AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene98716

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene98716.t1 MTR_2g098790 93.191 514 35 0 1 514 1 514 0.0 998
MS.gene98716.t1 MTR_2g098540 86.301 511 67 1 5 515 1 508 0.0 920
MS.gene98716.t1 MTR_2g098520 85.519 511 74 0 5 515 1 511 0.0 908
MS.gene98716.t1 MTR_2g098540 87.582 459 57 0 57 515 6 464 0.0 852
MS.gene98716.t1 MTR_4g066580 69.574 516 154 2 1 514 1 515 0.0 767
MS.gene98716.t1 MTR_3g028720 69.591 513 151 2 7 514 2 514 0.0 763
MS.gene98716.t1 MTR_4g066590 68.504 508 159 1 5 512 1 507 0.0 749
MS.gene98716.t1 MTR_4g066240 67.520 508 165 0 7 514 5 512 0.0 741
MS.gene98716.t1 MTR_4g066240 67.387 509 165 1 7 514 5 513 0.0 736
MS.gene98716.t1 MTR_4g066630 66.667 513 170 1 1 512 1 513 0.0 735
MS.gene98716.t1 MTR_6g078450 70.981 479 139 0 36 514 34 512 0.0 734
MS.gene98716.t1 MTR_5g071520 68.182 528 150 4 1 514 1 524 0.0 733
MS.gene98716.t1 MTR_4g066210 68.944 483 150 0 32 514 37 519 0.0 729
MS.gene98716.t1 MTR_6g078330 67.836 513 162 2 5 514 1 513 0.0 726
MS.gene98716.t1 MTR_4g066640 67.004 494 159 2 22 514 23 513 0.0 711
MS.gene98716.t1 MTR_4g066330 65.703 519 147 4 1 514 1 493 0.0 707
MS.gene98716.t1 MTR_6g078380 66.151 517 168 4 1 514 1 513 0.0 699
MS.gene98716.t1 MTR_4g066280 63.492 504 156 2 14 515 17 494 0.0 682
MS.gene98716.t1 MTR_3g028720 69.651 458 134 2 7 459 2 459 0.0 675
MS.gene98716.t1 MTR_4g066340 70.320 438 129 1 78 514 2 439 0.0 671
MS.gene98716.t1 MTR_3g026280 62.708 480 174 2 35 514 19 493 0.0 651
MS.gene98716.t1 MTR_4g066630 66.013 459 155 1 1 458 1 459 0.0 650
MS.gene98716.t1 MTR_6g078450 71.226 424 122 0 36 459 34 457 0.0 649
MS.gene98716.t1 MTR_4g066580 70.118 425 124 2 1 423 1 424 0.0 627
MS.gene98716.t1 MTR_4g023000 60.879 478 181 3 37 514 23 494 0.0 624
MS.gene98716.t1 MTR_3g028720 70.379 422 120 2 7 423 2 423 0.0 624
MS.gene98716.t1 MTR_6g078330 69.438 409 125 0 106 514 1 409 0.0 610
MS.gene98716.t1 MTR_4g066630 66.745 424 140 1 1 423 1 424 0.0 603
MS.gene98716.t1 MTR_4g066240 66.667 417 139 0 7 423 5 421 0.0 598
MS.gene98716.t1 MTR_4g067040 67.734 406 131 0 5 410 1 406 0.0 585
MS.gene98716.t1 MTR_4g015420 55.599 509 185 7 19 514 45 525 0.0 583
MS.gene98716.t1 MTR_6g078330 67.506 397 127 1 118 514 15 409 0.0 573
MS.gene98716.t1 MTR_3g026400 55.050 505 217 5 13 512 8 507 0.0 571
MS.gene98716.t1 MTR_3g028720 70.130 385 110 2 7 386 2 386 0.0 567
MS.gene98716.t1 MTR_2g043200 58.159 478 166 6 43 514 70 519 0.0 565
MS.gene98716.t1 MTR_4g067040 68.848 382 119 0 5 386 1 382 0.0 559
MS.gene98716.t1 MTR_3g026620 53.981 515 227 5 5 514 1 510 0.0 556
MS.gene98716.t1 MTR_3g026400 56.317 467 196 5 47 512 17 476 0.0 545
MS.gene98716.t1 MTR_4g015460 54.819 498 186 8 28 514 32 501 0.0 544
MS.gene98716.t1 MTR_4g066630 68.011 372 118 1 1 371 1 372 0.0 543
MS.gene98716.t1 MTR_4g083000 51.550 516 233 6 1 513 1 502 0.0 537
MS.gene98716.t1 MTR_5g044000 49.710 517 231 7 21 512 8 520 0.0 521
MS.gene98716.t1 MTR_4g066640 64.921 382 127 3 13 390 11 389 0.0 521
MS.gene98716.t1 MTR_6g078330 66.048 377 125 2 5 378 1 377 0.0 515
MS.gene98716.t1 MTR_4g081530 49.184 490 241 5 28 513 14 499 3.35e-171 493
MS.gene98716.t1 MTR_0110s0040 47.490 518 261 6 1 514 2 512 1.35e-170 491
MS.gene98716.t1 MTR_0110s0030 47.104 518 263 6 1 514 2 512 1.68e-170 491
MS.gene98716.t1 MTR_3g033790 48.958 480 223 7 38 513 19 480 2.09e-164 475
MS.gene98716.t1 MTR_3g033810 48.333 480 233 5 35 513 18 483 4.01e-163 472
MS.gene98716.t1 MTR_4g131810 46.849 476 248 4 43 515 33 506 5.69e-163 473
MS.gene98716.t1 MTR_7g068910 47.929 507 246 7 12 514 3 495 5.63e-162 470
MS.gene98716.t1 MTR_2g022760 46.899 516 261 7 4 515 6 512 1.64e-161 469
MS.gene98716.t1 MTR_7g068910 47.002 517 246 8 12 514 3 505 7.24e-159 462
MS.gene98716.t1 MTR_2g079580 44.531 512 273 8 3 512 1 503 9.73e-154 449
MS.gene98716.t1 MTR_2g079550 45.098 510 269 8 5 512 1 501 2.20e-153 448
MS.gene98716.t1 MTR_4g083000 52.311 411 190 4 106 513 1 408 4.46e-153 443
MS.gene98716.t1 MTR_2g022710 43.307 508 277 7 10 515 12 510 8.52e-150 439
MS.gene98716.t1 MTR_4g016920 46.042 480 241 7 36 512 25 489 3.81e-149 437
MS.gene98716.t1 MTR_4g131800 44.961 516 268 6 2 515 490 991 1.29e-148 452
MS.gene98716.t1 MTR_3g026400 56.216 370 152 5 13 377 8 372 4.73e-146 424
MS.gene98716.t1 MTR_7g033860 44.885 479 241 7 40 512 50 511 1.05e-144 426
MS.gene98716.t1 MTR_5g068740 44.764 487 246 9 32 513 21 489 1.75e-144 425
MS.gene98716.t1 MTR_1g088610 45.455 484 246 7 32 513 21 488 1.86e-143 427
MS.gene98716.t1 MTR_1g088610 34.028 144 72 3 387 513 476 613 5.94e-17 84.3
MS.gene98716.t1 MTR_0108s0030 42.706 473 242 3 40 512 5 448 4.81e-136 401
MS.gene98716.t1 MTR_2g079580 45.863 423 219 7 3 423 1 415 3.05e-129 382
MS.gene98716.t1 MTR_2g022760 46.359 412 216 4 106 515 1 409 4.14e-129 382
MS.gene98716.t1 MTR_2g022710 42.478 452 250 6 10 459 12 455 1.14e-126 378
MS.gene98716.t1 MTR_2g022710 42.478 452 250 6 10 459 12 455 1.79e-126 378
MS.gene98716.t1 MTR_7g068900 45.652 414 213 4 101 513 17 419 7.94e-125 374
MS.gene98716.t1 MTR_2g022710 44.471 416 221 6 10 423 12 419 2.41e-124 370
MS.gene98716.t1 MTR_0110s0040 47.781 383 192 4 1 379 2 380 4.91e-124 369
MS.gene98716.t1 MTR_7g051510 42.469 478 253 5 39 514 76 533 7.80e-122 368
MS.gene98716.t1 MTR_4g016920 45.122 410 208 6 106 512 1 396 8.74e-122 364
MS.gene98716.t1 MTR_1g088630 43.261 460 217 9 57 513 14 432 3.92e-121 363
MS.gene98716.t1 MTR_7g051650 42.292 480 248 7 39 512 76 532 5.67e-121 365
MS.gene98716.t1 MTR_7g051610 42.767 477 249 6 39 512 76 531 7.52e-121 365
MS.gene98716.t1 MTR_2g022710 42.233 412 233 4 106 515 1 409 9.27e-121 361
MS.gene98716.t1 MTR_7g051650 42.138 477 249 7 39 512 76 528 2.04e-120 364
MS.gene98716.t1 MTR_2g022710 44.030 402 215 6 10 409 12 405 7.60e-119 356
MS.gene98716.t1 MTR_2g022710 44.591 379 200 6 10 386 12 382 3.76e-110 334
MS.gene98716.t1 MTR_1g088630 48.083 339 145 6 40 376 29 338 5.54e-105 318
MS.gene98716.t1 MTR_7g056747 41.063 414 218 5 100 512 9 397 6.95e-102 312
MS.gene98716.t1 MTR_4g016920 50.916 273 131 2 106 377 1 271 1.31e-96 295
MS.gene98716.t1 MTR_1g088630 53.759 266 117 3 40 304 29 289 6.44e-96 293
MS.gene98716.t1 MTR_0110s0020 51.172 256 119 4 11 266 18 267 8.74e-86 267
MS.gene98716.t1 MTR_5g069350 45.665 173 53 5 352 514 48 189 4.35e-33 124
MS.gene98716.t1 MTR_4g122980 25.714 420 233 13 102 512 183 532 2.73e-28 119
MS.gene98716.t1 MTR_8g038650 37.879 132 69 2 238 359 24 152 1.66e-24 100
MS.gene98716.t1 MTR_8g038650 48.214 56 28 1 45 100 5 59 2.91e-11 62.4
MS.gene98716.t1 MTR_7g028885 44.286 70 35 1 244 309 21 90 7.56e-12 62.0
MS.gene98716.t1 MTR_4g061170 65.854 41 12 1 461 499 24 64 1.78e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene98716.t1 AT5G42260 53.877 503 219 5 7 508 7 497 0.0 570
