Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93643.t1 | XP_024625892.1 | 96.8 | 690 | 22 | 0 | 1 | 690 | 1 | 690 | 0.00E+00 | 1304.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93643.t1 | O60942 | 35.0 | 592 | 331 | 17 | 96 | 665 | 4 | 563 | 5.2e-77 | 290.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93643.t1 | A0A072U100 | 96.8 | 690 | 22 | 0 | 1 | 690 | 1 | 690 | 0.0e+00 | 1304.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene93643 | 0.825953 | 3.54E-54 | -1.69E-46 |
| MS.gene049343 | MS.gene93643 | 0.835787 | 1.37E-56 | -1.69E-46 |
| MS.gene049850 | MS.gene93643 | 0.801753 | 7.76E-49 | -1.69E-46 |
| MS.gene052108 | MS.gene93643 | 0.800307 | 1.53E-48 | -1.69E-46 |
| MS.gene052519 | MS.gene93643 | 0.809976 | 1.45E-50 | -1.69E-46 |
| MS.gene052582 | MS.gene93643 | 0.801754 | 7.75E-49 | -1.69E-46 |
| MS.gene052584 | MS.gene93643 | 0.816064 | 6.70E-52 | -1.69E-46 |
| MS.gene053226 | MS.gene93643 | 0.826684 | 2.37E-54 | -1.69E-46 |
| MS.gene054559 | MS.gene93643 | 0.814625 | 1.40E-51 | -1.69E-46 |
| MS.gene054651 | MS.gene93643 | 0.851753 | 7.23E-61 | -1.69E-46 |
| MS.gene054657 | MS.gene93643 | 0.820968 | 5.18E-53 | -1.69E-46 |
| MS.gene055589 | MS.gene93643 | 0.800523 | 1.38E-48 | -1.69E-46 |
| MS.gene055818 | MS.gene93643 | 0.807919 | 4.00E-50 | -1.69E-46 |
| MS.gene056050 | MS.gene93643 | 0.803966 | 2.71E-49 | -1.69E-46 |
| MS.gene056173 | MS.gene93643 | 0.800755 | 1.24E-48 | -1.69E-46 |
| MS.gene056366 | MS.gene93643 | 0.846892 | 1.63E-59 | -1.69E-46 |
| MS.gene056595 | MS.gene93643 | 0.803968 | 2.71E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene93643 | 0.827226 | 1.76E-54 | -1.69E-46 |
| MS.gene057444 | MS.gene93643 | 0.843916 | 1.04E-58 | -1.69E-46 |
| MS.gene057855 | MS.gene93643 | 0.802503 | 5.44E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene93643 | 0.822198 | 2.69E-53 | -1.69E-46 |
| MS.gene058979 | MS.gene93643 | 0.820127 | 8.08E-53 | -1.69E-46 |
| MS.gene060572 | MS.gene93643 | 0.815073 | 1.11E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene93643 | MS.gene052776 | PPI |
| MS.gene93389 | MS.gene93643 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93643.t1 | MTR_7g066810 | 97.391 | 690 | 18 | 0 | 1 | 690 | 1 | 690 | 0.0 | 1396 |
| MS.gene93643.t1 | MTR_4g014920 | 78.902 | 692 | 130 | 6 | 1 | 687 | 1 | 681 | 0.0 | 1079 |
| MS.gene93643.t1 | MTR_4g014920 | 79.215 | 688 | 127 | 6 | 5 | 687 | 1 | 677 | 0.0 | 1073 |
| MS.gene93643.t1 | MTR_4g014920 | 78.221 | 652 | 126 | 6 | 1 | 647 | 1 | 641 | 0.0 | 1015 |
