Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene99547 | 0.805604 | 1.23E-49 | -1.69E-46 |
| MS.gene049254 | MS.gene99547 | 0.804585 | 2.01E-49 | -1.69E-46 |
| MS.gene049343 | MS.gene99547 | 0.808219 | 3.45E-50 | -1.69E-46 |
| MS.gene049672 | MS.gene99547 | 0.816209 | 6.22E-52 | -1.69E-46 |
| MS.gene049850 | MS.gene99547 | 0.826637 | 2.43E-54 | -1.69E-46 |
| MS.gene050156 | MS.gene99547 | 0.817883 | 2.62E-52 | -1.69E-46 |
| MS.gene050844 | MS.gene99547 | 0.823775 | 1.16E-53 | -1.69E-46 |
| MS.gene051719 | MS.gene99547 | 0.806696 | 7.26E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene99547 | 0.832021 | 1.20E-55 | -1.69E-46 |
| MS.gene052519 | MS.gene99547 | 0.833088 | 6.52E-56 | -1.69E-46 |
| MS.gene052611 | MS.gene99547 | 0.824448 | 8.03E-54 | -1.69E-46 |
| MS.gene052773 | MS.gene99547 | 0.838328 | 3.07E-57 | -1.69E-46 |
| MS.gene052863 | MS.gene99547 | 0.828854 | 7.13E-55 | -1.69E-46 |
| MS.gene053226 | MS.gene99547 | 0.835009 | 2.15E-56 | -1.69E-46 |
| MS.gene053900 | MS.gene99547 | 0.806882 | 6.63E-50 | -1.69E-46 |
| MS.gene05415 | MS.gene99547 | 0.800925 | 1.15E-48 | -1.69E-46 |
| MS.gene054582 | MS.gene99547 | 0.800575 | 1.35E-48 | -1.69E-46 |
| MS.gene054651 | MS.gene99547 | 0.827542 | 1.48E-54 | -1.69E-46 |
| MS.gene055466 | MS.gene99547 | 0.804826 | 1.79E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene99547 | 0.803765 | 2.98E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene99547 | 0.845045 | 5.19E-59 | -1.69E-46 |
| MS.gene056050 | MS.gene99547 | 0.807187 | 5.71E-50 | -1.69E-46 |
| MS.gene056174 | MS.gene99547 | 0.801176 | 1.02E-48 | -1.69E-46 |
| MS.gene056366 | MS.gene99547 | 0.821242 | 4.48E-53 | -1.69E-46 |
| MS.gene056595 | MS.gene99547 | 0.826223 | 3.05E-54 | -1.69E-46 |
| MS.gene057915 | MS.gene99547 | 0.822607 | 2.16E-53 | -1.69E-46 |
| MS.gene058037 | MS.gene99547 | 0.800532 | 1.38E-48 | -1.69E-46 |
| MS.gene058625 | MS.gene99547 | 0.840619 | 7.80E-58 | -1.69E-46 |
| MS.gene058829 | MS.gene99547 | 0.812453 | 4.21E-51 | -1.69E-46 |
| MS.gene058979 | MS.gene99547 | 0.808303 | 3.31E-50 | -1.69E-46 |
| MS.gene059570 | MS.gene99547 | 0.803281 | 3.76E-49 | -1.69E-46 |
| MS.gene059625 | MS.gene99547 | 0.815883 | 7.36E-52 | -1.69E-46 |
| MS.gene060521 | MS.gene99547 | 0.80223 | 6.19E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 10 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATATTCGACGACATCATTT+TGG | 0.189185 | 8.1:-59566183 | MS.gene99547:CDS |
| AGCGATGATGAAAGGAGCTA+TGG | 0.490074 | 8.1:-59568548 | MS.gene99547:CDS |
| ACAATGTCGACTCACTTCTC+AGG | 0.510678 | 8.1:-59566157 | MS.gene99547:intron |
| TATTTCAGATTCAAGAGAAG+CGG | 0.575003 | 8.1:-59568497 | MS.gene99547:intron |
| ATGATGATAGCGATGATGAA+AGG | 0.575051 | 8.1:-59568556 | MS.gene99547:CDS |
| AGCTAAGTGCATCTGTCACA+AGG | 0.583973 | 8.1:-59567954 | MS.gene99547:intron |
