Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95282.t1 | XP_013444655.1 | 100 | 190 | 0 | 0 | 1 | 190 | 1 | 190 | 3.20E-105 | 391 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95282.t1 | Q84MC7 | 81.1 | 175 | 32 | 1 | 10 | 183 | 12 | 186 | 1.2e-79 | 297.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95282.t1 | G8A086 | 100.0 | 190 | 0 | 0 | 1 | 190 | 1 | 190 | 2.3e-105 | 391.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene013622 | MS.gene95282 | PPI |
| MS.gene95282 | MS.gene046813 | PPI |
| MS.gene95282 | MS.gene06745 | PPI |
| MS.gene057109 | MS.gene95282 | PPI |
| MS.gene057108 | MS.gene95282 | PPI |
| MS.gene32355 | MS.gene95282 | PPI |
| MS.gene95282 | MS.gene057110 | PPI |
| MS.gene84133 | MS.gene95282 | PPI |
| MS.gene95282 | MS.gene06744 | PPI |
| MS.gene95282 | MS.gene31808 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95282.t1 | MTR_8g027805 | 100.000 | 190 | 0 | 0 | 1 | 190 | 1 | 190 | 1.04e-142 | 395 |
| MS.gene95282.t1 | MTR_3g090980 | 75.269 | 186 | 45 | 1 | 3 | 187 | 5 | 190 | 3.08e-103 | 295 |
| MS.gene95282.t1 | MTR_1g028380 | 71.739 | 184 | 52 | 0 | 4 | 187 | 5 | 188 | 1.22e-100 | 288 |
| MS.gene95282.t1 | MTR_3g071740 | 54.777 | 157 | 66 | 3 | 21 | 175 | 69 | 222 | 2.28e-58 | 183 |
| MS.gene95282.t1 | MTR_7g070050 | 55.689 | 167 | 68 | 3 | 18 | 178 | 13 | 179 | 7.85e-57 | 177 |
| MS.gene95282.t1 | MTR_5g083270 | 52.500 | 160 | 70 | 3 | 21 | 177 | 49 | 205 | 9.06e-57 | 178 |
| MS.gene95282.t1 | MTR_4g014460 | 48.447 | 161 | 82 | 1 | 18 | 177 | 49 | 209 | 1.69e-53 | 170 |
| MS.gene95282.t1 | MTR_1g016480 | 46.512 | 172 | 90 | 2 | 4 | 174 | 26 | 196 | 9.98e-53 | 167 |
| MS.gene95282.t1 | MTR_5g030500 | 45.856 | 181 | 90 | 4 | 1 | 175 | 28 | 206 | 1.16e-49 | 160 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95282.t1 | AT1G01360 | 78.689 | 183 | 36 | 2 | 1 | 180 | 1 | 183 | 4.50e-105 | 300 |
| MS.gene95282.t1 | AT5G53160 | 76.923 | 182 | 42 | 0 | 3 | 184 | 4 | 185 | 1.57e-104 | 298 |
| MS.gene95282.t1 | AT4G01026 | 75.568 | 176 | 43 | 0 | 11 | 186 | 16 | 191 | 6.78e-99 | 285 |
| MS.gene95282.t1 | AT4G27920 | 69.189 | 185 | 53 | 2 | 3 | 186 | 2 | 183 | 9.33e-96 | 276 |
| MS.gene95282.t1 | AT5G53160 | 74.783 | 115 | 29 | 0 | 3 | 117 | 4 | 118 | 3.06e-60 | 185 |
| MS.gene95282.t1 | AT5G05440 | 52.761 | 163 | 72 | 3 | 16 | 176 | 43 | 202 | 3.01e-55 | 174 |
| MS.gene95282.t1 | AT2G38310 | 53.939 | 165 | 71 | 3 | 20 | 182 | 41 | 202 | 3.57e-54 | 171 |
| MS.gene95282.t1 | AT2G40330 | 50.000 | 164 | 78 | 3 | 16 | 175 | 46 | 209 | 1.39e-52 | 167 |
| MS.gene95282.t1 | AT4G17870 | 49.080 | 163 | 81 | 1 | 18 | 178 | 17 | 179 | 9.23e-50 | 159 |
