AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0080048174.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048174.01.T01 MTR_1g042160 55.172 348 115 4 325 671 1 308 1.56e-126 377
MsG0080048174.01.T01 MTR_1g042160 54.516 310 123 5 1 295 1 307 2.59e-109 333
MsG0080048174.01.T01 MTR_7g107200 49.734 376 162 6 325 673 1 376 1.12e-118 360
MsG0080048174.01.T01 MTR_7g107200 30.667 375 178 10 1 295 1 373 7.53e-44 162
MsG0080048174.01.T01 MTR_7g107160 45.628 366 146 10 322 671 115 443 2.91e-82 267
MsG0080048174.01.T01 MTR_7g107160 42.813 327 149 7 3 295 120 442 7.88e-67 226
MsG0080048174.01.T01 MTR_7g107160 60.952 105 41 0 392 496 1 105 1.71e-34 137
MsG0080048174.01.T01 MTR_7g107160 52.586 116 55 0 71 186 1 116 1.92e-33 134
MsG0080048174.01.T01 MTR_7g107170 73.620 163 41 1 517 677 107 269 3.09e-77 248
MsG0080048174.01.T01 MTR_7g107170 63.393 112 40 1 184 295 152 262 7.50e-38 142
MsG0080048174.01.T01 MTR_7g107170 60.920 87 34 0 576 662 1 87 1.23e-24 104
MsG0080048174.01.T01 MTR_7g107170 45.455 110 56 3 200 309 1 106 4.39e-18 85.1
MsG0080048174.01.T01 MTR_8g011730 36.712 365 185 11 335 674 12 355 1.95e-62 212
MsG0080048174.01.T01 MTR_8g011730 35.484 155 94 3 2 153 3 154 6.54e-23 101
MsG0080048174.01.T01 MTR_8g011730 40.385 104 58 3 184 286 253 353 9.03e-17 82.8
MsG0080048174.01.T01 MTR_3g079840 45.070 142 77 1 325 466 44 184 7.95e-37 148
MsG0080048174.01.T01 MTR_3g079840 43.939 132 70 2 13 144 56 183 2.42e-30 128
MsG0080048174.01.T01 MTR_3g079840 45.070 142 77 1 325 466 45 185 7.96e-37 148
MsG0080048174.01.T01 MTR_3g079840 43.939 132 70 2 13 144 57 184 2.34e-30 128
MsG0080048174.01.T01 MTR_5g091450 46.154 130 69 1 337 466 33 161 4.88e-36 145
MsG0080048174.01.T01 MTR_5g091450 40.625 128 73 2 13 140 33 157 9.86e-27 116
MsG0080048174.01.T01 MTR_5g086700 43.885 139 77 1 328 466 52 189 4.36e-35 143
MsG0080048174.01.T01 MTR_5g086700 42.424 132 72 2 13 144 61 188 3.53e-29 124
MsG0080048174.01.T01 MTR_5g086700 43.885 139 77 1 328 466 52 189 4.47e-35 143
MsG0080048174.01.T01 MTR_5g086700 42.424 132 72 2 13 144 61 188 3.59e-29 124
MsG0080048174.01.T01 MTR_1g041240 44.853 136 73 2 330 465 52 185 8.57e-34 139
MsG0080048174.01.T01 MTR_1g041240 42.222 135 73 2 13 147 59 188 6.98e-30 127
MsG0080048174.01.T01 MTR_1g041240 44.853 136 73 2 330 465 51 184 8.64e-34 139
MsG0080048174.01.T01 MTR_1g041240 42.222 135 73 2 13 147 58 187 6.91e-30 127
MsG0080048174.01.T01 MTR_1g041240 44.853 136 73 2 330 465 50 183 8.95e-34 139
MsG0080048174.01.T01 MTR_1g041240 42.222 135 73 2 13 147 57 186 7.09e-30 127