| ACTTAGCTCTTTCTTTGACA+AGG | 0.594874 | 8.1:+59567969 | None:intergenic |
| GCGATGATGAAAGGAGCTAT+GGG | 0.602155 | 8.1:-59568547 | MS.gene99547:CDS |
| TCAAGAAGTTGAAGATCACA+AGG | 0.604584 | 8.1:-59568017 | MS.gene99547:intron |
| CAAGAAGTTGAAGATCACAA+GGG | 0.734146 | 8.1:-59568016 | MS.gene99547:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAGACTTTATAATATC+TGG | - | chr8.1:59565563-59565582 | MS.gene99547:intron | 15.0% |
| !! | TTAAGTATTAATCACTATAA+TGG | + | chr8.1:59565744-59565763 | None:intergenic | 15.0% |
| !!! | AAATTTTTAAAATTGCAAAC+AGG | + | chr8.1:59565454-59565473 | None:intergenic | 15.0% |
| !!! | ATAAAGTCTTTTTAATGAAA+AGG | + | chr8.1:59565557-59565576 | None:intergenic | 15.0% |
| !!! | ATAATCTTTGACTTATTTTT+AGG | - | chr8.1:59568544-59568563 | MS.gene99547:CDS | 15.0% |
| !!! | ATATTTTTTTTTCTTTCGAA+TGG | - | chr8.1:59565890-59565909 | MS.gene99547:intron | 15.0% |
| !!! | ATTTTTAGTAATTTTACTGT+AGG | - | chr8.1:59564967-59564986 | MS.gene99547:intron | 15.0% |
| !!! | GCTTTTTCTTTTTTTTTTTT+GGG | - | chr8.1:59566162-59566181 | MS.gene99547:CDS | 15.0% |
| !!! | TATTTTTTTTTCTTTCGAAT+GGG | - | chr8.1:59565891-59565910 | MS.gene99547:intron | 15.0% |
| !!! | TGCTTTTTCTTTTTTTTTTT+TGG | - | chr8.1:59566161-59566180 | MS.gene99547:CDS | 15.0% |
| !!! | TTCTAAAAAATCAAAAGTAT+AGG | + | chr8.1:59567827-59567846 | None:intergenic | 15.0% |
| !!! | TTTTCTTTTTTCAAAGTAAA+AGG | - | chr8.1:59567143-59567162 | MS.gene99547:intron | 15.0% |
| !! | AAAACTTTAATTACTAGATC+AGG | + | chr8.1:59565615-59565634 | None:intergenic | 20.0% |
| !! | AAACTTTAATTACTAGATCA+GGG | + | chr8.1:59565614-59565633 | None:intergenic | 20.0% |
| !! | AGTTAGTTAATTAATCAACA+GGG | - | chr8.1:59567107-59567126 | MS.gene99547:intron | 20.0% |
| !! | ATTATTAAGGATGTTAGTTA+AGG | - | chr8.1:59566648-59566667 | MS.gene99547:intron | 20.0% |
| !! | CATTGAATGAATTCTAATAT+AGG | + | chr8.1:59567425-59567444 | None:intergenic | 20.0% |
| !! | TAAAAAAATTAGTGAAGTGA+AGG | + | chr8.1:59568217-59568236 | None:intergenic | 20.0% |
| !! | TAGTTAGTTAATTAATCAAC+AGG | - | chr8.1:59567106-59567125 | MS.gene99547:intron | 20.0% |
| !! | TCTCAATTTGTAATGAATTT+AGG | - | chr8.1:59565404-59565423 | MS.gene99547:intron | 20.0% |
| !! | TTAAAATTTCCAAGTATCAT+TGG | + | chr8.1:59567352-59567371 | None:intergenic | 20.0% |
| !!! | TTGATATGATAACATTTTAG+TGG | - | chr8.1:59567626-59567645 | MS.gene99547:intron | 20.0% |
| !!! | TTTTTCAAAGTCAAGTTTAA+TGG | - | chr8.1:59564993-59565012 | MS.gene99547:intron | 20.0% |
| !!! | TTTTTCATGCTAATTGTTAA+TGG | - | chr8.1:59565632-59565651 | MS.gene99547:intron | 20.0% |
| ! | AAAAGGAAATCATCAAACAA+GGG | + | chr8.1:59567515-59567534 | None:intergenic | 25.0% |
| ! | AATAAACACGACAATAAAAG+TGG | + | chr8.1:59564890-59564909 | None:intergenic | 25.0% |
| ! | AGAAAGAAGTAAGCTAAATA+AGG | + | chr8.1:59566332-59566351 | None:intergenic | 25.0% |