MS.gene98716.t1 AT5G44640 53.094 501 228 4 14 512 6 501 0.0 568
MS.gene98716.t1 AT2G44480 53.669 477 220 1 36 512 33 508 0.0 565
MS.gene98716.t1 AT2G44450 54.737 475 210 2 38 512 31 500 0.0 565
MS.gene98716.t1 AT2G44480 53.669 477 220 1 36 512 64 539 0.0 565
MS.gene98716.t1 AT3G60130 55.136 477 208 3 38 513 30 501 0.0 555
MS.gene98716.t1 AT5G24550 51.081 509 242 6 10 514 6 511 0.0 543
MS.gene98716.t1 AT1G47600 52.174 483 216 7 34 514 41 510 0.0 528
MS.gene98716.t1 AT1G47600 52.174 483 217 7 34 514 41 511 0.0 528
MS.gene98716.t1 AT5G54570 52.401 479 223 4 37 512 29 505 0.0 526
MS.gene98716.t1 AT2G25630 51.815 496 215 5 19 512 10 483 0.0 526
MS.gene98716.t1 AT1G51470 51.760 483 219 7 34 514 41 511 0.0 524
MS.gene98716.t1 AT5G24540 51.473 509 240 6 10 514 6 511 0.0 522
MS.gene98716.t1 AT1G26560 51.975 481 225 5 35 512 29 506 0.0 522
MS.gene98716.t1 AT3G60140 47.638 508 249 5 10 514 11 504 5.15e-179 515
MS.gene98716.t1 AT3G18080 50.311 483 232 6 33 514 34 509 4.30e-173 498
MS.gene98716.t1 AT2G44470 45.930 516 266 6 3 514 1 507 8.62e-173 500
MS.gene98716.t1 AT2G44460 47.921 505 254 6 11 512 6 504 2.39e-168 488
MS.gene98716.t1 AT3G18070 48.276 493 235 9 24 514 18 492 9.60e-168 484
MS.gene98716.t1 AT3G18070 48.276 493 241 9 24 514 18 498 1.19e-166 481
MS.gene98716.t1 AT3G60120 49.072 485 236 7 36 514 12 491 2.73e-166 482
MS.gene98716.t1 AT2G44480 51.597 407 196 1 106 512 1 406 5.92e-166 476
MS.gene98716.t1 AT3G60130 54.217 415 184 3 100 513 40 449 2.24e-165 476
MS.gene98716.t1 AT5G25980 47.173 513 255 9 11 513 17 523 8.78e-165 478
MS.gene98716.t1 AT2G44490 47.095 482 249 5 37 513 13 493 4.12e-164 477
MS.gene98716.t1 AT5G36890 50.630 476 222 4 39 513 17 480 7.83e-164 474
MS.gene98716.t1 AT5G36890 50.630 476 222 4 39 513 17 480 1.12e-163 473
MS.gene98716.t1 AT2G32860 48.333 480 242 5 37 512 93 570 1.22e-163 478
MS.gene98716.t1 AT2G32860 47.390 479 249 3 37 512 93 571 7.62e-163 476
MS.gene98716.t1 AT5G54570 52.235 425 199 3 37 459 29 451 1.24e-161 466
MS.gene98716.t1 AT5G26000 50.104 483 224 10 38 512 38 511 2.24e-161 469
MS.gene98716.t1 AT1G75940 48.247 485 237 8 38 512 37 517 5.55e-157 458
MS.gene98716.t1 AT3G60130 52.530 415 180 4 100 513 40 438 5.40e-156 452
MS.gene98716.t1 AT3G03640 43.969 514 281 5 7 514 2 514 6.60e-155 452
MS.gene98716.t1 AT1G61820 44.854 515 270 7 5 514 1 506 1.18e-153 449
MS.gene98716.t1 AT5G24540 50.221 452 219 5 10 458 6 454 3.79e-153 445
MS.gene98716.t1 AT3G21370 46.185 498 257 8 24 513 18 512 7.85e-152 444
MS.gene98716.t1 AT3G09260 45.363 496 259 8 26 514 22 512 8.56e-151 442
MS.gene98716.t1 AT5G54570 51.220 410 195 4 106 512 1 408 4.67e-150 436
MS.gene98716.t1 AT1G02850 46.584 483 237 8 35 513 21 486 7.40e-150 438
MS.gene98716.t1 AT2G44470 45.316 459 239 5 3 458 1 450 2.42e-149 435
MS.gene98716.t1 AT5G28510 45.070 497 253 8 29 512 30 519 6.36e-149 437
MS.gene98716.t1 AT4G21760 42.054 516 285 7 2 512 15 521 3.51e-148 436
MS.gene98716.t1 AT1G61810 43.217 516 282 7 5 515 1 510 5.40e-147 432
MS.gene98716.t1 AT1G52400 44.101 517 271 10 9 513 6 516 8.50e-147 431
MS.gene98716.t1 AT1G52400 44.101 517 271 10 9 513 6 516 8.50e-147 431
MS.gene98716.t1 AT5G25980 47.265 457 227 7 11 459 17 467 1.48e-146 429
MS.gene98716.t1 AT5G25980 47.265 457 227 7 11 459 17 467 1.48e-146 429
MS.gene98716.t1 AT3G60140 48.649 407 206 3 19 423 7 412 1.62e-145 426
MS.gene98716.t1 AT1G02850 44.664 506 236 9 35 513 21 509 2.26e-145 427
MS.gene98716.t1 AT1G02850 44.773 507 235 10 35 513 21 510 1.89e-144 425
MS.gene98716.t1 AT1G66270 45.691 499 254 10 25 514 22 512 9.93e-144 424
MS.gene98716.t1 AT1G66280 44.656 524 264 10 1 512 1 510 1.88e-143 423
MS.gene98716.t1 AT5G26000 50.234 428 198 8 38 459 38 456 4.31e-142 417
MS.gene98716.t1 AT4G27830 43.776 482 252 7 34 512 19 484 5.40e-142 419
MS.gene98716.t1 AT1G61810 43.426 502 273 7 5 501 1 496 5.91e-142 420
MS.gene98716.t1 AT4G21760 41.279 516 279 8 2 512 15 511 8.32e-142 419
MS.gene98716.t1 AT1G66270 45.491 499 253 11 25 514 22 510 7.74e-141 416
MS.gene98716.t1 AT1G02850 45.135 483 217 9 35 513 21 459 8.38e-139 409
MS.gene98716.t1 AT2G44450 51.695 354 166 2 159 512 1 349 2.26e-137 401
MS.gene98716.t1 AT4G27820 43.416 486 240 8 37 512 22 482 1.30e-135 402
MS.gene98716.t1 AT4G22100 42.262 504 261 10 13 513 7 483 2.41e-134 399
MS.gene98716.t1 AT2G44480 57.508 313 131 2 36 348 64 374 8.21e-134 394
MS.gene98716.t1 AT1G60090 41.188 505 268 10 13 513 4 483 5.47e-133 395
MS.gene98716.t1 AT1G60090 41.061 509 270 11 13 513 4 490 1.02e-131 392
MS.gene98716.t1 AT3G62750 40.637 502 260 10 17 512 4 473 1.15e-130 389
MS.gene98716.t1 AT3G62750 40.637 502 260 10 17 512 30 499 1.58e-130 390
MS.gene98716.t1 AT2G44470 45.750 400 205 5 3 399 1 391 7.43e-129 381
MS.gene98716.t1 AT1G45191 41.597 476 256 9 39 513 30 484 2.22e-127 381
MS.gene98716.t1 AT1G45191 41.509 477 261 9 39 513 30 490 2.79e-126 379
MS.gene98716.t1 AT1G45191 41.494 482 259 9 39 513 30 495 4.32e-126 378
MS.gene98716.t1 AT1G45191 41.057 492 259 10 39 513 30 507 9.42e-125 375
MS.gene98716.t1 AT1G02850 46.265 415 186 7 35 423 21 424 1.36e-122 366
MS.gene98716.t1 AT5G48375 43.750 448 183 8 35 480 35 415 1.15e-121 364
MS.gene98716.t1 AT3G62740 38.235 510 281 9 5 512 1 478 1.35e-120 363
MS.gene98716.t1 AT1G52400 43.392 454 242 8 12 458 15 460 2.10e-120 362
MS.gene98716.t1 AT1G61810 43.632 424 229 6 5 423 1 419 6.40e-119 357
MS.gene98716.t1 AT1G61810 42.615 413 231 5 106 515 1 410 1.43e-116 350
MS.gene98716.t1 AT3G18070 48.580 352 170 7 24 373 18 360 7.94e-116 347
MS.gene98716.t1 AT1G51490 51.009 347 155 6 46 390 28 361 1.39e-115 347
MS.gene98716.t1 AT4G27830 42.927 410 217 6 106 512 1 396 9.13e-115 346
MS.gene98716.t1 AT3G62750 39.778 450 234 9 17 461 30 447 2.32e-112 341
MS.gene98716.t1 AT2G44460 47.632 359 184 4 157 512 1 358 3.29e-111 337
MS.gene98716.t1 AT4G27820 42.206 417 211 7 106 512 1 397 1.28e-108 330
MS.gene98716.t1 AT4G27820 42.206 417 211 7 106 512 1 397 1.28e-108 330
MS.gene98716.t1 AT1G60270 42.547 369 193 6 9 374 3 355 5.99e-106 322
MS.gene98716.t1 AT3G18070 46.789 327 167 5 190 514 100 421 6.60e-106 323
MS.gene98716.t1 AT3G18070 50.649 77 35 2 24 100 18 91 3.31e-15 78.2
MS.gene98716.t1 AT3G62740 37.582 455 251 7 5 458 1 423 1.31e-104 320
MS.gene98716.t1 AT2G44480 46.358 302 161 1 211 512 2 302 3.94e-104 315
MS.gene98716.t1 AT1G61820 43.443 366 202 4 152 514 4 367 1.37e-103 315
MS.gene98716.t1 AT3G62750 41.316 380 201 6 17 392 4 365 2.23e-103 315
MS.gene98716.t1 AT3G62750 41.316 380 201 6 17 392 4 365 2.23e-103 315
MS.gene98716.t1 AT3G62750 39.952 413 217 8 106 512 1 388 4.09e-103 315
MS.gene98716.t1 AT3G62750 39.952 413 217 8 106 512 1 388 4.09e-103 315