MsG0080048174.01.T01 MTR_5g091180 36.957 138 87 0 325 462 34 171 3.77e-25 111
MsG0080048174.01.T01 MTR_5g091180 41.085 129 71 3 13 140 46 170 2.28e-22 102
MsG0080048174.01.T01 MTR_5g091550 38.583 127 77 1 336 462 18 143 2.21e-23 104
MsG0080048174.01.T01 MTR_5g091550 30.198 202 125 5 7 208 13 198 1.15e-20 96.3
MsG0080048174.01.T01 MTR_5g091550 38.583 127 77 1 336 462 18 143 2.50e-23 104
MsG0080048174.01.T01 MTR_5g091550 30.392 204 127 5 7 208 13 203 1.25e-20 96.3
MsG0080048174.01.T01 MTR_3g106700 33.803 142 87 1 13 147 406 547 1.15e-18 91.7
MsG0080048174.01.T01 MTR_3g106700 33.333 141 84 2 337 467 406 546 1.09e-16 85.1
MsG0080048174.01.T01 MTR_1g044450 35.075 134 82 3 333 465 61 190 2.51e-18 90.1
MsG0080048174.01.T01 MTR_1g044450 29.861 144 89 6 11 151 63 197 1.73e-11 68.2
MsG0080048174.01.T01 MTR_4g123750 32.168 143 88 4 338 471 20 162 1.02e-17 85.1
MsG0080048174.01.T01 MTR_4g123750 31.111 135 87 3 14 142 20 154 5.41e-15 77.0
MsG0080048174.01.T01 MTR_1g073800 30.769 143 96 3 324 465 36 176 2.80e-17 85.5
MsG0080048174.01.T01 MTR_1g073800 29.861 144 91 6 11 151 47 183 5.02e-11 65.9
MsG0080048174.01.T01 MTR_1g073790 33.582 134 84 3 333 465 58 187 3.32e-17 86.7
MsG0080048174.01.T01 MTR_1g073790 29.861 144 89 6 11 151 60 194 5.62e-11 66.6
MsG0080048174.01.T01 MTR_2g034780 39.837 123 69 2 526 646 122 241 1.91e-16 80.5
MsG0080048174.01.T01 MTR_8g006190 31.452 124 80 2 24 142 1 124 2.29e-15 79.3
MsG0080048174.01.T01 MTR_8g006190 34.783 115 69 2 355 463 10 124 3.12e-15 79.0
MsG0080048174.01.T01 MTR_8g006190 32.692 104 65 2 44 142 13 116 9.39e-12 68.2
MsG0080048174.01.T01 MTR_8g006190 33.654 104 63 2 366 463 13 116 3.52e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048174.01.T01 AT5G06600 50.000 142 70 1 325 466 44 184 7.59e-39 154
MsG0080048174.01.T01 AT5G06600 46.970 132 66 2 13 144 56 183 2.90e-31 131
MsG0080048174.01.T01 AT5G06600 50.000 142 70 1 325 466 43 183 1.01e-38 154
MsG0080048174.01.T01 AT5G06600 46.970 132 66 2 13 144 55 182 3.54e-31 131
MsG0080048174.01.T01 AT5G06600 50.000 142 70 1 325 466 44 184 1.01e-38 154
MsG0080048174.01.T01 AT5G06600 46.970 132 66 2 13 144 56 183 3.48e-31 131
MsG0080048174.01.T01 AT3G11910 50.769 130 63 1 337 466 55 183 6.95e-37 149
MsG0080048174.01.T01 AT3G11910 45.455 132 68 2 13 144 55 182 4.15e-30 127
MsG0080048174.01.T01 AT3G11910 50.769 130 63 1 337 466 55 183 6.95e-37 149
MsG0080048174.01.T01 AT3G11910 45.455 132 68 2 13 144 55 182 4.15e-30 127