| ! | AGTTTCAATCATCTGATAAT+TGG | + | chr8.1:59565798-59565817 | None:intergenic | 25.0% |
| ! | ATGAATTATGAATCACTTTG+TGG | - | chr8.1:59568084-59568103 | MS.gene99547:intron | 25.0% |
| ! | ATTCTATACTGTAAGACAAA+AGG | + | chr8.1:59567532-59567551 | None:intergenic | 25.0% |
| ! | ATTGCACTTACATTTAAAAG+AGG | + | chr8.1:59568186-59568205 | None:intergenic | 25.0% |
| ! | CCAAATTAAATAAAATCCAC+AGG | + | chr8.1:59567006-59567025 | None:intergenic | 25.0% |
| ! | GAAAAAAATATAAAGAGCAG+AGG | - | chr8.1:59566394-59566413 | MS.gene99547:intron | 25.0% |
| ! | GAAAGAAGTAAGCTAAATAA+GGG | + | chr8.1:59566331-59566350 | None:intergenic | 25.0% |
| ! | GTGTATATGTGAACAAATAA+AGG | - | chr8.1:59566939-59566958 | MS.gene99547:intron | 25.0% |
| ! | TAAACAAAAAACGAATCTCT+AGG | + | chr8.1:59567329-59567348 | None:intergenic | 25.0% |
| ! | TAATGTATGAGATTTCATGT+TGG | - | chr8.1:59566735-59566754 | MS.gene99547:intron | 25.0% |
| ! | TAGATCATTAGGTGTAATTA+TGG | - | chr8.1:59566067-59566086 | MS.gene99547:intron | 25.0% |
| ! | TCACATTGAATGCAATTAAT+TGG | - | chr8.1:59568363-59568382 | MS.gene99547:intron | 25.0% |
| ! | TCTCTGTAATAAATAGCTAA+TGG | - | chr8.1:59568397-59568416 | MS.gene99547:intron | 25.0% |
| ! | TGAAAAAGAATGAGACAAAA+TGG | + | chr8.1:59565708-59565727 | None:intergenic | 25.0% |
| ! | TTCATGAATCTTAATTAGAC+TGG | - | chr8.1:59565330-59565349 | MS.gene99547:intron | 25.0% |
| ! | TTGCACTTACATTTAAAAGA+GGG | + | chr8.1:59568185-59568204 | None:intergenic | 25.0% |
| ! | TTTGTCAAAAATAACCACTA+TGG | + | chr8.1:59568428-59568447 | None:intergenic | 25.0% |
| !! | AATTGTTAATGGTACTGAAT+TGG | - | chr8.1:59565643-59565662 | MS.gene99547:intron | 25.0% |
| !! | CTATAACTTGTGTTCTATTT+AGG | - | chr8.1:59566126-59566145 | MS.gene99547:intron | 25.0% |
| !! | TATTTTGCAAATAGATCTTG+TGG | - | chr8.1:59568125-59568144 | MS.gene99547:intron | 25.0% |
| !!! | ATCTTTGACTTATTTTTAGG+CGG | - | chr8.1:59568547-59568566 | MS.gene99547:CDS | 25.0% |
| !!! | CCTGTGGATTTTATTTAATT+TGG | - | chr8.1:59567003-59567022 | MS.gene99547:intron | 25.0% |
| !!! | GAATTTAGGTTTTAGAATCT+AGG | - | chr8.1:59565418-59565437 | MS.gene99547:intron | 25.0% |
| !!! | GAATTTTTTGCTTAAGACTT+TGG | - | chr8.1:59567464-59567483 | MS.gene99547:intron | 25.0% |
| !!! | TATGATAACATTTTAGTGGT+TGG | - | chr8.1:59567630-59567649 | MS.gene99547:intron | 25.0% |
| !!! | TATTTTTGAAAATCAGTACG+AGG | + | chr8.1:59564724-59564743 | None:intergenic | 25.0% |
| !!! | TTTTGTTTACCAATGATACT+TGG | - | chr8.1:59567340-59567359 | MS.gene99547:intron | 25.0% |
| AACTAAATCTGCAATTCTCA+AGG | - | chr8.1:59566912-59566931 | MS.gene99547:intron | 30.0% | |
| AAGATGCAAAGAGATAGAAA+CGG | + | chr8.1:59566248-59566267 | None:intergenic | 30.0% | |
| AATAAAATCCACAGGTACAT+TGG | + | chr8.1:59566998-59567017 | None:intergenic | 30.0% | |
| AGCTCATCAAGATTTAAACT+TGG | - | chr8.1:59566371-59566390 | MS.gene99547:intron | 30.0% | |