| MS.gene93643.t1 | MTR_4g014920 | 79.210 | 582 | 105 | 6 | 1 | 577 | 1 | 571 | 0.0 | 910 |
| MS.gene93643.t1 | MTR_7g094670 | 62.693 | 646 | 219 | 9 | 53 | 690 | 2 | 633 | 0.0 | 819 |
| MS.gene93643.t1 | MTR_7g068260 | 53.205 | 156 | 23 | 2 | 474 | 629 | 29 | 134 | 1.57e-42 | 150 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93643.t1 | AT3G09100 | 66.619 | 695 | 204 | 9 | 1 | 690 | 1 | 672 | 0.0 | 911 |
| MS.gene93643.t1 | AT5G01290 | 63.623 | 690 | 214 | 11 | 5 | 690 | 1 | 657 | 0.0 | 851 |
| MS.gene93643.t1 | AT5G28210 | 56.053 | 603 | 224 | 16 | 98 | 690 | 48 | 619 | 0.0 | 645 |
| MS.gene93643.t1 | AT3G09100 | 64.435 | 478 | 148 | 5 | 1 | 474 | 1 | 460 | 0.0 | 606 |
Find 147 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTTCCATCATATGATTTA+AGG | 0.113031 | 7.1:-35001679 | None:intergenic |
| TATATGACATGGAGCCTTTC+AGG | 0.186417 | 7.1:+35007612 | MS.gene93643:CDS |
| CTGCTTTCAGATACTCAAAT+TGG | 0.211849 | 7.1:+35004761 | MS.gene93643:CDS |
| ATGATTTAAGGATCTTATTA+TGG | 0.232235 | 7.1:-35001667 | None:intergenic |
| AATGACAAACGATGATGTTT+TGG | 0.244746 | 7.1:+35004695 | MS.gene93643:CDS |
| TCAGACCCCATGCTTTATTC+TGG | 0.261086 | 7.1:+35009221 | MS.gene93643:CDS |
| ATGGTACCGTTCATGATTCC+TGG | 0.271885 | 7.1:-35007570 | None:intergenic |
| CCACTTTCTATGTGCTCTTC+TGG | 0.283156 | 7.1:-35000685 | None:intergenic |
| TTTCGGCATGATACCTTCTA+AGG | 0.285277 | 7.1:+35002266 | MS.gene93643:CDS |
| GCAGGACAGACTATCGTTTC+AGG | 0.301819 | 7.1:-35003595 | None:intergenic |
| CTTGAATGCCTCTCCTTTGC+CGG | 0.304993 | 7.1:+35000582 | MS.gene93643:CDS |
| TGCAGATGGTCTCATATTTC+AGG | 0.317211 | 7.1:+35007802 | MS.gene93643:CDS |
| TTGGACCTGTCTAAAGAAAC+TGG | 0.317774 | 7.1:-35005757 | None:intergenic |
| CCACCATCAGATCATATATT+AGG | 0.330860 | 7.1:-35006646 | None:intergenic |
| ATATATGATGCTAATAACTA+TGG | 0.345799 | 7.1:+35006349 | MS.gene93643:CDS |
| TACTCAGGTTTATAGATTCC+TGG | 0.355706 | 7.1:-35003535 | None:intergenic |
| CACCACTTCACATTACTTGA+TGG | 0.363178 | 7.1:+35006572 | MS.gene93643:CDS |
| TCATCATCGTCATCATTATC+TGG | 0.364129 | 7.1:-35003673 | None:intergenic |
| TCTTTCTTTAGATCTGATAC+TGG | 0.364157 | 7.1:-35002652 | None:intergenic |
| TGCTTTCAGATACTCAAATT+GGG | 0.364970 | 7.1:+35004762 | MS.gene93643:CDS |
| CTTGTAAGTATTGAAGTCAT+TGG | 0.367108 | 7.1:-35009321 | None:intergenic |
| ACTTGCACGGGCCTGTCATC+TGG | 0.368081 | 7.1:-35001614 | None:intergenic |
| TCTTATCCTGTCGGCATACA+TGG | 0.371242 | 7.1:-35009506 | None:intergenic |
| CGTTGGCTTGCAGCTTGGTC+TGG | 0.378002 | 7.1:+35002597 | MS.gene93643:intron |
| CCATTGAGATCAACAAGTTC+GGG | 0.379557 | 7.1:-35003640 | None:intergenic |
