Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99224.t1 | XP_013457425.1 | 84.7 | 1088 | 79 | 3 | 1 | 1010 | 1 | 1079 | 0.00E+00 | 1546.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99224.t1 | Q9SLN1 | 44.1 | 783 | 357 | 14 | 1 | 776 | 1 | 709 | 2.2e-145 | 518.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99224.t1 | A0A072UQ33 | 84.7 | 1088 | 79 | 3 | 1 | 1010 | 1 | 1079 | 0.0e+00 | 1546.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049418 | MS.gene99224 | 0.859334 | 4.45E-63 | -1.69E-46 |
| MS.gene049697 | MS.gene99224 | 0.84026 | 9.68E-58 | -1.69E-46 |
| MS.gene050310 | MS.gene99224 | 0.814964 | 1.18E-51 | -1.69E-46 |
| MS.gene050589 | MS.gene99224 | 0.822518 | 2.27E-53 | -1.69E-46 |
| MS.gene051067 | MS.gene99224 | 0.86062 | 1.82E-63 | -1.69E-46 |
| MS.gene051087 | MS.gene99224 | 0.817963 | 2.51E-52 | -1.69E-46 |
| MS.gene051248 | MS.gene99224 | 0.826919 | 2.08E-54 | -1.69E-46 |
| MS.gene051478 | MS.gene99224 | 0.845869 | 3.10E-59 | -1.69E-46 |
| MS.gene051781 | MS.gene99224 | 0.80212 | 6.52E-49 | -1.69E-46 |
| MS.gene051787 | MS.gene99224 | 0.803633 | 3.18E-49 | -1.69E-46 |
| MS.gene052731 | MS.gene99224 | 0.812297 | 4.55E-51 | -1.69E-46 |
| MS.gene053144 | MS.gene99224 | 0.869065 | 4.09E-66 | -1.69E-46 |
| MS.gene053536 | MS.gene99224 | 0.842578 | 2.37E-58 | -1.69E-46 |
| MS.gene053538 | MS.gene99224 | 0.839349 | 1.67E-57 | -1.69E-46 |
| MS.gene054584 | MS.gene99224 | 0.841452 | 4.71E-58 | -1.69E-46 |
| MS.gene055537 | MS.gene99224 | 0.810614 | 1.06E-50 | -1.69E-46 |
| MS.gene056228 | MS.gene99224 | 0.850051 | 2.18E-60 | -1.69E-46 |
| MS.gene056396 | MS.gene99224 | 0.808836 | 2.55E-50 | -1.69E-46 |
| MS.gene05709 | MS.gene99224 | 0.803032 | 4.23E-49 | -1.69E-46 |
| MS.gene058197 | MS.gene99224 | 0.813185 | 2.91E-51 | -1.69E-46 |
| MS.gene058198 | MS.gene99224 | 0.810884 | 9.23E-51 | -1.69E-46 |
| MS.gene05894 | MS.gene99224 | 0.809226 | 2.10E-50 | -1.69E-46 |
| MS.gene059154 | MS.gene99224 | 0.841243 | 5.35E-58 | -1.69E-46 |
| MS.gene059300 | MS.gene99224 | 0.802349 | 5.85E-49 | -1.69E-46 |
| MS.gene059424 | MS.gene99224 | 0.84105 | 6.01E-58 | -1.69E-46 |
| MS.gene06057 | MS.gene99224 | 0.800483 | 1.41E-48 | -1.69E-46 |
| MS.gene060886 | MS.gene99224 | 0.80262 | 5.15E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99224.t1 | MTR_4g094848 | 84.283 | 1088 | 84 | 8 | 1 | 1010 | 1 | 1079 | 0.0 | 1724 |
| MS.gene99224.t1 | MTR_4g094848 | 83.781 | 968 | 78 | 7 | 121 | 1010 | 1 | 967 | 0.0 | 1519 |
| MS.gene99224.t1 | MTR_5g016830 | 44.288 | 639 | 240 | 12 | 349 | 981 | 231 | 759 | 8.54e-141 | 443 |
| MS.gene99224.t1 | MTR_5g016830 | 63.025 | 238 | 87 | 1 | 1 | 238 | 1 | 237 | 1.29e-83 | 289 |
| MS.gene99224.t1 | MTR_4g085570 | 34.569 | 917 | 499 | 18 | 1 | 902 | 1 | 831 | 9.63e-125 | 400 |
| MS.gene99224.t1 | MTR_4g085570 | 34.569 | 917 | 499 | 18 | 1 | 902 | 1 | 831 | 4.08e-123 | 400 |
| MS.gene99224.t1 | MTR_3g113290 | 36.911 | 531 | 259 | 10 | 1 | 463 | 1 | 523 | 1.65e-77 | 276 |
| MS.gene99224.t1 | MTR_1g024095 | 36.929 | 547 | 282 | 14 | 1 | 494 | 1 | 537 | 6.53e-76 | 269 |
| MS.gene99224.t1 | MTR_1g024095 | 36.929 | 547 | 282 | 14 | 1 | 494 | 1 | 537 | 3.31e-75 | 269 |
| MS.gene99224.t1 | MTR_5g021810 | 34.585 | 506 | 255 | 10 | 1 | 458 | 1 | 478 | 1.53e-60 | 221 |
| MS.gene99224.t1 | MTR_5g021810 | 34.320 | 507 | 256 | 10 | 1 | 458 | 1 | 479 | 5.05e-60 | 220 |
| MS.gene99224.t1 | MTR_8g094760 | 37.417 | 302 | 129 | 5 | 1 | 271 | 1 | 273 | 3.42e-41 | 162 |
| MS.gene99224.t1 | MTR_8g094760 | 41.379 | 232 | 101 | 3 | 46 | 271 | 59 | 261 | 4.47e-38 | 152 |
| MS.gene99224.t1 | MTR_1g030010 | 36.797 | 231 | 121 | 2 | 41 | 271 | 138 | 343 | 1.43e-31 | 133 |
| MS.gene99224.t1 | MTR_3g096990 | 37.238 | 239 | 117 | 3 | 38 | 271 | 47 | 257 | 9.58e-31 | 129 |
| MS.gene99224.t1 | MTR_3g096990 | 37.190 | 242 | 113 | 5 | 38 | 271 | 47 | 257 | 4.20e-30 | 128 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99224.t1 | AT2G23360 | 39.275 | 1021 | 482 | 24 | 1 | 1008 | 1 | 896 | 0.0 | 556 |
| MS.gene99224.t1 | AT1G19835 | 37.800 | 500 | 257 | 8 | 1 | 457 | 1 | 489 | 1.94e-77 | 274 |
| MS.gene99224.t1 | AT1G19835 | 37.800 | 500 | 257 | 8 | 1 | 457 | 1 | 489 | 1.94e-77 | 274 |
| MS.gene99224.t1 | AT1G19835 | 37.800 | 500 | 257 | 8 | 1 | 457 | 1 | 489 | 1.94e-77 | 274 |
| MS.gene99224.t1 | AT1G19835 | 37.800 | 500 | 257 | 8 | 1 | 457 | 1 | 489 | 1.94e-77 | 274 |
| MS.gene99224.t1 | AT1G19835 | 37.800 | 500 | 257 | 8 | 1 | 457 | 1 | 489 | 1.94e-77 | 274 |
| MS.gene99224.t1 | AT1G19835 | 37.800 | 500 | 257 | 8 | 1 | 457 | 1 | 489 | 1.94e-77 | 274 |
| MS.gene99224.t1 | AT1G47900 | 37.246 | 443 | 252 | 5 | 33 | 457 | 101 | 535 | 2.53e-66 | 243 |
| MS.gene99224.t1 | AT1G47900 | 37.246 | 443 | 252 | 5 | 33 | 457 | 101 | 535 | 2.53e-66 | 243 |
| MS.gene99224.t1 | AT1G47900 | 37.246 | 443 | 252 | 5 | 33 | 457 | 101 | 535 | 2.59e-66 | 243 |
| MS.gene99224.t1 | AT4G36120 | 35.000 | 500 | 274 | 10 | 1 | 454 | 1 | 495 | 5.63e-62 | 229 |
| MS.gene99224.t1 | AT4G36120 | 35.000 | 500 | 274 | 10 | 1 | 454 | 1 | 495 | 5.63e-62 | 229 |
| MS.gene99224.t1 | AT1G77580 | 37.500 | 232 | 110 | 2 | 39 | 270 | 54 | 250 | 2.98e-33 | 138 |
| MS.gene99224.t1 | AT1G77580 | 37.500 | 232 | 110 | 2 | 39 | 270 | 54 | 250 | 2.98e-33 | 138 |
| MS.gene99224.t1 | AT1G77580 | 37.500 | 232 | 110 | 2 | 39 | 270 | 20 | 216 | 3.02e-33 | 138 |
| MS.gene99224.t1 | AT1G77580 | 39.224 | 232 | 106 | 3 | 39 | 270 | 20 | 216 | 3.38e-33 | 137 |
| MS.gene99224.t1 | AT3G05270 | 31.802 | 283 | 154 | 4 | 1 | 271 | 1 | 256 | 2.73e-31 | 131 |
| MS.gene99224.t1 | AT3G05270 | 31.802 | 283 | 154 | 4 | 1 | 271 | 1 | 256 | 2.73e-31 | 131 |
| MS.gene99224.t1 | AT3G05270 | 31.802 | 283 | 154 | 4 | 1 | 271 | 1 | 256 | 2.73e-31 | 131 |
| MS.gene99224.t1 | AT3G19370 | 30.102 | 392 | 165 | 10 | 155 | 545 | 143 | 426 | 2.93e-31 | 132 |
| MS.gene99224.t1 | AT3G19370 | 30.102 | 392 | 165 | 10 | 155 | 545 | 143 | 426 | 2.93e-31 | 132 |
| MS.gene99224.t1 | AT3G19370 | 30.102 | 392 | 165 | 10 | 155 | 545 | 143 | 426 | 2.93e-31 | 132 |
| MS.gene99224.t1 | AT1G21810 | 37.799 | 209 | 88 | 4 | 62 | 270 | 14 | 180 | 2.72e-25 | 112 |
| MS.gene99224.t1 | AT1G21810 | 37.799 | 209 | 88 | 4 | 62 | 270 | 14 | 180 | 2.72e-25 | 112 |
Find 188 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCGCAATGGCTTGTCTTTC+TGG | 0.087478 | 8.4:-26211311 | None:intergenic |
| TGCTGTTTGGTTCTCTTTAT+TGG | 0.145621 | 8.4:-26210254 | None:intergenic |