MS.gene98716.t1 AT1G45191 44.543 339 178 4 39 377 30 358 3.94e-102 313
MS.gene98716.t1 AT1G45191 43.466 352 189 4 39 390 30 371 4.09e-102 313
MS.gene98716.t1 AT3G62750 43.732 343 175 5 17 359 30 354 6.80e-102 313
MS.gene98716.t1 AT3G18070 46.178 314 162 5 203 514 1 309 2.88e-100 305
MS.gene98716.t1 AT1G61810 48.525 305 150 4 5 307 1 300 7.01e-97 296
MS.gene98716.t1 AT1G60270 44.853 272 143 4 106 374 1 268 4.75e-81 254
MS.gene98716.t1 AT3G18070 45.992 237 124 3 190 424 100 334 1.18e-73 237
MS.gene98716.t1 AT3G18070 50.649 77 35 2 24 100 18 91 1.37e-15 78.6
MS.gene98716.t1 AT3G18070 45.089 224 119 3 203 424 1 222 3.28e-68 219
MS.gene98716.t1 AT5G16580 37.037 297 164 8 178 469 21 299 3.35e-53 182
MS.gene98716.t1 AT3G06510 25.000 436 254 14 101 513 159 544 2.68e-27 116
MS.gene98716.t1 AT3G06510 24.823 423 237 12 101 513 159 510 1.74e-26 114

Find 110 sgRNAs with CRISPR-Local

Find 309 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGATTTACATCACCGAAAA+TGG 0.206490 2.1:-5596761 MS.gene98716:intron
AATTGCACTGGTGGTGATTC+AGG 0.216969 2.1:-5598212 MS.gene98716:CDS
CATCATGAGGAATATGAATT+TGG 0.231935 2.1:-5599003 MS.gene98716:CDS
TAACAATGATTACAGGTATA+TGG 0.264543 2.1:-5597280 MS.gene98716:intron
CCCCTGGTCGATGTTCTAAA+TGG 0.265287 2.1:-5598244 MS.gene98716:CDS
GAAATGCTTACTTGTAATAT+TGG 0.267768 2.1:+5597059 None:intergenic
CAATTCTATAAGTGTCTATA+AGG 0.270662 2.1:+5596523 None:intergenic
GAACTTTGTTTCAAAGAGTT+TGG 0.272614 2.1:-5598344 MS.gene98716:CDS
TCAATAGAAGGAAAACTTAA+TGG 0.273460 2.1:-5598847 MS.gene98716:intron
AAGCAAGCAAGACTACTTAA+AGG 0.279217 2.1:-5597183 MS.gene98716:CDS
CATTCGTAACTCTATTTCAT+TGG 0.286481 2.1:-5598648 MS.gene98716:CDS
GTGGGAGAGGAGCAAGTATA+TGG 0.294748 2.1:-5601125 MS.gene98716:CDS
CTGCGGCATGAGCGAGTAAT+TGG 0.296032 2.1:+5598162 None:intergenic
ACCACTTTGCAGACAACTTT+TGG 0.299570 2.1:+5596205 None:intergenic
AGCGTTTCTTCCTATGCATT+AGG 0.313596 2.1:-5598275 MS.gene98716:CDS
GGACCTTCCTCAAGCTTTAG+AGG 0.321849 2.1:-5598626 MS.gene98716:CDS
AGGAAGGGCGTAAATATAAA+AGG 0.324176 2.1:-5596330 MS.gene98716:CDS
AACAATTCTTGAATTCCTTT+AGG 0.330476 2.1:+5596815 None:intergenic
ATCAATGAGTTGTTGGCTAA+TGG 0.331546 2.1:-5598784 MS.gene98716:intron
GCCAAATCGCATTGCATAAC+CGG 0.338206 2.1:+5596266 None:intergenic
CAAAGTATGCGTTCTCTTGT+TGG 0.339065 2.1:-5597231 MS.gene98716:CDS
ATACGTACCCTTGGACCTAT+TGG 0.348989 2.1:+5596941 None:intergenic
CTTACAGATTCTCGATATCT+TGG 0.359339 2.1:-5598977 MS.gene98716:CDS
GGATATTTCCCTCTTGTTAG+TGG 0.359471 2.1:+5597255 None:intergenic
GCGTTTCTTCCTATGCATTA+GGG 0.363132 2.1:-5598274 MS.gene98716:CDS
TCCGGTTATGCAATGCGATT+TGG 0.363198 2.1:-5596267 MS.gene98716:CDS
CAACCTTATCAATGAGTTGT+TGG 0.388195 2.1:-5598791 MS.gene98716:CDS
GAATCTCAAAAGGGTGTGAT+AGG 0.392493 2.1:-5598036 MS.gene98716:CDS
GACAATTTCGAATGGGCATC+CGG 0.398026 2.1:-5596285 MS.gene98716:CDS
CGAGGGCTAGACTTCATGTT+TGG 0.403769 2.1:-5597946 MS.gene98716:CDS
AGTGAAGAAACATCAAGAAT+TGG 0.408112 2.1:+5601491 None:intergenic
CTACATATAGGAATCTCAAA+AGG 0.412702 2.1:-5598046 MS.gene98716:intron
GTTTCAAAGAGTTTGGAGAT+AGG 0.413061 2.1:-5598337 MS.gene98716:CDS
TGGTTATATGTTTATCCTAA+AGG 0.422005 2.1:-5596830 MS.gene98716:CDS
AAAGGGTCATTTGATTTCCT+TGG 0.428442 2.1:-5597165 MS.gene98716:CDS
ATTCGTAACTCTATTTCATT+GGG 0.434096 2.1:-5598647 MS.gene98716:CDS
TTGGAGATAGGGTGAAGTAT+TGG 0.436696 2.1:-5598325 MS.gene98716:CDS
CAAGCTTTAGAGGACGAGTA+TGG 0.443501 2.1:-5598616 MS.gene98716:CDS
AGTCTACCATTTCTTAGTTG+TGG 0.446083 2.1:+5597105 None:intergenic
TTTCAAAGAGTTTGGAGATA+GGG 0.449196 2.1:-5598336 MS.gene98716:CDS
ACAAGAGAACGCATACTTTG+TGG 0.449458 2.1:+5597234 None:intergenic
TGTAATATTTGACTCCTTCG+TGG 0.449747 2.1:+5598815 None:intergenic
GAGCGCAATGGTATTCCAAT+AGG 0.459542 2.1:-5596956 MS.gene98716:CDS
TAGCCAACAACTCATTGATA+AGG 0.461487 2.1:+5598788 None:intergenic
AGCAAGCAAGACTACTTAAA+GGG 0.462593 2.1:-5597182 MS.gene98716:CDS
TCGACTTTGTTATCAGAAAG+TGG 0.483088 2.1:+5597985 None:intergenic
GCATAACCTTGGTGACTAGT+TGG 0.499925 2.1:-5598014 MS.gene98716:CDS
AATTCTATAAGTGTCTATAA+GGG 0.500908 2.1:+5596524 None:intergenic
TGTGTACAAGAAGAAGTATC+AGG 0.501335 2.1:-5598132 MS.gene98716:intron
GACAGCATCCTCAGCATACC+AGG 0.502054 2.1:-5601432 MS.gene98716:intron
CGTTTCTTGACAATTTCGAA+TGG 0.512026 2.1:-5596293 MS.gene98716:CDS
GATGCACCACAACTAAGAAA+TGG 0.512482 2.1:-5597111 MS.gene98716:CDS
GTTTCTTGACAATTTCGAAT+GGG 0.515280 2.1:-5596292 MS.gene98716:CDS
ATTGCACTGGTGGTGATTCA+GGG 0.518485 2.1:-5598211 MS.gene98716:CDS
GCTTCCTCTAGTGATAATGT+TGG 0.539744 2.1:+5596546 None:intergenic
TAAATATCGCAGGAAGATGT+TGG 0.541513 2.1:-5599026 MS.gene98716:intron
TACGAAGGTGCTGCAAAAGA+AGG 0.541713 2.1:-5601147 MS.gene98716:CDS
ATTTCTTAGTTGTGGTGCAT+CGG 0.545452 2.1:+5597113 None:intergenic
GCTGCAAAAGAAGGTGGGAG+AGG 0.546750 2.1:-5601138 MS.gene98716:CDS
ACCTACACTCATAAGTATCC+AGG 0.547559 2.1:-5601099 MS.gene98716:intron
GGCTAGACTTCATGTTTGGA+TGG 0.552448 2.1:-5597942 MS.gene98716:intron
TGGGAGAGGAGCAAGTATAT+GGG 0.558573 2.1:-5601124 MS.gene98716:CDS
TACATATAGGAATCTCAAAA+GGG 0.567302 2.1:-5598045 MS.gene98716:intron
AACCATTTAGAACATCGACC+AGG 0.567522 2.1:+5598242 None:intergenic
TGGTGATGTGAAACAATGTA+AGG 0.574282 2.1:+5598182 None:intergenic
GAAGAAACGCTGAAAGTGGA+TGG 0.574804 2.1:+5598287 None:intergenic
GATACTTCTTCTTGTACACA+TGG 0.579397 2.1:+5598135 None:intergenic
TGATCAATATTACCGCTACA+AGG 0.580404 2.1:-5599930 MS.gene98716:intron
TGTATCACTTACACAATGAG+AGG 0.581462 2.1:+5598580 None:intergenic
ATGGTATTCCAATAGGTCCA+AGG 0.582492 2.1:-5596949 MS.gene98716:CDS
TACTCGTCCTCTAAAGCTTG+AGG 0.585027 2.1:+5598619 None:intergenic
ACCAAAAGTTGTCTGCAAAG+TGG 0.587657 2.1:-5596206 MS.gene98716:CDS
TTGTGCAGGCAGCTTCAAGT+TGG 0.594346 2.1:-5596850 MS.gene98716:intron
GTATCACTTACACAATGAGA+GGG 0.594957 2.1:+5598581 None:intergenic
ATGTATAATAGTTTAGTCCA+AGG 0.597397 2.1:+5597148 None:intergenic
GGGAAAGATCCCTAATGCAT+AGG 0.598940 2.1:+5598265 None:intergenic
ACCATTTAGAACATCGACCA+GGG 0.600490 2.1:+5598243 None:intergenic
GAAGGTGCTGCAAAAGAAGG+TGG 0.605367 2.1:-5601144 MS.gene98716:CDS
CTTGTACACATGGGCAGCTG+CGG 0.609892 2.1:+5598145 None:intergenic
AAGATATTAGACAGAAGCAA+CGG 0.610214 2.1:-5599965 MS.gene98716:CDS
AGGAAGATGTTGGCATCATG+AGG 0.610478 2.1:-5599016 MS.gene98716:CDS
ATAGGAAGAAACGCTGAAAG+TGG 0.614354 2.1:+5598283 None:intergenic
TTAAGTTTAACTCACTTGGG+AGG 0.619829 2.1:+5598946 None:intergenic
GGTGAAACAACCTCAGCAGA+TGG 0.623491 2.1:+5601512 None:intergenic
TAATCCAACATTATCACTAG+AGG 0.629268 2.1:-5596550 MS.gene98716:CDS
TGGTATTCCAATAGGTCCAA+GGG 0.633354 2.1:-5596948 MS.gene98716:intron
TATATGGAACCACTAACAAG+AGG 0.637187 2.1:-5597264 MS.gene98716:CDS
CAGAAGCAACGGAGATGTCG+CGG 0.639307 2.1:-5599954 MS.gene98716:CDS