MsG0080048174.01.T01 AT3G11910 50.769 130 63 1 337 466 54 182 7.26e-37 149
MsG0080048174.01.T01 AT3G11910 45.455 132 68 2 13 144 54 181 4.26e-30 127
MsG0080048174.01.T01 AT3G11910 50.769 130 63 1 337 466 54 182 7.26e-37 149
MsG0080048174.01.T01 AT3G11910 45.455 132 68 2 13 144 54 181 4.26e-30 127
MsG0080048174.01.T01 AT3G58270 40.146 137 81 1 330 466 1 136 4.15e-25 107
MsG0080048174.01.T01 AT3G58270 34.615 130 81 2 13 142 8 133 3.28e-17 84.0
MsG0080048174.01.T01 AT3G58270 40.146 137 81 1 330 466 1 136 4.15e-25 107
MsG0080048174.01.T01 AT3G58270 34.615 130 81 2 13 142 8 133 3.28e-17 84.0
MsG0080048174.01.T01 AT3G58270 40.146 137 81 1 330 466 1 136 4.15e-25 107
MsG0080048174.01.T01 AT3G58270 34.615 130 81 2 13 142 8 133 3.28e-17 84.0
MsG0080048174.01.T01 AT3G58250 32.749 171 109 3 336 500 9 179 1.80e-23 102
MsG0080048174.01.T01 AT3G58250 36.641 131 81 1 12 142 9 137 3.29e-21 95.5
MsG0080048174.01.T01 AT3G58370 35.135 148 94 1 332 477 4 151 8.65e-22 97.1
MsG0080048174.01.T01 AT3G58370 33.846 130 81 3 13 140 9 135 2.25e-13 72.0
MsG0080048174.01.T01 AT3G58340 25.150 334 213 8 330 645 1 315 8.75e-22 97.4
MsG0080048174.01.T01 AT3G58340 35.659 129 79 2 12 140 7 131 2.07e-19 90.5
MsG0080048174.01.T01 AT3G58210 30.811 185 122 2 330 508 1 185 4.80e-21 95.5
MsG0080048174.01.T01 AT3G58210 33.077 130 85 1 13 142 8 135 7.23e-18 85.9
MsG0080048174.01.T01 AT3G58340 33.577 137 90 1 330 466 1 136 7.97e-21 94.4
MsG0080048174.01.T01 AT3G58340 35.659 129 79 2 12 140 7 131 1.91e-19 90.1
MsG0080048174.01.T01 AT3G58410 34.848 132 82 2 330 461 1 128 6.04e-20 92.0
MsG0080048174.01.T01 AT3G58410 32.558 129 80 3 12 140 7 128 1.14e-15 79.0
MsG0080048174.01.T01 AT3G58360 31.757 148 100 1 330 477 1 147 9.45e-20 90.9
MsG0080048174.01.T01 AT3G58360 33.077 130 83 2 13 142 8 133 1.98e-15 78.2
MsG0080048174.01.T01 AT3G27040 31.429 140 96 0 336 475 8 147 1.73e-19 89.4
MsG0080048174.01.T01 AT3G27040 27.007 137 97 2 12 148 8 141 1.85e-11 65.9
MsG0080048174.01.T01 AT3G58260 34.043 141 90 2 330 467 1 141 3.92e-19 89.4
MsG0080048174.01.T01 AT3G58260 30.534 131 87 3 14 142 9 137 6.87e-13 70.9
MsG0080048174.01.T01 AT3G58350 30.882 136 92 1 330 463 1 136 4.73e-19 89.0
MsG0080048174.01.T01 AT3G58350 30.075 133 88 3 12 142 7 136 9.36e-13 70.1
MsG0080048174.01.T01 AT3G58350 30.882 136 92 1 330 463 1 136 4.73e-19 89.0
MsG0080048174.01.T01 AT3G58350 30.075 133 88 3 12 142 7 136 9.36e-13 70.1
MsG0080048174.01.T01 AT3G44800 32.168 143 97 0 335 477 3 145 6.54e-18 86.3
MsG0080048174.01.T01 AT3G44800 30.827 133 89 2 10 142 2 131 5.26e-13 71.2