| CAAAGTATCGATTCTTCTAT+TGG | 0.248764 | 8.4:-26209442 | None:intergenic |
| CCAATCAAATTGTTTCTTGA+TGG | 0.251020 | 8.4:-26210618 | None:intergenic |
| GTTTGTGGAAGAAGTTATTA+TGG | 0.255118 | 8.4:+26212813 | MS.gene99224:CDS |
| CGAAATGAAGAGAGAGAATT+TGG | 0.270780 | 8.4:+26209174 | MS.gene99224:CDS |
| GTCCTTAACGGATCAACTTT+TGG | 0.276773 | 8.4:+26210904 | MS.gene99224:CDS |
| AGAGGTCGGTCTCAAGGTTT+TGG | 0.284127 | 8.4:+26211066 | MS.gene99224:CDS |
| AATCTCACTTCAAAAGAAAA+TGG | 0.285788 | 8.4:+26208035 | MS.gene99224:CDS |
| CAAATTCTCTCTCTTCATTT+CGG | 0.289408 | 8.4:-26209173 | None:intergenic |
| TTCCACAAACTTCCGCTTCC+CGG | 0.295489 | 8.4:-26212800 | None:intergenic |
| TGTCTTTCTGGTTAATATCA+TGG | 0.309747 | 8.4:-26211299 | None:intergenic |
| CAATCCTTAAAAGAATCTTA+TGG | 0.311961 | 8.4:+26210965 | MS.gene99224:CDS |
| AGCGAAAGTGAAGCAGAGTT+TGG | 0.313969 | 8.4:+26210653 | MS.gene99224:CDS |
| TGATCCTTCAAATAACTCTT+TGG | 0.316192 | 8.4:+26210190 | MS.gene99224:CDS |
| TTGGCATCAATGTCTGATAT+TGG | 0.327469 | 8.4:+26209666 | MS.gene99224:CDS |
| TAACATTCCCAGTTGGCTTC+AGG | 0.333343 | 8.4:+26210016 | MS.gene99224:CDS |
| CATGGATGACTTTGTTGAAA+TGG | 0.341756 | 8.4:+26209818 | MS.gene99224:CDS |
| CCATCAAGAAACAATTTGAT+TGG | 0.345168 | 8.4:+26210618 | MS.gene99224:CDS |
| ATCTTGATGCACAGCATAAA+GGG | 0.347191 | 8.4:+26211032 | MS.gene99224:CDS |
| TAACCTTTGCGAGTTCTCTT+TGG | 0.348817 | 8.4:+26209647 | MS.gene99224:CDS |
| AGTTATCCGTGACAAGTAAA+AGG | 0.351743 | 8.4:+26208953 | MS.gene99224:CDS |
| GTACCCTCAGTAAATAATTC+AGG | 0.357209 | 8.4:+26210392 | MS.gene99224:CDS |
| ATGTCAGAGATTGCGCCTTC+TGG | 0.357476 | 8.4:+26209269 | MS.gene99224:CDS |
| TACTACATCCTGAAGCCAAC+TGG | 0.357862 | 8.4:-26210024 | None:intergenic |
| TTCTGCATTGATTTCAGATT+CGG | 0.358960 | 8.4:+26209725 | MS.gene99224:CDS |
| TCTTGCTGATAAAGAAGAAT+TGG | 0.361994 | 8.4:+26208454 | MS.gene99224:CDS |
| GATCTTGATGCACAGCATAA+AGG | 0.362676 | 8.4:+26211031 | MS.gene99224:CDS |
| CCGCTTCCCGGTTTCTTAGT+AGG | 0.365002 | 8.4:-26212788 | None:intergenic |
| AATCTAGATCCGTGCGTCTT+TGG | 0.365024 | 8.4:+26210134 | MS.gene99224:CDS |
| AAAGCATTACTCTTGAGAAT+TGG | 0.371530 | 8.4:-26209539 | None:intergenic |
| TCCGATCTCACCACCATTCC+AGG | 0.374557 | 8.4:+26212653 | MS.gene99224:CDS |
| AAAGTATCGATTCTTCTATT+GGG | 0.379720 | 8.4:-26209441 | None:intergenic |
| ACTTGTTCCTTCTTATTTCA+AGG | 0.384785 | 8.4:-26209365 | None:intergenic |
| AGTCTCATCACTTGTGCATA+AGG | 0.390608 | 8.4:-26210369 | None:intergenic |
| TCTTCAATTGACAGTTCTCC+TGG | 0.391029 | 8.4:+26209414 | MS.gene99224:CDS |
| TGAAGAAAGAGTAGCCCATT+TGG | 0.391774 | 8.4:+26208804 | MS.gene99224:CDS |
| AGGTCTGGATGAAGCTTTGC+GGG | 0.398196 | 8.4:+26208768 | MS.gene99224:CDS |
| TTCCAAAAGTTGATCCGTTA+AGG | 0.403468 | 8.4:-26210906 | None:intergenic |
| GGAGTCACGGTCACTTACTT+TGG | 0.404277 | 8.4:-26212633 | None:intergenic |
| TCATGGTTTGAGCCCTCCTT+TGG | 0.414165 | 8.4:-26211282 | None:intergenic |
| CATTGTACCTACTAAGAAAC+CGG | 0.419244 | 8.4:+26212781 | MS.gene99224:CDS |
| CTGACATTCTGATTCTAACT+TGG | 0.426526 | 8.4:-26209253 | None:intergenic |
| TGCGCCTTCTGGTTCGGAAA+CGG | 0.432770 | 8.4:+26209280 | MS.gene99224:CDS |
| GAGTTGCAATTCCAGACATC+TGG | 0.435090 | 8.4:-26211140 | None:intergenic |
| CCTCAAGTAACTACTTCAAA+TGG | 0.436735 | 8.4:+26210740 | MS.gene99224:CDS |
| CCTTCAGAGCTCCATCCAAA+TGG | 0.438475 | 8.4:-26208819 | None:intergenic |
| CATCAAGAAACAATTTGATT+GGG | 0.442321 | 8.4:+26210619 | MS.gene99224:CDS |
| GTCACTTACTTTGGAAACCT+TGG | 0.443153 | 8.4:-26212624 | None:intergenic |
| GTCTTCGTGAGCTTGCTGTT+TGG | 0.444123 | 8.4:-26210267 | None:intergenic |
| CAGTGTTACTGCTAATGATT+TGG | 0.444242 | 8.4:+26212733 | MS.gene99224:CDS |
| GACTACCCCTGATCACATTT+CGG | 0.446440 | 8.4:+26209944 | MS.gene99224:CDS |
| TTTGGTTCCGACAAAGTCTC+TGG | 0.446495 | 8.4:+26210152 | MS.gene99224:CDS |
| AAAGAAGTTGATGAGATCAA+TGG | 0.447443 | 8.4:+26209897 | MS.gene99224:CDS |
| AGAGATTGCGCCTTCTGGTT+CGG | 0.447959 | 8.4:+26209274 | MS.gene99224:CDS |
| TCAGGATGTTTCTTGTATGA+AGG | 0.449394 | 8.4:+26210592 | MS.gene99224:CDS |
| GCGAAAGTGAAGCAGAGTTT+GGG | 0.451171 | 8.4:+26210654 | MS.gene99224:CDS |
| AGCAAAAGTTGAAGTGTTGT+CGG | 0.451282 | 8.4:+26208738 | MS.gene99224:CDS |
| GTCAGTAATATTTACATCAC+TGG | 0.452498 | 8.4:-26210225 | None:intergenic |
| TGATAGGATTGAGTCCTTAA+CGG | 0.453872 | 8.4:+26210892 | MS.gene99224:CDS |
| AACTAACAACAGCTTTGGAT+TGG | 0.456338 | 8.4:+26210546 | MS.gene99224:CDS |
| TGAAGAACTAACAACAGCTT+TGG | 0.456722 | 8.4:+26210541 | MS.gene99224:CDS |
| GTCTCATCACTTGTGCATAA+GGG | 0.458049 | 8.4:-26210368 | None:intergenic |
| ATTAGAAAATAAGCTTGCTT+CGG | 0.458274 | 8.4:+26208493 | MS.gene99224:CDS |
| GTTAAACTCAACTAGTTCAA+TGG | 0.460981 | 8.4:+26209386 | MS.gene99224:CDS |
| TCCAGAGGTTGTATAATGCC+TGG | 0.464954 | 8.4:-26212671 | None:intergenic |
| GATCAATGCTGAATCTCAAA+AGG | 0.476356 | 8.4:+26210838 | MS.gene99224:CDS |
| CATTGTAACTACTAAGAAAC+CGG | 0.478375 | 8.4:+26212757 | MS.gene99224:CDS |
| TCCAGGCATTATACAACCTC+TGG | 0.478551 | 8.4:+26212670 | MS.gene99224:CDS |
| CTTCAGAAGTGGAAAACAAA+AGG | 0.479195 | 8.4:+26209752 | MS.gene99224:CDS |
| ACCACCAAAGAGTTATTTGA+AGG | 0.479471 | 8.4:-26210194 | None:intergenic |
| TGAAGCTTTGCGGGACAGAT+TGG | 0.480204 | 8.4:+26208777 | MS.gene99224:CDS |
| AGAATTAGAGACCAGATGTC+TGG | 0.480614 | 8.4:+26211129 | MS.gene99224:CDS |
| AAAGTCTCTGGTCATATTGA+AGG | 0.480911 | 8.4:+26210164 | MS.gene99224:CDS |
| CGGAAACGGTTACCAGGTCC+TGG | 0.484770 | 8.4:+26209294 | MS.gene99224:CDS |
| GAAGACCTGAGTAAGTCAAT+AGG | 0.484823 | 8.4:+26210284 | MS.gene99224:CDS |
| ATCTTCCCTTGATGAACTAA+AGG | 0.486259 | 8.4:+26209992 | MS.gene99224:CDS |
| CTTGTTCCTTCTTATTTCAA+GGG | 0.487122 | 8.4:-26209364 | None:intergenic |
| TCATGGTCCTGCAGAAGCAT+TGG | 0.487131 | 8.4:+26209777 | MS.gene99224:CDS |
| GAAGCAGAGTTTGGGATGAT+AGG | 0.487695 | 8.4:+26210662 | MS.gene99224:CDS |
| TTAGCAGTAACACTGTCATC+TGG | 0.489817 | 8.4:-26212725 | None:intergenic |
| GAGATGTCCGAAATGTGATC+AGG | 0.490158 | 8.4:-26209951 | None:intergenic |
| GTGGAAAACAAAAGGAATCA+TGG | 0.494775 | 8.4:+26209760 | MS.gene99224:CDS |
| TGTTATCCTTTAGTTCATCA+AGG | 0.494969 | 8.4:-26209998 | None:intergenic |
| AGAATATTAGAGTAGCTTTG+AGG | 0.496510 | 8.4:+26210102 | MS.gene99224:CDS |
| TGAAGCTCCAATGCTTCTGC+AGG | 0.497457 | 8.4:-26209784 | None:intergenic |
| AGAAGCATTATCTTTCTCAA+TGG | 0.498267 | 8.4:-26209109 | None:intergenic |