| ATCATTAGGTGTAATTATGG+TGG | - | chr8.1:59566070-59566089 | MS.gene99547:intron | 30.0% | |
| CAAAAGGAAATCATCAAACA+AGG | + | chr8.1:59567516-59567535 | None:intergenic | 30.0% | |
| GCTCATCAAGATTTAAACTT+GGG | - | chr8.1:59566372-59566391 | MS.gene99547:intron | 30.0% | |
| GGATTGCCATATTCAATAAT+TGG | - | chr8.1:59567485-59567504 | MS.gene99547:intron | 30.0% | |
| GGTGTACCAATTATTGAATA+TGG | + | chr8.1:59567494-59567513 | None:intergenic | 30.0% | |
| GTAGATCATTTCAACCAATT+TGG | - | chr8.1:59565037-59565056 | MS.gene99547:intron | 30.0% | |
| TAAAACTTTCCCTAAAGTGA+AGG | - | chr8.1:59564920-59564939 | MS.gene99547:intron | 30.0% | |
| TAGAAACGGAAGAAATACAA+CGG | + | chr8.1:59566234-59566253 | None:intergenic | 30.0% | |
| TAGACTGTTCATGAATCTTA+CGG | - | chr8.1:59565359-59565378 | MS.gene99547:intron | 30.0% | |
| TATTTCAGATTCAAGAGAAG+CGG | - | chr8.1:59564742-59564761 | MS.gene99547:intron | 30.0% | |
| TGAGTTGTTGATATAGCATA+AGG | - | chr8.1:59566765-59566784 | MS.gene99547:intron | 30.0% | |
| TGTATGAACAATTGTAGAGT+AGG | - | chr8.1:59565516-59565535 | MS.gene99547:intron | 30.0% | |
| TTATCACTAAGACATACTAG+AGG | - | chr8.1:59565838-59565857 | MS.gene99547:intron | 30.0% | |
| TTCAATGTCATTGTCATATG+TGG | - | chr8.1:59567438-59567457 | MS.gene99547:intron | 30.0% | |
| TTGAGTTCCTTCACTAAATT+TGG | - | chr8.1:59568241-59568260 | MS.gene99547:intron | 30.0% | |
| TTTACTGCTGTATATTTGTG+CGG | - | chr8.1:59567890-59567909 | MS.gene99547:intron | 30.0% | |
| ! | ATCTAAGTTTTGCAATGTGT+TGG | - | chr8.1:59567269-59567288 | MS.gene99547:intron | 30.0% |
| ! | CAGAAACATGTTTTGTGTAT+TGG | + | chr8.1:59567738-59567757 | None:intergenic | 30.0% |
| ! | GATAATATTGGCTGATTCAA+AGG | - | chr8.1:59566283-59566302 | MS.gene99547:intron | 30.0% |
| ! | TGGTCTTGCTAACATTATTA+AGG | - | chr8.1:59566635-59566654 | MS.gene99547:intron | 30.0% |
| ! | TGTTTTGTGTATTGGATACT+TGG | + | chr8.1:59567730-59567749 | None:intergenic | 30.0% |
| ! | TTAAGGCACATTTTATGTGA+TGG | - | chr8.1:59566665-59566684 | MS.gene99547:intron | 30.0% |
| ! | TTTTAAGCGTTAACATACAC+TGG | + | chr8.1:59566553-59566572 | None:intergenic | 30.0% |
| !! | ATTTCATTAGCCTTCACTTT+AGG | + | chr8.1:59564933-59564952 | None:intergenic | 30.0% |
| !! | CACTTTAGGGAAAGTTTTAA+AGG | + | chr8.1:59564919-59564938 | None:intergenic | 30.0% |
| !! | GAATTGCAGATTTAGTTTGA+AGG | + | chr8.1:59566909-59566928 | None:intergenic | 30.0% |
| !! | TTTCATTAGCCTTCACTTTA+GGG | + | chr8.1:59564932-59564951 | None:intergenic | 30.0% |
| !!! | TTTGAGTTTTGAAGTAGTCA+TGG | - | chr8.1:59564782-59564801 | MS.gene99547:intron | 30.0% |
| AAAGGGAAGCAATCAAAACA+AGG | + | chr8.1:59568021-59568040 | None:intergenic | 35.0% | |
| AACTTGTGTTCTATTTAGGC+TGG | - | chr8.1:59566130-59566149 | MS.gene99547:intron | 35.0% | |
| AAGATTACCACACTAGAACA+AGG | + | chr8.1:59567566-59567585 | None:intergenic | 35.0% | |