MsG0080048174.01.T01 AT3G58200 33.058 121 81 0 330 450 1 121 1.34e-17 84.7
MsG0080048174.01.T01 AT3G58200 32.479 117 76 2 13 129 8 121 1.65e-12 69.7
MsG0080048174.01.T01 AT5G52330 33.333 135 86 2 323 457 6 136 1.67e-17 85.9
MsG0080048174.01.T01 AT5G52330 33.333 135 86 2 323 457 6 136 1.67e-17 85.9
MsG0080048174.01.T01 AT5G52330 33.333 135 86 2 323 457 6 136 1.67e-17 85.9
MsG0080048174.01.T01 AT2G05420 31.973 147 92 2 338 477 10 155 3.83e-17 83.2
MsG0080048174.01.T01 AT2G05420 32.836 134 79 4 16 141 12 142 9.91e-13 70.1
MsG0080048174.01.T01 AT5G43560 35.075 134 82 3 333 465 66 195 1.24e-16 84.7
MsG0080048174.01.T01 AT5G43560 31.507 146 88 6 9 151 66 202 6.89e-11 66.2
MsG0080048174.01.T01 AT5G43560 35.075 134 82 3 333 465 66 195 1.24e-16 84.7
MsG0080048174.01.T01 AT5G43560 31.507 146 88 6 9 151 66 202 6.89e-11 66.2
MsG0080048174.01.T01 AT2G05410 30.872 149 101 2 330 477 1 148 1.27e-16 81.6
MsG0080048174.01.T01 AT2G05410 33.913 115 73 2 16 130 11 122 1.39e-13 72.4
MsG0080048174.01.T01 AT5G26260 31.111 135 90 2 18 149 67 201 1.43e-16 82.4
MsG0080048174.01.T01 AT5G26260 31.507 146 94 4 328 467 53 198 5.28e-15 77.4
MsG0080048174.01.T01 AT1G31390 33.871 124 80 1 330 451 1 124 2.23e-16 80.1
MsG0080048174.01.T01 AT1G31390 30.833 120 80 2 12 130 7 124 2.87e-11 65.1
MsG0080048174.01.T01 AT2G25320 31.690 142 89 2 13 147 405 545 8.28e-16 82.4
MsG0080048174.01.T01 AT2G25320 31.788 151 92 3 337 477 405 554 9.42e-15 79.0
MsG0080048174.01.T01 AT2G25320 27.737 137 88 3 340 465 76 212 3.58e-12 70.5
MsG0080048174.01.T01 AT2G25320 31.690 142 89 2 13 147 404 544 8.42e-16 82.4
MsG0080048174.01.T01 AT2G25320 31.788 151 92 3 337 477 404 553 9.75e-15 79.0
MsG0080048174.01.T01 AT2G25320 27.737 137 88 3 340 465 75 211 3.61e-12 70.5
MsG0080048174.01.T01 AT2G25320 31.690 142 89 2 13 147 405 545 9.27e-16 82.0
MsG0080048174.01.T01 AT2G25320 31.788 151 92 3 337 477 405 554 1.10e-14 78.6
MsG0080048174.01.T01 AT2G25320 27.737 137 88 3 340 465 76 212 3.68e-12 70.5
MsG0080048174.01.T01 AT3G58220 26.286 175 121 4 338 508 13 183 1.13e-15 79.0
MsG0080048174.01.T01 AT3G58220 29.197 137 82 5 14 144 13 140 3.24e-11 65.5
MsG0080048174.01.T01 AT3G58410 32.237 152 79 3 316 461 2 135 1.20e-15 79.3
MsG0080048174.01.T01 AT3G58410 30.233 129 69 3 12 140 28 135 1.00e-11 67.4
MsG0080048174.01.T01 AT3G58290 30.657 137 85 3 12 140 10 144 1.27e-15 78.2
MsG0080048174.01.T01 AT3G58290 29.252 147 93 3 336 472 10 155 3.46e-14 73.9
MsG0080048174.01.T01 AT3G17380 32.061 131 83 3 341 465 25 155 1.31e-15 78.6