| GTTACCAGGTCCTGGTTCCC+TGG | 0.500382 | 8.4:+26209302 | MS.gene99224:CDS |
| AACCGGGAAGCGGAAGTTTG+TGG | 0.503170 | 8.4:+26212798 | MS.gene99224:CDS |
| CTGGTTCGGAAACGGTTACC+AGG | 0.505039 | 8.4:+26209288 | MS.gene99224:CDS |
| AATAATTCAGGAATGCCAAC+GGG | 0.505739 | 8.4:+26210404 | MS.gene99224:CDS |
| TCTTTCCTATTGACTTACTC+AGG | 0.507520 | 8.4:-26210289 | None:intergenic |
| GAGATTCCCTTGAAATAAGA+AGG | 0.508635 | 8.4:+26209358 | MS.gene99224:CDS |
| AATTGCAACTCCAGCTTGAA+AGG | 0.510120 | 8.4:+26211152 | MS.gene99224:CDS |
| CCATTTGGATGGAGCTCTGA+AGG | 0.512295 | 8.4:+26208819 | MS.gene99224:CDS |
| CTTCAGAGCTCCATCCAAAT+GGG | 0.513136 | 8.4:-26208818 | None:intergenic |
| CGTTAAAAGATTCCCTAAGT+AGG | 0.514403 | 8.4:+26209502 | MS.gene99224:CDS |
| TGGTTCTCTTTATTGGTGAG+AGG | 0.516501 | 8.4:-26210247 | None:intergenic |
| ACTTTCAAGTGTTCAGTGGA+AGG | 0.518015 | 8.4:-26212868 | None:intergenic |
| GTGTGTTATGATTTACTGAA+TGG | 0.521589 | 8.4:+26210494 | MS.gene99224:CDS |
| ATAGGACTTACCTTTCAAGC+TGG | 0.522101 | 8.4:-26211162 | None:intergenic |
| AGCTTCAGACATAAATCTCA+TGG | 0.522285 | 8.4:+26209800 | MS.gene99224:CDS |
| TCAATGGCTTCTCAGAAACT+AGG | 0.522844 | 8.4:+26209913 | MS.gene99224:CDS |
| AAACATGGAAACTGTTCTGC+GGG | 0.522978 | 8.4:-26210716 | None:intergenic |
| ATCCGTGACAAGTAAAAGGC+TGG | 0.523603 | 8.4:+26208957 | MS.gene99224:CDS |
| CGATTTGTTCGAGAAGAACA+AGG | 0.524891 | 8.4:+26208859 | MS.gene99224:CDS |
| TCCTTCAAATAACTCTTTGG+TGG | 0.527792 | 8.4:+26210193 | MS.gene99224:CDS |
| AATATGACCAGAGACTTTGT+CGG | 0.528015 | 8.4:-26210159 | None:intergenic |
| TGAGGTCCGAGTACTTGAAA+AGG | 0.531107 | 8.4:+26209140 | MS.gene99224:CDS |
| CATAATGAAGAATCATCTAA+AGG | 0.532662 | 8.4:+26209597 | MS.gene99224:CDS |
| GAGAAAGACACTGAAATCTC+TGG | 0.532861 | 8.4:+26209864 | MS.gene99224:CDS |
| GGCTTCAATCAGCTACTGAT+AGG | 0.532979 | 8.4:+26210876 | MS.gene99224:CDS |
| AGGAATGCCAACGGGCTACA+TGG | 0.535263 | 8.4:+26210412 | MS.gene99224:CDS |
| GAAAGAGTAGCCCATTTGGA+TGG | 0.535573 | 8.4:+26208808 | MS.gene99224:CDS |
| AAGAATCAACTTGCCTGCCG+TGG | 0.539762 | 8.4:+26210328 | MS.gene99224:CDS |
| GCCTGGAATGGTGGTGAGAT+CGG | 0.542225 | 8.4:-26212654 | None:intergenic |
| ATATTCTCGAGTATATCATC+AGG | 0.542580 | 8.4:-26210086 | None:intergenic |
| ATTCCTGAATTATTTACTGA+GGG | 0.542973 | 8.4:-26210395 | None:intergenic |
| GTGTAATTCTAAAGACGAGC+TGG | 0.545543 | 8.4:+26208526 | MS.gene99224:CDS |
| CCGAGTACTTGAAAAGGAGT+TGG | 0.546516 | 8.4:+26209146 | MS.gene99224:CDS |
| TTCGAGAAGAACAAGGGCAA+AGG | 0.547361 | 8.4:+26208866 | MS.gene99224:CDS |
| GATTCGGAGCACTTCAGAAG+TGG | 0.547858 | 8.4:+26209741 | MS.gene99224:CDS |
| GTTGTCGGTGAAGCAAGGTC+TGG | 0.549630 | 8.4:+26208753 | MS.gene99224:CDS |
| ATTCTTCTATTGGGAGTCCC+AGG | 0.550407 | 8.4:-26209432 | None:intergenic |
| ATTAAAAGAGGTCGGTCTCA+AGG | 0.553721 | 8.4:+26211060 | MS.gene99224:CDS |
| TTCTTAGTAGGTACAATGGC+CGG | 0.554541 | 8.4:-26212776 | None:intergenic |
| CTTCAATTGACAGTTCTCCT+GGG | 0.556684 | 8.4:+26209415 | MS.gene99224:CDS |
| GATTCATGATGCTGTGATGA+AGG | 0.557033 | 8.4:+26208888 | MS.gene99224:CDS |
| TGAATCTCAAAAGGAAACAT+TGG | 0.560533 | 8.4:+26210847 | MS.gene99224:CDS |
| TGTTCTCAGCATGCCAAAGG+AGG | 0.561256 | 8.4:+26211269 | MS.gene99224:intron |
| TAATGCTTCTCTGACATATG+AGG | 0.561537 | 8.4:+26209122 | MS.gene99224:CDS |
| TTTGCCAGGGAACCAGGACC+TGG | 0.563279 | 8.4:-26209306 | None:intergenic |
| CGGTTTCTTAGTAGGTACAA+TGG | 0.565201 | 8.4:-26212780 | None:intergenic |
| ATTGCACAAGAAGCAGTGGC+AGG | 0.569097 | 8.4:+26208566 | MS.gene99224:CDS |
| ATCTGAATTATCACAATCCA+CGG | 0.569864 | 8.4:-26210345 | None:intergenic |
| AAGGTCTGGATGAAGCTTTG+CGG | 0.572407 | 8.4:+26208767 | MS.gene99224:CDS |
| ACTACATCCTGAAGCCAACT+GGG | 0.574852 | 8.4:-26210023 | None:intergenic |
| GAATTATCACAATCCACGGC+AGG | 0.575539 | 8.4:-26210341 | None:intergenic |
| CCATTTGAAGTAGTTACTTG+AGG | 0.575575 | 8.4:-26210740 | None:intergenic |
| GTTATCCTTTAGTTCATCAA+GGG | 0.578574 | 8.4:-26209997 | None:intergenic |
| CATTCCTGAATTATTTACTG+AGG | 0.578669 | 8.4:-26210396 | None:intergenic |
| ATCTAAAGGTCAAGTTGCTG+TGG | 0.578768 | 8.4:+26209611 | MS.gene99224:CDS |
| GGTTAGCTGTGCTGACTCCT+CGG | 0.581274 | 8.4:+26209701 | MS.gene99224:CDS |
| AGATGTCCGAAATGTGATCA+GGG | 0.583171 | 8.4:-26209950 | None:intergenic |
| CGGTTTCTTAGTAGTTACAA+TGG | 0.584722 | 8.4:-26212756 | None:intergenic |
| CTTTCAAGTGTTCAGTGGAA+GGG | 0.585485 | 8.4:-26212867 | None:intergenic |
| TCGAGAGATGTATTCTGATG+AGG | 0.588322 | 8.4:+26210784 | MS.gene99224:CDS |
| TGAGACTTTCAAGTGTTCAG+TGG | 0.591758 | 8.4:-26212872 | None:intergenic |
| AGAATCTTATGGAATACTTG+AGG | 0.592051 | 8.4:+26210976 | MS.gene99224:CDS |
| GATAAACTTACAGTTCGCAA+TGG | 0.595440 | 8.4:-26211324 | None:intergenic |
| TCTCAAAAGGAAACATTGGA+AGG | 0.596127 | 8.4:+26210851 | MS.gene99224:CDS |
| GTTCTCAGCATGCCAAAGGA+GGG | 0.598290 | 8.4:+26211270 | MS.gene99224:intron |
| TGAAGATGATACTAAATCCA+AGG | 0.601228 | 8.4:+26212607 | MS.gene99224:CDS |
| AAAAGAGTGCATGGTTTGGG+AGG | 0.602469 | 8.4:+26208927 | MS.gene99224:CDS |
| TAAAGGATAACATTCCCAGT+TGG | 0.608418 | 8.4:+26210009 | MS.gene99224:CDS |
| AAAGATAAAATCTTCTCCAG+AGG | 0.609414 | 8.4:-26212686 | None:intergenic |
| GAAGTGTTGTCGGTGAAGCA+AGG | 0.611312 | 8.4:+26208748 | MS.gene99224:CDS |
| CCTACTAAGAAACCGGGAAG+CGG | 0.611824 | 8.4:+26212788 | MS.gene99224:CDS |
| TGGTGGTGAGATCGGAGTCA+CGG | 0.613950 | 8.4:-26212646 | None:intergenic |
| CTCAAAAGGAAACATTGGAA+GGG | 0.614996 | 8.4:+26210852 | MS.gene99224:CDS |
| AAATAATTCAGGAATGCCAA+CGG | 0.615232 | 8.4:+26210403 | MS.gene99224:CDS |
| TTGTATAATGCCTGGAATGG+TGG | 0.616953 | 8.4:-26212663 | None:intergenic |
| TAAAGGGGCGGAATTAAAAG+AGG | 0.618771 | 8.4:+26211048 | MS.gene99224:CDS |
| TAATGTTCTCAGCATGCCAA+AGG | 0.619696 | 8.4:+26211266 | MS.gene99224:intron |
| GTAATATTTACATCACTGGA+TGG | 0.620257 | 8.4:-26210221 | None:intergenic |
| GTAGTTACTTGAGGAAAACA+TGG | 0.620760 | 8.4:-26210731 | None:intergenic |
| TCTCTAATTCTTCACAACTG+TGG | 0.621010 | 8.4:-26211117 | None:intergenic |
| TGAAATCAATGCAGAAGCCG+AGG | 0.632280 | 8.4:-26209718 | None:intergenic |
| TAAAATTGCACAAGAAGCAG+TGG | 0.633283 | 8.4:+26208562 | MS.gene99224:CDS |
| TTATGATTTACTGAATGGCA+AGG | 0.634162 | 8.4:+26210499 | MS.gene99224:CDS |
| GAGAAACATCAGCTGTCCGA+CGG | 0.634574 | 8.4:-26209197 | None:intergenic |
| AAAAGGAAACATTGGAAGGG+CGG | 0.636835 | 8.4:+26210855 | MS.gene99224:CDS |
| AAGAGAGAGAATTTGGCCGT+CGG | 0.643970 | 8.4:+26209181 | MS.gene99224:CDS |
