Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95295.t1 | RHN39760.1 | 97.9 | 575 | 12 | 0 | 1 | 575 | 1 | 575 | 0.00E+00 | 1131.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95295.t1 | A0A314KSQ4 | 69.0 | 575 | 177 | 1 | 1 | 574 | 5 | 579 | 1.1e-242 | 840.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95295.t1 | A0A396GF40 | 97.9 | 575 | 12 | 0 | 1 | 575 | 1 | 575 | 0.0e+00 | 1131.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene95295 | MS.gene073214 | PPI |
| MS.gene95295 | MS.gene78774 | PPI |
| MS.gene95295 | MS.gene045936 | PPI |
| MS.gene95295 | MS.gene95748 | PPI |
| MS.gene95295 | MS.gene046033 | PPI |
| MS.gene95295 | MS.gene99230 | PPI |
| MS.gene95295 | MS.gene36841 | PPI |
| MS.gene95295 | MS.gene34650 | PPI |
| MS.gene95295 | MS.gene25516 | PPI |
| MS.gene95295 | MS.gene053964 | PPI |
| MS.gene95295 | MS.gene064168 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95295.t1 | MTR_8g027920 | 97.391 | 575 | 15 | 0 | 1 | 575 | 1 | 575 | 0.0 | 1163 |
| MS.gene95295.t1 | MTR_8g027965 | 88.000 | 575 | 69 | 0 | 1 | 575 | 1 | 575 | 0.0 | 1056 |
| MS.gene95295.t1 | MTR_8g027955 | 87.130 | 575 | 74 | 0 | 1 | 575 | 8 | 582 | 0.0 | 1051 |
| MS.gene95295.t1 | MTR_8g027970 | 82.435 | 575 | 101 | 0 | 1 | 575 | 1 | 575 | 0.0 | 1013 |
| MS.gene95295.t1 | MTR_7g117110 | 73.921 | 579 | 147 | 1 | 1 | 575 | 1 | 579 | 0.0 | 918 |
| MS.gene95295.t1 | MTR_7g117110 | 71.084 | 415 | 112 | 2 | 1 | 411 | 1 | 411 | 0.0 | 626 |
| MS.gene95295.t1 | MTR_0102s0060 | 46.404 | 584 | 293 | 8 | 9 | 575 | 17 | 597 | 0.0 | 546 |
| MS.gene95295.t1 | MTR_5g016320 | 38.144 | 582 | 341 | 8 | 5 | 573 | 15 | 590 | 6.45e-143 | 426 |
| MS.gene95295.t1 | MTR_8g037720 | 61.994 | 321 | 96 | 2 | 259 | 575 | 137 | 435 | 1.65e-141 | 417 |
| MS.gene95295.t1 | MTR_8g037720 | 67.376 | 141 | 46 | 0 | 10 | 150 | 1 | 141 | 3.30e-56 | 195 |
| MS.gene95295.t1 | MTR_0035s0150 | 37.699 | 565 | 338 | 8 | 12 | 571 | 21 | 576 | 6.33e-134 | 403 |
| MS.gene95295.t1 | MTR_8g467000 | 35.000 | 580 | 353 | 6 | 11 | 571 | 15 | 589 | 1.19e-126 | 385 |
| MS.gene95295.t1 | MTR_4g045903 | 35.702 | 577 | 347 | 8 | 11 | 572 | 30 | 597 | 2.14e-126 | 384 |
| MS.gene95295.t1 | MTR_2g081860 | 35.334 | 583 | 350 | 6 | 11 | 571 | 14 | 591 | 2.47e-126 | 384 |
| MS.gene95295.t1 | MTR_1g047730 | 66.031 | 262 | 74 | 3 | 318 | 575 | 112 | 362 | 3.34e-121 | 362 |
| MS.gene95295.t1 | MTR_1g047730 | 44.304 | 158 | 43 | 3 | 10 | 166 | 1 | 114 | 1.01e-28 | 117 |
| MS.gene95295.t1 | MTR_1g088765 | 35.829 | 561 | 337 | 11 | 11 | 550 | 11 | 569 | 5.45e-115 | 354 |
| MS.gene95295.t1 | MTR_7g094190 | 32.696 | 575 | 352 | 14 | 11 | 561 | 5 | 568 | 4.91e-88 | 284 |
| MS.gene95295.t1 | MTR_1g088765 | 38.542 | 384 | 216 | 9 | 185 | 550 | 44 | 425 | 1.72e-84 | 271 |
| MS.gene95295.t1 | MTR_7g094190 | 31.799 | 478 | 294 | 13 | 105 | 561 | 2 | 468 | 1.80e-65 | 221 |
| MS.gene95295.t1 | MTR_7g094330 | 32.143 | 308 | 168 | 8 | 105 | 404 | 2 | 276 | 1.28e-37 | 140 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95295.t1 | AT2G46370 | 65.685 | 577 | 193 | 4 | 1 | 574 | 12 | 586 | 0.0 | 807 |
| MS.gene95295.t1 | AT2G46370 | 65.685 | 577 | 193 | 4 | 1 | 574 | 1 | 575 | 0.0 | 806 |
| MS.gene95295.t1 | AT2G46370 | 65.685 | 577 | 193 | 4 | 1 | 574 | 1 | 575 | 0.0 | 806 |
| MS.gene95295.t1 | AT2G46370 | 67.068 | 498 | 161 | 2 | 78 | 574 | 1 | 496 | 0.0 | 724 |
| MS.gene95295.t1 | AT4G03400 | 47.863 | 585 | 283 | 7 | 11 | 575 | 9 | 591 | 0.0 | 558 |
| MS.gene95295.t1 | AT4G03400 | 47.863 | 585 | 283 | 7 | 11 | 575 | 9 | 591 | 0.0 | 558 |
| MS.gene95295.t1 | AT2G23170 | 39.298 | 570 | 333 | 7 | 12 | 573 | 21 | 585 | 2.39e-143 | 427 |
| MS.gene95295.t1 | AT4G37390 | 38.435 | 575 | 334 | 9 | 12 | 571 | 22 | 591 | 2.92e-138 | 414 |
| MS.gene95295.t1 | AT2G14960 | 38.246 | 570 | 333 | 9 | 12 | 573 | 21 | 579 | 1.23e-136 | 410 |
| MS.gene95295.t1 | AT4G27260 | 37.143 | 595 | 344 | 7 | 2 | 571 | 7 | 596 | 4.41e-136 | 409 |
| MS.gene95295.t1 | AT1G23160 | 37.716 | 578 | 334 | 10 | 9 | 572 | 13 | 578 | 5.93e-136 | 408 |
| MS.gene95295.t1 | AT1G59500 | 39.474 | 570 | 329 | 9 | 12 | 571 | 22 | 585 | 6.72e-136 | 408 |
| MS.gene95295.t1 | AT5G13320 | 37.478 | 579 | 338 | 10 | 8 | 571 | 5 | 574 | 7.07e-133 | 400 |
| MS.gene95295.t1 | AT5G13320 | 37.478 | 579 | 338 | 10 | 8 | 571 | 5 | 574 | 7.07e-133 | 400 |
