGG | + | chr7.4:30436605-30436624 | None:intergenic | 40.0% |
| !! | GTACAGGGTTTATTGGTTCA+TGG | - | chr7.4:30435579-30435598 | MS.gene92810:CDS | 40.0% |
| !! | TATGGTGCATGTTGATGATG+TGG | - | chr7.4:30437798-30437817 | MS.gene92810:intron | 40.0% |
| !! | TTTTGTATCTCGTACCGGTA+TGG | - | chr7.4:30437780-30437799 | MS.gene92810:intron | 40.0% |
| !!! | GAACTTTGAAGCCTTTTGCT+TGG | - | chr7.4:30437453-30437472 | MS.gene92810:intron | 40.0% |
| !!! | GCCCCTGTCTTCAAATTTTT+TGG | - | chr7.4:30436922-30436941 | MS.gene92810:intron | 40.0% |
| !!! | TTTTCCTCGGAGTTTGCTAT+TGG | + | chr7.4:30436827-30436846 | None:intergenic | 40.0% |
| AACAACAAATCGTGGCACGA+TGG | + | chr7.4:30436733-30436752 | None:intergenic | 45.0% | |
| AATCAACTGGAGTAGCTGTG+TGG | + | chr7.4:30437241-30437260 | None:intergenic | 45.0% | |
| ACAACAAATCGTGGCACGAT+GGG | + | chr7.4:30436732-30436751 | None:intergenic | 45.0% | |
| AGTCCTAAAGTTCCCTCCTT+TGG | - | chr7.4:30436614-30436633 | MS.gene92810:intron | 45.0% | |
| CAATCGTGGAACGATTTCTC+AGG | + | chr7.4:30436706-30436725 | None:intergenic | 45.0% | |
| CCAAGAACCAATGGGAAACA+TGG | + | chr7.4:30437659-30437678 | None:intergenic | 45.0% | |
| CGTGCCACAATTTCATGCAT+AGG | - | chr7.4:30436788-30436807 | MS.gene92810:intron | 45.0% | |
| CTGAGAAATCGTTCCACGAT+TGG | - | chr7.4:30436704-30436723 | MS.gene92810:intron | 45.0% | |
| GGACGCAATTGAATGTTGCA+AGG | - | chr7.4:30438148-30438167 | MS.gene92810:CDS | 45.0% | |
| GGTGTACCAACAACAAATCG+TGG | + | chr7.4:30436741-30436760 | None:intergenic | 45.0% | |
| TCTTGAGATCTCACTACCCA+AGG | - | chr7.4:30436541-30436560 | MS.gene92810:CDS | 45.0% | |
| TTGGGTAGTGAGATCTCAAG+AGG | + | chr7.4:30436542-30436561 | None:intergenic | 45.0% | |
| ! | ACTGGAGGTACAGGGTTTAT+TGG | - | chr7.4:30435572-30435591 | MS.gene92810:CDS | 45.0% |
| ! | TAGCCTTGAGGGAATGTTTG+AGG | - | chr7.4:30438127-30438146 | MS.gene92810:CDS | 45.0% |
| ! | TTTGTGTGACTGGAGGTACA+GGG | - | chr7.4:30435564-30435583 | MS.gene92810:CDS | 45.0% |
| !! | AAGGAGGGAACTTTAGGACT+AGG | + | chr7.4:30436614-30436633 | None:intergenic | 45.0% |
| !! | ATCGTGCCACGATTTGTTGT+TGG | - | chr7.4:30436732-30436751 | MS.gene92810:intron | 45.0% |
| !! | CCATGTTTCCCATTGGTTCT+TGG | - | chr7.4:30437656-30437675 | MS.gene92810:intron | 45.0% |
| CGTCCTCAAACATTCCCTCA+AGG | + | chr7.4:30438133-30438152 | None:intergenic | 50.0% | |
| GGAAGAGTTTGTGTGACTGG+AGG | - | chr7.4:30435557-30435576 | MS.gene92810:CDS | 50.0% | |
| GGTGAACTATGGACAGATCC+AGG | + | chr7.4:30437602-30437621 | None:intergenic | 50.0% | |
| TGGACAGATCCAGGTAGCTT+AGG | + | chr7.4:30437593-30437612 | None:intergenic | 50.0% | |
| ! | GCAGCAATTGAAGGGTGCAT+TGG | - | chr7.4:30437209-30437228 | MS.gene92810:intron | 50.0% |
| ! | GTTTGTGTGACTGGAGGTAC+AGG | - | chr7.4:30435563-30435582 | MS.gene92810:CDS | 50.0% |
| !! | ACACACAGCAGAAGCACTTG+AGG | + | chr7.4:30437372-30437391 | None:intergenic | 50.0% |
| GGCACGATGGGTGCCAATCG+TGG | + | chr7.4:30436720-30436739 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 30435542 | 30438187 | 30435542 | ID=MS.gene92810 |
| chr7.4 | mRNA | 30435542 | 30438187 | 30435542 | ID=MS.gene92810.t1;Parent=MS.gene92810 |
| chr7.4 | exon | 30438067 | 30438187 | 30438067 | ID=MS.gene92810.t1.exon1;Parent=MS.gene92810.t1 |
| chr7.4 | CDS | 30438067 | 30438187 | 30438067 | ID=cds.MS.gene92810.t1;Parent=MS.gene92810.t1 |
| chr7.4 | exon | 30436094 | 30436618 | 30436094 | ID=MS.gene92810.t1.exon2;Parent=MS.gene92810.t1 |
| chr7.4 | CDS | 30436094 | 30436618 | 30436094 | ID=cds.MS.gene92810.t1;Parent=MS.gene92810.t1 |
| chr7.4 | exon | 30435773 | 30435962 | 30435773 | ID=MS.gene92810.t1.exon3;Parent=MS.gene92810.t1 |
| chr7.4 | CDS | 30435773 | 30435962 | 30435773 | ID=cds.MS.gene92810.t1;Parent=MS.gene92810.t1 |
| chr7.4 | exon | 30435542 | 30435683 | 30435542 | ID=MS.gene92810.t1.exon4;Parent=MS.gene92810.t1 |
| chr7.4 | CDS | 30435542 | 30435683 | 30435542 | ID=cds.MS.gene92810.t1;Parent=MS.gene92810.t1 |
| Gene Sequence |
| Protein sequence |