TGGTTGAGCTCAAATTGCAC+TGG 0.642131 2.1:-5598224 MS.gene98716:CDS
CAATGAAATAGAGTTACGAA+TGG 0.646334 2.1:+5598649 None:intergenic
AAGGTGCTGCAAAAGAAGGT+GGG 0.649452 2.1:-5601143 MS.gene98716:CDS
CGTCCTCTAAAGCTTGAGGA+AGG 0.650477 2.1:+5598623 None:intergenic
ATAGAAGGAAAACTTAATGG+AGG 0.654831 2.1:-5598844 MS.gene98716:intron
GCTTTAGAGGACGAGTATGG+CGG 0.657871 2.1:-5598613 MS.gene98716:CDS
GAATATAATAGAGATGACGA+TGG 0.658549 2.1:+5596493 None:intergenic
ATAAATACATTACCTTGTAG+CGG 0.659369 2.1:+5599918 None:intergenic
ATATGGAACCACTAACAAGA+GGG 0.664152 2.1:-5597263 MS.gene98716:CDS
ACCTGGATACTTATGAGTGT+AGG 0.665140 2.1:+5601098 None:intergenic
GGGTGTGATAGGCATAACCT+TGG 0.666466 2.1:-5598025 MS.gene98716:CDS
CACCACGCTACCATCTGCTG+AGG 0.667092 2.1:-5601522 MS.gene98716:CDS
AACCTCAGCAGATGGTAGCG+TGG 0.667761 2.1:+5601520 None:intergenic
TTGAGCTCAAATTGCACTGG+TGG 0.668163 2.1:-5598221 MS.gene98716:CDS
ATACTTCTTCTTGTACACAT+GGG 0.687173 2.1:+5598136 None:intergenic
ATATATATCATATAGTACGA+AGG 0.705345 2.1:-5601162 MS.gene98716:intron
CATTTAGAACATCGACCAGG+GGG 0.713839 2.1:+5598245 None:intergenic
CCATTTAGAACATCGACCAG+GGG 0.713905 2.1:+5598244 None:intergenic
AATGAACCAACTAGTCACCA+AGG 0.723424 2.1:+5598008 None:intergenic
AATGGAGGTATAAACCACGA+AGG 0.731217 2.1:-5598829 MS.gene98716:CDS
TATTGGCATTAAAATCAGTG+AGG 0.737201 2.1:+5597076 None:intergenic
GTGATGGAAGCTGAGCGCAA+TGG 0.744090 2.1:-5596968 MS.gene98716:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATTTAATATTATTTA+TGG + chr2.1:5596912-5596931 None:intergenic 0.0%
!! TTTAAAAATAATAATAATAA+TGG - chr2.1:5596490-5596509 MS.gene98716:CDS 0.0%
!!! AATAATATTAAATATTTTAA+TGG - chr2.1:5596914-5596933 MS.gene98716:intron 0.0%
!! GTATTTGAATATTTATTTAT+AGG - chr2.1:5599081-5599100 MS.gene98716:intron 10.0%
!! TAAAAATAGAATTATAACAT+AGG + chr2.1:5597738-5597757 None:intergenic 10.0%
!! TATTTACATAAATATTAGTA+AGG - chr2.1:5599218-5599237 MS.gene98716:intron 10.0%
!!! AAAAATAATAATATTTTACC+TGG + chr2.1:5596349-5596368 None:intergenic 10.0%
!!! AGAGTATTTTTTTTTTTTTT+TGG + chr2.1:5597084-5597103 None:intergenic 10.0%
!!! ATAAATTAAAAACTACATTT+TGG + chr2.1:5596461-5596480 None:intergenic 10.0%
!!! ATACATTTTTATTTTTTTAC+GGG + chr2.1:5598294-5598313 None:intergenic 10.0%
!!! ATTTTATTTTTTATTAGGAA+GGG - chr2.1:5601415-5601434 MS.gene98716:intron 10.0%
!!! ATTTTTTTTTTTTTTTGTGA+TGG - chr2.1:5600776-5600795 MS.gene98716:intron 10.0%
!!! TATTTTATTTTTTATTAGGA+AGG - chr2.1:5601414-5601433 MS.gene98716:intron 10.0%
!!! TTTTAAGTGTATATATATTT+AGG - chr2.1:5600869-5600888 MS.gene98716:intron 10.0%
!!! TTTTTGAAAACTTAATTTTT+AGG - chr2.1:5601172-5601191 MS.gene98716:intron 10.0%
!!! TTTTTTAAAAGATAAATACA+AGG - chr2.1:5598346-5598365 MS.gene98716:CDS 10.0%
!! ATATTACGTTATAGAAAATA+TGG - chr2.1:5596370-5596389 MS.gene98716:intron 15.0%
!! ATTTATCTCTATAATTAGTT+GGG - chr2.1:5600390-5600409 MS.gene98716:intron 15.0%
!! CAGATAAATTATAATAATAG+AGG + chr2.1:5597699-5597718 None:intergenic 15.0%
!! TACAAAGTTATAATATGTTA+TGG + chr2.1:5600846-5600865 None:intergenic 15.0%
!! TATAATTAAGTTATGACTTT+CGG + chr2.1:5597485-5597504 None:intergenic 15.0%
!! TATTTATCTCTATAATTAGT+TGG - chr2.1:5600389-5600408 MS.gene98716:intron 15.0%
!! TATTTATGTAAATATGATCT+AGG + chr2.1:5599212-5599231 None:intergenic 15.0%
!! TCATCATTCTTAATATTATA+GGG + chr2.1:5597890-5597909 None:intergenic 15.0%
!! TTAATTAGGTAAAATAAACT+AGG + chr2.1:5598850-5598869 None:intergenic 15.0%
!! TTCATCATTCTTAATATTAT+AGG + chr2.1:5597891-5597910 None:intergenic 15.0%
!! TTTATTAAACTATCAATAGA+AGG - chr2.1:5598901-5598920 MS.gene98716:intron 15.0%
!!! CATATAGTTATAAACTATTT+TGG + chr2.1:5600010-5600029 None:intergenic 15.0%
!!! GGCTATAATTTTTTTTTTTT+AGG - chr2.1:5598478-5598497 MS.gene98716:intron 15.0%
!!! TATTATTATTGTTTTGCTAT+TGG - chr2.1:5597145-5597164 MS.gene98716:CDS 15.0%
!!! TGTTGTTTCAAAAAAAAATA+TGG - chr2.1:5598692-5598711 MS.gene98716:intron 15.0%
!!! TTTGAGATTAGTTTTTATAA+GGG - chr2.1:5601332-5601351 MS.gene98716:intron 15.0%
!!! TTTTGAGATTAGTTTTTATA+AGG - chr2.1:5601331-5601350 MS.gene98716:intron 15.0%
!! AAATTCAAGTAAACTAAGTA+TGG + chr2.1:5599007-5599026 None:intergenic 20.0%
!! AATATTGTTAAAAAATCCAG+TGG - chr2.1:5598118-5598137 MS.gene98716:intron 20.0%
!! AATTCTATAAGTGTCTATAA+GGG + chr2.1:5601239-5601258 None:intergenic 20.0%
!! ACAACATTAAATGTAAACAA+AGG - chr2.1:5599059-5599078 MS.gene98716:intron 20.0%
!! ATAAAGATAATGAGATTCAA+TGG - chr2.1:5598583-5598602 MS.gene98716:intron 20.0%
!! ATATATATCATATAGTACGA+AGG - chr2.1:5596598-5596617 MS.gene98716:intron 20.0%
!! CATCATTCTTAATATTATAG+GGG + chr2.1:5597889-5597908 None:intergenic 20.0%
!! GAATTCAAAAATATGTAAGA+AGG + chr2.1:5596425-5596444 None:intergenic 20.0%
!! GCAAAAAGATAATTTAAACA+AGG - chr2.1:5596949-5596968 MS.gene98716:CDS 20.0%
!! TACAGAATGATCAATAAATA+AGG + chr2.1:5600726-5600745 None:intergenic 20.0%
!! TGGTACTTTATCATATATAT+AGG - chr2.1:5600209-5600228 MS.gene98716:intron 20.0%
!! TTAATATTATTTATGGTCGT+AGG + chr2.1:5596905-5596924 None:intergenic 20.0%
!!! AAGTTGCAAATCAAATTTTA+TGG - chr2.1:5597450-5597469 MS.gene98716:intron 20.0%
!!! AATTACTTTACTAGTTTTCA+GGG + chr2.1:5598560-5598579 None:intergenic 20.0%
!!! AATTTTGTGGATTACAAAAA+TGG - chr2.1:5601520-5601539 MS.gene98716:CDS 20.0%
!!! ACATTTGTTTTATTGGTAAA+AGG + chr2.1:5597762-5597781 None:intergenic 20.0%
!!! ACGACTTTGATTTAATTAAA+AGG - chr2.1:5596800-5596819 MS.gene98716:CDS 20.0%
!!! ATATAAAAGGATATTTTGCA+TGG - chr2.1:5601443-5601462 MS.gene98716:CDS 20.0%
!!! ATGTTGAACATTTGTTTTAT+TGG + chr2.1:5597769-5597788 None:intergenic 20.0%
!!! CGACTTTGATTTAATTAAAA+GGG - chr2.1:5596801-5596820 MS.gene98716:CDS 20.0%
!!! GTTACTAACTTTTATTTTGA+AGG + chr2.1:5597621-5597640 None:intergenic 20.0%
!!! TAATTACTTTACTAGTTTTC+AGG + chr2.1:5598561-5598580 None:intergenic 20.0%
!!! TAGATCATTTTTTGGTTATT+AGG + chr2.1:5599697-5599716 None:intergenic 20.0%
!!! TTTTTGAATTCAATTTCAGT+CGG - chr2.1:5596434-5596453 MS.gene98716:intron 20.0%
! AACAATTCTTGAATTCCTTT+AGG + chr2.1:5600948-5600967 None:intergenic 25.0%
! AACTAACAACAAACATTTCA+TGG + chr2.1:5600262-5600281 None:intergenic 25.0%
! AATATCCAACTATATCTAAC+TGG + chr2.1:5599870-5599889 None:intergenic 25.0%
! AATTCAATCCGAAAAATAGA+TGG + chr2.1:5596699-5596718 None:intergenic 25.0%
! AGCATTAATATCATAATCCA+TGG - chr2.1:5599360-5599379 MS.gene98716:intron 25.0%
! AGTGAAACATCAACTTAATT+AGG + chr2.1:5598864-5598883 None:intergenic 25.0%
! ATAAATACATTACCTTGTAG+CGG + chr2.1:5597845-5597864 None:intergenic 25.0%
! ATAGAACAAATCCTTGATTA+AGG + chr2.1:5600070-5600089 None:intergenic 25.0%
! ATGTATAATAGTTTAGTCCA+AGG + chr2.1:5600615-5600634 None:intergenic 25.0%
! ATTCGTAACTCTATTTCATT+GGG - chr2.1:5599113-5599132 MS.gene98716:intron 25.0%