| MS.gene95295.t1 | AT5G13320 | 37.478 | 579 | 338 | 10 | 8 | 571 | 20 | 589 | 1.20e-132 | 400 |
| MS.gene95295.t1 | AT5G54510 | 36.475 | 573 | 340 | 6 | 18 | 571 | 29 | 596 | 2.39e-128 | 389 |
| MS.gene95295.t1 | AT1G48660 | 35.979 | 567 | 346 | 8 | 14 | 571 | 7 | 565 | 1.46e-127 | 386 |
| MS.gene95295.t1 | AT1G48660 | 35.965 | 570 | 345 | 9 | 14 | 571 | 7 | 568 | 3.55e-127 | 385 |
| MS.gene95295.t1 | AT5G51470 | 37.197 | 578 | 342 | 9 | 3 | 571 | 6 | 571 | 4.18e-126 | 382 |
| MS.gene95295.t1 | AT5G13360 | 37.457 | 582 | 334 | 12 | 9 | 571 | 9 | 579 | 3.13e-121 | 370 |
| MS.gene95295.t1 | AT5G13360 | 37.457 | 582 | 334 | 12 | 9 | 571 | 9 | 579 | 3.13e-121 | 370 |
| MS.gene95295.t1 | AT5G13360 | 37.457 | 582 | 334 | 12 | 9 | 571 | 87 | 657 | 1.89e-120 | 371 |
| MS.gene95295.t1 | AT5G13370 | 36.116 | 587 | 349 | 12 | 4 | 571 | 1 | 580 | 6.19e-120 | 367 |
| MS.gene95295.t1 | AT5G13350 | 35.364 | 591 | 348 | 15 | 4 | 571 | 1 | 580 | 1.76e-119 | 365 |
| MS.gene95295.t1 | AT5G13350 | 35.364 | 591 | 348 | 15 | 4 | 571 | 1 | 580 | 1.76e-119 | 365 |
| MS.gene95295.t1 | AT2G47750 | 36.034 | 580 | 353 | 10 | 5 | 571 | 3 | 577 | 2.56e-117 | 360 |
| MS.gene95295.t1 | AT5G13380 | 35.602 | 573 | 341 | 13 | 17 | 571 | 47 | 609 | 3.40e-113 | 350 |
| MS.gene95295.t1 | AT1G28130 | 33.723 | 599 | 350 | 12 | 9 | 571 | 9 | 596 | 6.18e-111 | 344 |
| MS.gene95295.t1 | AT5G51470 | 36.853 | 483 | 289 | 6 | 98 | 571 | 6 | 481 | 8.19e-102 | 317 |
| MS.gene95295.t1 | AT1G48670 | 32.155 | 566 | 316 | 11 | 16 | 571 | 10 | 517 | 2.11e-98 | 309 |
| MS.gene95295.t1 | AT1G48670 | 35.539 | 408 | 249 | 6 | 172 | 571 | 5 | 406 | 1.74e-89 | 282 |
| MS.gene95295.t1 | AT1G28130 | 36.190 | 420 | 225 | 9 | 185 | 571 | 44 | 453 | 8.32e-85 | 272 |
| MS.gene95295.t1 | AT1G48690 | 34.197 | 193 | 112 | 4 | 14 | 200 | 7 | 190 | 3.87e-23 | 97.4 |
Find 115 sgRNAs with CRISPR-Local
Find 208 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATCACTGCTATCTCTTTA+AGG | 0.140515 | 8.1:+73954119 | MS.gene95295:CDS |
| AGCTTAAGGCCTTGCCATTT+TGG | 0.173440 | 8.1:-73954843 | None:intergenic |
| ACACATGCCTTGAAGCTTTC+AGG | 0.188228 | 8.1:-73954013 | None:intergenic |
| CCGGACACTATGTTATCTTT+TGG | 0.225301 | 8.1:+73956717 | MS.gene95295:CDS |
| CCTTTGTTGACTTCTGAGTA+TGG | 0.254938 | 8.1:+73955396 | MS.gene95295:CDS |
| TCAGAACCTTTGAACAAGTT+TGG | 0.258443 | 8.1:+73955118 | MS.gene95295:CDS |
| ATTGGTTATTTACAAAGATT+TGG | 0.271404 | 8.1:+73954039 | MS.gene95295:CDS |
| CTTGAACATTATGTTGGTTT+AGG | 0.272496 | 8.1:+73956896 | MS.gene95295:CDS |
| TAGAGTGATTGGTGAAAATT+AGG | 0.278144 | 8.1:-73955012 | None:intergenic |
| CATAATGTTCAAGAATCTTC+TGG | 0.290500 | 8.1:-73956886 | None:intergenic |
| GCAAACTCAGGAGCCACTTT+AGG | 0.305629 | 8.1:-73955453 | None:intergenic |
| AGGGGATGTGGTAAGGGTTA+TGG | 0.307891 | 8.1:+73956511 | MS.gene95295:CDS |
| GACATAGCAGTTCTAATTGA+TGG | 0.313378 | 8.1:-73955195 | None:intergenic |
| CAGAACCTTTGAACAAGTTT+GGG | 0.324841 | 8.1:+73955119 | MS.gene95295:CDS |
| GAGAGGCTAACAAAGGATAC+TGG | 0.330786 | 8.1:+73953899 | MS.gene95295:CDS |
| CCTTGAACATACTTAACATT+AGG | 0.332140 | 8.1:-73955312 | None:intergenic |
| ATTCCTTTGTCACAACTTGA+TGG | 0.334642 | 8.1:+73955516 | MS.gene95295:CDS |
| GGGGATGTGGTAAGGGTTAT+GGG | 0.337169 | 8.1:+73956512 | MS.gene95295:CDS |
| TGGATCAAGTTAGCTAGTTC+AGG | 0.340099 | 8.1:-73955237 | None:intergenic |
| TCAACTATTCTATTGATATA+AGG | 0.342032 | 8.1:-73954064 | None:intergenic |
| GTTGTTAGCTGAAGAGAAAA+TGG | 0.368303 | 8.1:+73956652 | MS.gene95295:CDS |
| TTCATTGCATGCTTGTATCC+TGG | 0.373701 | 8.1:-73954943 | None:intergenic |
| AAGTTAGCTAGTTCAGGATT+TGG | 0.373912 | 8.1:-73955231 | None:intergenic |
| GCTGAATACTTGCAGAGTTT+AGG | 0.375997 | 8.1:+73953971 | MS.gene95295:CDS |
| CAAAGTGTTGCAAATATTGT+TGG | 0.386965 | 8.1:+73956970 | MS.gene95295:CDS |
| AACTGATCCTGAAAGCTTCA+AGG | 0.401122 | 8.1:+73954006 | MS.gene95295:CDS |
| AGAGAGTTTCCTATCCAAAA+TGG | 0.404103 | 8.1:+73954829 | MS.gene95295:intron |
| AATGCATGGGATTGAGCAAT+TGG | 0.406780 | 8.1:+73955265 | MS.gene95295:CDS |
| CCTAATGTTAAGTATGTTCA+AGG | 0.408097 | 8.1:+73955312 | MS.gene95295:CDS |
| GTGCAGGCTTATACAGATAT+AGG | 0.409763 | 8.1:+73956486 | MS.gene95295:intron |
| AGTATGGTTCTTCTGAAGGT+TGG | 0.412179 | 8.1:+73955412 | MS.gene95295:CDS |
| CTTAAAGAGATAGCAGTGAT+TGG | 0.415630 | 8.1:-73954118 | None:intergenic |
| TGGTGAATGTTGTACATGTT+TGG | 0.416776 | 8.1:+73956772 | MS.gene95295:CDS |