| ACACGGACCATGTAGCCCGT+TGG | 0.651352 | 8.4:-26210419 | None:intergenic |
| GGGGCGGAATTAAAAGAGGT+CGG | 0.656076 | 8.4:+26211052 | MS.gene99224:CDS |
| AAAACATGGAAACTGTTCTG+CGG | 0.658488 | 8.4:-26210717 | None:intergenic |
| GATTTGTTCGAGAAGAACAA+GGG | 0.659287 | 8.4:+26208860 | MS.gene99224:CDS |
| AAAACAATTGACTCAAGCTG+AGG | 0.660596 | 8.4:+26209053 | MS.gene99224:CDS |
| AGGTTGTATAATGCCTGGAA+TGG | 0.662462 | 8.4:-26212666 | None:intergenic |
| TCTTGATGCACAGCATAAAG+GGG | 0.662787 | 8.4:+26211033 | MS.gene99224:CDS |
| TGATATTGGCAGTGATGACA+AGG | 0.666015 | 8.4:+26209680 | MS.gene99224:CDS |
| TTGTCGGAACCAAAGACGCA+CGG | 0.676067 | 8.4:-26210143 | None:intergenic |
| ATTGTACCTACTAAGAAACC+GGG | 0.677949 | 8.4:+26212782 | MS.gene99224:CDS |
| ATGCCAAAGAGAACTCGCAA+AGG | 0.678638 | 8.4:-26209650 | None:intergenic |
| TGATGCACAGCATAAAGGGG+CGG | 0.680634 | 8.4:+26211036 | MS.gene99224:CDS |
| CACTTCAAAAGAAAATGGAG+AGG | 0.682330 | 8.4:+26208040 | MS.gene99224:CDS |
| GTAACCGTTTCCGAACCAGA+AGG | 0.688384 | 8.4:-26209284 | None:intergenic |
| GATGTCCGAAATGTGATCAG+GGG | 0.709099 | 8.4:-26209949 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATAAATAAATGAATAAAA+AGG | - | chr8.4:26208211-26208230 | None:intergenic | 10.0% |
| !! | GAAGAAATTAAAAATATTAA+AGG | + | chr8.4:26210809-26210828 | MS.gene99224:CDS | 10.0% |
| !!! | GTTTTATAAATTACAAATTA+GGG | + | chr8.4:26211482-26211501 | MS.gene99224:intron | 10.0% |
| !!! | TGTTTTATAAATTACAAATT+AGG | + | chr8.4:26211481-26211500 | MS.gene99224:intron | 10.0% |
| !! | AAATAAATGAATAAAAAGGA+TGG | - | chr8.4:26208207-26208226 | None:intergenic | 15.0% |
| !!! | TAACTTTTAATTTCTAATTG+AGG | + | chr8.4:26211225-26211244 | MS.gene99224:intron | 15.0% |
| !!! | TCTTTCATTTTTTTTTTCTT+AGG | + | chr8.4:26208311-26208330 | MS.gene99224:intron | 15.0% |
| !!! | TTATCATTTTCCAATTATTA+TGG | + | chr8.4:26208128-26208147 | MS.gene99224:intron | 15.0% |
| !! | AAAAAATGAAAGAATCTTCT+TGG | - | chr8.4:26208304-26208323 | None:intergenic | 20.0% |
| !! | AAAAATGAAGTTGAAATGTT+AGG | + | chr8.4:26209333-26209352 | MS.gene99224:CDS | 20.0% |
| !! | AATAAAAATTGATACCTAGA+TGG | - | chr8.4:26211978-26211997 | None:intergenic | 20.0% |
| !! | AATCAGAAGATAACAAAAAT+AGG | - | chr8.4:26212011-26212030 | None:intergenic | 20.0% |
| !! | ACTACTTGTGATAAAAATAA+TGG | + | chr8.4:26208387-26208406 | MS.gene99224:intron | 20.0% |
| !! | ATAATTCAATTTGACAACAT+TGG | - | chr8.4:26212289-26212308 | None:intergenic | 20.0% |
| !! | CTACTTGTGATAAAAATAAT+GGG | + | chr8.4:26208388-26208407 | MS.gene99224:intron | 20.0% |
| !! | TGAAACAAATATTTGAAGAT+AGG | - | chr8.4:26211183-26211202 | None:intergenic | 20.0% |
| !! | TTACAACATACCATAATAAT+TGG | - | chr8.4:26208141-26208160 | None:intergenic | 20.0% |
| !! | TTCAAACTAATTTGAATAGA+AGG | + | chr8.4:26211687-26211706 | MS.gene99224:intron | 20.0% |
| !!! | ATTCTTTTTCATAACTTTCA+GGG | - | chr8.4:26212561-26212580 | None:intergenic | 20.0% |
| !!! | TAGTTTTAGAGTTCTTTTAA+CGG | + | chr8.4:26208680-26208699 | MS.gene99224:intron | 20.0% |
| !!! | TATTCCATAAGATTCTTTTA+AGG | - | chr8.4:26210972-26210991 | None:intergenic | 20.0% |
| !!! | TTTACTTATTTTCTTGTCTT+AGG | - | chr8.4:26208641-26208660 | None:intergenic | 20.0% |
| ! | AATATTCCAGAGTTTAACAT+AGG | - | chr8.4:26211396-26211415 | None:intergenic | 25.0% |
| ! | AATCTCACTTCAAAAGAAAA+TGG | + | chr8.4:26208035-26208054 | MS.gene99224:CDS | 25.0% |
| ! | ACCATCATTTACAATTATAC+TGG | - | chr8.4:26212110-26212129 | None:intergenic | 25.0% |
| ! | ATCTAATTAATTCAGCACAA+AGG | - | chr8.4:26208338-26208357 | None:intergenic | 25.0% |
| ! | ATTCCTAATTGAAATAGTCT+TGG | + | chr8.4:26211823-26211842 | MS.gene99224:intron | 25.0% |
| ! | ATTCCTGAATTATTTACTGA+GGG | - | chr8.4:26210398-26210417 | None:intergenic | 25.0% |
| ! | CAATCCTTAAAAGAATCTTA+TGG | + | chr8.4:26210965-26210984 | MS.gene99224:CDS | 25.0% |
| ! | CATAATGAAGAATCATCTAA+AGG | + | chr8.4:26209597-26209616 | MS.gene99224:CDS | 25.0% |
| ! | CATCAAGAAACAATTTGATT+GGG | + | chr8.4:26210619-26210638 | MS.gene99224:CDS | 25.0% |
| ! | TCCAGTATAATTGTAAATGA+TGG | + | chr8.4:26212106-26212125 | MS.gene99224:intron | 25.0% |
| ! | TCTAATTAATTCAGCACAAA+GGG | - | chr8.4:26208337-26208356 | None:intergenic | 25.0% |
| ! | TGCAATAACATTGTCAAAAA+GGG | - | chr8.4:26212468-26212487 | None:intergenic | 25.0% |
| ! | TGTCAAATTGAATTATGAGT+TGG | + | chr8.4:26212293-26212312 | MS.gene99224:intron | 25.0% |
| ! | TTATATCATGATGATTACGT+TGG | + | chr8.4:26208171-26208190 | MS.gene99224:intron | 25.0% |
| ! | TTTCACAGTGAAAACAAAAT+GGG | - | chr8.4:26211932-26211951 | None:intergenic | 25.0% |
| !! | ATTAGAAAATAAGCTTGCTT+CGG | + | chr8.4:26208493-26208512 | MS.gene99224:CDS | 25.0% |
| !! | CAATTTTTCTCTTGCAAAAA+TGG | - | chr8.4:26209019-26209038 | None:intergenic | 25.0% |
| !! | TATCTAACAGTTTCTTGTTT+CGG | - | chr8.4:26212058-26212077 | None:intergenic | 25.0% |
| !! | TTTTCACAGTGAAAACAAAA+TGG | - | chr8.4:26211933-26211952 | None:intergenic | 25.0% |
| !!! | AAAATAATGGGTATGTTGTT+TGG | + | chr8.4:26208400-26208419 | MS.gene99224:intron | 25.0% |
| !!! | AAAGTATCGATTCTTCTATT+GGG | - | chr8.4:26209444-26209463 | None:intergenic | 25.0% |
| !!! | ATTTTCTTTTGAAGTGAGAT+TGG | - | chr8.4:26208036-26208055 | None:intergenic | 25.0% |
| !!! | GATTCTTTTTCATAACTTTC+AGG | - | chr8.4:26212562-26212581 | None:intergenic | 25.0% |
| !!! | TTCATTTTTCATTTTTGCCA+GGG | - | chr8.4:26209322-26209341 | None:intergenic | 25.0% |
| !!! | TTCTTTTTCATAACTTTCAG+GGG | - | chr8.4:26212560-26212579 | None:intergenic | 25.0% |
| !!! | TTTTTAGTCAATCATACACA+TGG | - | chr8.4:26212248-26212267 | None:intergenic | 25.0% |
| AAACATCAAACCTGAATTAG+GGG | - | chr8.4:26212178-26212197 | None:intergenic | 30.0% | |
| AAAGATAAAATCTTCTCCAG+AGG | - | chr8.4:26212689-26212708 | None:intergenic | 30.0% | |
| AAATAATTCAGGAATGCCAA+CGG | + | chr8.4:26210403-26210422 | MS.gene99224:CDS | 30.0% | |
| AAGAAACCATCCTTAATCTT+GGG | + | chr8.4:26212405-26212424 | MS.gene99224:intron | 30.0% | |
| ACTATGAGTCATTGAGAAAA+AGG | - | chr8.4:26211360-26211379 | None:intergenic | 30.0% | |
| AGAATCTTATGGAATACTTG+AGG | + | chr8.4:26210976-26210995 | MS.gene99224:CDS | 30.0% | |
| ATATTCTCGAGTATATCATC+AGG | - | chr8.4:26210089-26210108 | None:intergenic | 30.0% | |
| ATCTGAATTATCACAATCCA+CGG | - | chr8.4:26210348-26210367 | None:intergenic | 30.0% | |
| CAAACATCAAACCTGAATTA+GGG | - | chr8.4:26212179-26212198 | None:intergenic | 30.0% | |