! ATTGTTCAATTCAATTACCT+TGG + chr2.1:5596563-5596582 None:intergenic 25.0%
! CAATTCTATAAGTGTCTATA+AGG + chr2.1:5601240-5601259 None:intergenic 25.0%
! CCAAAAAATGATCTACATAT+AGG - chr2.1:5599702-5599721 MS.gene98716:intron 25.0%
! GAAATGCTTACTTGTAATAT+TGG + chr2.1:5600704-5600723 None:intergenic 25.0%
! GGTAATTGAATTGAACAATT+TGG - chr2.1:5596564-5596583 MS.gene98716:CDS 25.0%
! TAAATACAATGCTAGAAAGA+TGG + chr2.1:5600375-5600394 None:intergenic 25.0%
! TAACAATGATTACAGGTATA+TGG - chr2.1:5600480-5600499 MS.gene98716:intron 25.0%
! TACATATAGGAATCTCAAAA+GGG - chr2.1:5599715-5599734 MS.gene98716:intron 25.0%
! TATGATCAAAATCATGAACA+AGG - chr2.1:5597862-5597881 MS.gene98716:intron 25.0%
! TCAATAGAAGGAAAACTTAA+TGG - chr2.1:5598913-5598932 MS.gene98716:intron 25.0%
! TCATTGAAATAATGAAGTAC+CGG + chr2.1:5596400-5596419 None:intergenic 25.0%
! TGGTTATATGTTTATCCTAA+AGG - chr2.1:5600930-5600949 MS.gene98716:intron 25.0%
! TTAAAGAAGTTAGAACTTAG+TGG - chr2.1:5599912-5599931 MS.gene98716:intron 25.0%
!! ATCAAATTTTATGGAATGAG+AGG - chr2.1:5597459-5597478 MS.gene98716:intron 25.0%
!! CTATCTTATGAAAGGTTTTA+TGG + chr2.1:5598212-5598231 None:intergenic 25.0%
!! TCATTTCTAAAAATAAGCCA+TGG + chr2.1:5599380-5599399 None:intergenic 25.0%
!!! AAATGATTTTCAAGACTATG+CGG - chr2.1:5599394-5599413 MS.gene98716:intron 25.0%
!!! AGTTATAAACTATTTTGGAG+CGG + chr2.1:5600005-5600024 None:intergenic 25.0%
!!! ATAAAGTACCATTTCAGTTT+TGG + chr2.1:5600200-5600219 None:intergenic 25.0%
!!! ATCGCTTTTTATTATGATCT+TGG + chr2.1:5600303-5600322 None:intergenic 25.0%
!!! ATTTGAGAAGCACTATTATA+AGG - chr2.1:5597533-5597552 MS.gene98716:intron 25.0%
!!! CCTATATGTAGATCATTTTT+TGG + chr2.1:5599705-5599724 None:intergenic 25.0%
!!! CTAGTTTTCTATCTTATGAA+AGG + chr2.1:5598220-5598239 None:intergenic 25.0%
!!! GAGAGAACATTTTAATTTGA+CGG - chr2.1:5597414-5597433 MS.gene98716:intron 25.0%
!!! TAAAGTACCATTTCAGTTTT+GGG + chr2.1:5600199-5600218 None:intergenic 25.0%
!!! TAGTATTGTTGCTTTTTGAT+TGG + chr2.1:5599340-5599359 None:intergenic 25.0%
!!! TGATTTCTCCATCTATTTTT+CGG - chr2.1:5596688-5596707 MS.gene98716:intron 25.0%
!!! TTTGAGAAGCACTATTATAA+GGG - chr2.1:5597534-5597553 MS.gene98716:intron 25.0%
AAAATAGTAACCAATTGCAG+GGG + chr2.1:5598629-5598648 None:intergenic 30.0%
AAAATGTGATCTCTTCATCA+AGG - chr2.1:5600116-5600135 MS.gene98716:intron 30.0%
AAAGTTCATGATTGTTTGTG+AGG - chr2.1:5597952-5597971 MS.gene98716:CDS 30.0%
AAATCACTACCGTATACATT+AGG - chr2.1:5598400-5598419 MS.gene98716:intron 30.0%
AAGATATTAGACAGAAGCAA+CGG - chr2.1:5597795-5597814 MS.gene98716:intron 30.0%
ACAAAATAGTAACCAATTGC+AGG + chr2.1:5598631-5598650 None:intergenic 30.0%
AGTGAAGAAACATCAAGAAT+TGG + chr2.1:5596272-5596291 None:intergenic 30.0%
ATACTTCTTCTTGTACACAT+GGG + chr2.1:5599627-5599646 None:intergenic 30.0%
ATAGAAGGAAAACTTAATGG+AGG - chr2.1:5598916-5598935 MS.gene98716:intron 30.0%
CAAAATAGTAACCAATTGCA+GGG + chr2.1:5598630-5598649 None:intergenic 30.0%
CAATGAAATAGAGTTACGAA+TGG + chr2.1:5599114-5599133 None:intergenic 30.0%
CATAAGATAGAAAACTAGCA+GGG - chr2.1:5598222-5598241 MS.gene98716:CDS 30.0%
CATCATGAGGAATATGAATT+TGG - chr2.1:5598757-5598776 MS.gene98716:intron 30.0%
CATTCGTAACTCTATTTCAT+TGG - chr2.1:5599112-5599131 MS.gene98716:intron 30.0%
CTACATATAGGAATCTCAAA+AGG - chr2.1:5599714-5599733 MS.gene98716:intron 30.0%
GAATACCAGTTAGATATAGT+TGG - chr2.1:5599862-5599881 MS.gene98716:intron 30.0%
GAATATAATAGAGATGACGA+TGG + chr2.1:5601270-5601289 None:intergenic 30.0%
GTTATACACTTAAATATCGC+AGG - chr2.1:5598724-5598743 MS.gene98716:intron 30.0%
GTTTCTTGACAATTTCGAAT+GGG - chr2.1:5601468-5601487 MS.gene98716:CDS 30.0%
GTTTGCAATTATATTTGTGC+AGG - chr2.1:5600896-5600915 MS.gene98716:intron 30.0%
TAACACATAGCAGTACTATT+GGG - chr2.1:5598457-5598476 MS.gene98716:intron 30.0%
TAACATAGGTGCATCTAATA+TGG + chr2.1:5597724-5597743 None:intergenic 30.0%
TAATCCAACATTATCACTAG+AGG - chr2.1:5601210-5601229 MS.gene98716:intron 30.0%
TAGATGGTATATCATCACTT+CGG - chr2.1:5598070-5598089 MS.gene98716:intron 30.0%
TATTGGCATTAAAATCAGTG+AGG + chr2.1:5600687-5600706 None:intergenic 30.0%
TCATAAGATAGAAAACTAGC+AGG - chr2.1:5598221-5598240 MS.gene98716:CDS 30.0%
TGATTTCTTCTAGTCAAGAA+AGG - chr2.1:5596990-5597009 MS.gene98716:intron 30.0%
TGTATATGAAGATCCTCATT+AGG - chr2.1:5599281-5599300 MS.gene98716:intron 30.0%
TTGATTTACATCACCGAAAA+TGG - chr2.1:5600999-5601018 MS.gene98716:intron 30.0%
TTTATAAGGGTTTCTTAGAG+TGG - chr2.1:5601345-5601364 MS.gene98716:intron 30.0%
TTTCAAAGAGTTTGGAGATA+GGG - chr2.1:5599424-5599443 MS.gene98716:intron 30.0%
! AATACATAACTAGCCTAATG+AGG + chr2.1:5599297-5599316 None:intergenic 30.0%
! ACCAAGTTTAAGTTAAACCA+AGG - chr2.1:5596543-5596562 MS.gene98716:CDS 30.0%
! ACCTTGGTTTAACTTAAACT+TGG + chr2.1:5596547-5596566 None:intergenic 30.0%
! CATTAGGCTAGTTATGTATT+TGG - chr2.1:5599297-5599316 MS.gene98716:intron 30.0%
! CGTTTAAGTTTAACTCACTT+GGG + chr2.1:5598820-5598839 None:intergenic 30.0%
! GAACTTTGTTTCAAAGAGTT+TGG - chr2.1:5599416-5599435 MS.gene98716:intron 30.0%
! TAAAGCGTGTTTACCATTTT+CGG + chr2.1:5601015-5601034 None:intergenic 30.0%
! TCGTTTAAGTTTAACTCACT+TGG + chr2.1:5598821-5598840 None:intergenic 30.0%
! TGGTTTAACTTAAACTTGGT+GGG + chr2.1:5596543-5596562 None:intergenic 30.0%
! TTGGTTTAACTTAAACTTGG+TGG + chr2.1:5596544-5596563 None:intergenic 30.0%
! TTTCCCACAAACTTCATTTT+TGG - chr2.1:5596305-5596324 MS.gene98716:CDS 30.0%
! TTTGAGGTTCCTAATGTATA+CGG + chr2.1:5598412-5598431 None:intergenic 30.0%
! TTTTCGGTGATGTAAATCAA+AGG + chr2.1:5600999-5601018 None:intergenic 30.0%
!! AAAGTACCATTTCAGTTTTG+GGG + chr2.1:5600198-5600217 None:intergenic 30.0%
!! AGAAAGGACTGTTTTTCTTT+TGG - chr2.1:5597006-5597025 MS.gene98716:intron 30.0%
!! GAAAGGACTGTTTTTCTTTT+GGG - chr2.1:5597007-5597026 MS.gene98716:intron 30.0%
!! TACAAGGTATCGTATATAAG+CGG - chr2.1:5598362-5598381 MS.gene98716:CDS 30.0%
!! TAGAAAGAGTACCTTAATCA+AGG - chr2.1:5600056-5600075 MS.gene98716:intron 30.0%
!! TGAAGAGATCACATTTTGAT+AGG + chr2.1:5600113-5600132 None:intergenic 30.0%
!! TTCCCACAAACTTCATTTTT+GGG - chr2.1:5596306-5596325 MS.gene98716:CDS 30.0%
AAGCAAGCAAGACTACTTAA+AGG - chr2.1:5600577-5600596 MS.gene98716:intron 35.0%
AATATTGATGTGTGTAGCAC+TGG - chr2.1:5597330-5597349 MS.gene98716:intron 35.0%
AATTCAATATCCCCTGCAAT+TGG - chr2.1:5598616-5598635 MS.gene98716:CDS 35.0%
ACAATGCTAGAAAGATGGAT+TGG + chr2.1:5600370-5600389 None:intergenic 35.0%
AGATGGAGAAATCATATACC+TGG + chr2.1:5596682-5596701 None:intergenic 35.0%
AGCAAGCAAGACTACTTAAA+GGG - chr2.1:5600578-5600597 MS.gene98716:intron 35.0%
AGTCTACCATTTCTTAGTTG+TGG + chr2.1:5600658-5600677 None:intergenic 35.0%
AGTGCTACACACATCAATAT+TGG + chr2.1:5597331-5597350 None:intergenic 35.0%
ATATGGAACCACTAACAAGA+GGG - chr2.1:5600497-5600516 MS.gene98716:intron 35.0%