| MS.gene95282.t1 | AT2G26040 | 46.835 | 158 | 79 | 3 | 18 | 171 | 22 | 178 | 3.41e-49 | 158 |
| MS.gene95282.t1 | AT1G73000 | 39.560 | 182 | 98 | 3 | 4 | 174 | 24 | 204 | 1.20e-44 | 147 |
| MS.gene95282.t1 | AT5G46790 | 49.405 | 168 | 80 | 2 | 15 | 177 | 41 | 208 | 4.33e-44 | 146 |
| MS.gene95282.t1 | AT5G46790 | 49.405 | 168 | 80 | 2 | 15 | 177 | 41 | 208 | 4.33e-44 | 146 |
| MS.gene95282.t1 | AT5G45860 | 54.362 | 149 | 66 | 2 | 31 | 178 | 10 | 157 | 5.73e-43 | 141 |
| MS.gene95282.t1 | AT5G45870 | 53.378 | 148 | 66 | 2 | 31 | 177 | 10 | 155 | 3.28e-42 | 139 |
| MS.gene95282.t1 | AT4G18620 | 45.570 | 158 | 79 | 1 | 27 | 177 | 5 | 162 | 2.09e-38 | 130 |
Find 50 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACATCACAAACATGATTTA+AGG | 0.199874 | 8.1:-74138132 | MS.gene95282:CDS |
| ATAATACACCTGCTAATAAA+TGG | 0.258954 | 8.1:+74137405 | None:intergenic |
| CTCCGGATGGACCGTGATTA+TGG | 0.262972 | 8.1:+74136755 | None:intergenic |
| GATGATGAGGAACATATTCT+TGG | 0.320325 | 8.1:-74137291 | MS.gene95282:CDS |
| TCGTCCTTCGTGTTCCCTTC+AGG | 0.331294 | 8.1:+74136678 | None:intergenic |
| AGGAACATATTCTTGGTATC+AGG | 0.338682 | 8.1:-74137284 | MS.gene95282:CDS |
| TCTTATGGGTTAATATTGAT+AGG | 0.355002 | 8.1:+74136564 | None:intergenic |
| CTCGGAGAGGATGGCCGTGC+AGG | 0.374882 | 8.1:-74136598 | MS.gene95282:CDS |
| AATATAAACCATTTATTAGC+AGG | 0.415514 | 8.1:-74137413 | MS.gene95282:CDS |
| ATTCTTGGTATCAGGATTGT+TGG | 0.418206 | 8.1:-74137276 | MS.gene95282:CDS |
| GGACGAAACTTGTTACTTTG+TGG | 0.425400 | 8.1:-74136661 | MS.gene95282:CDS |
| CTCTTACACTTCCAATACTA+AGG | 0.431766 | 8.1:+74137373 | None:intergenic |
| AGAGAAGTGAATGTTAAATC+TGG | 0.439454 | 8.1:-74137354 | MS.gene95282:CDS |
| ACATCACAAACATGATTTAA+GGG | 0.442195 | 8.1:-74138131 | MS.gene95282:CDS |
| GTCCATCCGGAGGTTATTGA+TGG | 0.445208 | 8.1:-74136744 | MS.gene95282:CDS |
| AAAGTACTAACAAGATGAAC+TGG | 0.454898 | 8.1:+74138067 | None:intergenic |
| TTCCATAATCACGGTCCATC+CGG | 0.461069 | 8.1:-74136757 | MS.gene95282:CDS |
| CTCTCAGTACTTGTTGTAGC+TGG | 0.467121 | 8.1:+74137327 | None:intergenic |
| ACTTTGTGGAGGCGTTGATT+AGG | 0.470355 | 8.1:-74136647 | MS.gene95282:CDS |
| ATGCAAGGGGACCTTAGTAT+TGG | 0.479015 | 8.1:-74137384 | MS.gene95282:CDS |
| CTTGGTATCAGGATTGTTGG+TGG | 0.526123 | 8.1:-74137273 | MS.gene95282:CDS |
| AGCTGATGTCTCGGAGAGGA+TGG | 0.526503 | 8.1:-74136607 | MS.gene95282:CDS |
| TGGGTTAATATTGATAGGAT+CGG | 0.527439 | 8.1:+74136569 | None:intergenic |
| ATAAATGGTTTATATTTCTG+TGG | 0.528070 | 8.1:+74137420 | None:intergenic |
| ATTAGCAGGTGTATTATGCA+AGG | 0.536200 | 8.1:-74137399 | MS.gene95282:CDS |
| TACAACAAGTACTGAGAGGT+TGG | 0.543951 | 8.1:-74137322 | MS.gene95282:CDS |
| TCGGAGAGGATGGCCGTGCA+GGG | 0.544070 | 8.1:-74136597 | MS.gene95282:CDS |