| CAAATTCTCTCTCTTCATTT+CGG | - | chr8.4:26209176-26209195 | None:intergenic | 30.0% | |
| CATTCCTGAATTATTTACTG+AGG | - | chr8.4:26210399-26210418 | None:intergenic | 30.0% | |
| CATTGTAACTACTAAGAAAC+CGG | + | chr8.4:26212757-26212776 | MS.gene99224:CDS | 30.0% | |
| CCATCAAGAAACAATTTGAT+TGG | + | chr8.4:26210618-26210637 | MS.gene99224:CDS | 30.0% | |
| CTGCAATAACATTGTCAAAA+AGG | - | chr8.4:26212469-26212488 | None:intergenic | 30.0% | |
| GAGATATGTTAATGCTTTGT+TGG | + | chr8.4:26211729-26211748 | MS.gene99224:intron | 30.0% | |
| GTAATATTTACATCACTGGA+TGG | - | chr8.4:26210224-26210243 | None:intergenic | 30.0% | |
| GTCAGTAATATTTACATCAC+TGG | - | chr8.4:26210228-26210247 | None:intergenic | 30.0% | |
| GTGTGTTATGATTTACTGAA+TGG | + | chr8.4:26210494-26210513 | MS.gene99224:CDS | 30.0% | |
| GTGTTAAAATCTTGCTTTGA+AGG | + | chr8.4:26208706-26208725 | MS.gene99224:intron | 30.0% | |
| GTTAAACTCAACTAGTTCAA+TGG | + | chr8.4:26209386-26209405 | MS.gene99224:CDS | 30.0% | |
| GTTTGTGGAAGAAGTTATTA+TGG | + | chr8.4:26212813-26212832 | MS.gene99224:CDS | 30.0% | |
| TCAAGGTAACAAAAACTTAC+AGG | + | chr8.4:26211798-26211817 | MS.gene99224:intron | 30.0% | |
| TCTATAACTTCCAACTTTCA+AGG | + | chr8.4:26211781-26211800 | MS.gene99224:intron | 30.0% | |
| TCTTGCTGATAAAGAAGAAT+TGG | + | chr8.4:26208454-26208473 | MS.gene99224:CDS | 30.0% | |
| TGAAATGGAAAAATTAGCAG+TGG | + | chr8.4:26209833-26209852 | MS.gene99224:CDS | 30.0% | |
| TGAAGATGATACTAAATCCA+AGG | + | chr8.4:26212607-26212626 | MS.gene99224:CDS | 30.0% | |
| TGAATCTCAAAAGGAAACAT+TGG | + | chr8.4:26210847-26210866 | MS.gene99224:CDS | 30.0% | |
| TGATCCTTCAAATAACTCTT+TGG | + | chr8.4:26210190-26210209 | MS.gene99224:CDS | 30.0% | |
| TGCAAGAGAAAAATTGATTG+AGG | + | chr8.4:26209023-26209042 | MS.gene99224:CDS | 30.0% | |
| TTATGATTTACTGAATGGCA+AGG | + | chr8.4:26210499-26210518 | MS.gene99224:CDS | 30.0% | |
| TTCAATGCTTACTCCAAATT+GGG | - | chr8.4:26211510-26211529 | None:intergenic | 30.0% | |
| TTGGAATTAAACATACCTAC+AGG | + | chr8.4:26211617-26211636 | MS.gene99224:intron | 30.0% | |
| ! | AAAGCATTACTCTTGAGAAT+TGG | - | chr8.4:26209542-26209561 | None:intergenic | 30.0% |
| ! | ACTTGTTCCTTCTTATTTCA+AGG | - | chr8.4:26209368-26209387 | None:intergenic | 30.0% |
| ! | AGAATATTAGAGTAGCTTTG+AGG | + | chr8.4:26210102-26210121 | MS.gene99224:CDS | 30.0% |
| ! | AGAATTTGAAAAAGAGTGCA+TGG | + | chr8.4:26208918-26208937 | MS.gene99224:CDS | 30.0% |
| ! | ATATGTTAATGCTTTGTTGG+TGG | + | chr8.4:26211732-26211751 | MS.gene99224:intron | 30.0% |
| ! | ATCTAACAGTTTCTTGTTTC+GGG | - | chr8.4:26212057-26212076 | None:intergenic | 30.0% |
| ! | ATGTTTTCCATTGGAAAACA+CGG | - | chr8.4:26210439-26210458 | None:intergenic | 30.0% |
| ! | CCAATCAAATTGTTTCTTGA+TGG | - | chr8.4:26210621-26210640 | None:intergenic | 30.0% |
| ! | CGAGATGTAACTTTTGTATA+GGG | - | chr8.4:26211443-26211462 | None:intergenic | 30.0% |
| ! | CTCATTCATTTTCCTACTTA+GGG | - | chr8.4:26209517-26209536 | None:intergenic | 30.0% |
| ! | CTTGTTCCTTCTTATTTCAA+GGG | - | chr8.4:26209367-26209386 | None:intergenic | 30.0% |
| ! | GTTATCCTTTAGTTCATCAA+GGG | - | chr8.4:26210000-26210019 | None:intergenic | 30.0% |
| ! | GTTTTTGTTACCTTGAAAGT+TGG | - | chr8.4:26211794-26211813 | None:intergenic | 30.0% |
| ! | TATGTTAATGCTTTGTTGGT+GGG | + | chr8.4:26211733-26211752 | MS.gene99224:intron | 30.0% |
| ! | TCGAGATGTAACTTTTGTAT+AGG | - | chr8.4:26211444-26211463 | None:intergenic | 30.0% |
| ! | TGTTATCCTTTAGTTCATCA+AGG | - | chr8.4:26210001-26210020 | None:intergenic | 30.0% |
| !! | AAAATCTTGCTTTGAAGGTT+TGG | + | chr8.4:26208711-26208730 | MS.gene99224:intron | 30.0% |
| !! | AAAGAAGTTGATGAGATCAA+TGG | + | chr8.4:26209897-26209916 | MS.gene99224:CDS | 30.0% |
| !! | AGAAGCATTATCTTTCTCAA+TGG | - | chr8.4:26209112-26209131 | None:intergenic | 30.0% |
| !! | CAAAGTATCGATTCTTCTAT+TGG | - | chr8.4:26209445-26209464 | None:intergenic | 30.0% |
| !! | CTTCATTTTTCATTTTTGCC+AGG | - | chr8.4:26209323-26209342 | None:intergenic | 30.0% |
| !! | TCTCTGAAACATACAATGTA+CGG | + | chr8.4:26211550-26211569 | MS.gene99224:intron | 30.0% |
| !! | TGTCTTTCTGGTTAATATCA+TGG | - | chr8.4:26211302-26211321 | None:intergenic | 30.0% |
| !! | TTCTGCATTGATTTCAGATT+CGG | + | chr8.4:26209725-26209744 | MS.gene99224:CDS | 30.0% |
| !!! | ATTCGTTTTTGTTGTTGTGA+TGG | - | chr8.4:26212525-26212544 | None:intergenic | 30.0% |
| !!! | TATGAGTTGGTTTTTCATGT+TGG | + | chr8.4:26212306-26212325 | MS.gene99224:intron | 30.0% |
| AAAACATGGAAACTGTTCTG+CGG | - | chr8.4:26210720-26210739 | None:intergenic | 35.0% | |
| AAAACTACTGCAGTCATAAG+TGG | - | chr8.4:26208667-26208686 | None:intergenic | 35.0% | |
| AAAGTCTCTGGTCATATTGA+AGG | + | chr8.4:26210164-26210183 | MS.gene99224:CDS | 35.0% | |
| AATAATTCAGGAATGCCAAC+GGG | + | chr8.4:26210404-26210423 | MS.gene99224:CDS | 35.0% | |
| AATATGACCAGAGACTTTGT+CGG | - | chr8.4:26210162-26210181 | None:intergenic | 35.0% | |
| AATTCCAATCATCTACCAGA+AGG | - | chr8.4:26211605-26211624 | None:intergenic | 35.0% | |
| ACAAATTAGGGATCCCAATT+TGG | + | chr8.4:26211494-26211513 | MS.gene99224:intron | 35.0% | |
| ACCACCAAAGAGTTATTTGA+AGG | - | chr8.4:26210197-26210216 | None:intergenic | 35.0% | |
| AGCTTCAGACATAAATCTCA+TGG | + | chr8.4:26209800-26209819 | MS.gene99224:CDS | 35.0% | |
| AGTTATCCGTGACAAGTAAA+AGG | + | chr8.4:26208953-26208972 | MS.gene99224:CDS | 35.0% | |
| ATCATACACATGGAGATAAG+TGG | - | chr8.4:26212238-26212257 | None:intergenic | 35.0% | |
| ATCTTCCCTTGATGAACTAA+AGG | + | chr8.4:26209992-26210011 | MS.gene99224:CDS | 35.0% | |
| ATCTTGATGCACAGCATAAA+GGG | + | chr8.4:26211032-26211051 | MS.gene99224:CDS | 35.0% | |
| ATTGTACCTACTAAGAAACC+GGG | + | chr8.4:26212782-26212801 | MS.gene99224:CDS | 35.0% | |
| CAAGAAACCATCCTTAATCT+TGG | + | chr8.4:26212404-26212423 | MS.gene99224:intron | 35.0% | |
| CACATAATATCGAAGAACCA+AGG | - | chr8.4:26211649-26211668 | None:intergenic | 35.0% | |
| CACTTCAAAAGAAAATGGAG+AGG | + | chr8.4:26208040-26208059 | MS.gene99224:CDS | 35.0% | |
| CATGGATGACTTTGTTGAAA+TGG | + | chr8.4:26209818-26209837 | MS.gene99224:CDS | 35.0% | |
| CATTGTACCTACTAAGAAAC+CGG | + | chr8.4:26212781-26212800 | MS.gene99224:CDS | 35.0% | |
| CCAAACATCAAACCTGAATT+AGG | - | chr8.4:26212180-26212199 | None:intergenic | 35.0% | |
| CCTCAAGTAACTACTTCAAA+TGG | + | chr8.4:26210740-26210759 | MS.gene99224:CDS | 35.0% | |
| CGAAATGAAGAGAGAGAATT+TGG | + | chr8.4:26209174-26209193 | MS.gene99224:CDS | 35.0% | |