| TGGAAATTGCATGTGTCCTC+TGG | 0.394540 | 7.1:-35005725 | None:intergenic |
| AATGCATCTTGCTGATCATT+AGG | 0.395304 | 7.1:-35004729 | None:intergenic |
| ATGATCAGCAAGATGCATTT+CGG | 0.401431 | 7.1:+35004733 | MS.gene93643:CDS |
| ACACTGTGCGCATTAGATAA+TGG | 0.402849 | 7.1:-35003375 | None:intergenic |
| ACCATTGAGATCAACAAGTT+CGG | 0.403010 | 7.1:-35003641 | None:intergenic |
| GTGTGTAATGACGATTTCTA+TGG | 0.403386 | 7.1:+35000558 | None:intergenic |
| TCTCGTTTATTTCAGTCAAC+AGG | 0.403952 | 7.1:-35009471 | None:intergenic |
| AGAGGACACATGCAATTTCC+AGG | 0.406784 | 7.1:+35005727 | MS.gene93643:CDS |
| TGGTTGGATTGCCCTTCGTC+TGG | 0.413355 | 7.1:+35002234 | MS.gene93643:CDS |
| TCAGCCAATGGAACCTTAGA+AGG | 0.417398 | 7.1:-35002279 | None:intergenic |
| CTGAGCCGCGGCCCTTGCAT+TGG | 0.430652 | 7.1:-35002812 | None:intergenic |
| CTCTTCCACTCCGGAGTAGC+AGG | 0.432247 | 7.1:-35003613 | None:intergenic |
| CTGCTACTCCGGAGTGGAAG+AGG | 0.435765 | 7.1:+35003614 | MS.gene93643:CDS |
| GAAAGATCATCGAGTGTGCT+TGG | 0.437704 | 7.1:+35009243 | MS.gene93643:CDS |
| TTGTAAGTATTGAAGTCATT+GGG | 0.442744 | 7.1:-35009320 | None:intergenic |
| TTCAAATGAGGTTTCCATGC+AGG | 0.443363 | 7.1:+35006414 | MS.gene93643:CDS |
| AGAGGGTATCAAGCATGTTA+AGG | 0.443861 | 7.1:+35002672 | MS.gene93643:CDS |
| TCATTATTGTGTCAATCTCA+TGG | 0.446224 | 7.1:-35004677 | None:intergenic |
| GGGTTTATTGTTGCATTTGA+AGG | 0.449536 | 7.1:+35008532 | MS.gene93643:CDS |
| GGATTGCCCTTCGTCTGGCC+AGG | 0.452831 | 7.1:+35002239 | MS.gene93643:CDS |
| GTATCATGCCGAAAATTTCC+TGG | 0.453234 | 7.1:-35002257 | None:intergenic |
| CACACCCAGTTTCTTTAGAC+AGG | 0.457416 | 7.1:+35005752 | MS.gene93643:CDS |
| CCAGAAGAGCACATAGAAAG+TGG | 0.461582 | 7.1:+35000685 | MS.gene93643:CDS |
| AGTGTCAATGTCTGTTACTC+AGG | 0.463857 | 7.1:+35003393 | MS.gene93643:CDS |
| GATAGTCTGTCCTGCTACTC+CGG | 0.471499 | 7.1:+35003603 | MS.gene93643:CDS |
| TCTTCGACCTGGCCCTCAAA+AGG | 0.473582 | 7.1:-35000619 | None:intergenic |
| TCCATGTCATATATATAGTA+AGG | 0.476655 | 7.1:-35007602 | None:intergenic |
| TGATTGACAGATGAATTATC+AGG | 0.486142 | 7.1:-35002837 | None:intergenic |
| ACCACTTCACATTACTTGAT+GGG | 0.490316 | 7.1:+35006573 | MS.gene93643:CDS |
| AGTGGTGAGTCTTCTCTGCC+AGG | 0.491260 | 7.1:-35006556 | None:intergenic |
| CTCATGAAGGTCTCTTAAAG+TGG | 0.491856 | 7.1:+35008291 | MS.gene93643:CDS |
| CCCGAACTTGTTGATCTCAA+TGG | 0.492780 | 7.1:+35003640 | MS.gene93643:CDS |
| TTATTTACATGCAGGTTGGT+TGG | 0.495751 | 7.1:+35002218 | MS.gene93643:intron |
| GATACCTTCTAAGGTTCCAT+TGG | 0.497670 | 7.1:+35002275 | MS.gene93643:CDS |