ATTTCTTAGTTGTGGTGCAT+CGG + chr2.1:5600650-5600669 None:intergenic 35.0%
CAACCTTATCAATGAGTTGT+TGG - chr2.1:5598969-5598988 MS.gene98716:CDS 35.0%
CAATAGTACTGCTATGTGTT+AGG + chr2.1:5598458-5598477 None:intergenic 35.0%
CGTTTCTTGACAATTTCGAA+TGG - chr2.1:5601467-5601486 MS.gene98716:CDS 35.0%
CTAACACATAGCAGTACTAT+TGG - chr2.1:5598456-5598475 MS.gene98716:intron 35.0%
CTTACAGATTCTCGATATCT+TGG - chr2.1:5598783-5598802 MS.gene98716:intron 35.0%
GATACTTCTTCTTGTACACA+TGG + chr2.1:5599628-5599647 None:intergenic 35.0%
GTATCACTTACACAATGAGA+GGG + chr2.1:5599182-5599201 None:intergenic 35.0%
GTCCCAAAAATGAAGTTTGT+GGG + chr2.1:5596311-5596330 None:intergenic 35.0%
GTTTCAAAGAGTTTGGAGAT+AGG - chr2.1:5599423-5599442 MS.gene98716:intron 35.0%
TAAAATGTTCTCTCAGAGAG+AGG + chr2.1:5597408-5597427 None:intergenic 35.0%
TAAATATCGCAGGAAGATGT+TGG - chr2.1:5598734-5598753 MS.gene98716:intron 35.0%
TAGCCAACAACTCATTGATA+AGG + chr2.1:5598975-5598994 None:intergenic 35.0%
TATATGGAACCACTAACAAG+AGG - chr2.1:5600496-5600515 MS.gene98716:intron 35.0%
TCACAGTTCACATTTCAAGA+AGG + chr2.1:5597575-5597594 None:intergenic 35.0%
TGATCAATATTACCGCTACA+AGG - chr2.1:5597830-5597849 MS.gene98716:intron 35.0%
TGTAATATTTGACTCCTTCG+TGG + chr2.1:5598948-5598967 None:intergenic 35.0%
TGTATCACTTACACAATGAG+AGG + chr2.1:5599183-5599202 None:intergenic 35.0%
TGTCCCAAAAATGAAGTTTG+TGG + chr2.1:5596312-5596331 None:intergenic 35.0%
TGTCTTCAGTCTAGCAATAT+AGG + chr2.1:5598003-5598022 None:intergenic 35.0%
TTAAGTTTAACTCACTTGGG+AGG + chr2.1:5598817-5598836 None:intergenic 35.0%
TTATAGAAAATATGGCCGAC+CGG - chr2.1:5596378-5596397 MS.gene98716:intron 35.0%
TTGTATGTGTGGGTATTAGA+TGG - chr2.1:5598054-5598073 MS.gene98716:intron 35.0%
! AAAGGGTCATTTGATTTCCT+TGG - chr2.1:5600595-5600614 MS.gene98716:intron 35.0%
! AGGAAGGGCGTAAATATAAA+AGG - chr2.1:5601430-5601449 MS.gene98716:intron 35.0%
! ATATTTTACCTGGTATGCTG+AGG + chr2.1:5596339-5596358 None:intergenic 35.0%
! ATCAATGAGTTGTTGGCTAA+TGG - chr2.1:5598976-5598995 MS.gene98716:CDS 35.0%
! TCGACTTTGTTATCAGAAAG+TGG + chr2.1:5599778-5599797 None:intergenic 35.0%
! TGGTGATGTGAAACAATGTA+AGG + chr2.1:5599581-5599600 None:intergenic 35.0%
! TGTTAGGTGAGTGTGTTTTT+GGG + chr2.1:5598442-5598461 None:intergenic 35.0%
!! CACACATCAATATTGGTTTG+TGG + chr2.1:5597324-5597343 None:intergenic 35.0%
!! CATTTTGATAGGAGTAAGAG+TGG + chr2.1:5600102-5600121 None:intergenic 35.0%
!! TGAAATAATGAAGTACCGGT+CGG + chr2.1:5596396-5596415 None:intergenic 35.0%
!! TGTGTACAAGAAGAAGTATC+AGG - chr2.1:5599628-5599647 MS.gene98716:intron 35.0%
!!! AGATGGATTGGTTTTGGAAT+TGG + chr2.1:5600358-5600377 None:intergenic 35.0%
!!! CTAGAAAGATGGATTGGTTT+TGG + chr2.1:5600364-5600383 None:intergenic 35.0%
AATGAACCAACTAGTCACCA+AGG + chr2.1:5599755-5599774 None:intergenic 40.0%
ACAAGAGAACGCATACTTTG+TGG + chr2.1:5600529-5600548 None:intergenic 40.0%
ACCAAAAGTTGTCTGCAAAG+TGG - chr2.1:5601554-5601573 MS.gene98716:CDS 40.0%
ACCTACACTCATAAGTATCC+AGG - chr2.1:5596661-5596680 MS.gene98716:intron 40.0%
ACCTGGATACTTATGAGTGT+AGG + chr2.1:5596665-5596684 None:intergenic 40.0%
AGCGTTTCTTCCTATGCATT+AGG - chr2.1:5599485-5599504 MS.gene98716:intron 40.0%
ATAGGAAGAAACGCTGAAAG+TGG + chr2.1:5599480-5599499 None:intergenic 40.0%
ATCAAAAAGCTGCTGAACGA+GGG - chr2.1:5599797-5599816 MS.gene98716:intron 40.0%
ATGGTATTCCAATAGGTCCA+AGG - chr2.1:5600811-5600830 MS.gene98716:intron 40.0%
CAAAGTATGCGTTCTCTTGT+TGG - chr2.1:5600529-5600548 MS.gene98716:intron 40.0%
CACCTCATAGTTGTATGTGT+GGG - chr2.1:5598044-5598063 MS.gene98716:intron 40.0%
CAGTCTAGCAATATAGGCAT+TGG + chr2.1:5597997-5598016 None:intergenic 40.0%
CGCTATGTTATTCTGCTCAA+TGG - chr2.1:5597367-5597386 MS.gene98716:intron 40.0%
CTAGACTGAAGACATTCATC+CGG - chr2.1:5598009-5598028 MS.gene98716:CDS 40.0%
GATGCACCACAACTAAGAAA+TGG - chr2.1:5600649-5600668 MS.gene98716:intron 40.0%
GCGTTTCTTCCTATGCATTA+GGG - chr2.1:5599486-5599505 MS.gene98716:intron 40.0%
GGATATTTCCCTCTTGTTAG+TGG + chr2.1:5600508-5600527 None:intergenic 40.0%
GTAAGTGCTTAACTCTACAC+TGG - chr2.1:5599840-5599859 MS.gene98716:intron 40.0%
TACCCACACATACAACTATG+AGG + chr2.1:5598049-5598068 None:intergenic 40.0%
TAGACTGAAGACATTCATCC+GGG - chr2.1:5598010-5598029 MS.gene98716:CDS 40.0%
TATATAAGCGGTACACCCAA+AGG - chr2.1:5598374-5598393 MS.gene98716:intron 40.0%
TGGTATTCCAATAGGTCCAA+GGG - chr2.1:5600812-5600831 MS.gene98716:intron 40.0%
TGTTATGGTATACGTACCCT+TGG + chr2.1:5600831-5600850 None:intergenic 40.0%
TTGGAGATAGGGTGAAGTAT+TGG - chr2.1:5599435-5599454 MS.gene98716:intron 40.0%
! AACCATTTAGAACATCGACC+AGG + chr2.1:5599521-5599540 None:intergenic 40.0%
! AATGGAGGTATAAACCACGA+AGG - chr2.1:5598931-5598950 MS.gene98716:intron 40.0%
! ACCACTTTGCAGACAACTTT+TGG + chr2.1:5601558-5601577 None:intergenic 40.0%
! ACCATTTAGAACATCGACCA+GGG + chr2.1:5599520-5599539 None:intergenic 40.0%
! ACGGTAGTGATTTTCACCTT+TGG + chr2.1:5598393-5598412 None:intergenic 40.0%
! CGGTAGTGATTTTCACCTTT+GGG + chr2.1:5598392-5598411 None:intergenic 40.0%
! GAATCTCAAAAGGGTGTGAT+AGG - chr2.1:5599724-5599743 MS.gene98716:intron 40.0%
! GCTTCCTCTAGTGATAATGT+TGG + chr2.1:5601217-5601236 None:intergenic 40.0%
! GTGTTAGGTGAGTGTGTTTT+TGG + chr2.1:5598443-5598462 None:intergenic 40.0%
!! GCGATTTGGCATGAATTTTG+TGG - chr2.1:5601507-5601526 MS.gene98716:CDS 40.0%
!!! ACTTTACTAGTTTTCAGGGC+CGG + chr2.1:5598556-5598575 None:intergenic 40.0%
!!! GCTTGCTTTTTAGAGAACTC+TGG + chr2.1:5600565-5600584 None:intergenic 40.0%
!!! TTTTTTTTAGGCCCATGCCT+TGG - chr2.1:5598490-5598509 MS.gene98716:intron 40.0%
AGGAAGATGTTGGCATCATG+AGG - chr2.1:5598744-5598763 MS.gene98716:intron 45.0%
ATACGTACCCTTGGACCTAT+TGG + chr2.1:5600822-5600841 None:intergenic 45.0%
CACATACAACTATGAGGTGC+TGG + chr2.1:5598043-5598062 None:intergenic 45.0%
CAGGGACGTTCCTACTAATT+CGG - chr2.1:5598240-5598259 MS.gene98716:CDS 45.0%
CTCCTTGGATTTGCACCTAA+CGG - chr2.1:5600168-5600187 MS.gene98716:intron 45.0%
GAAGAAACGCTGAAAGTGGA+TGG + chr2.1:5599476-5599495 None:intergenic 45.0%
GACAATTTCGAATGGGCATC+CGG - chr2.1:5601475-5601494 MS.gene98716:CDS 45.0%
GAGCGCAATGGTATTCCAAT+AGG - chr2.1:5600804-5600823 MS.gene98716:intron 45.0%
GATCAAAAAGCTGCTGAACG+AGG - chr2.1:5599796-5599815 MS.gene98716:intron 45.0%
GCACCTCATAGTTGTATGTG+TGG - chr2.1:5598043-5598062 MS.gene98716:intron 45.0%
GCCAAATCGCATTGCATAAC+CGG + chr2.1:5601497-5601516 None:intergenic 45.0%
GGCTAGACTTCATGTTTGGA+TGG - chr2.1:5599818-5599837 MS.gene98716:intron 45.0%
GGGAAAGATCCCTAATGCAT+AGG + chr2.1:5599498-5599517 None:intergenic 45.0%
GGTAGACCCCAAAACTGAAA+TGG - chr2.1:5600189-5600208 MS.gene98716:intron 45.0%
TACCGTTAGGTGCAAATCCA+AGG + chr2.1:5600173-5600192 None:intergenic 45.0%
TCCGGTTATGCAATGCGATT+TGG - chr2.1:5601493-5601512 MS.gene98716:CDS 45.0%