| CGGTTTCTTAGTAGTTACAA+TGG | - | chr8.4:26212759-26212778 | None:intergenic | 35.0% | |
| CGTTAAAAGATTCCCTAAGT+AGG | + | chr8.4:26209502-26209521 | MS.gene99224:CDS | 35.0% | |
| CTAGTTCCTATGTTAAACTC+TGG | + | chr8.4:26211387-26211406 | MS.gene99224:intron | 35.0% | |
| CTCAAAAGGAAACATTGGAA+GGG | + | chr8.4:26210852-26210871 | MS.gene99224:CDS | 35.0% | |
| CTGACATTCTGATTCTAACT+TGG | - | chr8.4:26209256-26209275 | None:intergenic | 35.0% | |
| CTTCAGAAGTGGAAAACAAA+AGG | + | chr8.4:26209752-26209771 | MS.gene99224:CDS | 35.0% | |
| GACTGATATGGTTTAGAAAG+TGG | + | chr8.4:26212131-26212150 | MS.gene99224:intron | 35.0% | |
| GAGATTCCCTTGAAATAAGA+AGG | + | chr8.4:26209358-26209377 | MS.gene99224:CDS | 35.0% | |
| GATAAACTTACAGTTCGCAA+TGG | - | chr8.4:26211327-26211346 | None:intergenic | 35.0% | |
| GATCAATGCTGAATCTCAAA+AGG | + | chr8.4:26210838-26210857 | MS.gene99224:CDS | 35.0% | |
| GGATGTAGTAAAAATGATCC+TGG | + | chr8.4:26210037-26210056 | MS.gene99224:CDS | 35.0% | |
| GTACCCTCAGTAAATAATTC+AGG | + | chr8.4:26210392-26210411 | MS.gene99224:CDS | 35.0% | |
| GTAGTTACTTGAGGAAAACA+TGG | - | chr8.4:26210734-26210753 | None:intergenic | 35.0% | |
| GTGGAAAACAAAAGGAATCA+TGG | + | chr8.4:26209760-26209779 | MS.gene99224:CDS | 35.0% | |
| GTTCAATGCTTACTCCAAAT+TGG | - | chr8.4:26211511-26211530 | None:intergenic | 35.0% | |
| TAAAATTGCACAAGAAGCAG+TGG | + | chr8.4:26208562-26208581 | MS.gene99224:CDS | 35.0% | |
| TAAAGGATAACATTCCCAGT+TGG | + | chr8.4:26210009-26210028 | MS.gene99224:CDS | 35.0% | |
| TAAATGATGGTCGACTGATA+TGG | + | chr8.4:26212119-26212138 | MS.gene99224:intron | 35.0% | |
| TAATGCTTCTCTGACATATG+AGG | + | chr8.4:26209122-26209141 | MS.gene99224:CDS | 35.0% | |
| TCAGGATGTTTCTTGTATGA+AGG | + | chr8.4:26210592-26210611 | MS.gene99224:CDS | 35.0% | |
| TCCTTCAAATAACTCTTTGG+TGG | + | chr8.4:26210193-26210212 | MS.gene99224:CDS | 35.0% | |
| TCTCAAAAGGAAACATTGGA+AGG | + | chr8.4:26210851-26210870 | MS.gene99224:CDS | 35.0% | |
| TCTCTAATTCTTCACAACTG+TGG | - | chr8.4:26211120-26211139 | None:intergenic | 35.0% | |
| TGAAGAACTAACAACAGCTT+TGG | + | chr8.4:26210541-26210560 | MS.gene99224:CDS | 35.0% | |
| TGATAGGATTGAGTCCTTAA+CGG | + | chr8.4:26210892-26210911 | MS.gene99224:CDS | 35.0% | |
| TTGGCATCAATGTCTGATAT+TGG | + | chr8.4:26209666-26209685 | MS.gene99224:CDS | 35.0% | |
| ! | AAAACAATTGACTCAAGCTG+AGG | + | chr8.4:26209053-26209072 | MS.gene99224:CDS | 35.0% |
| ! | CAGTGTTACTGCTAATGATT+TGG | + | chr8.4:26212733-26212752 | MS.gene99224:CDS | 35.0% |
| ! | CCATTTGAAGTAGTTACTTG+AGG | - | chr8.4:26210743-26210762 | None:intergenic | 35.0% |
| ! | CCTAATTCAGGTTTGATGTT+TGG | + | chr8.4:26212177-26212196 | MS.gene99224:intron | 35.0% |
| ! | GATTTGTTCGAGAAGAACAA+GGG | + | chr8.4:26208860-26208879 | MS.gene99224:CDS | 35.0% |
| ! | GCTCATTCATTTTCCTACTT+AGG | - | chr8.4:26209518-26209537 | None:intergenic | 35.0% |
| ! | TGAAAAAGAGTGCATGGTTT+GGG | + | chr8.4:26208924-26208943 | MS.gene99224:CDS | 35.0% |
| ! | TGAGTTCAGATGTTTTCCAT+TGG | - | chr8.4:26210448-26210467 | None:intergenic | 35.0% |
| ! | TTCCAAAAGTTGATCCGTTA+AGG | - | chr8.4:26210909-26210928 | None:intergenic | 35.0% |
| ! | TTGAAAAAGAGTGCATGGTT+TGG | + | chr8.4:26208923-26208942 | MS.gene99224:CDS | 35.0% |
| !! | AACTAACAACAGCTTTGGAT+TGG | + | chr8.4:26210546-26210565 | MS.gene99224:CDS | 35.0% |
| !! | AGCAAAAGTTGAAGTGTTGT+CGG | + | chr8.4:26208738-26208757 | MS.gene99224:CDS | 35.0% |
| !! | GAATCACTGTTTTTCACTTC+AGG | + | chr8.4:26210574-26210593 | MS.gene99224:CDS | 35.0% |
| !! | GGTTTGATTTTCCGTGTTTT+AGG | + | chr8.4:26208421-26208440 | MS.gene99224:intron | 35.0% |
| !! | TCTTTCCTATTGACTTACTC+AGG | - | chr8.4:26210292-26210311 | None:intergenic | 35.0% |
| !! | TGCTGTTTGGTTCTCTTTAT+TGG | - | chr8.4:26210257-26210276 | None:intergenic | 35.0% |
| !!! | CAAGGTTTTGGAATTAGAAG+TGG | + | chr8.4:26211078-26211097 | MS.gene99224:CDS | 35.0% |
| AAAAGGAAACATTGGAAGGG+CGG | + | chr8.4:26210855-26210874 | MS.gene99224:CDS | 40.0% | |
| AAACATGGAAACTGTTCTGC+GGG | - | chr8.4:26210719-26210738 | None:intergenic | 40.0% | |
| AATTGCAACTCCAGCTTGAA+AGG | + | chr8.4:26211152-26211171 | MS.gene99224:CDS | 40.0% | |
| AGAATTAGAGACCAGATGTC+TGG | + | chr8.4:26211129-26211148 | MS.gene99224:CDS | 40.0% | |
| AGATGTCCGAAATGTGATCA+GGG | - | chr8.4:26209953-26209972 | None:intergenic | 40.0% | |
| AGATTGGCAATCGACAAGTT+AGG | + | chr8.4:26212200-26212219 | MS.gene99224:intron | 40.0% | |
| AGGTTGTATAATGCCTGGAA+TGG | - | chr8.4:26212669-26212688 | None:intergenic | 40.0% | |
| AGTCTCATCACTTGTGCATA+AGG | - | chr8.4:26210372-26210391 | None:intergenic | 40.0% | |
| ATAGGACTTACCTTTCAAGC+TGG | - | chr8.4:26211165-26211184 | None:intergenic | 40.0% | |
| ATTAAAAGAGGTCGGTCTCA+AGG | + | chr8.4:26211060-26211079 | MS.gene99224:CDS | 40.0% | |
| CAGGTTTGATGTTTGGAGAT+TGG | + | chr8.4:26212184-26212203 | MS.gene99224:intron | 40.0% | |
| CGGTTTCTTAGTAGGTACAA+TGG | - | chr8.4:26212783-26212802 | None:intergenic | 40.0% | |
| CTTCAATTGACAGTTCTCCT+GGG | + | chr8.4:26209415-26209434 | MS.gene99224:CDS | 40.0% | |
| GAAGACCTGAGTAAGTCAAT+AGG | + | chr8.4:26210284-26210303 | MS.gene99224:CDS | 40.0% | |
| GAGAAAGACACTGAAATCTC+TGG | + | chr8.4:26209864-26209883 | MS.gene99224:CDS | 40.0% | |
| GATCTTGATGCACAGCATAA+AGG | + | chr8.4:26211031-26211050 | MS.gene99224:CDS | 40.0% | |
| GATTCATGATGCTGTGATGA+AGG | + | chr8.4:26208888-26208907 | MS.gene99224:CDS | 40.0% | |
| GATTGGCAATCGACAAGTTA+GGG | + | chr8.4:26212201-26212220 | MS.gene99224:intron | 40.0% | |
| GCGCCAAGACTATTTCAATT+AGG | - | chr8.4:26211829-26211848 | None:intergenic | 40.0% | |
| GGCATGCTGAGAACATTAAT+TGG | - | chr8.4:26211264-26211283 | None:intergenic | 40.0% | |
| GTCTCATCACTTGTGCATAA+GGG | - | chr8.4:26210371-26210390 | None:intergenic | 40.0% | |
| TAAAGGGGCGGAATTAAAAG+AGG | + | chr8.4:26211048-26211067 | MS.gene99224:CDS | 40.0% | |
| TAACCTTTGCGAGTTCTCTT+TGG | + | chr8.4:26209647-26209666 | MS.gene99224:CDS | 40.0% | |
| TAATGTTCTCAGCATGCCAA+AGG | + | chr8.4:26211266-26211285 | MS.gene99224:intron | 40.0% | |
| TACCAGAAGGAACCAAATCA+TGG | - | chr8.4:26211592-26211611 | None:intergenic | 40.0% | |
| TCAAAAAGGGATGCATCCTT+TGG | - | chr8.4:26212455-26212474 | None:intergenic | 40.0% | |
| TCAATGGCTTCTCAGAAACT+AGG | + | chr8.4:26209913-26209932 | MS.gene99224:CDS | 40.0% | |
| TCGAGAGATGTATTCTGATG+AGG | + | chr8.4:26210784-26210803 | MS.gene99224:CDS | 40.0% | |