| AGTATCAGATCTAAAGAAAG+AGG | 0.498017 | 7.1:+35002654 | MS.gene93643:CDS |
| TCTGCATCGTGTGAGAGCTT+CGG | 0.500300 | 7.1:-35007785 | None:intergenic |
| TCATGAGTACGAGGTACATA+AGG | 0.503688 | 7.1:-35008275 | None:intergenic |
| TGATGGAAGTAAGCTTCCTC+CGG | 0.506250 | 7.1:+35001691 | MS.gene93643:CDS |
| AAGATCCTTAAATCATATGA+TGG | 0.512777 | 7.1:+35001674 | MS.gene93643:CDS |
| TGGAGCTGATATAGCTCGCC+GGG | 0.516184 | 7.1:+35000705 | MS.gene93643:CDS |
| TGGTACCGTTCATGATTCCT+GGG | 0.518111 | 7.1:-35007569 | None:intergenic |
| TATGAAATTCATACTTGCAA+CGG | 0.519874 | 7.1:-35003715 | None:intergenic |
| TCAAATGAGGTTTCCATGCA+GGG | 0.525334 | 7.1:+35006415 | MS.gene93643:CDS |
| AAAGAAACTGGGTGTGACCC+TGG | 0.527134 | 7.1:-35005745 | None:intergenic |
| AGGTAATATATCGTCATTGA+AGG | 0.527491 | 7.1:-35002304 | None:intergenic |
| ATCTTTCCAGAATAAAGCAT+GGG | 0.532742 | 7.1:-35009227 | None:intergenic |
| ACATCATTTGCAACCCTGCA+TGG | 0.534363 | 7.1:-35006428 | None:intergenic |
| AAAGGATCTTCATCTTCCTC+CGG | 0.535591 | 7.1:-35000601 | None:intergenic |
| GCCTTCCCATGTATGCCGAC+AGG | 0.536050 | 7.1:+35009500 | MS.gene93643:CDS |
| GGGTGGCTGTGATACTTGCA+CGG | 0.537496 | 7.1:-35001627 | None:intergenic |
| ATATGACATGGAGCCTTTCA+GGG | 0.538294 | 7.1:+35007613 | MS.gene93643:CDS |
| TCGGGAGCCCTCTTCCACTC+CGG | 0.539359 | 7.1:-35003622 | None:intergenic |
| AAAGAGAGCGTCCAGATGAC+AGG | 0.539782 | 7.1:+35001603 | MS.gene93643:CDS |
| CAACTGCGTGTCTGTGATAG+AGG | 0.543146 | 7.1:+35006670 | MS.gene93643:CDS |
| ATCTTCCACCGCTCACAGAA+AGG | 0.545618 | 7.1:-35007524 | None:intergenic |
| GCTTTCAGATACTCAAATTG+GGG | 0.546530 | 7.1:+35004763 | MS.gene93643:CDS |
| TATAATGAATCAATATACTC+AGG | 0.549904 | 7.1:-35003550 | None:intergenic |
| TCTTCATCTTCCTCCGGCAA+AGG | 0.550629 | 7.1:-35000595 | None:intergenic |
| TCAGAAATGCATACCCTGAA+AGG | 0.550897 | 7.1:-35007626 | None:intergenic |
| GCTATCGATTCTTATCCTGT+CGG | 0.551715 | 7.1:-35009515 | None:intergenic |
| ATACCTAATATATGATCTGA+TGG | 0.554386 | 7.1:+35006643 | MS.gene93643:CDS |
| TTCAGTCAACAGGACATCCT+CGG | 0.555159 | 7.1:-35009461 | None:intergenic |
| TAGATCCAATGCAAGGGCCG+CGG | 0.559315 | 7.1:+35002807 | MS.gene93643:intron |
| TGCTACTCCGGAGTGGAAGA+GGG | 0.559470 | 7.1:+35003615 | MS.gene93643:CDS |
| CATACTTGCAACGGAGGACC+TGG | 0.559887 | 7.1:-35003706 | None:intergenic |
| GCAAAGGACATCATGTAGCT+AGG | 0.560997 | 7.1:+35009536 | MS.gene93643:CDS |
| ATCTTCCTCCGGCAAAGGAG+AGG | 0.560999 | 7.1:-35000590 | None:intergenic |
| AAAGATCATCGAGTGTGCTT+GGG | 0.561891 | 7.1:+35009244 | MS.gene93643:CDS |