MsG0080048174.01.T01 AT3G17380 31.429 140 93 2 330 467 168 306 1.11e-14 75.9
MsG0080048174.01.T01 AT3G17380 29.104 134 92 2 14 144 22 155 4.05e-14 74.3
MsG0080048174.01.T01 AT3G17380 30.147 136 91 3 13 147 175 307 2.73e-12 68.9
MsG0080048174.01.T01 AT3G44790 34.848 132 82 1 335 466 3 130 1.72e-15 78.6
MsG0080048174.01.T01 AT3G44790 35.338 133 79 3 10 142 2 127 2.23e-14 75.1
MsG0080048174.01.T01 AT1G31400 28.947 152 103 2 330 479 1 149 1.73e-15 77.8
MsG0080048174.01.T01 AT1G04300 33.582 134 84 3 333 465 65 194 4.68e-15 79.7
MsG0080048174.01.T01 AT2G25330 33.099 142 88 1 13 147 359 500 6.68e-15 79.0
MsG0080048174.01.T01 AT2G25330 32.680 153 93 3 337 479 359 511 7.50e-13 72.4
MsG0080048174.01.T01 AT2G25330 26.562 128 90 3 340 463 50 177 2.79e-11 67.4
MsG0080048174.01.T01 AT4G09770 29.851 134 88 3 14 144 12 142 1.12e-14 75.1
MsG0080048174.01.T01 AT4G09770 29.851 134 88 3 14 144 12 142 1.65e-14 75.1
MsG0080048174.01.T01 AT4G09770 31.967 122 82 1 337 457 160 281 1.67e-11 66.2
MsG0080048174.01.T01 AT4G09770 29.851 134 88 3 14 144 12 142 1.65e-14 75.1
MsG0080048174.01.T01 AT4G09770 31.967 122 82 1 337 457 160 281 1.67e-11 66.2
MsG0080048174.01.T01 AT4G09770 29.851 134 88 3 14 144 38 168 1.73e-14 74.7
MsG0080048174.01.T01 AT4G09770 29.851 134 88 3 14 144 38 168 1.87e-14 75.5
MsG0080048174.01.T01 AT4G09770 31.967 122 82 1 337 457 186 307 2.61e-11 65.9
MsG0080048174.01.T01 AT5G26280 31.250 144 91 3 18 158 66 204 1.98e-14 75.9
MsG0080048174.01.T01 AT3G58220 29.323 133 86 4 338 466 13 141 2.16e-14 76.6
MsG0080048174.01.T01 AT3G58220 29.323 133 86 4 338 466 13 141 2.22e-14 75.5
MsG0080048174.01.T01 AT3G58220 29.630 135 80 5 14 142 13 138 9.16e-11 64.7
MsG0080048174.01.T01 AT5G26280 31.250 144 91 3 18 158 85 223 2.49e-14 75.5
MsG0080048174.01.T01 AT2G01790 29.496 139 96 1 340 476 11 149 2.58e-14 74.3
MsG0080048174.01.T01 AT2G32870 35.507 138 81 4 337 467 277 413 2.90e-14 75.9
MsG0080048174.01.T01 AT3G58220 29.323 133 86 4 338 466 13 141 3.88e-14 75.1
MsG0080048174.01.T01 AT3G58220 29.197 137 82 5 14 144 13 140 4.75e-11 65.5
MsG0080048174.01.T01 AT3G58220 29.323 133 86 4 338 466 13 141 3.94e-14 73.6
MsG0080048174.01.T01 AT3G58220 29.197 137 82 5 14 144 13 140 2.34e-11 65.1
MsG0080048174.01.T01 AT5G26320 29.231 130 87 2 18 142 66 195 2.21e-13 72.4
MsG0080048174.01.T01 AT5G26320 30.172 116 75 2 355 464 81 196 5.11e-12 68.6
MsG0080048174.01.T01 AT4G09780 32.117 137 84 2 337 464 214 350 2.59e-13 72.8