| TCTTCAATTGACAGTTCTCC+TGG | + | chr8.4:26209414-26209433 | MS.gene99224:CDS | 40.0% | |
| TCTTGATGCACAGCATAAAG+GGG | + | chr8.4:26211033-26211052 | MS.gene99224:CDS | 40.0% | |
| TGAAGAAAGAGTAGCCCATT+TGG | + | chr8.4:26208804-26208823 | MS.gene99224:CDS | 40.0% | |
| TGATATTGGCAGTGATGACA+AGG | + | chr8.4:26209680-26209699 | MS.gene99224:CDS | 40.0% | |
| TGGTTCTCTTTATTGGTGAG+AGG | - | chr8.4:26210250-26210269 | None:intergenic | 40.0% | |
| TTAGCAGTAACACTGTCATC+TGG | - | chr8.4:26212728-26212747 | None:intergenic | 40.0% | |
| TTCTTAGTAGGTACAATGGC+CGG | - | chr8.4:26212779-26212798 | None:intergenic | 40.0% | |
| TTGCTAAATCCTACAGGACT+TGG | + | chr8.4:26212346-26212365 | MS.gene99224:intron | 40.0% | |
| TTGTATAATGCCTGGAATGG+TGG | - | chr8.4:26212666-26212685 | None:intergenic | 40.0% | |
| ! | ATCTAAAGGTCAAGTTGCTG+TGG | + | chr8.4:26209611-26209630 | MS.gene99224:CDS | 40.0% |
| ! | CAGGATTTTTGTGAGTGACA+TGG | - | chr8.4:26210070-26210089 | None:intergenic | 40.0% |
| ! | CGATTTGTTCGAGAAGAACA+AGG | + | chr8.4:26208859-26208878 | MS.gene99224:CDS | 40.0% |
| ! | GTCACTTACTTTGGAAACCT+TGG | - | chr8.4:26212627-26212646 | None:intergenic | 40.0% |
| ! | GTGTAATTCTAAAGACGAGC+TGG | + | chr8.4:26208526-26208545 | MS.gene99224:CDS | 40.0% |
| ! | TCTTGTTTCGGGCATATTAG+AGG | - | chr8.4:26212046-26212065 | None:intergenic | 40.0% |
| ! | TGGAAGGGATGTTTTCATGT+TGG | - | chr8.4:26212855-26212874 | None:intergenic | 40.0% |
| !! | AGAGTGTTGCTAAATCCTAC+AGG | + | chr8.4:26212340-26212359 | MS.gene99224:intron | 40.0% |
| !! | GATGATAGGTCATTTTGCAG+GGG | + | chr8.4:26210676-26210695 | MS.gene99224:CDS | 40.0% |
| !! | GGATGATAGGTCATTTTGCA+GGG | + | chr8.4:26210675-26210694 | MS.gene99224:CDS | 40.0% |
| !! | GTCCTTAACGGATCAACTTT+TGG | + | chr8.4:26210904-26210923 | MS.gene99224:CDS | 40.0% |
| !! | TCTGATGACTTTTTCCTCCA+AGG | - | chr8.4:26207987-26208006 | None:intergenic | 40.0% |
| !! | TTAATTCTGAAGCTGCCTCT+AGG | - | chr8.4:26211903-26211922 | None:intergenic | 40.0% |
| !!! | CCAACTCCTTTTCAAGTACT+CGG | - | chr8.4:26209149-26209168 | None:intergenic | 40.0% |
| !!! | CGTTTTTGTTGTTGTGATGG+TGG | - | chr8.4:26212522-26212541 | None:intergenic | 40.0% |
| !!! | TTTTGTTGTTGTGATGGTGG+TGG | - | chr8.4:26212519-26212538 | None:intergenic | 40.0% |
| AAAAGGGATGCATCCTTTGG+TGG | - | chr8.4:26212452-26212471 | None:intergenic | 45.0% | |
| AACAGCCGCTTCAGAAAAGT+TGG | + | chr8.4:26212373-26212392 | MS.gene99224:intron | 45.0% | |
| AAGAGAGAGAATTTGGCCGT+CGG | + | chr8.4:26209181-26209200 | MS.gene99224:CDS | 45.0% | |
| AAGCGCGTGTACCTAAAACA+CGG | - | chr8.4:26208435-26208454 | None:intergenic | 45.0% | |
| AAGGTCTGGATGAAGCTTTG+CGG | + | chr8.4:26208767-26208786 | MS.gene99224:CDS | 45.0% | |
| AATCTAGATCCGTGCGTCTT+TGG | + | chr8.4:26210134-26210153 | MS.gene99224:CDS | 45.0% | |
| ACTACATCCTGAAGCCAACT+GGG | - | chr8.4:26210026-26210045 | None:intergenic | 45.0% | |
| AGCGAAAGTGAAGCAGAGTT+TGG | + | chr8.4:26210653-26210672 | MS.gene99224:CDS | 45.0% | |
| ATCCGTGACAAGTAAAAGGC+TGG | + | chr8.4:26208957-26208976 | MS.gene99224:CDS | 45.0% | |
| ATGCCAAAGAGAACTCGCAA+AGG | - | chr8.4:26209653-26209672 | None:intergenic | 45.0% | |
| ATTCTTCTATTGGGAGTCCC+AGG | - | chr8.4:26209435-26209454 | None:intergenic | 45.0% | |
| CAGTGAGAGTCATATTACCG+TGG | - | chr8.4:26211862-26211881 | None:intergenic | 45.0% | |
| CCGAGTACTTGAAAAGGAGT+TGG | + | chr8.4:26209146-26209165 | MS.gene99224:CDS | 45.0% | |
| CTGCTTCCCAAGATTAAGGA+TGG | - | chr8.4:26212414-26212433 | None:intergenic | 45.0% | |
| CTGTTATCTCCAAGTCCTGT+AGG | - | chr8.4:26212358-26212377 | None:intergenic | 45.0% | |
| CTTCAGAGCTCCATCCAAAT+GGG | - | chr8.4:26208821-26208840 | None:intergenic | 45.0% | |
| GAAAGAGTAGCCCATTTGGA+TGG | + | chr8.4:26208808-26208827 | MS.gene99224:CDS | 45.0% | |
| GAAATCGAAGCCCCTAATTC+AGG | + | chr8.4:26212165-26212184 | MS.gene99224:intron | 45.0% | |
| GAAGGAACCAAATCATGGTG+CGG | - | chr8.4:26211587-26211606 | None:intergenic | 45.0% | |
| GAATTATCACAATCCACGGC+AGG | - | chr8.4:26210344-26210363 | None:intergenic | 45.0% | |
| GACTACCCCTGATCACATTT+CGG | + | chr8.4:26209944-26209963 | MS.gene99224:CDS | 45.0% | |
| GAGATGTCCGAAATGTGATC+AGG | - | chr8.4:26209954-26209973 | None:intergenic | 45.0% | |
| GAGTTGCAATTCCAGACATC+TGG | - | chr8.4:26211143-26211162 | None:intergenic | 45.0% | |
| GATATTGCCGCACCATGATT+TGG | + | chr8.4:26211577-26211596 | MS.gene99224:intron | 45.0% | |
| GATGTCCGAAATGTGATCAG+GGG | - | chr8.4:26209952-26209971 | None:intergenic | 45.0% | |
| GCGAAAGTGAAGCAGAGTTT+GGG | + | chr8.4:26210654-26210673 | MS.gene99224:CDS | 45.0% | |
| GGCTTCAATCAGCTACTGAT+AGG | + | chr8.4:26210876-26210895 | MS.gene99224:CDS | 45.0% | |
| GGTTCCTTCTGGTAGATGAT+TGG | + | chr8.4:26211598-26211617 | MS.gene99224:intron | 45.0% | |
| GTCTACATAGAAGCTCCTAG+AGG | + | chr8.4:26211885-26211904 | MS.gene99224:intron | 45.0% | |
| TACTACATCCTGAAGCCAAC+TGG | - | chr8.4:26210027-26210046 | None:intergenic | 45.0% | |
| TCAGCTGCTTCCCAAGATTA+AGG | - | chr8.4:26212418-26212437 | None:intergenic | 45.0% | |
| TCATAACTTTCAGGGGAGCA+GGG | - | chr8.4:26212553-26212572 | None:intergenic | 45.0% | |
| TCCAGAGGTTGTATAATGCC+TGG | - | chr8.4:26212674-26212693 | None:intergenic | 45.0% | |
| TCCAGGCATTATACAACCTC+TGG | + | chr8.4:26212670-26212689 | MS.gene99224:CDS | 45.0% | |
| TGAAATCAATGCAGAAGCCG+AGG | - | chr8.4:26209721-26209740 | None:intergenic | 45.0% | |
| TGAGGTCCGAGTACTTGAAA+AGG | + | chr8.4:26209140-26209159 | MS.gene99224:CDS | 45.0% | |
| TTAATCTTGGGAAGCAGCTG+AGG | + | chr8.4:26212417-26212436 | MS.gene99224:intron | 45.0% | |
| TTCATAACTTTCAGGGGAGC+AGG | - | chr8.4:26212554-26212573 | None:intergenic | 45.0% | |
| TTCGAGAAGAACAAGGGCAA+AGG | + | chr8.4:26208866-26208885 | MS.gene99224:CDS | 45.0% | |
| ! | AAAAGAGTGCATGGTTTGGG+AGG | + | chr8.4:26208927-26208946 | MS.gene99224:CDS | 45.0% |
| ! | ACATGGTCCGTGTTTTCCAA+TGG | + | chr8.4:26210429-26210448 | MS.gene99224:CDS | 45.0% |
| ! | GAAATAGTCTTGGCGCAAGT+TGG | + | chr8.4:26211833-26211852 | MS.gene99224:intron | 45.0% |
| ! | GAAGCAGAGTTTGGGATGAT+AGG | + | chr8.4:26210662-26210681 | MS.gene99224:CDS | 45.0% |
| ! | TAACATTCCCAGTTGGCTTC+AGG | + | chr8.4:26210016-26210035 | MS.gene99224:CDS | 45.0% |
| ! | TGCCAGCCTTTTACTTGTCA+CGG | - | chr8.4:26208962-26208981 | None:intergenic | 45.0% |
| ! | TTCGCAATGGCTTGTCTTTC+TGG | - | chr8.4:26211314-26211333 | None:intergenic | 45.0% |
| ! | TTTGGTTCCGACAAAGTCTC+TGG | + | chr8.4:26210152-26210171 | MS.gene99224:CDS | 45.0% |