| CCAAAAGATAACATAGTGTC+CGG | 0.423072 | 8.1:-73956717 | None:intergenic |
| TCCGAACAAGTCGGAGTTCA+AGG | 0.425031 | 8.1:-73956853 | None:intergenic |
| GCAAGCTATCACAAGCTAAA+GGG | 0.431829 | 8.1:+73954878 | MS.gene95295:CDS |
| CCTGTTCCTAAAGGCAAAAG+AGG | 0.441171 | 8.1:-73954313 | None:intergenic |
| CAACAATATTTGCAACACTT+TGG | 0.447856 | 8.1:-73956969 | None:intergenic |
| TGAGAAATTTGACATGGAAA+AGG | 0.452560 | 8.1:+73953862 | MS.gene95295:CDS |
| GTCACAACTTGATGGAACTA+AGG | 0.454259 | 8.1:+73955524 | MS.gene95295:CDS |
| TCTGAGTATGGTTCTTCTGA+AGG | 0.455124 | 8.1:+73955408 | MS.gene95295:CDS |
| TATATCAATAGAATAGTTGA+TGG | 0.455629 | 8.1:+73954067 | MS.gene95295:CDS |
| ATGAAAGCACTTCAATCTCC+TGG | 0.455873 | 8.1:+73954961 | MS.gene95295:CDS |
| TGCAACACTTTGGTGTTTGT+AGG | 0.456160 | 8.1:-73956959 | None:intergenic |
| CAATGTTGATAGTAAGCATA+AGG | 0.460464 | 8.1:-73956580 | None:intergenic |
| AATTCAAAGTAAGCAATTTG+AGG | 0.463474 | 8.1:-73955492 | None:intergenic |
| TTGCAGAGTTTAGGACTGAA+TGG | 0.463590 | 8.1:+73953980 | MS.gene95295:CDS |
| CAGATATAGGCTAGGGGATG+TGG | 0.467515 | 8.1:+73956499 | MS.gene95295:CDS |
| ATAGGCTAGGGGATGTGGTA+AGG | 0.468129 | 8.1:+73956504 | MS.gene95295:CDS |
| CTTCAAGGCATGTGTTCCAT+TGG | 0.474968 | 8.1:+73954021 | MS.gene95295:CDS |
| CCCTTGAACTCCGACTTGTT+CGG | 0.477568 | 8.1:+73956852 | MS.gene95295:CDS |
| GATGTTTCTCCTATTCTCAC+TGG | 0.483684 | 8.1:+73954091 | MS.gene95295:CDS |
| AGCAAGCTATCACAAGCTAA+AGG | 0.491667 | 8.1:+73954877 | MS.gene95295:CDS |
| TTTACAATTATCAGTGGAAA+CGG | 0.492726 | 8.1:+73956622 | MS.gene95295:CDS |
| GCCAATGTATTCAGAAATCC+AGG | 0.494020 | 8.1:+73954925 | MS.gene95295:CDS |
| AGAGGTGGCAGTAGAGTGAT+TGG | 0.496209 | 8.1:-73955023 | None:intergenic |
| GGATACTGGGAATGTTCAAA+AGG | 0.497742 | 8.1:+73953913 | MS.gene95295:CDS |
| AAGATTCTTGAACATTATGT+TGG | 0.498920 | 8.1:+73956890 | MS.gene95295:CDS |
| TGCAGTTCTGGTACTAGTCA+AGG | 0.501368 | 8.1:+73954228 | MS.gene95295:intron |
| CTCTACTGCCACCTCTTATG+TGG | 0.505432 | 8.1:+73955030 | MS.gene95295:CDS |
| TAGGCTAGGGGATGTGGTAA+GGG | 0.506564 | 8.1:+73956505 | MS.gene95295:CDS |
| TGCAAAGCAGTCCACATAAG+AGG | 0.509416 | 8.1:-73955041 | None:intergenic |
| TTCTTCCCAAACTTGTTCAA+AGG | 0.512345 | 8.1:-73955124 | None:intergenic |
| TCAATCCCATGCATTTCTTG+TGG | 0.514055 | 8.1:-73955257 | None:intergenic |
| TCAAACAATTCATCATTCCA+TGG | 0.514252 | 8.1:-73954267 | None:intergenic |
| GAAGATTGGTGAAGATTATG+AGG | 0.519278 | 8.1:+73955578 | MS.gene95295:CDS |
| ACATCATGAGGGCTGCATCC+AGG | 0.523792 | 8.1:-73954979 | None:intergenic |
| ATACTAATACCTGTTCCTAA+AGG | 0.526965 | 8.1:-73954322 | None:intergenic |
| TTCAAATGTAAATCCTAAAG+TGG | 0.533775 | 8.1:+73955440 | MS.gene95295:CDS |
| GCTGCTGTAGATGAAGCTTA+AGG | 0.534011 | 8.1:-73954857 | None:intergenic |
| CTTATTACTGACATCAAAGA+AGG | 0.535229 | 8.1:+73955147 | MS.gene95295:CDS |
| ATTTCTGAATACATTGGCTG+TGG | 0.541655 | 8.1:-73954920 | None:intergenic |
| AGGGATCATGACTGGTGCAA+TGG | 0.543132 | 8.1:+73955332 | MS.gene95295:CDS |
| CTTGATCCACAAGAAATGCA+TGG | 0.545678 | 8.1:+73955251 | MS.gene95295:CDS |
| GCTTATACAGATATAGGCTA+GGG | 0.552915 | 8.1:+73956492 | MS.gene95295:CDS |
| CCGAACAAGTCGGAGTTCAA+GGG | 0.559483 | 8.1:-73956852 | None:intergenic |
| AAGGTAGAGCTTGAGCCAGT+GGG | 0.565600 | 8.1:+73955543 | MS.gene95295:CDS |
| TATGTTCAAGGGATCATGAC+TGG | 0.568493 | 8.1:+73955324 | MS.gene95295:CDS |
| AAATCTTTGTAAATAACCAA+TGG | 0.570068 | 8.1:-73954037 | None:intergenic |
| TTCACATCAGTTAACCCCAC+TGG | 0.574263 | 8.1:-73955558 | None:intergenic |
| GTTCCATCAAGTTGTGACAA+AGG | 0.575864 | 8.1:-73955519 | None:intergenic |
| GGCTTATACAGATATAGGCT+AGG | 0.576800 | 8.1:+73956491 | MS.gene95295:intron |
| CAAGCTATCACAAGCTAAAG+GGG | 0.578514 | 8.1:+73954879 | MS.gene95295:CDS |
| TCCTGGATTTCTGAATACAT+TGG | 0.580005 | 8.1:-73954926 | None:intergenic |
| TAAGGTAGAGCTTGAGCCAG+TGG | 0.580352 | 8.1:+73955542 | MS.gene95295:CDS |
| TTTCTCTTCAGCTAACAACA+TGG | 0.580961 | 8.1:-73956648 | None:intergenic |
| TTGATCCACAAGAAATGCAT+GGG | 0.585285 | 8.1:+73955252 | MS.gene95295:CDS |
| CTAATGTTAAGTATGTTCAA+GGG | 0.588492 | 8.1:+73955313 | MS.gene95295:CDS |
| AGAGGCTAACAAAGGATACT+GGG | 0.592286 | 8.1:+73953900 | MS.gene95295:CDS |
| AGGTGATAGAAGAATTTGAG+AGG | 0.593776 | 8.1:+73953882 | MS.gene95295:CDS |
| GGGTTAACTGATGTGAAGAT+TGG | 0.597121 | 8.1:+73955564 | MS.gene95295:CDS |