| TCCTGTCGGCATACATGGGA+AGG | 0.564005 | 7.1:-35009501 | None:intergenic |
| GGTGGCTGTGATACTTGCAC+GGG | 0.564468 | 7.1:-35001626 | None:intergenic |
| AATGATGACGATGATGATGA+TGG | 0.565460 | 7.1:+35003679 | MS.gene93643:CDS |
| TATGCAACATGGAAAGCTGA+TGG | 0.568109 | 7.1:+35006320 | MS.gene93643:CDS |
| AGCAGCGGCCTTTCTGTGAG+CGG | 0.568282 | 7.1:+35007516 | MS.gene93643:intron |
| AAAATTTCCTGGCCAGACGA+AGG | 0.570217 | 7.1:-35002246 | None:intergenic |
| GCGCATTATACTCTTCGACC+TGG | 0.572801 | 7.1:-35000630 | None:intergenic |
| AAATTTCCTGGCCAGACGAA+GGG | 0.572890 | 7.1:-35002245 | None:intergenic |
| TCATTGAAGGATTCAGCCAA+TGG | 0.578421 | 7.1:-35002291 | None:intergenic |
| CCCCATCAAGTAATGTGAAG+TGG | 0.580537 | 7.1:-35006574 | None:intergenic |
| ACACATGGTCACAATCGTAC+AGG | 0.581359 | 7.1:+35003340 | MS.gene93643:CDS |
| ATGATGCTAATAACTATGGA+TGG | 0.584416 | 7.1:+35006353 | MS.gene93643:CDS |
| TATGTACCTCGTACTCATGA+AGG | 0.587394 | 7.1:+35008278 | MS.gene93643:CDS |
| TGTGGTTTAGATCCAATGCA+AGG | 0.587594 | 7.1:+35002800 | MS.gene93643:intron |
| AGCGGCCTTTCTGTGAGCGG+TGG | 0.587890 | 7.1:+35007519 | MS.gene93643:intron |
| GATGATGATGATGGAGTACC+AGG | 0.588112 | 7.1:+35003688 | MS.gene93643:CDS |
| TGACTTCAATACTTACAAGA+AGG | 0.590135 | 7.1:+35009325 | MS.gene93643:CDS |
| CTTATCCTGTCGGCATACAT+GGG | 0.592745 | 7.1:-35009505 | None:intergenic |
| AAGCTCTCACACGATGCAGA+TGG | 0.598190 | 7.1:+35007788 | MS.gene93643:CDS |
| GATGGAAGTAAGCTTCCTCC+GGG | 0.598868 | 7.1:+35001692 | MS.gene93643:CDS |
| GTGGAGCTGATATAGCTCGC+CGG | 0.603735 | 7.1:+35000704 | MS.gene93643:CDS |
| GAATGCCTCTCCTTTGCCGG+AGG | 0.607982 | 7.1:+35000585 | MS.gene93643:CDS |
| CCACTTCACATTACTTGATG+GGG | 0.609587 | 7.1:+35006574 | MS.gene93643:CDS |
| TTCAATGACGATATATTACC+TGG | 0.609968 | 7.1:+35002306 | MS.gene93643:CDS |
| TTTCTGAATGTGCAGGCCAG+AGG | 0.611157 | 7.1:+35005709 | MS.gene93643:intron |
| TCTGAAATGATTAGGTGAGG+AGG | 0.612439 | 7.1:+35007711 | MS.gene93643:intron |
| GATCTTTCCAGAATAAAGCA+TGG | 0.617360 | 7.1:-35009228 | None:intergenic |
| GTGGTTTAGATCCAATGCAA+GGG | 0.629105 | 7.1:+35002801 | MS.gene93643:intron |
| ATACTTGTTCATTGTACACA+TGG | 0.630429 | 7.1:+35003325 | MS.gene93643:CDS |
| GAAATTCATACTTGCAACGG+AGG | 0.631537 | 7.1:-35003712 | None:intergenic |
| TCCTTACTATATATATGACA+TGG | 0.631783 | 7.1:+35007601 | MS.gene93643:CDS |
| GCGCAATATATTCTTCGACC+TGG | 0.634430 | 7.1:-35000663 | None:intergenic |
| AGGATAAGAATCGATAGCAA+AGG | 0.635554 | 7.1:+35009520 | MS.gene93643:CDS |
| TATAGTAAGGATGTTTGCGA+TGG | 0.637258 | 7.1:-35007589 | None:intergenic |