| !! | CACCATGATTTGGTTCCTTC+TGG | + | chr8.4:26211587-26211606 | MS.gene99224:intron | 45.0% |
| !! | CTCTGCCAACTTTTCTGAAG+CGG | - | chr8.4:26212381-26212400 | None:intergenic | 45.0% |
| !! | GGGATGATAGGTCATTTTGC+AGG | + | chr8.4:26210674-26210693 | MS.gene99224:CDS | 45.0% |
| !! | TTCATTTTTGCCAGGGAACC+AGG | - | chr8.4:26209315-26209334 | None:intergenic | 45.0% |
| !!! | GAGTGACATGGTTTTGTTCC+AGG | - | chr8.4:26210058-26210077 | None:intergenic | 45.0% |
| AAGAATCAACTTGCCTGCCG+TGG | + | chr8.4:26210328-26210347 | MS.gene99224:CDS | 50.0% | |
| AGGTCTGGATGAAGCTTTGC+GGG | + | chr8.4:26208768-26208787 | MS.gene99224:CDS | 50.0% | |
| ATACCTACAGGCTACTGCCT+TGG | + | chr8.4:26211629-26211648 | MS.gene99224:intron | 50.0% | |
| ATGTCAGAGATTGCGCCTTC+TGG | + | chr8.4:26209269-26209288 | MS.gene99224:CDS | 50.0% | |
| ATTGCACAAGAAGCAGTGGC+AGG | + | chr8.4:26208566-26208585 | MS.gene99224:CDS | 50.0% | |
| CCTACTAAGAAACCGGGAAG+CGG | + | chr8.4:26212788-26212807 | MS.gene99224:CDS | 50.0% | |
| CCTTCAGAGCTCCATCCAAA+TGG | - | chr8.4:26208822-26208841 | None:intergenic | 50.0% | |
| GAGAAACATCAGCTGTCCGA+CGG | - | chr8.4:26209200-26209219 | None:intergenic | 50.0% | |
| GGAGTCACGGTCACTTACTT+TGG | - | chr8.4:26212636-26212655 | None:intergenic | 50.0% | |
| GGGGCGGAATTAAAAGAGGT+CGG | + | chr8.4:26211052-26211071 | MS.gene99224:CDS | 50.0% | |
| GTAACCGTTTCCGAACCAGA+AGG | - | chr8.4:26209287-26209306 | None:intergenic | 50.0% | |
| GTTCTCAGCATGCCAAAGGA+GGG | + | chr8.4:26211270-26211289 | MS.gene99224:intron | 50.0% | |
| TCATGGTTTGAGCCCTCCTT+TGG | - | chr8.4:26211285-26211304 | None:intergenic | 50.0% | |
| TGAAGCTCCAATGCTTCTGC+AGG | - | chr8.4:26209787-26209806 | None:intergenic | 50.0% | |
| TGAAGCTTTGCGGGACAGAT+TGG | + | chr8.4:26208777-26208796 | MS.gene99224:CDS | 50.0% | |
| TGATGCACAGCATAAAGGGG+CGG | + | chr8.4:26211036-26211055 | MS.gene99224:CDS | 50.0% | |
| TGGATCAAAAACCGTGGCCT+TGG | + | chr8.4:26207967-26207986 | MS.gene99224:CDS | 50.0% | |
| TGTTCTCAGCATGCCAAAGG+AGG | + | chr8.4:26211269-26211288 | MS.gene99224:intron | 50.0% | |
| TTCCACAAACTTCCGCTTCC+CGG | - | chr8.4:26212803-26212822 | None:intergenic | 50.0% | |
| TTGTCGGAACCAAAGACGCA+CGG | - | chr8.4:26210146-26210165 | None:intergenic | 50.0% | |
| ! | AGAGATTGCGCCTTCTGGTT+CGG | + | chr8.4:26209274-26209293 | MS.gene99224:CDS | 50.0% |
| ! | AGAGGTCGGTCTCAAGGTTT+TGG | + | chr8.4:26211066-26211085 | MS.gene99224:CDS | 50.0% |
| ! | ATCAAAAACCGTGGCCTTGG+AGG | + | chr8.4:26207970-26207989 | MS.gene99224:CDS | 50.0% |
| ! | CCATTTGGATGGAGCTCTGA+AGG | + | chr8.4:26208819-26208838 | MS.gene99224:CDS | 50.0% |
| ! | GATTCGGAGCACTTCAGAAG+TGG | + | chr8.4:26209741-26209760 | MS.gene99224:CDS | 50.0% |
| ! | TCATGGTCCTGCAGAAGCAT+TGG | + | chr8.4:26209777-26209796 | MS.gene99224:CDS | 50.0% |
| !! | GAAGTGTTGTCGGTGAAGCA+AGG | + | chr8.4:26208748-26208767 | MS.gene99224:CDS | 50.0% |
| !! | GACTTTTTCCTCCAAGGCCA+CGG | - | chr8.4:26207981-26208000 | None:intergenic | 50.0% |
| !! | GTCTTCGTGAGCTTGCTGTT+TGG | - | chr8.4:26210270-26210289 | None:intergenic | 50.0% |
| !! | GTGGTGGATGTGGTACTGAT+AGG | - | chr8.4:26212497-26212516 | None:intergenic | 50.0% |
| !! | TGTTGTTGTGATGGTGGTGG+TGG | - | chr8.4:26212516-26212535 | None:intergenic | 50.0% |
| !! | TTGGCGCAAGTTGGTTTCCA+CGG | + | chr8.4:26211842-26211861 | MS.gene99224:intron | 50.0% |
| AACCGGGAAGCGGAAGTTTG+TGG | + | chr8.4:26212798-26212817 | MS.gene99224:CDS | 55.0% | |
| ACTTTCAGGGGAGCAGGGAT+AGG | - | chr8.4:26212548-26212567 | None:intergenic | 55.0% | |
| CCGCTTCCCGGTTTCTTAGT+AGG | - | chr8.4:26212791-26212810 | None:intergenic | 55.0% | |
| GAACCAAGGCAGTAGCCTGT+AGG | - | chr8.4:26211635-26211654 | None:intergenic | 55.0% | |
| GTTGTCGGTGAAGCAAGGTC+TGG | + | chr8.4:26208753-26208772 | MS.gene99224:CDS | 55.0% | |
| TCCGATCTCACCACCATTCC+AGG | + | chr8.4:26212653-26212672 | MS.gene99224:CDS | 55.0% | |
| TGGGAAGCAGCTGAGGTCAT+TGG | + | chr8.4:26212424-26212443 | MS.gene99224:intron | 55.0% | |
| ! | GCCTGGAATGGTGGTGAGAT+CGG | - | chr8.4:26212657-26212676 | None:intergenic | 55.0% |
| ! | TGGTGGTGAGATCGGAGTCA+CGG | - | chr8.4:26212649-26212668 | None:intergenic | 55.0% |
| !! | AGGAATGCCAACGGGCTACA+TGG | + | chr8.4:26210412-26210431 | MS.gene99224:CDS | 55.0% |
| !! | CTGGTTCGGAAACGGTTACC+AGG | + | chr8.4:26209288-26209307 | MS.gene99224:CDS | 55.0% |
| !! | GAGGTCATTGGCTCCACCAA+AGG | + | chr8.4:26212436-26212455 | MS.gene99224:intron | 55.0% |
| !! | GGTTAGCTGTGCTGACTCCT+CGG | + | chr8.4:26209701-26209720 | MS.gene99224:CDS | 55.0% |
| !! | TGCGCCTTCTGGTTCGGAAA+CGG | + | chr8.4:26209280-26209299 | MS.gene99224:CDS | 55.0% |
| !! | TGTTGTGATGGTGGTGGTGG+TGG | - | chr8.4:26212513-26212532 | None:intergenic | 55.0% |
| ACACGGACCATGTAGCCCGT+TGG | - | chr8.4:26210422-26210441 | None:intergenic | 60.0% | |
| CGGAAACGGTTACCAGGTCC+TGG | + | chr8.4:26209294-26209313 | MS.gene99224:CDS | 60.0% | |
| GTTACCAGGTCCTGGTTCCC+TGG | + | chr8.4:26209302-26209321 | MS.gene99224:CDS | 60.0% | |
| TTTGCCAGGGAACCAGGACC+TGG | - | chr8.4:26209309-26209328 | None:intergenic | 60.0% | |
| !! | GATGGTGGTGGTGGTGGATG+TGG | - | chr8.4:26212507-26212526 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 26207966 | 26212886 | 26207966 | ID=MS.gene99224 |
| chr8.4 | mRNA | 26207966 | 26212886 | 26207966 | ID=MS.gene99224.t1;Parent=MS.gene99224 |
| chr8.4 | exon | 26207966 | 26208061 | 26207966 | ID=MS.gene99224.t1.exon1;Parent=MS.gene99224.t1 |
| chr8.4 | CDS | 26207966 | 26208061 | 26207966 | ID=cds.MS.gene99224.t1;Parent=MS.gene99224.t1 |
| chr8.4 | exon | 26208443 | 26208587 | 26208443 | ID=MS.gene99224.t1.exon2;Parent=MS.gene99224.t1 |
| chr8.4 | CDS | 26208443 | 26208587 | 26208443 | ID=cds.MS.gene99224.t1;Parent=MS.gene99224.t1 |
| chr8.4 | exon | 26208728 | 26211173 | 26208728 | ID=MS.gene99224.t1.exon3;Parent=MS.gene99224.t1 |
| chr8.4 | CDS | 26208728 | 26211173 | 26208728 | ID=cds.MS.gene99224.t1;Parent=MS.gene99224.t1 |
| chr8.4 | exon | 26211278 | 26211335 | 26211278 | ID=MS.gene99224.t1.exon4;Parent=MS.gene99224.t1 |
| chr8.4 | CDS | 26211278 | 26211335 | 26211278 | ID=cds.MS.gene99224.t1;Parent=MS.gene99224.t1 |
| chr8.4 | exon | 26212599 | 26212886 | 26212599 | ID=MS.gene99224.t1.exon5;Parent=MS.gene99224.t1 |
| chr8.4 | CDS | 26212599 | 26212886 | 26212599 | ID=cds.MS.gene99224.t1;Parent=MS.gene99224.t1 |
| Gene Sequence |
| Protein sequence |