| GAATGATTTACAATTATCAG+TGG | 0.599036 | 8.1:+73956616 | MS.gene95295:CDS |
| ACAACATAAGTAGCAAACTC+AGG | 0.609304 | 8.1:-73955465 | None:intergenic |
| GGACTGAATATCACATCATG+AGG | 0.611298 | 8.1:-73954991 | None:intergenic |
| GTTAGTTCTAGAAAAGTCAA+AGG | 0.611504 | 8.1:+73956821 | MS.gene95295:CDS |
| CAAAAGATAACATAGTGTCC+GGG | 0.615461 | 8.1:-73956716 | None:intergenic |
| AATAATTGAGAAATTTGACA+TGG | 0.619152 | 8.1:+73953856 | MS.gene95295:CDS |
| TAGAAAAGTCAAAGGTATTG+CGG | 0.623191 | 8.1:+73956829 | MS.gene95295:CDS |
| GAACTCCGACTTGTTCGGAA+AGG | 0.630222 | 8.1:+73956857 | MS.gene95295:CDS |
| AGAATTTGAGAGGCTAACAA+AGG | 0.640125 | 8.1:+73953892 | MS.gene95295:CDS |
| ATGTTCCTTTCCGAACAAGT+CGG | 0.642426 | 8.1:-73956862 | None:intergenic |
| GTTTCCTATCCAAAATGGCA+AGG | 0.646453 | 8.1:+73954834 | MS.gene95295:CDS |
| GTTGAGACACTATGCAGGAG+AGG | 0.647395 | 8.1:+73955371 | MS.gene95295:CDS |
| TGAGTCAGTTCAAGACACCT+AGG | 0.648473 | 8.1:+73956927 | MS.gene95295:CDS |
| TTTGTAGGAGCAACACACCT+AGG | 0.657654 | 8.1:-73956944 | None:intergenic |
| ATGGGATTGAGCAATTGGTA+TGG | 0.660599 | 8.1:+73955270 | MS.gene95295:CDS |
| GAAGCAAGTGATGAAGTGCT+TGG | 0.664960 | 8.1:+73956752 | MS.gene95295:CDS |
| CCATACTCAGAAGTCAACAA+AGG | 0.673745 | 8.1:-73955396 | None:intergenic |
| AAAGCAGTCCACATAAGAGG+TGG | 0.677682 | 8.1:-73955038 | None:intergenic |
| GACTGAATATCACATCATGA+GGG | 0.679391 | 8.1:-73954990 | None:intergenic |
| CTTATACAGATATAGGCTAG+GGG | 0.689485 | 8.1:+73956493 | MS.gene95295:CDS |
| ATTGATTTATCTAAAGAACC+CGG | 0.689692 | 8.1:+73956698 | MS.gene95295:CDS |
| AGGTAGAGCTTGAGCCAGTG+GGG | 0.703294 | 8.1:+73955544 | MS.gene95295:CDS |
| AAGCTATCACAAGCTAAAGG+GGG | 0.713902 | 8.1:+73954880 | MS.gene95295:CDS |
| GGTTTGATATATCTGCACTG+TGG | 0.735598 | 8.1:-73954292 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAACTAATTTATAAAATGAT+AGG | - | chr8.1:73955797-73955816 | None:intergenic | 10.0% |
| !!! | TTACTTTTTAAAAATATCAT+CGG | + | chr8.1:73954627-73954646 | MS.gene95295:intron | 10.0% |
| !!! | TTTATTTTCTAAATCATTAT+CGG | + | chr8.1:73954413-73954432 | MS.gene95295:intron | 10.0% |
| !!! | ACTTTTCATTTTTATTGTAT+GGG | + | chr8.1:73956244-73956263 | MS.gene95295:intron | 15.0% |
| !!! | TACTTTTCATTTTTATTGTA+TGG | + | chr8.1:73956243-73956262 | MS.gene95295:intron | 15.0% |
| !! | AAATCTTTGTAAATAACCAA+TGG | - | chr8.1:73954040-73954059 | None:intergenic | 20.0% |
| !! | AATAATTGAGAAATTTGACA+TGG | + | chr8.1:73953856-73953875 | MS.gene95295:CDS | 20.0% |
| !! | ATTGGTTATTTACAAAGATT+TGG | + | chr8.1:73954039-73954058 | MS.gene95295:CDS | 20.0% |
| !! | CTTAAGAAGAGAAAAAAAAA+AGG | - | chr8.1:73955647-73955666 | None:intergenic | 20.0% |
| !! | TATAAATTAGTTAATGTGTC+AGG | + | chr8.1:73955804-73955823 | MS.gene95295:intron | 20.0% |
| !! | TATATCAATAGAATAGTTGA+TGG | + | chr8.1:73954067-73954086 | MS.gene95295:CDS | 20.0% |
| !! | TCAACTATTCTATTGATATA+AGG | - | chr8.1:73954067-73954086 | None:intergenic | 20.0% |
| !!! | CTCTAAAGTATAAAAAAAAC+CGG | - | chr8.1:73955770-73955789 | None:intergenic | 20.0% |
| !!! | TATTAGTCCCTAAATATTTT+AGG | - | chr8.1:73955744-73955763 | None:intergenic | 20.0% |
| !!! | TCACTAGGATTTTTTTTAAA+AGG | - | chr8.1:73956402-73956421 | None:intergenic | 20.0% |
| !!! | TTATGTTTTGTTTTTGTCTA+GGG | + | chr8.1:73955914-73955933 | MS.gene95295:intron | 20.0% |
| !!! | TTTATGTTTTGTTTTTGTCT+AGG | + | chr8.1:73955913-73955932 | MS.gene95295:intron | 20.0% |
| ! | AAACTTTCAATATCAAGTGT+CGG | + | chr8.1:73954749-73954768 | MS.gene95295:intron | 25.0% |
| ! | AAGATTCTTGAACATTATGT+TGG | + | chr8.1:73956890-73956909 | MS.gene95295:CDS | 25.0% |
| ! | AATTATGGAGGAATTGATTA+GGG | + | chr8.1:73956141-73956160 | MS.gene95295:intron | 25.0% |
| ! | AATTCAAAGTAAGCAATTTG+AGG | - | chr8.1:73955495-73955514 | None:intergenic | 25.0% |
| ! | AGAGACTACCTAAAATATTT+AGG | + | chr8.1:73955733-73955752 | MS.gene95295:intron | 25.0% |
| ! | CTAATGTTAAGTATGTTCAA+GGG | + | chr8.1:73955313-73955332 | MS.gene95295:CDS | 25.0% |
| ! | CTTCTTTAAATTCTAACTAG+CGG | - | chr8.1:73954789-73954808 | None:intergenic | 25.0% |
| ! | GAAAGCAAAAATATATACCA+TGG | + | chr8.1:73954250-73954269 | MS.gene95295:CDS | 25.0% |
| ! | GAATGATTTACAATTATCAG+TGG | + | chr8.1:73956616-73956635 | MS.gene95295:CDS | 25.0% |
| ! | GAGACTACCTAAAATATTTA+GGG | + | chr8.1:73955734-73955753 | MS.gene95295:intron | 25.0% |