MsG0080048174.01.T01 AT4G09780 29.412 136 87 4 14 144 65 196 1.25e-11 67.8
MsG0080048174.01.T01 AT1G58270 32.919 161 94 7 328 486 247 395 3.74e-13 72.4
MsG0080048174.01.T01 AT3G58440 34.375 128 81 3 336 463 9 133 7.22e-13 72.4
MsG0080048174.01.T01 AT1G04300 31.690 142 84 4 333 465 65 202 7.88e-13 72.8
MsG0080048174.01.T01 AT3G58240 22.393 326 225 6 330 645 1 308 1.02e-12 70.1
MsG0080048174.01.T01 AT5G26300 28.986 138 94 3 15 149 63 199 1.13e-12 70.5
MsG0080048174.01.T01 AT5G26290 24.848 165 105 4 4 149 29 193 7.12e-12 67.8
MsG0080048174.01.T01 AT4G09780 31.757 148 81 4 337 464 214 361 7.43e-12 68.6
MsG0080048174.01.T01 AT4G09780 29.412 136 87 4 14 144 65 196 1.27e-11 67.8
MsG0080048174.01.T01 AT2G32880 33.803 142 79 5 337 467 178 315 1.55e-11 66.6
MsG0080048174.01.T01 AT2G42480 31.818 132 81 4 14 143 8 132 2.22e-11 66.6
MsG0080048174.01.T01 AT2G42460 29.078 141 97 2 330 470 2 139 5.65e-11 64.7
MsG0080048174.01.T01 AT2G04170 26.772 127 90 2 18 141 136 262 6.11e-11 64.7
MsG0080048174.01.T01 AT2G04170 26.923 130 92 2 15 141 11 140 6.60e-11 64.3
MsG0080048174.01.T01 AT2G04170 26.923 130 92 2 15 141 11 140 6.60e-11 64.3

Find 134 sgRNAs with CRISPR-Local

Find 456 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGAAATAGTTTCCATATT+TGG 0.110416 contig235end:+29545 MsG0080048174.01.T01:intergenic
GCAAACTGCCAATATGTTTA+AGG 0.125935 contig235end:-31725 MsG0080048174.01.T01:CDS
CAACAGTTTATCAATATATT+TGG 0.160836 contig235end:-31755 MsG0080048174.01.T01:CDS
GTAAGGATCTTCAAGCTTTA+TGG 0.167588 contig235end:-35006 MsG0080048174.01.T01:CDS
CAACCACTTATCTATTTATT+TGG 0.168309 contig235end:-36339 MsG0080048174.01.T01:CDS
TTCACAATAAATCCTCTTTC+AGG 0.171817 contig235end:+35250 MsG0080048174.01.T01:intergenic
ATAGATTTAAATTCTGAATT+AGG 0.189765 contig235end:-29041 MsG0080048174.01.T01:CDS
AATAAATTTAGATTCTAAAT+TGG 0.219168 contig235end:-34756 MsG0080048174.01.T01:CDS
CGGTACATATCTTGATCTTA+TGG 0.259772 contig235end:-32223 MsG0080048174.01.T01:intron
GTGAAATAGTTTCCATATTT+GGG 0.271306 contig235end:+29546 MsG0080048174.01.T01:intergenic
TAAGGATCTTCAAGCTTTAT+GGG 0.300720 contig235end:-35005 MsG0080048174.01.T01:CDS
GGAATTGGAAGTCCCAAATA+TGG 0.305242 contig235end:-29558 MsG0080048174.01.T01:CDS
TGAAAAGTTGAAGGAGTATA+TGG 0.322734 contig235end:-34882 MsG0080048174.01.T01:CDS
AATTTAAGAGCTTGATTTAG+TGG 0.324568 contig235end:+35172 MsG0080048174.01.T01:intergenic
CAGTAGTGTAGAACAATTAG+AGG 0.327754 contig235end:-29447 MsG0080048174.01.T01:CDS
TTGTTTACATCGTTCCCTTT+TGG 0.328528 contig235end:+31775 MsG0080048174.01.T01:intergenic