| AAGTGAAGGCTAATGAAATG+AGG | - | chr8.1:59564934-59564953 | MS.gene99547:intron | 35.0% | |
| AGATTACCACACTAGAACAA+GGG | + | chr8.1:59567565-59567584 | None:intergenic | 35.0% | |
| AGCAATCAAAACAAGGCAAT+AGG | + | chr8.1:59568014-59568033 | None:intergenic | 35.0% | |
| AGCTAATGGTTATTCCATAG+TGG | - | chr8.1:59568411-59568430 | MS.gene99547:intron | 35.0% | |
| AGTTCCTTCACTAAATTTGG+AGG | - | chr8.1:59568244-59568263 | MS.gene99547:intron | 35.0% | |
| ATGCTATGTGTAGTTTATGC+TGG | - | chr8.1:59566582-59566601 | MS.gene99547:intron | 35.0% | |
| ATGTATTGTTGTGTGACCAA+AGG | + | chr8.1:59568039-59568058 | None:intergenic | 35.0% | |
| CAAGAAGTTGAAGATCACAA+GGG | - | chr8.1:59565223-59565242 | MS.gene99547:intron | 35.0% | |
| CTATCTCTTTGCATCTTTCA+GGG | - | chr8.1:59566251-59566270 | MS.gene99547:intron | 35.0% | |
| CTCTATCTGAGTGGAATATT+AGG | + | chr8.1:59567386-59567405 | None:intergenic | 35.0% | |
| GTATAGATTGCAAACTTCTC+AGG | - | chr8.1:59567303-59567322 | MS.gene99547:intron | 35.0% | |
| GTTCCTTCACTAAATTTGGA+GGG | - | chr8.1:59568245-59568264 | MS.gene99547:intron | 35.0% | |
| TAATCAACAGGGTTTGTGTT+GGG | - | chr8.1:59567118-59567137 | MS.gene99547:intron | 35.0% | |
| TAATTCATGTTCACCACTCT+CGG | + | chr8.1:59568072-59568091 | None:intergenic | 35.0% | |
| TATCTCTTTGCATCTTTCAG+GGG | - | chr8.1:59566252-59566271 | MS.gene99547:intron | 35.0% | |
| TCAAGAAGTTGAAGATCACA+AGG | - | chr8.1:59565222-59565241 | MS.gene99547:intron | 35.0% | |
| TCTATCTCTTTGCATCTTTC+AGG | - | chr8.1:59566250-59566269 | MS.gene99547:intron | 35.0% | |
| TGTAACAGAAAGCTAAGTCA+GGG | + | chr8.1:59567208-59567227 | None:intergenic | 35.0% | |
| TGTATTGTTGTGTGACCAAA+GGG | + | chr8.1:59568038-59568057 | None:intergenic | 35.0% | |
| TGTGTATTGGATACTTGGTT+TGG | + | chr8.1:59567725-59567744 | None:intergenic | 35.0% | |
| TTAATCAACAGGGTTTGTGT+TGG | - | chr8.1:59567117-59567136 | MS.gene99547:intron | 35.0% | |
| TTGTAACAGAAAGCTAAGTC+AGG | + | chr8.1:59567209-59567228 | None:intergenic | 35.0% | |
| TTTAAAAGAGGGTGACTACA+AGG | + | chr8.1:59568174-59568193 | None:intergenic | 35.0% | |
| ! | AACATATAGCTCTATCTGAG+TGG | + | chr8.1:59567395-59567414 | None:intergenic | 35.0% |
| ! | ACTTAGCTCTTTCTTTGACA+AGG | + | chr8.1:59565273-59565292 | None:intergenic | 35.0% |
| ! | ATGATGATAGCGATGATGAA+AGG | - | chr8.1:59564683-59564702 | MS.gene99547:intron | 35.0% |
| ! | GAATTGGTTGATTTAGTAGC+TGG | - | chr8.1:59565659-59565678 | MS.gene99547:intron | 35.0% |
| ! | GATATTCGACGACATCATTT+TGG | - | chr8.1:59567056-59567075 | MS.gene99547:intron | 35.0% |
| ! | TAAACTTCCTGTTTCTTGCT+TGG | - | chr8.1:59566850-59566869 | MS.gene99547:intron | 35.0% |
| ! | TTGGCTGATTCAAAGGAAAA+AGG | - | chr8.1:59566290-59566309 | MS.gene99547:intron | 35.0% |
| ! | TTTTAAACTCTCTGTCGTAG+AGG | - | chr8.1:59567958-59567977 | MS.gene99547:CDS | 35.0% |