| AGACATCAGCTAAAGAACTT+AGG | 0.546542 | 8.1:+74136619 | None:intergenic |
| TTAGCAGGTGTATTATGCAA+GGG | 0.549978 | 8.1:-74137398 | MS.gene95282:CDS |
| GATTCAATCACCATTGTACC+TGG | 0.555628 | 8.1:+74136717 | None:intergenic |
| TTCGTCGTGGACGTACCTGA+AGG | 0.560275 | 8.1:-74136693 | MS.gene95282:CDS |
| GGTCTTCCATCAATAACCTC+CGG | 0.580094 | 8.1:+74136738 | None:intergenic |
| AAGTTCTTTAGCTGATGTCT+CGG | 0.584502 | 8.1:-74136616 | MS.gene95282:CDS |
| GAGGTTATTGATGGAAGACC+AGG | 0.585597 | 8.1:-74136735 | MS.gene95282:CDS |
| CGAAACTTGTTACTTTGTGG+AGG | 0.590781 | 8.1:-74136658 | MS.gene95282:CDS |
| GAACTATTCTTCCATAATCA+CGG | 0.599112 | 8.1:-74136766 | MS.gene95282:CDS |
| GATGTGTTTAACAAGAGCAG+AGG | 0.600623 | 8.1:+74138096 | None:intergenic |
| TCGTCGTGGACGTACCTGAA+GGG | 0.600827 | 8.1:-74136692 | MS.gene95282:CDS |
| TTCCATCAATAACCTCCGGA+TGG | 0.601457 | 8.1:+74136742 | None:intergenic |
| TAGCAGGTGTATTATGCAAG+GGG | 0.607837 | 8.1:-74137397 | MS.gene95282:CDS |
| GTTGGAACAACTTGATGATG+AGG | 0.610978 | 8.1:-74137304 | MS.gene95282:CDS |
| TGATGGAAGACCAGGTACAA+TGG | 0.630980 | 8.1:-74136727 | MS.gene95282:CDS |
| CATAATCACGGTCCATCCGG+AGG | 0.646677 | 8.1:-74136754 | MS.gene95282:CDS |
| AGGATCGGTTCGACCCTGCA+CGG | 0.651985 | 8.1:+74136584 | None:intergenic |
| GGTGATTGAATCATTCGTCG+TGG | 0.681706 | 8.1:-74136706 | MS.gene95282:CDS |
| CAGCTACAACAAGTACTGAG+AGG | 0.700141 | 8.1:-74137326 | MS.gene95282:CDS |
| CTTTAGCTGATGTCTCGGAG+AGG | 0.710726 | 8.1:-74136611 | MS.gene95282:CDS |
| TGGTGGTGATCATAGACTGA+GGG | 0.717983 | 8.1:-74137256 | MS.gene95282:intron |
| TTGGTGGTGATCATAGACTG+AGG | 0.778919 | 8.1:-74137257 | MS.gene95282:CDS |
| CGTACCTGAAGGGAACACGA+AGG | 0.780385 | 8.1:-74136682 | MS.gene95282:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAGAAAAATATTTTGAATT+TGG | + | chr8.1:74137553-74137572 | None:intergenic | 10.0% |
| !!! | TTTTTACTTATTAATAGAAA+TGG | - | chr8.1:74137858-74137877 | MS.gene95282:intron | 10.0% |
| !! | AAAATACCAAACTTAAAATT+TGG | + | chr8.1:74137724-74137743 | None:intergenic | 15.0% |
| !! | AATGAAGAAATTGTATAATA+TGG | - | chr8.1:74137610-74137629 | MS.gene95282:intron | 15.0% |
| !!! | AAATTTTAAGTTTGGTATTT+TGG | - | chr8.1:74137723-74137742 | MS.gene95282:intron | 15.0% |
| !! | AATATAAACCATTTATTAGC+AGG | - | chr8.1:74137343-74137362 | MS.gene95282:CDS | 20.0% |
| !!! | ATAAATGGTTTATATTTCTG+TGG | + | chr8.1:74137339-74137358 | None:intergenic | 20.0% |
| !!! | ATATTTTTTTTGTCTCTTTC+AGG | - | chr8.1:74137284-74137303 | MS.gene95282:CDS | 20.0% |
| !!! | CTTCTTTTAATTTTCTCTTT+TGG | + | chr8.1:74137244-74137263 | None:intergenic | 20.0% |