| GTATCAGATCTAAAGAAAGA+GGG | 0.640851 | 7.1:+35002655 | MS.gene93643:CDS |
| TGTCAATCACTTTGTGTACG+AGG | 0.643052 | 7.1:+35002851 | MS.gene93643:CDS |
| TCTGTCCTGCTACTCCGGAG+TGG | 0.644223 | 7.1:+35003608 | MS.gene93643:CDS |
| TGGACCTGTCTAAAGAAACT+GGG | 0.648364 | 7.1:-35005756 | None:intergenic |
| GAGGACACATGCAATTTCCA+GGG | 0.649406 | 7.1:+35005728 | MS.gene93643:CDS |
| AGAAAGAAGTGATTGAACCC+AGG | 0.649900 | 7.1:+35007552 | MS.gene93643:CDS |
| ATGTTGCATAGTAGTAACGC+TGG | 0.651191 | 7.1:-35006307 | None:intergenic |
| AACGTGAAGAAAGAAAGAAA+CGG | 0.652918 | 7.1:+35001576 | MS.gene93643:CDS |
| CCTAATATATGATCTGATGG+TGG | 0.665073 | 7.1:+35006646 | MS.gene93643:CDS |
| AGCGTTACTACTATGCAACA+TGG | 0.671428 | 7.1:+35006309 | MS.gene93643:CDS |
| CTTTCAGATACTCAAATTGG+GGG | 0.674339 | 7.1:+35004764 | MS.gene93643:CDS |
| AATTATCAGGTACTGAGCCG+CGG | 0.676080 | 7.1:-35002824 | None:intergenic |
| TGTCGGCATACATGGGAAGG+CGG | 0.676239 | 7.1:-35009498 | None:intergenic |
| ATCATCGAGTGTGCTTGGGA+TGG | 0.677706 | 7.1:+35009248 | MS.gene93643:CDS |
| TTGAACCCAGGAATCATGAA+CGG | 0.698189 | 7.1:+35007564 | MS.gene93643:CDS |
| TCTTTCCAGAATAAAGCATG+GGG | 0.710208 | 7.1:-35009226 | None:intergenic |
| AAGAGACCTTCATGAGTACG+AGG | 0.716715 | 7.1:-35008284 | None:intergenic |
| TCAGGTTTATAGATTCCTGG+AGG | 0.718001 | 7.1:-35003532 | None:intergenic |
| GGGATGGTGATAGAAACGAA+TGG | 0.727257 | 7.1:+35009264 | MS.gene93643:CDS |
| CATAAAAGACAATATCACCG+AGG | 0.749317 | 7.1:+35009444 | MS.gene93643:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 35000565 | 35009567 | 35000565 | ID=MS.gene93643 |
| chr7.1 | mRNA | 35000565 | 35009567 | 35000565 | ID=MS.gene93643.t1;Parent=MS.gene93643 |
| chr7.1 | exon | 35000565 | 35000726 | 35000565 | ID=MS.gene93643.t1.exon1;Parent=MS.gene93643.t1 |
| chr7.1 | CDS | 35000565 | 35000726 | 35000565 | ID=cds.MS.gene93643.t1;Parent=MS.gene93643.t1 |
| chr7.1 | exon | 35001575 | 35001713 | 35001575 | ID=MS.gene93643.t1.exon2;Parent=MS.gene93643.t1 |
| chr7.1 | CDS | 35001575 | 35001713 | 35001575 | ID=cds.MS.gene93643.t1;Parent=MS.gene93643.t1 |
| chr7.1 | exon | 35002232 | 35002383 | 35002232 | ID=MS.gene93643.t1.exon3;Parent=MS.gene93643.t1 |
| chr7.1 | CDS | 35002232 | 35002383 | 35002232 | ID=cds.MS.gene93643.t1;Parent=MS.gene93643.t1 |
| chr7.1 | exon | 35002610 | 35002693 | 35002610 | ID=MS.gene93643.t1.exon4;Parent=MS.gene93643.t1 |
| chr7.1 | CDS | 35002610 | 35002693 | 35002610 | ID=cds.MS.gene93643.t1;Parent=MS.gene93643.t1 |
| chr7.1 | exon | 35002810 | 35002872 | 35002810 | ID=MS.gene93643.t1.exon5;Parent=MS.gene93643.t1 |