| ! | TTTTATGCTGAAACTGTGTG+TGG | - | chr8.1:59566615-59566634 | MS.gene99547:intron | 35.0% |
| !! | AGACTGGTGTTTTGAATGAA+AGG | - | chr8.1:59568323-59568342 | MS.gene99547:intron | 35.0% |
| !! | GACTGGTGTTTTGAATGAAA+GGG | - | chr8.1:59568324-59568343 | MS.gene99547:intron | 35.0% |
| !!! | TTGTTTTGATTGCTTCCCTT+TGG | - | chr8.1:59568020-59568039 | MS.gene99547:intron | 35.0% |
| AACAGTTCAGCAAACACAAG+TGG | + | chr8.1:59565181-59565200 | None:intergenic | 40.0% | |
| AAGTCAGGGAATTATCTGCA+AGG | + | chr8.1:59567194-59567213 | None:intergenic | 40.0% | |
| AATTCATGTTCACCACTCTC+GGG | + | chr8.1:59568071-59568090 | None:intergenic | 40.0% | |
| ACAAACTAGAGGACTGTGTT+AGG | - | chr8.1:59565916-59565935 | MS.gene99547:intron | 40.0% | |
| ATATCTCATGTACCAGCCAA+GGG | - | chr8.1:59566522-59566541 | MS.gene99547:intron | 40.0% | |
| ATCACTTTGTGGAGCTTTCT+TGG | - | chr8.1:59568095-59568114 | MS.gene99547:intron | 40.0% | |
| ATGTCATTGTCATATGTGGC+TGG | - | chr8.1:59567442-59567461 | MS.gene99547:intron | 40.0% | |
| CATCTGTCACAAGGTAAGAT+TGG | - | chr8.1:59565294-59565313 | MS.gene99547:intron | 40.0% | |
| CTAAACACCAAGCAAGAAAC+AGG | + | chr8.1:59566860-59566879 | None:intergenic | 40.0% | |
| CTTCCTGTTCTACTCCAAAT+TGG | + | chr8.1:59565054-59565073 | None:intergenic | 40.0% | |
| GAACCCTCCAAATTTAGTGA+AGG | + | chr8.1:59568251-59568270 | None:intergenic | 40.0% | |
| TAAATCTTGATGAGCTGCAC+AGG | + | chr8.1:59566367-59566386 | None:intergenic | 40.0% | |
| TATATCTCATGTACCAGCCA+AGG | - | chr8.1:59566521-59566540 | MS.gene99547:intron | 40.0% | |
| TATCATCACCAATGTACCTG+TGG | - | chr8.1:59566987-59567006 | MS.gene99547:intron | 40.0% | |
| TCACACAACAATACATGCTG+AGG | - | chr8.1:59568043-59568062 | MS.gene99547:intron | 40.0% | |
| TTGAGTTCAAGCAAAACTCC+AGG | + | chr8.1:59568304-59568323 | None:intergenic | 40.0% | |
| ! | CAACCAATTTGGAGTAGAAC+AGG | - | chr8.1:59565048-59565067 | MS.gene99547:intron | 40.0% |
| ! | GTTTTGCTTGAACTCAAGAC+TGG | - | chr8.1:59568307-59568326 | MS.gene99547:intron | 40.0% |
| ! | TGTGTTTGCTGAACTGTTGT+AGG | - | chr8.1:59565183-59565202 | MS.gene99547:intron | 40.0% |
| ! | TTTTTCCTTGATGTGCAGTG+CGG | - | chr8.1:59566016-59566035 | MS.gene99547:intron | 40.0% |
| !! | GCAATCTAGAGGTGTTAATC+CGG | - | chr8.1:59566094-59566113 | MS.gene99547:intron | 40.0% |
| !! | GTCTGTTTTCTTGTCGTTTG+TGG | - | chr8.1:59567912-59567931 | MS.gene99547:intron | 40.0% |
| !! | TGTGCTACTTCTGTGTTGTT+GGG | - | chr8.1:59566187-59566206 | MS.gene99547:CDS | 40.0% |
| !!! | CGGTTTTTTCTTTGTTGCGT+GGG | - | chr8.1:59566036-59566055 | MS.gene99547:intron | 40.0% |
| !!! | GGTTTTTTCTTTGTTGCGTG+GGG | - | chr8.1:59566037-59566056 | MS.gene99547:intron | 40.0% |
| !!! | GTTTTTTCTTTGTTGCGTGG+GGG | - | chr8.1:59566038-59566057 | MS.gene99547:intron | 40.0% |
| AAAAACCGCACTGCACATCA+AGG | + | chr8.1:59566024-59566043 | None:intergenic | 45.0% | |