| !!! | GAAAATTAAAAGAAGTTGAT+TGG | - | chr8.1:74137249-74137268 | MS.gene95282:intron | 20.0% |
| !!! | TGAAATCATTTTTTGGAAAA+GGG | - | chr8.1:74136985-74137004 | MS.gene95282:intron | 20.0% |
| !!! | TTTTGAATTTGGAAAAACAA+AGG | + | chr8.1:74137542-74137561 | None:intergenic | 20.0% |
| ! | AACTATACATCTCAAAGAAA+TGG | + | chr8.1:74136881-74136900 | None:intergenic | 25.0% |
| ! | ACATCACAAACATGATTTAA+GGG | - | chr8.1:74136625-74136644 | MS.gene95282:CDS | 25.0% |
| ! | ATAATACACCTGCTAATAAA+TGG | + | chr8.1:74137354-74137373 | None:intergenic | 25.0% |
| ! | GAGAGATTATCTTATAATCT+TGG | - | chr8.1:74137801-74137820 | MS.gene95282:intron | 25.0% |
| ! | TCTTATGTTTATGTCTTCAT+AGG | - | chr8.1:74137909-74137928 | MS.gene95282:intron | 25.0% |
| ! | TGTCTCACAAACAATAAAAT+TGG | + | chr8.1:74137141-74137160 | None:intergenic | 25.0% |
| !! | ACATAGTCAGAAATTTTTCA+AGG | - | chr8.1:74137077-74137096 | MS.gene95282:intron | 25.0% |
| !! | TCTAGATTTGTGTTTTATGA+GGG | - | chr8.1:74136903-74136922 | MS.gene95282:intron | 25.0% |
| !! | TTCTAGATTTGTGTTTTATG+AGG | - | chr8.1:74136902-74136921 | MS.gene95282:intron | 25.0% |
| !!! | AAATTTTTCAAGGTTGGATT+TGG | - | chr8.1:74137087-74137106 | MS.gene95282:intron | 25.0% |
| !!! | ATGGTTGTGAAATCATTTTT+TGG | - | chr8.1:74136978-74136997 | MS.gene95282:intron | 25.0% |
| !!! | GTGAAATCATTTTTTGGAAA+AGG | - | chr8.1:74136984-74137003 | MS.gene95282:intron | 25.0% |
| !!! | TTTTTTGTGTCTGAATTACA+TGG | - | chr8.1:74136800-74136819 | MS.gene95282:intron | 25.0% |
| ACTATGATTAGAAATTCACG+CGG | - | chr8.1:74137660-74137679 | MS.gene95282:intron | 30.0% | |
| AGAGAAGTGAATGTTAAATC+TGG | - | chr8.1:74137402-74137421 | MS.gene95282:CDS | 30.0% | |
| ATAAAATCAATGGTCACCAA+TGG | - | chr8.1:74137762-74137781 | MS.gene95282:intron | 30.0% | |
| GAACTATTCTTCCATAATCA+CGG | - | chr8.1:74137990-74138009 | MS.gene95282:intron | 30.0% | |
| GACATCACAAACATGATTTA+AGG | - | chr8.1:74136624-74136643 | MS.gene95282:CDS | 30.0% | |
| TGGGTTAATATTGATAGGAT+CGG | + | chr8.1:74138190-74138209 | None:intergenic | 30.0% | |
| TTTCAAGATCTTGATTGTCT+TGG | - | chr8.1:74136854-74136873 | MS.gene95282:intron | 30.0% | |
| ! | AAAGTACTAACAAGATGAAC+TGG | + | chr8.1:74136692-74136711 | None:intergenic | 30.0% |
| ! | ATTTGTGTTTTATGAGGGTA+TGG | - | chr8.1:74136908-74136927 | MS.gene95282:intron | 30.0% |
| !!! | AGTCAGAAATTTTTCAAGGT+TGG | - | chr8.1:74137081-74137100 | MS.gene95282:intron | 30.0% |
| !!! | CATAAGATGCTAGTTTTGAT+TGG | - | chr8.1:74136952-74136971 | MS.gene95282:intron | 30.0% |
| !!! | TGCTAGTTTTGATTGGTTTA+TGG | - | chr8.1:74136959-74136978 | MS.gene95282:intron | 30.0% |
| !!! | TTTTTTGTCTCTTTCAGGTT+TGG | - | chr8.1:74137289-74137308 | MS.gene95282:CDS | 30.0% |