| chr7.1 | CDS | 35002810 | 35002872 | 35002810 | ID=cds.MS.gene93643.t1;Parent=MS.gene93643.t1 |
| chr7.1 | exon | 35003283 | 35003414 | 35003283 | ID=MS.gene93643.t1.exon6;Parent=MS.gene93643.t1 |
| chr7.1 | CDS | 35003283 | 35003414 | 35003283 | ID=cds.MS.gene93643.t1;Parent=MS.gene93643.t1 |
| chr7.1 | exon | 35003505 | 35003723 | 35003505 | ID=MS.gene93643.t1.exon7;Parent=MS.gene93643.t1 |
| chr7.1 | CDS | 35003505 | 35003723 | 35003505 | ID=cds.MS.gene93643.t1;Parent=MS.gene93643.t1 |
| chr7.1 | exon | 35004672 | 35004791 | 35004672 | ID=MS.gene93643.t1.exon8;Parent=MS.gene93643.t1 |
| chr7.1 | CDS | 35004672 | 35004791 | 35004672 | ID=cds.MS.gene93643.t1;Parent=MS.gene93643.t1 |
| chr7.1 | exon | 35005724 | 35005773 | 35005724 | ID=MS.gene93643.t1.exon9;Parent=MS.gene93643.t1 |
| chr7.1 | CDS | 35005724 | 35005773 | 35005724 | ID=cds.MS.gene93643.t1;Parent=MS.gene93643.t1 |
| chr7.1 | exon | 35006286 | 35006448 | 35006286 | ID=MS.gene93643.t1.exon10;Parent=MS.gene93643.t1 |
| chr7.1 | CDS | 35006286 | 35006448 | 35006286 | ID=cds.MS.gene93643.t1;Parent=MS.gene93643.t1 |
| chr7.1 | exon | 35006554 | 35006691 | 35006554 | ID=MS.gene93643.t1.exon11;Parent=MS.gene93643.t1 |
| chr7.1 | CDS | 35006554 | 35006691 | 35006554 | ID=cds.MS.gene93643.t1;Parent=MS.gene93643.t1 |
| chr7.1 | exon | 35007521 | 35007634 | 35007521 | ID=MS.gene93643.t1.exon12;Parent=MS.gene93643.t1 |
| chr7.1 | CDS | 35007521 | 35007634 | 35007521 | ID=cds.MS.gene93643.t1;Parent=MS.gene93643.t1 |
| chr7.1 | exon | 35007725 | 35007823 | 35007725 | ID=MS.gene93643.t1.exon13;Parent=MS.gene93643.t1 |
| chr7.1 | CDS | 35007725 | 35007823 | 35007725 | ID=cds.MS.gene93643.t1;Parent=MS.gene93643.t1 |
| chr7.1 | exon | 35008263 | 35008352 | 35008263 | ID=MS.gene93643.t1.exon14;Parent=MS.gene93643.t1 |
| chr7.1 | CDS | 35008263 | 35008352 | 35008263 | ID=cds.MS.gene93643.t1;Parent=MS.gene93643.t1 |
| chr7.1 | exon | 35008472 | 35008553 | 35008472 | ID=MS.gene93643.t1.exon15;Parent=MS.gene93643.t1 |
| chr7.1 | CDS | 35008472 | 35008553 | 35008472 | ID=cds.MS.gene93643.t1;Parent=MS.gene93643.t1 |
| chr7.1 | exon | 35009216 | 35009346 | 35009216 | ID=MS.gene93643.t1.exon16;Parent=MS.gene93643.t1 |
| chr7.1 | CDS | 35009216 | 35009346 | 35009216 | ID=cds.MS.gene93643.t1;Parent=MS.gene93643.t1 |
| chr7.1 | exon | 35009433 | 35009567 | 35009433 | ID=MS.gene93643.t1.exon17;Parent=MS.gene93643.t1 |
| chr7.1 | CDS | 35009433 | 35009567 | 35009433 | ID=cds.MS.gene93643.t1;Parent=MS.gene93643.t1 |
| Gene Sequence |
| Protein sequence |