| ! | GGATACAAATTACCTAAATT+TGG | - | chr8.1:73956335-73956354 | None:intergenic | 25.0% |
| ! | GGTACATATTTAATGTGATT+AGG | - | chr8.1:73956381-73956400 | None:intergenic | 25.0% |
| ! | TACATAACAAATGTTACACA+AGG | + | chr8.1:73956202-73956221 | MS.gene95295:intron | 25.0% |
| ! | TAGACTCTTAGACTTAATAA+AGG | - | chr8.1:73956435-73956454 | None:intergenic | 25.0% |
| ! | TTCAAATGTAAATCCTAAAG+TGG | + | chr8.1:73955440-73955459 | MS.gene95295:CDS | 25.0% |
| ! | TTTACAATTATCAGTGGAAA+CGG | + | chr8.1:73956622-73956641 | MS.gene95295:CDS | 25.0% |
| ! | TTTCTCTTCTTAAGATGTTA+GGG | + | chr8.1:73955653-73955672 | MS.gene95295:intron | 25.0% |
| !! | ATATACTAGTAGTGTGTTTT+TGG | + | chr8.1:73956041-73956060 | MS.gene95295:intron | 25.0% |
| !! | ATTGATTTATCTAAAGAACC+CGG | + | chr8.1:73956698-73956717 | MS.gene95295:CDS | 25.0% |
| !! | CTTGATATTGAAAGTTTGTT+TGG | - | chr8.1:73954746-73954765 | None:intergenic | 25.0% |
| !! | GTGAAAAAGTTAGAAGTTTT+TGG | + | chr8.1:73954184-73954203 | MS.gene95295:intron | 25.0% |
| !! | TTTTCTCTTCTTAAGATGTT+AGG | + | chr8.1:73955652-73955671 | MS.gene95295:intron | 25.0% |
| !!! | ATAAATATTTTAGTACCTGC+AGG | - | chr8.1:73955618-73955637 | None:intergenic | 25.0% |
| !!! | TAACTTTTTCACATTCAACT+GGG | - | chr8.1:73954176-73954195 | None:intergenic | 25.0% |
| !!! | TCATTTTTATTGTATGGGAT+GGG | + | chr8.1:73956249-73956268 | MS.gene95295:intron | 25.0% |
| !!! | TTCATTTTTATTGTATGGGA+TGG | + | chr8.1:73956248-73956267 | MS.gene95295:intron | 25.0% |
| AAAGGTGAGAAAATTTCACT+AGG | - | chr8.1:73956417-73956436 | None:intergenic | 30.0% | |
| AAGAATATAATCAACTGTGC+TGG | - | chr8.1:73955893-73955912 | None:intergenic | 30.0% | |
| ATACTAATACCTGTTCCTAA+AGG | - | chr8.1:73954325-73954344 | None:intergenic | 30.0% | |
| ATGTACTATGTTCCTTATGT+AGG | - | chr8.1:73956357-73956376 | None:intergenic | 30.0% | |
| ATGTTAGGGACTAATATGAT+GGG | + | chr8.1:73955667-73955686 | MS.gene95295:intron | 30.0% | |
| ATTAATCTTGGATAATGTGC+AGG | + | chr8.1:73956470-73956489 | MS.gene95295:intron | 30.0% | |
| CAAAAATCAAGTTTCTTCGT+AGG | + | chr8.1:73956552-73956571 | MS.gene95295:CDS | 30.0% | |
| CAACAATATTTGCAACACTT+TGG | - | chr8.1:73956972-73956991 | None:intergenic | 30.0% | |
| CAATTATGGAGGAATTGATT+AGG | + | chr8.1:73956140-73956159 | MS.gene95295:intron | 30.0% | |
| CATAATGTTCAAGAATCTTC+TGG | - | chr8.1:73956889-73956908 | None:intergenic | 30.0% | |
| CCTAATGTTAAGTATGTTCA+AGG | + | chr8.1:73955312-73955331 | MS.gene95295:CDS | 30.0% | |
| CCTTGAACATACTTAACATT+AGG | - | chr8.1:73955315-73955334 | None:intergenic | 30.0% | |
| CTACTTTGTTCTGTTACAAT+GGG | + | chr8.1:73955856-73955875 | MS.gene95295:intron | 30.0% | |
| CTTATTACTGACATCAAAGA+AGG | + | chr8.1:73955147-73955166 | MS.gene95295:CDS | 30.0% | |
| GTCTAAGAGTCTAATTATGT+TGG | + | chr8.1:73956442-73956461 | MS.gene95295:intron | 30.0% | |
| TAGAGTGATTGGTGAAAATT+AGG | - | chr8.1:73955015-73955034 | None:intergenic | 30.0% | |
| TATTTAGGGACTAATATGAC+CGG | + | chr8.1:73955748-73955767 | MS.gene95295:intron | 30.0% | |
| TCAAACAATTCATCATTCCA+TGG | - | chr8.1:73954270-73954289 | None:intergenic | 30.0% | |
| TGAGAAATTTGACATGGAAA+AGG | + | chr8.1:73953862-73953881 | MS.gene95295:CDS | 30.0% | |
| TGTACTATGTTCCTTATGTA+GGG | - | chr8.1:73956356-73956375 | None:intergenic | 30.0% | |
| TTAACATTAGGAAAAAGCTC+TGG | - | chr8.1:73955303-73955322 | None:intergenic | 30.0% | |
| ! | AAATTTTGTGTTTGCAGTTC+TGG | + | chr8.1:73954216-73954235 | MS.gene95295:intron | 30.0% |
| ! | AGAGTGGTTATTGTGAATTT+TGG | + | chr8.1:73955945-73955964 | MS.gene95295:intron | 30.0% |
| ! | CTACGAAGAAACTTGATTTT+TGG | - | chr8.1:73956554-73956573 | None:intergenic | 30.0% |
| ! | GATAAAGCTTTTAGCACAAA+TGG | + | chr8.1:73956176-73956195 | MS.gene95295:intron | 30.0% |
| ! | GGAAACACTGAAAAAGATTT+TGG | + | chr8.1:73953934-73953953 | MS.gene95295:CDS | 30.0% |
| ! | GTAATTTGTATCCCTACATA+AGG | + | chr8.1:73956342-73956361 | MS.gene95295:intron | 30.0% |
| !! | ATGTTGGTGACAATTAATCT+TGG | + | chr8.1:73956458-73956477 | MS.gene95295:intron | 30.0% |
| !! | CAAAGTGTTGCAAATATTGT+TGG | + | chr8.1:73956970-73956989 | MS.gene95295:CDS | 30.0% |
| !! | CAATGTTGATAGTAAGCATA+AGG | - | chr8.1:73956583-73956602 | None:intergenic | 30.0% |
| !! | CTTGAACATTATGTTGGTTT+AGG | + | chr8.1:73956896-73956915 | MS.gene95295:CDS | 30.0% |