| AAGTTCTTTAGCTGATGTCT+CGG | - | chr8.1:74138140-74138159 | MS.gene95282:CDS | 35.0% | |
| AGACATCAGCTAAAGAACTT+AGG | + | chr8.1:74138140-74138159 | None:intergenic | 35.0% | |
| AGGAACATATTCTTGGTATC+AGG | - | chr8.1:74137472-74137491 | MS.gene95282:intron | 35.0% | |
| ATCGTTAAACCAAGATCAGA+CGG | - | chr8.1:74137697-74137716 | MS.gene95282:intron | 35.0% | |
| ATTAGCAGGTGTATTATGCA+AGG | - | chr8.1:74137357-74137376 | MS.gene95282:CDS | 35.0% | |
| ATTCTTGGTATCAGGATTGT+TGG | - | chr8.1:74137480-74137499 | MS.gene95282:intron | 35.0% | |
| CTCTTACACTTCCAATACTA+AGG | + | chr8.1:74137386-74137405 | None:intergenic | 35.0% | |
| GATGATGAGGAACATATTCT+TGG | - | chr8.1:74137465-74137484 | MS.gene95282:intron | 35.0% | |
| TTAGCAGGTGTATTATGCAA+GGG | - | chr8.1:74137358-74137377 | MS.gene95282:CDS | 35.0% | |
| TTTGTGTCTGAATTACATGG+TGG | - | chr8.1:74136803-74136822 | MS.gene95282:intron | 35.0% | |
| !!! | GACGGTCCAAATTTTAAGTT+TGG | - | chr8.1:74137715-74137734 | MS.gene95282:intron | 35.0% |
| AAATTTGGACCGTCTGATCT+TGG | + | chr8.1:74137709-74137728 | None:intergenic | 40.0% | |
| AGCATCAGTTGTAAGCTGAA+CGG | - | chr8.1:74137937-74137956 | MS.gene95282:intron | 40.0% | |
| CATTCACACATTCAGTCCAT+TGG | + | chr8.1:74137781-74137800 | None:intergenic | 40.0% | |
| GATGTGTTTAACAAGAGCAG+AGG | + | chr8.1:74136663-74136682 | None:intergenic | 40.0% | |
| GATTCAATCACCATTGTACC+TGG | + | chr8.1:74138042-74138061 | None:intergenic | 40.0% | |
| TAGCAGGTGTATTATGCAAG+GGG | - | chr8.1:74137359-74137378 | MS.gene95282:CDS | 40.0% | |
| !! | CAATGGACTGAATGTGTGAA+TGG | - | chr8.1:74137779-74137798 | MS.gene95282:intron | 40.0% |
| !! | CGAAACTTGTTACTTTGTGG+AGG | - | chr8.1:74138098-74138117 | MS.gene95282:CDS | 40.0% |
| !! | GGACGAAACTTGTTACTTTG+TGG | - | chr8.1:74138095-74138114 | MS.gene95282:CDS | 40.0% |
| !! | GTTGGAACAACTTGATGATG+AGG | - | chr8.1:74137452-74137471 | MS.gene95282:CDS | 40.0% |
| !! | TACAACAAGTACTGAGAGGT+TGG | - | chr8.1:74137434-74137453 | MS.gene95282:CDS | 40.0% |
| ATGCAAGGGGACCTTAGTAT+TGG | - | chr8.1:74137372-74137391 | MS.gene95282:CDS | 45.0% | |
| CTTGGTATCAGGATTGTTGG+TGG | - | chr8.1:74137483-74137502 | MS.gene95282:intron | 45.0% | |
| GAGGTTATTGATGGAAGACC+AGG | - | chr8.1:74138021-74138040 | MS.gene95282:intron | 45.0% | |
| GGTCTTCCATCAATAACCTC+CGG | + | chr8.1:74138021-74138040 | None:intergenic | 45.0% | |
| GGTGATTGAATCATTCGTCG+TGG | - | chr8.1:74138050-74138069 | MS.gene95282:intron | 45.0% | |
| TGATGGAAGACCAGGTACAA+TGG | - | chr8.1:74138029-74138048 | MS.gene95282:intron | 45.0% | |
| TTCCATAATCACGGTCCATC+CGG | - | chr8.1:74137999-74138018 | MS.gene95282:intron | 45.0% | |
| TTCCATCAATAACCTCCGGA+TGG | + | chr8.1:74138017-74138036 | None:intergenic | 45.0% | |