| AAACTCCAGGTACTCCAGTA+TGG | + | chr8.1:59568291-59568310 | None:intergenic | 45.0% | |
| AATATCTCGCTGTACCTGCA+AGG | + | chr8.1:59567042-59567061 | None:intergenic | 45.0% | |
| AATTTGGAGGGTTCAGATGC+TGG | - | chr8.1:59568257-59568276 | MS.gene99547:intron | 45.0% | |
| ACATACACTGGTACATCCCT+TGG | + | chr8.1:59566541-59566560 | None:intergenic | 45.0% | |
| AGCGATGATGAAAGGAGCTA+TGG | - | chr8.1:59564691-59564710 | MS.gene99547:intron | 45.0% | |
| AGCTAAGTGCATCTGTCACA+AGG | - | chr8.1:59565285-59565304 | MS.gene99547:intron | 45.0% | |
| AGGGAATTATCTGCAAGGAG+CGG | + | chr8.1:59567189-59567208 | None:intergenic | 45.0% | |
| AGGTGTTAATCCGGATTGCA+GGG | - | chr8.1:59566103-59566122 | MS.gene99547:intron | 45.0% | |
| CAAGTTATAGCCCTGCAATC+CGG | + | chr8.1:59566116-59566135 | None:intergenic | 45.0% | |
| CGTGTTGTCTCTATCAGACT+TGG | - | chr8.1:59567981-59568000 | MS.gene99547:CDS | 45.0% | |
| CTTACACCCTTGTTCTAGTG+TGG | - | chr8.1:59567556-59567575 | MS.gene99547:intron | 45.0% | |
| GCGATGATGAAAGGAGCTAT+GGG | - | chr8.1:59564692-59564711 | MS.gene99547:intron | 45.0% | |
| GTTGTCTCTATCAGACTTGG+CGG | - | chr8.1:59567984-59568003 | MS.gene99547:CDS | 45.0% | |
| TCGAATGGGACACAAACTAG+AGG | - | chr8.1:59565905-59565924 | MS.gene99547:intron | 45.0% | |
| TTGTCTCTATCAGACTTGGC+GGG | - | chr8.1:59567985-59568004 | MS.gene99547:CDS | 45.0% | |
| ! | ATTATGGTGGCGCAATCTAG+AGG | - | chr8.1:59566083-59566102 | MS.gene99547:intron | 45.0% |
| ! | CTGTTGTGTTGGAGGTTTTG+CGG | - | chr8.1:59565969-59565988 | MS.gene99547:intron | 45.0% |
| ! | GAGGTTTTGCGGGTTTTTGT+GGG | - | chr8.1:59565980-59565999 | MS.gene99547:intron | 45.0% |
| ! | GGGGCTGGTAGTGATAATAT+TGG | - | chr8.1:59566271-59566290 | MS.gene99547:intron | 45.0% |
| ! | TGTTGTGTTGGAGGTTTTGC+GGG | - | chr8.1:59565970-59565989 | MS.gene99547:intron | 45.0% |
| ! | TTCTTGTCGTTTGTGGCCTT+TGG | - | chr8.1:59567919-59567938 | MS.gene99547:intron | 45.0% |
| !! | AATACAACGGTGCCGTGTAT+AGG | + | chr8.1:59566221-59566240 | None:intergenic | 45.0% |
| !! | ACAATGTCGACTCACTTCTC+AGG | - | chr8.1:59567082-59567101 | MS.gene99547:intron | 45.0% |
| !! | CTGTGCTACTTCTGTGTTGT+TGG | - | chr8.1:59566186-59566205 | MS.gene99547:CDS | 45.0% |
| !! | GTGCTACTTCTGTGTTGTTG+GGG | - | chr8.1:59566188-59566207 | MS.gene99547:CDS | 45.0% |
| !!! | GCGGTTTTTTCTTTGTTGCG+TGG | - | chr8.1:59566035-59566054 | MS.gene99547:intron | 45.0% |
| !! | TATATATATATATATATACT+TGG | + | chr8.1:59566467-59566486 | None:intergenic | 5.0% |
| ACAAGCCTCAACCGAACCAA+AGG | + | chr8.1:59567938-59567957 | None:intergenic | 50.0% | |
| CGCAAAACCTCCAACACAAC+AGG | + | chr8.1:59565971-59565990 | None:intergenic | 50.0% | |
| GAATTATCTGCAAGGAGCGG+GGG | + | chr8.1:59567186-59567205 | None:intergenic | 50.0% | |
| GATGAGCTGCACAGGAATGA+AGG | + | chr8.1:59566359-59566378 | None:intergenic | 50.0% | |