| !! | GTTAGTTCTAGAAAAGTCAA+AGG | + | chr8.1:73956821-73956840 | MS.gene95295:CDS | 30.0% |
| !! | TAGAAAAGTCAAAGGTATTG+CGG | + | chr8.1:73956829-73956848 | MS.gene95295:CDS | 30.0% |
| !!! | ATGATGGGTTTTCATACTTT+AGG | + | chr8.1:73955682-73955701 | MS.gene95295:intron | 30.0% |
| !!! | CTAACTTTTTCACATTCAAC+TGG | - | chr8.1:73954177-73954196 | None:intergenic | 30.0% |
| !!! | GTGTTTTTGGAAAGATTGAA+TGG | + | chr8.1:73956054-73956073 | MS.gene95295:intron | 30.0% |
| !!! | TGATTTTTGGAGTTGAGTTA+TGG | - | chr8.1:73956541-73956560 | None:intergenic | 30.0% |
| !!! | TGTCTCAACTTTTTCACATA+AGG | - | chr8.1:73955360-73955379 | None:intergenic | 30.0% |
| AAAAAGTTGAGACACTATGC+AGG | + | chr8.1:73955366-73955385 | MS.gene95295:CDS | 35.0% | |
| AAGTTAGCTAGTTCAGGATT+TGG | - | chr8.1:73955234-73955253 | None:intergenic | 35.0% | |
| ACAACATAAGTAGCAAACTC+AGG | - | chr8.1:73955468-73955487 | None:intergenic | 35.0% | |
| ACCTAAATTTGGTCCCATAA+AGG | - | chr8.1:73956324-73956343 | None:intergenic | 35.0% | |
| ACCTTTATGGGACCAAATTT+AGG | + | chr8.1:73956320-73956339 | MS.gene95295:intron | 35.0% | |
| AGAATTTGAGAGGCTAACAA+AGG | + | chr8.1:73953892-73953911 | MS.gene95295:CDS | 35.0% | |
| AGAGAGTTTCCTATCCAAAA+TGG | + | chr8.1:73954829-73954848 | MS.gene95295:intron | 35.0% | |
| AGGTGATAGAAGAATTTGAG+AGG | + | chr8.1:73953882-73953901 | MS.gene95295:CDS | 35.0% | |
| ATAGGAAACTCTCTGCATAA+TGG | - | chr8.1:73954823-73954842 | None:intergenic | 35.0% | |
| ATTCCTTTGTCACAACTTGA+TGG | + | chr8.1:73955516-73955535 | MS.gene95295:CDS | 35.0% | |
| CAAAAGATAACATAGTGTCC+GGG | - | chr8.1:73956719-73956738 | None:intergenic | 35.0% | |
| CAATCACTGCTATCTCTTTA+AGG | + | chr8.1:73954119-73954138 | MS.gene95295:CDS | 35.0% | |
| CAGAACCTTTGAACAAGTTT+GGG | + | chr8.1:73955119-73955138 | MS.gene95295:CDS | 35.0% | |
| CCAAAAGATAACATAGTGTC+CGG | - | chr8.1:73956720-73956739 | None:intergenic | 35.0% | |
| CTTAAAGAGATAGCAGTGAT+TGG | - | chr8.1:73954121-73954140 | None:intergenic | 35.0% | |
| CTTATACAGATATAGGCTAG+GGG | + | chr8.1:73956493-73956512 | MS.gene95295:CDS | 35.0% | |
| GAAGATTGGTGAAGATTATG+AGG | + | chr8.1:73955578-73955597 | MS.gene95295:CDS | 35.0% | |
| GACTGAATATCACATCATGA+GGG | - | chr8.1:73954993-73955012 | None:intergenic | 35.0% | |
| GATGTTAGGGACTAATATGA+TGG | + | chr8.1:73955666-73955685 | MS.gene95295:intron | 35.0% | |
| GCTTATACAGATATAGGCTA+GGG | + | chr8.1:73956492-73956511 | MS.gene95295:CDS | 35.0% | |
| GTTGTTAGCTGAAGAGAAAA+TGG | + | chr8.1:73956652-73956671 | MS.gene95295:CDS | 35.0% | |
| TCAGAACCTTTGAACAAGTT+TGG | + | chr8.1:73955118-73955137 | MS.gene95295:CDS | 35.0% | |
| TCCTGGATTTCTGAATACAT+TGG | - | chr8.1:73954929-73954948 | None:intergenic | 35.0% | |
| TGGAAAGATTGAATGGTTAC+TGG | + | chr8.1:73956061-73956080 | MS.gene95295:intron | 35.0% | |
| TGGTGAATGTTGTACATGTT+TGG | + | chr8.1:73956772-73956791 | MS.gene95295:CDS | 35.0% | |
| TTATTGTATGGGATGGGATT+GGG | + | chr8.1:73956255-73956274 | MS.gene95295:intron | 35.0% | |
| TTGAACATAACCACATGTGT+CGG | + | chr8.1:73954536-73954555 | MS.gene95295:intron | 35.0% | |
| TTGATCCACAAGAAATGCAT+GGG | + | chr8.1:73955252-73955271 | MS.gene95295:CDS | 35.0% | |
| TTTATTGTATGGGATGGGAT+TGG | + | chr8.1:73956254-73956273 | MS.gene95295:intron | 35.0% | |
| TTTCTCTTCAGCTAACAACA+TGG | - | chr8.1:73956651-73956670 | None:intergenic | 35.0% | |
| ! | ATCAAACCTCTTTTGCCTTT+AGG | + | chr8.1:73954307-73954326 | MS.gene95295:CDS | 35.0% |
| ! | ATTTCTGAATACATTGGCTG+TGG | - | chr8.1:73954923-73954942 | None:intergenic | 35.0% |
| ! | CGGACACTATGTTATCTTTT+GGG | + | chr8.1:73956718-73956737 | MS.gene95295:CDS | 35.0% |
| ! | GACATAGCAGTTCTAATTGA+TGG | - | chr8.1:73955198-73955217 | None:intergenic | 35.0% |
| ! | GCTACTTTGTTCTGTTACAA+TGG | + | chr8.1:73955855-73955874 | MS.gene95295:intron | 35.0% |
| ! | TTCTTCCCAAACTTGTTCAA+AGG | - | chr8.1:73955127-73955146 | None:intergenic | 35.0% |
| !! | GTTACTTTGCCTTTTATGCT+TGG | + | chr8.1:73956290-73956309 | MS.gene95295:intron | 35.0% |
| !! | GTTATCTTTTGGGAAATCAG+TGG | + | chr8.1:73956728-73956747 | MS.gene95295:CDS | 35.0% |
| !!! | ATTGGTTTTCCAGTGAGAAT+AGG | - | chr8.1:73954103-73954122 | None:intergenic | 35.0% |
| !!! | TATTTTAGTACCTGCAGGAT+TGG | - | chr8.1:73955613-73955632 | None:intergenic | 35.0% |
| !!! | TTGTTTTTGTCTAGGGTGTA+AGG | + | chr8.1:73955921-73955940 | MS.gene95295:intron | 35.0% |