| ! | TGGTGGTGATCATAGACTGA+GGG | - | chr8.1:74137500-74137519 | MS.gene95282:intron | 45.0% |
| !! | ACTTTGTGGAGGCGTTGATT+AGG | - | chr8.1:74138109-74138128 | MS.gene95282:CDS | 45.0% |
| !! | CAGCTACAACAAGTACTGAG+AGG | - | chr8.1:74137430-74137449 | MS.gene95282:CDS | 45.0% |
| !! | CTCTCAGTACTTGTTGTAGC+TGG | + | chr8.1:74137432-74137451 | None:intergenic | 45.0% |
| !! | TTGGTGGTGATCATAGACTG+AGG | - | chr8.1:74137499-74137518 | MS.gene95282:intron | 45.0% |
| !! | AAAAAAAAAAATAAAATCAA+TGG | - | chr8.1:74137752-74137771 | MS.gene95282:intron | 5.0% |
| !! | TATTAATAAGTAAAAAAATA+TGG | + | chr8.1:74137854-74137873 | None:intergenic | 5.0% |
| AATTCACGCGGTCAGCACAT+CGG | - | chr8.1:74137672-74137691 | MS.gene95282:intron | 50.0% | |
| CTTTAGCTGATGTCTCGGAG+AGG | - | chr8.1:74138145-74138164 | MS.gene95282:CDS | 50.0% | |
| GTCCATCCGGAGGTTATTGA+TGG | - | chr8.1:74138012-74138031 | MS.gene95282:intron | 50.0% | |
| AGCTGATGTCTCGGAGAGGA+TGG | - | chr8.1:74138149-74138168 | MS.gene95282:CDS | 55.0% | |
| CATAATCACGGTCCATCCGG+AGG | - | chr8.1:74138002-74138021 | MS.gene95282:intron | 55.0% | |
| CGTACCTGAAGGGAACACGA+AGG | - | chr8.1:74138074-74138093 | MS.gene95282:intron | 55.0% | |
| CTCCGGATGGACCGTGATTA+TGG | + | chr8.1:74138004-74138023 | None:intergenic | 55.0% | |
| TCGTCCTTCGTGTTCCCTTC+AGG | + | chr8.1:74138081-74138100 | None:intergenic | 55.0% | |
| TCGTCGTGGACGTACCTGAA+GGG | - | chr8.1:74138064-74138083 | MS.gene95282:intron | 55.0% | |
| TTCGTCGTGGACGTACCTGA+AGG | - | chr8.1:74138063-74138082 | MS.gene95282:intron | 55.0% | |
| !! | AGGATCGGTTCGACCCTGCA+CGG | + | chr8.1:74138175-74138194 | None:intergenic | 60.0% |
| TCGGAGAGGATGGCCGTGCA+GGG | - | chr8.1:74138159-74138178 | MS.gene95282:CDS | 65.0% | |
| CTCGGAGAGGATGGCCGTGC+AGG | - | chr8.1:74138158-74138177 | MS.gene95282:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 74136566 | 74138212 | 74136566 | ID=MS.gene95282 |
| chr8.1 | mRNA | 74136566 | 74138212 | 74136566 | ID=MS.gene95282.t1;Parent=MS.gene95282 |
| chr8.1 | exon | 74138078 | 74138212 | 74138078 | ID=MS.gene95282.t1.exon1;Parent=MS.gene95282.t1 |
| chr8.1 | CDS | 74138078 | 74138212 | 74138078 | ID=cds.MS.gene95282.t1;Parent=MS.gene95282.t1 |
| chr8.1 | exon | 74137257 | 74137472 | 74137257 | ID=MS.gene95282.t1.exon2;Parent=MS.gene95282.t1 |
| chr8.1 | CDS | 74137257 | 74137472 | 74137257 | ID=cds.MS.gene95282.t1;Parent=MS.gene95282.t1 |
| chr8.1 | exon | 74136566 | 74136787 | 74136566 | ID=MS.gene95282.t1.exon3;Parent=MS.gene95282.t1 |
| chr8.1 | CDS | 74136566 | 74136787 | 74136566 | ID=cds.MS.gene95282.t1;Parent=MS.gene95282.t1 |
| Gene Sequence |
| Protein sequence |