TGGGAGAGGAGCAAGTATAT+GGG - chr2.1:5596636-5596655 MS.gene98716:intron 45.0%
TGGTTGAGCTCAAATTGCAC+TGG - chr2.1:5599536-5599555 MS.gene98716:intron 45.0%
TTCCTACTAATTCGGAGGCT+CGG - chr2.1:5598248-5598267 MS.gene98716:CDS 45.0%
TTGAGCTCAAATTGCACTGG+TGG - chr2.1:5599539-5599558 MS.gene98716:intron 45.0%
! AATTGCACTGGTGGTGATTC+AGG - chr2.1:5599548-5599567 MS.gene98716:intron 45.0%
! ATTGCACTGGTGGTGATTCA+GGG - chr2.1:5599549-5599568 MS.gene98716:intron 45.0%
! CATTTAGAACATCGACCAGG+GGG + chr2.1:5599518-5599537 None:intergenic 45.0%
! CCATTTAGAACATCGACCAG+GGG + chr2.1:5599519-5599538 None:intergenic 45.0%
! GCATAACCTTGGTGACTAGT+TGG - chr2.1:5599746-5599765 MS.gene98716:intron 45.0%
! GTCGATTTCGTATCATCCAC+TGG + chr2.1:5598137-5598156 None:intergenic 45.0%
!! AAGGTGCTGCAAAAGAAGGT+GGG - chr2.1:5596617-5596636 MS.gene98716:intron 45.0%
!! AGCAATATAGGCATTGGCGT+TGG + chr2.1:5597991-5598010 None:intergenic 45.0%
!! CAAGCTTTAGAGGACGAGTA+TGG - chr2.1:5599144-5599163 MS.gene98716:intron 45.0%
!! GTTTTTGGGAGAGTGGTTTG+AGG + chr2.1:5598428-5598447 None:intergenic 45.0%
!! TACGAAGGTGCTGCAAAAGA+AGG - chr2.1:5596613-5596632 MS.gene98716:intron 45.0%
!! TACTCGTCCTCTAAAGCTTG+AGG + chr2.1:5599144-5599163 None:intergenic 45.0%
!!! TGAGTGTGTTTTTGGGAGAG+TGG + chr2.1:5598435-5598454 None:intergenic 45.0%
!! AGTAAAAAATATATTATATT+TGG + chr2.1:5598167-5598186 None:intergenic 5.0%
!!! AATACATTTTTATTTTTTTA+CGG + chr2.1:5598295-5598314 None:intergenic 5.0%
!!! ATCTTTTAAAAAATTTAAAT+AGG + chr2.1:5598339-5598358 None:intergenic 5.0%
!!! GATTTATTTTATTTTTTATT+AGG - chr2.1:5601410-5601429 MS.gene98716:intron 5.0%
AACCGAGCCTCCGAATTAGT+AGG + chr2.1:5598253-5598272 None:intergenic 50.0%
AGGTGCAAATCCAAGGAGGT+CGG + chr2.1:5600166-5600185 None:intergenic 50.0%
CGAGGGCTAGACTTCATGTT+TGG - chr2.1:5599814-5599833 MS.gene98716:intron 50.0%
CGTTAGGTGCAAATCCAAGG+AGG + chr2.1:5600170-5600189 None:intergenic 50.0%
CTTCATCAAGGAGTCACTCC+TGG - chr2.1:5600128-5600147 MS.gene98716:intron 50.0%
GCAAACCGCTCAATGGAACT+GGG + chr2.1:5598521-5598540 None:intergenic 50.0%
GGACGTTCCTACTAATTCGG+AGG - chr2.1:5598243-5598262 MS.gene98716:CDS 50.0%
GGGTGTGATAGGCATAACCT+TGG - chr2.1:5599735-5599754 MS.gene98716:intron 50.0%
GGTGAAACAACCTCAGCAGA+TGG + chr2.1:5596251-5596270 None:intergenic 50.0%
GTGGGAGAGGAGCAAGTATA+TGG - chr2.1:5596635-5596654 MS.gene98716:intron 50.0%
TGCAAACCGCTCAATGGAAC+TGG + chr2.1:5598522-5598541 None:intergenic 50.0%
TTGTGCAGGCAGCTTCAAGT+TGG - chr2.1:5600910-5600929 MS.gene98716:intron 50.0%
! CCCCTGGTCGATGTTCTAAA+TGG - chr2.1:5599516-5599535 MS.gene98716:intron 50.0%
! GGACCTTCCTCAAGCTTTAG+AGG - chr2.1:5599134-5599153 MS.gene98716:intron 50.0%
!! CGTCCTCTAAAGCTTGAGGA+AGG + chr2.1:5599140-5599159 None:intergenic 50.0%
!! GAAGGTGCTGCAAAAGAAGG+TGG - chr2.1:5596616-5596635 MS.gene98716:intron 50.0%
!! GCTTTAGAGGACGAGTATGG+CGG - chr2.1:5599147-5599166 MS.gene98716:intron 50.0%
!! TGAGGTGCTGGATTCAAACC+CGG + chr2.1:5598031-5598050 None:intergenic 50.0%
!!! CAGTTTTGGGGTCTACCGTT+AGG + chr2.1:5600186-5600205 None:intergenic 50.0%
AATGGAACTGGGCCTCTCCA+AGG + chr2.1:5598510-5598529 None:intergenic 55.0%
AGAGGCCCAGTTCCATTGAG+CGG - chr2.1:5598513-5598532 MS.gene98716:intron 55.0%
ATCCAAGGAGGTCGGCAACA+TGG + chr2.1:5600158-5600177 None:intergenic 55.0%
CAGAAGCAACGGAGATGTCG+CGG - chr2.1:5597806-5597825 MS.gene98716:intron 55.0%
CTGCGGCATGAGCGAGTAAT+TGG + chr2.1:5599601-5599620 None:intergenic 55.0%
CTTGTACACATGGGCAGCTG+CGG + chr2.1:5599618-5599637 None:intergenic 55.0%
GACAGCATCCTCAGCATACC+AGG - chr2.1:5596328-5596347 MS.gene98716:CDS 55.0%
GCATTAGGGATCTTTCCCCC+TGG - chr2.1:5599500-5599519 MS.gene98716:intron 55.0%
GCTGCAAAAGAAGGTGGGAG+AGG - chr2.1:5596622-5596641 MS.gene98716:intron 55.0%
TCCAAGGAGGTCGGCAACAT+GGG + chr2.1:5600157-5600176 None:intergenic 55.0%
TTTAGGCCCATGCCTTGGAG+AGG - chr2.1:5598495-5598514 MS.gene98716:intron 55.0%
! AACCTCAGCAGATGGTAGCG+TGG + chr2.1:5596243-5596262 None:intergenic 55.0%
! ATTCGGAGGCTCGGTTCTGT+AGG - chr2.1:5598257-5598276 MS.gene98716:CDS 55.0%
! GTGATGGAAGCTGAGCGCAA+TGG - chr2.1:5600792-5600811 MS.gene98716:intron 55.0%
!! AGTTTTCAGGGCCGGACCTT+GGG + chr2.1:5598548-5598567 None:intergenic 55.0%
!! TAGTTTTCAGGGCCGGACCT+TGG + chr2.1:5598549-5598568 None:intergenic 55.0%
AACTGGGCCTCTCCAAGGCA+TGG + chr2.1:5598505-5598524 None:intergenic 60.0%
ACTGGGCCTCTCCAAGGCAT+GGG + chr2.1:5598504-5598523 None:intergenic 60.0%
CACCACGCTACCATCTGCTG+AGG - chr2.1:5596238-5596257 MS.gene98716:CDS 60.0%
GGGGTGTGCAAACCGCTCAA+TGG + chr2.1:5598528-5598547 None:intergenic 60.0%
GGTCGGCAACATGGGAAACC+AGG + chr2.1:5600149-5600168 None:intergenic 60.0%
GGTTTGCACACCCCAAGGTC+CGG - chr2.1:5598534-5598553 MS.gene98716:intron 60.0%
TCCCATGTTGCCGACCTCCT+TGG - chr2.1:5600153-5600172 MS.gene98716:intron 60.0%
TGAGCGGTTTGCACACCCCA+AGG - chr2.1:5598529-5598548 MS.gene98716:intron 60.0%
!! GTTTTCAGGGCCGGACCTTG+GGG + chr2.1:5598547-5598566 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 5596179 5601603 5596179 ID=MS.gene98716
chr2.1 mRNA 5596179 5601603 5596179 ID=MS.gene98716.t1;Parent=MS.gene98716
chr2.1 exon 5601433 5601603 5601433 ID=MS.gene98716.t1.exon1;Parent=MS.gene98716.t1
chr2.1 CDS 5601433 5601603 5601433 ID=cds.MS.gene98716.t1;Parent=MS.gene98716.t1
chr2.1 exon 5601100 5601169 5601100 ID=MS.gene98716.t1.exon2;Parent=MS.gene98716.t1
chr2.1 CDS 5601100 5601169 5601100 ID=cds.MS.gene98716.t1;Parent=MS.gene98716.t1
chr2.1 exon 5599931 5599989 5599931 ID=MS.gene98716.t1.exon3;Parent=MS.gene98716.t1
chr2.1 CDS 5599931 5599989 5599931 ID=cds.MS.gene98716.t1;Parent=MS.gene98716.t1
chr2.1 exon 5598961 5599036 5598961 ID=MS.gene98716.t1.exon4;Parent=MS.gene98716.t1
chr2.1 CDS 5598961 5599036 5598961 ID=cds.MS.gene98716.t1;Parent=MS.gene98716.t1
chr2.1 exon 5598785 5598862 5598785 ID=MS.gene98716.t1.exon5;Parent=MS.gene98716.t1
chr2.1 CDS 5598785 5598862 5598785 ID=cds.MS.gene98716.t1;Parent=MS.gene98716.t1
chr2.1 exon 5598592 5598679 5598592 ID=MS.gene98716.t1.exon6;Parent=MS.gene98716.t1
chr2.1 CDS 5598592 5598679 5598592 ID=cds.MS.gene98716.t1;Parent=MS.gene98716.t1
chr2.1 exon 5598133 5598388 5598133 ID=MS.gene98716.t1.exon7;Parent=MS.gene98716.t1
chr2.1 CDS 5598133 5598388 5598133 ID=cds.MS.gene98716.t1;Parent=MS.gene98716.t1
chr2.1 exon 5597943 5598058 5597943 ID=MS.gene98716.t1.exon8;Parent=MS.gene98716.t1
chr2.1 CDS 5597943 5598058 5597943 ID=cds.MS.gene98716.t1;Parent=MS.gene98716.t1
chr2.1 exon 5597070 5597287 5597070 ID=MS.gene98716.t1.exon9;Parent=MS.gene98716.t1
chr2.1 CDS 5597070 5597287 5597070 ID=cds.MS.gene98716.t1;Parent=MS.gene98716.t1
chr2.1 exon 5596949 5596980 5596949 ID=MS.gene98716.t1.exon10;Parent=MS.gene98716.t1