| AACTGATCCTGAAAGCTTCA+AGG | + | chr8.1:73954006-73954025 | MS.gene95295:CDS | 40.0% | |
| AAGCTATCACAAGCTAAAGG+GGG | + | chr8.1:73954880-73954899 | MS.gene95295:CDS | 40.0% | |
| AATGCATGGGATTGAGCAAT+TGG | + | chr8.1:73955265-73955284 | MS.gene95295:CDS | 40.0% | |
| AGAGGCTAACAAAGGATACT+GGG | + | chr8.1:73953900-73953919 | MS.gene95295:CDS | 40.0% | |
| AGCAAGCTATCACAAGCTAA+AGG | + | chr8.1:73954877-73954896 | MS.gene95295:CDS | 40.0% | |
| AGTGAGTGAGTGGACAATTA+TGG | + | chr8.1:73956126-73956145 | MS.gene95295:intron | 40.0% | |
| ATGGGATTGAGCAATTGGTA+TGG | + | chr8.1:73955270-73955289 | MS.gene95295:CDS | 40.0% | |
| ATGTTCCTTTCCGAACAAGT+CGG | - | chr8.1:73956865-73956884 | None:intergenic | 40.0% | |
| CAAGCTATCACAAGCTAAAG+GGG | + | chr8.1:73954879-73954898 | MS.gene95295:CDS | 40.0% | |
| CCATACTCAGAAGTCAACAA+AGG | - | chr8.1:73955399-73955418 | None:intergenic | 40.0% | |
| CTTGATCCACAAGAAATGCA+TGG | + | chr8.1:73955251-73955270 | MS.gene95295:CDS | 40.0% | |
| GATGTTTCTCCTATTCTCAC+TGG | + | chr8.1:73954091-73954110 | MS.gene95295:CDS | 40.0% | |
| GCAAGCTATCACAAGCTAAA+GGG | + | chr8.1:73954878-73954897 | MS.gene95295:CDS | 40.0% | |
| GCCAATGTATTCAGAAATCC+AGG | + | chr8.1:73954925-73954944 | MS.gene95295:CDS | 40.0% | |
| GCTGAATACTTGCAGAGTTT+AGG | + | chr8.1:73953971-73953990 | MS.gene95295:CDS | 40.0% | |
| GGACTGAATATCACATCATG+AGG | - | chr8.1:73954994-73955013 | None:intergenic | 40.0% | |
| GGATACTGGGAATGTTCAAA+AGG | + | chr8.1:73953913-73953932 | MS.gene95295:CDS | 40.0% | |
| GGCTTATACAGATATAGGCT+AGG | + | chr8.1:73956491-73956510 | MS.gene95295:intron | 40.0% | |
| GGGTTAACTGATGTGAAGAT+TGG | + | chr8.1:73955564-73955583 | MS.gene95295:CDS | 40.0% | |
| GGTTTGATATATCTGCACTG+TGG | - | chr8.1:73954295-73954314 | None:intergenic | 40.0% | |
| GTAACAGAACAAAGTAGCAG+TGG | - | chr8.1:73955853-73955872 | None:intergenic | 40.0% | |
| GTCACAACTTGATGGAACTA+AGG | + | chr8.1:73955524-73955543 | MS.gene95295:CDS | 40.0% | |
| GTCATGTCACCAAGCATAAA+AGG | - | chr8.1:73956302-73956321 | None:intergenic | 40.0% | |
| GTGCAGGCTTATACAGATAT+AGG | + | chr8.1:73956486-73956505 | MS.gene95295:intron | 40.0% | |
| GTTGTTGATGTGTCAGTGTT+TGG | - | chr8.1:73954489-73954508 | None:intergenic | 40.0% | |
| GTTTCCTATCCAAAATGGCA+AGG | + | chr8.1:73954834-73954853 | MS.gene95295:CDS | 40.0% | |
| TATGTTCAAGGGATCATGAC+TGG | + | chr8.1:73955324-73955343 | MS.gene95295:CDS | 40.0% | |
| TCAATCCCATGCATTTCTTG+TGG | - | chr8.1:73955260-73955279 | None:intergenic | 40.0% | |
| TCTGAGTATGGTTCTTCTGA+AGG | + | chr8.1:73955408-73955427 | MS.gene95295:CDS | 40.0% | |
| TGGATCAAGTTAGCTAGTTC+AGG | - | chr8.1:73955240-73955259 | None:intergenic | 40.0% | |
| TTCATTGCATGCTTGTATCC+TGG | - | chr8.1:73954946-73954965 | None:intergenic | 40.0% | |
| ! | AGTATGGTTCTTCTGAAGGT+TGG | + | chr8.1:73955412-73955431 | MS.gene95295:CDS | 40.0% |
| ! | CCGGACACTATGTTATCTTT+TGG | + | chr8.1:73956717-73956736 | MS.gene95295:CDS | 40.0% |
| ! | CTTGGTGACATGACCTTTAT+GGG | + | chr8.1:73956308-73956327 | MS.gene95295:intron | 40.0% |
| ! | GACAAGTCTTTTGTTGATGC+TGG | + | chr8.1:73956794-73956813 | MS.gene95295:CDS | 40.0% |
| ! | GTTCCATCAAGTTGTGACAA+AGG | - | chr8.1:73955522-73955541 | None:intergenic | 40.0% |
| ! | TTGCAGAGTTTAGGACTGAA+TGG | + | chr8.1:73953980-73953999 | MS.gene95295:CDS | 40.0% |
| !! | ATGAAAGCACTTCAATCTCC+TGG | + | chr8.1:73954961-73954980 | MS.gene95295:CDS | 40.0% |
| !! | CCTTTGTTGACTTCTGAGTA+TGG | + | chr8.1:73955396-73955415 | MS.gene95295:CDS | 40.0% |
| !! | TGCAACACTTTGGTGTTTGT+AGG | - | chr8.1:73956962-73956981 | None:intergenic | 40.0% |
| AAAGCAGTCCACATAAGAGG+TGG | - | chr8.1:73955041-73955060 | None:intergenic | 45.0% | |
| AACAAAGTAGCAGTGGTTGG+TGG | - | chr8.1:73955846-73955865 | None:intergenic | 45.0% | |
| ACACATGCCTTGAAGCTTTC+AGG | - | chr8.1:73954016-73954035 | None:intergenic | 45.0% | |
| CACCAACACATGTTAGACAC+TGG | + | chr8.1:73954577-73954596 | MS.gene95295:intron | 45.0% | |
| CAGAACAAAGTAGCAGTGGT+TGG | - | chr8.1:73955849-73955868 | None:intergenic | 45.0% | |
| CCTGTTCCTAAAGGCAAAAG+AGG | - | chr8.1:73954316-73954335 | None:intergenic | 45.0% | |
| CTTCAAGGCATGTGTTCCAT+TGG | + | chr8.1:73954021-73954040 | MS.gene95295:CDS | 45.0% | |
| GAGAGGCTAACAAAGGATAC+TGG | + | chr8.1:73953899-73953918 | MS.gene95295:CDS | 45.0% | |
| GAGTGAGTGGACAATTATGG+AGG | + | chr8.1:73956129-73956148 | MS.gene95295:intron | 45.0% | |