| GGAATTATCTGCAAGGAGCG+GGG | + | chr8.1:59567187-59567206 | None:intergenic | 50.0% | |
| GGGAATTATCTGCAAGGAGC+GGG | + | chr8.1:59567188-59567207 | None:intergenic | 50.0% | |
| GGGGGCTGTCATAGATCATT+AGG | - | chr8.1:59566056-59566075 | MS.gene99547:intron | 50.0% | |
| GTCGTTTGTGGCCTTTGGTT+CGG | - | chr8.1:59567924-59567943 | MS.gene99547:intron | 50.0% | |
| TCTTTGCATCTTTCAGGGGC+TGG | - | chr8.1:59566256-59566275 | MS.gene99547:intron | 50.0% | |
| ! | AGCATCCATACTGGAGTACC+TGG | - | chr8.1:59568283-59568302 | MS.gene99547:intron | 50.0% |
| ! | GAGCGGGGGTATAGAGATAT+AGG | + | chr8.1:59567172-59567191 | None:intergenic | 50.0% |
| ! | GAGGTGTTAATCCGGATTGC+AGG | - | chr8.1:59566102-59566121 | MS.gene99547:intron | 50.0% |
| ! | GGAGGTTTTGCGGGTTTTTG+TGG | - | chr8.1:59565979-59565998 | MS.gene99547:intron | 50.0% |
| ! | GTCGCTTTGCATATCCTTGC+AGG | - | chr8.1:59567025-59567044 | MS.gene99547:intron | 50.0% |
| ! | TGCTGGTCTAGCATCCATAC+TGG | - | chr8.1:59568274-59568293 | MS.gene99547:intron | 50.0% |
| ACACTGGTACATCCCTTGGC+TGG | + | chr8.1:59566537-59566556 | None:intergenic | 55.0% | |
| TCAGCTGCTGCCTGTTGTGT+TGG | - | chr8.1:59565958-59565977 | MS.gene99547:intron | 55.0% | |
| !! | ACAACGGTGCCGTGTATAGG+CGG | + | chr8.1:59566218-59566237 | None:intergenic | 55.0% |
| !! | TGTGGCCTTTGGTTCGGTTG+AGG | - | chr8.1:59567930-59567949 | MS.gene99547:intron | 55.0% |
| GCTGCTGCCTGTTGTGTTGG+AGG | - | chr8.1:59565961-59565980 | MS.gene99547:intron | 60.0% | |
| ! | CATGCTGAGGTACCCGAGAG+TGG | - | chr8.1:59568056-59568075 | MS.gene99547:intron | 60.0% |
| ! | GCGGGTTTTTGTGGGTCTGC+TGG | - | chr8.1:59565988-59566007 | MS.gene99547:intron | 60.0% |
| ! | TGGGGTGTCCCGCCTATACA+CGG | - | chr8.1:59566206-59566225 | MS.gene99547:intron | 60.0% |
| !! | CAACGGTGCCGTGTATAGGC+GGG | + | chr8.1:59566217-59566236 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 59564683 | 59568578 | 59564683 | ID=MS.gene99547 |
| chr8.1 | mRNA | 59564683 | 59568578 | 59564683 | ID=MS.gene99547.t1;Parent=MS.gene99547 |
| chr8.1 | exon | 59568498 | 59568578 | 59568498 | ID=MS.gene99547.t1.exon1;Parent=MS.gene99547.t1 |
| chr8.1 | CDS | 59568498 | 59568578 | 59568498 | ID=cds.MS.gene99547.t1;Parent=MS.gene99547.t1 |
| chr8.1 | exon | 59567955 | 59568034 | 59567955 | ID=MS.gene99547.t1.exon2;Parent=MS.gene99547.t1 |
| chr8.1 | CDS | 59567955 | 59568034 | 59567955 | ID=cds.MS.gene99547.t1;Parent=MS.gene99547.t1 |
| chr8.1 | exon | 59566158 | 59566214 | 59566158 | ID=MS.gene99547.t1.exon3;Parent=MS.gene99547.t1 |
| chr8.1 | CDS | 59566158 | 59566214 | 59566158 | ID=cds.MS.gene99547.t1;Parent=MS.gene99547.t1 |
| chr8.1 | exon | 59564683 | 59564695 | 59564683 | ID=MS.gene99547.t1.exon4;Parent=MS.gene99547.t1 |
| chr8.1 | CDS | 59564683 | 59564695 | 59564683 | ID=cds.MS.gene99547.t1;Parent=MS.gene99547.t1 |
| Gene Sequence |
| Protein sequence |