chr2.1 CDS 5596949 5596980 5596949 ID=cds.MS.gene98716.t1;Parent=MS.gene98716.t1
chr2.1 exon 5596762 5596864 5596762 ID=MS.gene98716.t1.exon11;Parent=MS.gene98716.t1
chr2.1 CDS 5596762 5596864 5596762 ID=cds.MS.gene98716.t1;Parent=MS.gene98716.t1
chr2.1 exon 5596480 5596588 5596480 ID=MS.gene98716.t1.exon12;Parent=MS.gene98716.t1
chr2.1 CDS 5596480 5596588 5596480 ID=cds.MS.gene98716.t1;Parent=MS.gene98716.t1
chr2.1 exon 5596179 5596350 5596179 ID=MS.gene98716.t1.exon13;Parent=MS.gene98716.t1
chr2.1 CDS 5596179 5596350 5596179 ID=cds.MS.gene98716.t1;Parent=MS.gene98716.t1
Gene Sequence

>MS.gene98716

ATGGCTCTGAATATGAAATCATTCAGAGTCTTTTTAATTCTCACTCTCTTCAATCTCTTCACCACGCTACCATCTGCTGAGGTTGTTTCACCAATTCTTGATGTTTCTTCACTTAATCGAACTAGTTTTCCCACAAACTTCATTTTTGGGACAGCATCCTCAGCATACCAGGTAAAATATTATTATTTTTAATATTACGTTATAGAAAATATGGCCGACCGGTACTTCATTATTTCAATGAGACCTTCTTACATATTTTTGAATTCAATTTCAGTCGGACCAAAATGTAGTTTTTAATTTATGAGCATTGATTTAAAAATAATAATAATAATGGTTTAAAGTTTTATAAAATATTGAAAGTCCCACCAAGTTTAAGTTAAACCAAGGTAATTGAATTGAACAATTTGGTTGATGTCATGATATATATCATATAGTACGAAGGTGCTGCAAAAGAAGGTGGGAGAGGAGCAAGTATATGGGACACCTACACTCATAAGTATCCAGGTATATGATTTCTCCATCTATTTTTCGGATTGAATTCAAGATGCATGTAAAATGTAAAATTAATTTTGATTTAGTAACAACTCAATGTTTTTTTTATTCTATATCAAGATTGATTTTACGACTTTGATTTAATTAAAAGGGATGAAGAGTACTTTTATGATGAGTTGAAAATTTTAAAATATGTTTAAGTTTTACACTTTTTCTCTAAAATAAATATGTCCTACGACCATAAATAATATTAAATATTTTAATGGTTGCTTTTTTATGCAAAAAGATAATTTAAACAAGGTTAGTCAAACAAGACACTTGATTTCTTCTAGTCAAGAAAGGACTGTTTTTCTTTTGGGTGAAATTCTTATATTTATTTATATGCAAAAGAACAAAACTCTTCTATATTTCCAAAAAAAAAAAAAAATACTCTTCTATTTTCTTTATTATTATTATTATTATTATTATTATTATTATTATTATTGTTTTGCTATTGGTTTATATACTAATTACAACAGAATTTATTTTAAAAGAATTAATCAACAAAATTTAAATAAAAAAAAAAACATATCTATGATAAAAACAGCTTAAATAGAACAAATAATTTACTATTGTGTTTGATGTTTTGTTATTATTTACAAACACGTTCACCACAAACCAATATTGATGTGTGTAGCACTGGTAATAAAAAAAATACGCTATGTTATTCTGCTCAATGGTGCAATATGAGTTTGCCTCTCTCTGAGAGAACATTTTAATTTGACGGTATTATGTTGTGAAAGTTGCAAATCAAATTTTATGGAATGAGAGGCCGAAAGTCATAACTTAATTATATTTGAGAAGTATTTTATAAAAGAAATAGATTTGAGAAGCACTATTATAAGGGACAATCTGATATGAACCTTCTTGAAATGTGAACTGTGAATTTAATAAATTTTGCAAAAATTCCTTCAAAATAAAAGTTAGTAACATATTACGATTATTCTAAATTTTTATTAACATAAAATTAGTTTTTACTATATACACCTCTATTATTATAATTTATCTGTTCCATATTAGATGCACCTATGTTATAATTCTATTTTTAGCCTTTTACCAATAAAACAAATGTTCAACATGCAGAAAAGATATTAGACAGAAGCAACGGAGATGTCGCGGTTGATCAATATTACCGCTACAAGGTAATGTATTTATGATCAAAATCATGAACAAGGACCCCTATAATATTAAGAATGATGAATAATGTTGAAAATTGTGAATAGTTTAAGAGATTATCAATTTAAAGTTCATGATTGTTTGTGAGGTCTAGCTCAAATGCCAACGCCAATGCCTATATTGCTAGACTGAAGACATTCATCCGGGTTTGAATCCAGCACCTCATAGTTGTATGTGTGGGTATTAGATGGTATATCATCACTTCGGCTACGAACTATAAAAAATAATAGTCAATATTGTTAAAAAATCCAGTGGATGATACGAAATCGACTAAAATACCAAATATAATATATTTTTTACTTACTTAATGAGAATTAATTAATCCATAAAACCTTTCATAAGATAGAAAACTAGCAGGGACGTTCCTACTAATTCGGAGGCTCGGTTCTGTAGGTGAAAAAGAGACCCGTAAAAAAATAAAAATGTATTTCTTTTAAAGACTAATGATGTCCTATTTAAATTTTTTAAAAGATAAATACAAGGTATCGTATATAAGCGGTACACCCAAAGGTGAAAATCACTACCGTATACATTAGGAACCTCAAACCACTCTCCCAAAAACACACTCACCTAACACATAGCAGTACTATTGGGCTATAATTTTTTTTTTTTAGGCCCATGCCTTGGAGAGGCCCAGTTCCATTGAGCGGTTTGCACACCCCAAGGTCCGGCCCTGAAAACTAGTAAAGTAATTATTATAAAGATAATGAGATTCAATGGAGAAAAATCAAATTCAATATCCCCTGCAATTGGTTACTATTTTGTATTATATTATCTATTTTGTTTTGTAGAATAAAATGAAAGTATGTTGTTTCAAAAAAAAATATGGAACTAGTACGTTATACACTTAAATATCGCAGGAAGATGTTGGCATCATGAGGAATATGAATTTGGATGCTTACAGATTCTCGATATCTTGGTCTAGAATCCTCCCAAGTGAGTTAAACTTAAACGACTAACTCCTAGTTTATTTTACCTAATTAAGTTGATGTTTCACTTTTTTTTTTCATTCAATTTTATTAAACTATCAATAGAAGGAAAACTTAATGGAGGTATAAACCACGAAGGAGTCAAATATTACAACAACCTTATCAATGAGTTGTTGGCTAATGGTTAGTCCATACTTAGTTTACTTGAATTTTTATTAAACTACTACACATGTTAACATTTCAAACAACATTAAATGTAAACAAAGGTATTTGAATATTTATTTATAGGTCTACAGCCATTCGTAACTCTATTTCATTGGGACCTTCCTCAAGCTTTAGAGGACGAGTATGGCGGCTTCTTAAGCCCTCTCATTGTGTAAGTGATACAAAATTACCTAGATCATATTTACATAAATATTAGTAAGGTGTTAATTCATTTTTTCATGTTATTTATCTATAATAGCTTTGTATATGAAGATCCTCATTAGGCTAGTTATGTATTTGGAACAAATTGTATGTTAACCAATCAAAAAGCAACAATACTAAGCATTAATATCATAATCCATGGCTTATTTTTAGAAATGATTTTCAAGACTATGCGGAACTTTGTTTCAAAGAGTTTGGAGATAGGGTGAAGTATTGGATCACTTTCAATGAGCCATCCACTTTCAGCGTTTCTTCCTATGCATTAGGGATCTTTCCCCCTGGTCGATGTTCTAAATGGTTGAGCTCAAATTGCACTGGTGGTGATTCAGGGAAAGAGCCTTACATTGTTTCACATCACCAATTACTCGCTCATGCCGCAGCTGCCCATGTGTACAAGAAGAAGTATCAGGTTTGTTATAACTTAGATAAGAACTTAATTTAAAGTTCAAGATACCTAATAACCAAAAAATGATCTACATATAGGAATCTCAAAAGGGTGTGATAGGCATAACCTTGGTGACTAGTTGGTTCATTCCACTTTCTGATAACAAAGTCGATCAAAAAGCTGCTGAACGAGGGCTAGACTTCATGTTTGGATGGTAAGTGCTTAACTCTACACTGGAATACCAGTTAGATATAGTTGGATATTAATTAGAAATAGTTTTTTTTTTTTAAAGAAGTTAGAACTTAGTGGTGATTAGTTGTTTTTTTATAAGCAAATATGTATTGATCATGAGTAAACTAGCACACGATGTGCAAATCCGCTCCAAAATAGTTTATAACTATATGCATACTTAAATTGTTGTTTTTGAAATTAGAAAGAGTACCTTAATCAAGGATTTGTTCTATTTATGAGCACCACTCTTACTCCTATCAAAATGTGATCTCTTCATCAAGGAGTCACTCCTGGTTTCCCATGTTGCCGACCTCCTTGGATTTGCACCTAACGGTAGACCCCAAAACTGAAATGGTACTTTATCATATATATAGGTGCAAAACAAGAAGTTTGAAGCAGCTTCCATGAAATGTTTGTTGTTAGTTAGTTATATATTAGTTACTCCAAGATCATAATAAAAAGCGATCATTTGTACATTCATTTGAAATCATCATAATACCAATTCCAAAACCAATCCATCTTTCTAGCATTGTATTTATCTCTATAATTAGTTGGGCTATATTGTATAGTACTTCTCAACAATAGTGATTGTTCGTGAGATTGTTTTTATTTTTTTCTATTTGTAACAATGATTACAGGTATATGGAACCACTAACAAGAGGGAAATATCCACAAAGTATGCGTTCTCTTGTTGGAAAACGATTGCCAGAGTTCTCTAAAAAGCAAGCAAGACTACTTAAAGGGTCATTTGATTTCCTTGGACTAAACTATTATACATCTGTCTATGCTGCCGATGCACCACAACTAAGAAATGGTAGACTCAATTACCTCACTGATTTTAATGCCAATATTACAAGTAAGCATTTCCTTATTTATTGATCATTCTGTAAATTAATGAATATTTTTAAATTTGATGATAATTTTTTTTTTTTTTTGTGATGGAAGCTGAGCGCAATGGTATTCCAATAGGTCCAAGGGTACGTATACCATAACATATTATAACTTTGTAATTTTTTAAGTGTATATATATTTAGGTTATGTTTGCAATTATATTTGTGCAGGCAGCTTCAAGTTGGTTATATGTTTATCCTAAAGGAATTCAAGAATTGTTACTCTATGTCAAGAAAGTGTACAACAATCCTTTGATTTACATCACCGAAAATGGTAAACACGCTTTAATTCATATTGTTTATTCTGAATATTGTTATATAAAGTAAATGTGAGATAGAATACATAACATTTTTTTATAAAAGTTGACGTTTATGTCTGAATTTTCTTTAGATATTTTTATCTAACATATATATGATCAGAATCTTTTTTGAAAACTTAATTTTTAGGTATTGATGAGTTCAATAATCCAACATTATCACTAGAGGAAGCCCTTATAGACACTTATAGAATTGATTATTTCCATCGTCATCTCTATTATATTCGATCTGTCATCAAGTAAGTGAACAATATTTATATATTTAATTTTTGAGATTAGTTTTTATAAGGGTTTCTTAGAGTGGCTATATATTATATATTTAAAGTATAGTTGTTTTCTCATACATGATTTATTTTATTTTTTATTAGGAAGGGCGTAAATATAAAAGGATATTTTGCATGGTCGTTTCTTGACAATTTCGAATGGGCATCCGGTTATGCAATGCGATTTGGCATGAATTTTGTGGATTACAAAAATGGTTTGAAAAGACACCAAAAGTTGTCTGCAAAGTGGTTTACTAATTTTCTCAAAAGATATTAA
Protein sequence

>MS.gene98716.t1

MALNMKSFRVFLILTLFNLFTTLPSAEVVSPILDVSSLNRTSFPTNFIFGTASSAYQYEGAAKEGGRGASIWDTYTHKYPEKILDRSNGDVAVDQYYRYKEDVGIMRNMNLDAYRFSISWSRILPKGKLNGGINHEGVKYYNNLINELLANGLQPFVTLFHWDLPQALEDEYGGFLSPLIVNDFQDYAELCFKEFGDRVKYWITFNEPSTFSVSSYALGIFPPGRCSKWLSSNCTGGDSGKEPYIVSHHQLLAHAAAAHVYKKKYQESQKGVIGITLVTSWFIPLSDNKVDQKAAERGLDFMFGWYMEPLTRGKYPQSMRSLVGKRLPEFSKKQARLLKGSFDFLGLNYYTSVYAADAPQLRNGRLNYLTDFNANITTERNGIPIGPRAASSWLYVYPKGIQELLLYVKKVYNNPLIYITENGIDEFNNPTLSLEEALIDTYRIDYFHRHLYYIRSVIKKGVNIKGYFAWSFLDNFEWASGYAMRFGMNFVDYKNGLKRHQKLSAKWFTNFLKRY