| GCTGCTGTAGATGAAGCTTA+AGG | - | chr8.1:73954860-73954879 | None:intergenic | 45.0% | |
| GTATGTTGTGAGTGAGTGAG+TGG | + | chr8.1:73956116-73956135 | MS.gene95295:intron | 45.0% | |
| TGAGTCAGTTCAAGACACCT+AGG | + | chr8.1:73956927-73956946 | MS.gene95295:CDS | 45.0% | |
| TGCAAAGCAGTCCACATAAG+AGG | - | chr8.1:73955044-73955063 | None:intergenic | 45.0% | |
| TGCCAGTGTCTAACATGTGT+TGG | - | chr8.1:73954582-73954601 | None:intergenic | 45.0% | |
| TGTTCGACATCGACATGCTT+TGG | - | chr8.1:73954723-73954742 | None:intergenic | 45.0% | |
| TTCACATCAGTTAACCCCAC+TGG | - | chr8.1:73955561-73955580 | None:intergenic | 45.0% | |
| TTTGTAGGAGCAACACACCT+AGG | - | chr8.1:73956947-73956966 | None:intergenic | 45.0% | |
| ! | GAAGCAAGTGATGAAGTGCT+TGG | + | chr8.1:73956752-73956771 | MS.gene95295:CDS | 45.0% |
| ! | GCTTGGTGACATGACCTTTA+TGG | + | chr8.1:73956307-73956326 | MS.gene95295:intron | 45.0% |
| ! | TGCAGTTCTGGTACTAGTCA+AGG | + | chr8.1:73954228-73954247 | MS.gene95295:intron | 45.0% |
| !! | AGCTTAAGGCCTTGCCATTT+TGG | - | chr8.1:73954846-73954865 | None:intergenic | 45.0% |
| !! | CCTCTTTTGCCTTTAGGAAC+AGG | + | chr8.1:73954313-73954332 | MS.gene95295:CDS | 45.0% |
| !! | GTTGTTTTCACCAATCCTGC+AGG | + | chr8.1:73955600-73955619 | MS.gene95295:CDS | 45.0% |
| !!! | AAGGCCTTGCCATTTTGGAT+AGG | - | chr8.1:73954841-73954860 | None:intergenic | 45.0% |
| AAGGTAGAGCTTGAGCCAGT+GGG | + | chr8.1:73955543-73955562 | MS.gene95295:CDS | 50.0% | |
| AGAGGTGGCAGTAGAGTGAT+TGG | - | chr8.1:73955026-73955045 | None:intergenic | 50.0% | |
| AGGGATCATGACTGGTGCAA+TGG | + | chr8.1:73955332-73955351 | MS.gene95295:CDS | 50.0% | |
| AGGGGATGTGGTAAGGGTTA+TGG | + | chr8.1:73956511-73956530 | MS.gene95295:CDS | 50.0% | |
| ATAGGCTAGGGGATGTGGTA+AGG | + | chr8.1:73956504-73956523 | MS.gene95295:CDS | 50.0% | |
| ATGTTAGACACTGGCACACG+TGG | + | chr8.1:73954586-73954605 | MS.gene95295:intron | 50.0% | |
| CAGATATAGGCTAGGGGATG+TGG | + | chr8.1:73956499-73956518 | MS.gene95295:CDS | 50.0% | |
| CCGAACAAGTCGGAGTTCAA+GGG | - | chr8.1:73956855-73956874 | None:intergenic | 50.0% | |
| CTCTACTGCCACCTCTTATG+TGG | + | chr8.1:73955030-73955049 | MS.gene95295:CDS | 50.0% | |
| GGGGATGTGGTAAGGGTTAT+GGG | + | chr8.1:73956512-73956531 | MS.gene95295:CDS | 50.0% | |
| GTTGAGACACTATGCAGGAG+AGG | + | chr8.1:73955371-73955390 | MS.gene95295:CDS | 50.0% | |
| TAAGGTAGAGCTTGAGCCAG+TGG | + | chr8.1:73955542-73955561 | MS.gene95295:CDS | 50.0% | |
| TAGGCTAGGGGATGTGGTAA+GGG | + | chr8.1:73956505-73956524 | MS.gene95295:CDS | 50.0% | |
| TCCGAACAAGTCGGAGTTCA+AGG | - | chr8.1:73956856-73956875 | None:intergenic | 50.0% | |
| TGGGATTGGGAGAGAAGAAG+TGG | + | chr8.1:73956268-73956287 | MS.gene95295:intron | 50.0% | |
| ! | CCCTTGAACTCCGACTTGTT+CGG | + | chr8.1:73956852-73956871 | MS.gene95295:CDS | 50.0% |
| ! | GAACTCCGACTTGTTCGGAA+AGG | + | chr8.1:73956857-73956876 | MS.gene95295:CDS | 50.0% |
| ! | GCAAACTCAGGAGCCACTTT+AGG | - | chr8.1:73955456-73955475 | None:intergenic | 50.0% |
| ! | GTCTAGGGTGTAAGGTAGAG+TGG | + | chr8.1:73955929-73955948 | MS.gene95295:intron | 50.0% |
| ACATCATGAGGGCTGCATCC+AGG | - | chr8.1:73954982-73955001 | None:intergenic | 55.0% | |
| AGGTAGAGCTTGAGCCAGTG+GGG | + | chr8.1:73955544-73955563 | MS.gene95295:CDS | 55.0% | |
| CTGCATGACACCGACACATG+TGG | - | chr8.1:73954549-73954568 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 73953848 | 73957033 | 73953848 | ID=MS.gene95295 |
| chr8.1 | mRNA | 73953848 | 73957033 | 73953848 | ID=MS.gene95295.t1;Parent=MS.gene95295 |
| chr8.1 | exon | 73953848 | 73954140 | 73953848 | ID=MS.gene95295.t1.exon1;Parent=MS.gene95295.t1 |
| chr8.1 | CDS | 73953848 | 73954140 | 73953848 | ID=cds.MS.gene95295.t1;Parent=MS.gene95295.t1 |
| chr8.1 | exon | 73954233 | 73954334 | 73954233 | ID=MS.gene95295.t1.exon2;Parent=MS.gene95295.t1 |
| chr8.1 | CDS | 73954233 | 73954334 | 73954233 | ID=cds.MS.gene95295.t1;Parent=MS.gene95295.t1 |
| chr8.1 | exon | 73954831 | 73955621 | 73954831 | ID=MS.gene95295.t1.exon3;Parent=MS.gene95295.t1 |
| chr8.1 | CDS | 73954831 | 73955621 | 73954831 | ID=cds.MS.gene95295.t1;Parent=MS.gene95295.t1 |
| chr8.1 | exon | 73956492 | 73957033 | 73956492 | ID=MS.gene95295.t1.exon4;Parent=MS.gene95295.t1 |
| chr8.1 | CDS | 73956492 | 73957033 | 73956492 | ID=cds.MS.gene95295.t1;Parent=MS.gene95295.t1 |
| Gene Sequence |
| Protein sequence |