TGATGCTCCATTTCTACAAA+TGG 0.340050 contig235end:+32060 MsG0080048174.01.T01:intergenic
AGATTGTATCTCCTTGGCTT+TGG 0.352439 contig235end:+36784 MsG0080048174.01.T01:intergenic
TCAATGCAAGTCAGAAGAAC+TGG 0.356803 contig235end:-29760 MsG0080048174.01.T01:CDS
GAGCTAAACTCGTGAAAGTA+TGG 0.363455 contig235end:+29732 MsG0080048174.01.T01:intergenic
TCAAAATGTGCATATGGAAT+TGG 0.368049 contig235end:-29573 MsG0080048174.01.T01:CDS
GATTTGGCATTTGCTGCATT+AGG 0.377780 contig235end:-29368 MsG0080048174.01.T01:CDS
GTGAAGGATGTTTGTATTGT+TGG 0.378900 contig235end:-29680 MsG0080048174.01.T01:CDS
CATGAATGAACAAGCTTGTA+AGG 0.386530 contig235end:-35023 MsG0080048174.01.T01:CDS
GCTCCATCCCTTAAACATAT+TGG 0.387375 contig235end:+31717 MsG0080048174.01.T01:intergenic
TCTGAGCCTTTCGTTCTTTG+CGG 0.389418 contig235end:-36764 MsG0080048174.01.T01:CDS
ATTTGGCATTTGCTGCATTA+GGG 0.390923 contig235end:-29367 MsG0080048174.01.T01:CDS
AGCTGAGGTTTCAGTTTGTA+AGG 0.397187 contig235end:-29657 MsG0080048174.01.T01:CDS
CCTCATGTTCAATCTGCATT+AGG 0.400815 contig235end:-29224 MsG0080048174.01.T01:CDS
TATGAATGACCAAGCTTGTA+AGG 0.406254 contig235end:-29306 MsG0080048174.01.T01:CDS
CTTGGCTTTGGCTTGCAAGC+GGG 0.406992 contig235end:+36796 MsG0080048174.01.T01:intergenic
GTAATGACGCGACTCTTCTT+CGG 0.409853 contig235end:+29392 MsG0080048174.01.T01:intergenic
TTCACGATAAAACCGTTGTT+AGG 0.413903 contig235end:+29698 MsG0080048174.01.T01:intergenic
CTGAATTAGGATGTGGGAGT+TGG 0.415524 contig235end:-29028 MsG0080048174.01.T01:CDS
CAAACTGCCAATATGTTTAA+GGG 0.416894 contig235end:-31724 MsG0080048174.01.T01:CDS
GAGTCGCGTCATTACCGATT+TGG 0.417813 contig235end:-29384 MsG0080048174.01.T01:CDS
TCTGACTTGCATTGAGCTCA+TGG 0.419738 contig235end:+29768 MsG0080048174.01.T01:intergenic
TGAAAGTCAAAATGTGCATA+TGG 0.420616 contig235end:-29579 MsG0080048174.01.T01:CDS
GCTGATGCAGAGTTGGCATT+GGG 0.423501 contig235end:-35085 MsG0080048174.01.T01:CDS
TCAATGCAAATGAGGAGGCC+TGG 0.425040 contig235end:-35312 MsG0080048174.01.T01:CDS
CCACTTATCTATTTATTTGG+AGG 0.431059 contig235end:-36336 MsG0080048174.01.T01:CDS
CAATGCAAATGAGGAGGCCT+GGG 0.432100 contig235end:-35311 MsG0080048174.01.T01:CDS
AGGATTCTTATGTTTCCAAA+AGG 0.435968 contig235end:-31790 MsG0080048174.01.T01:CDS
TTAATAAATTTGATGCGGCT+TGG 0.437706 contig235end:-34967 MsG0080048174.01.T01:CDS
AGACACTTGTTGAAAGCAAA+AGG 0.441122 contig235end:-29074 MsG0080048174.01.T01:CDS
CTTGAAGATCCTTACAAGCT+TGG 0.447089 contig235end:+29297 MsG0080048174.01.T01:intergenic
TTTGGAGGTTGAAAAGTTGA+AGG 0.458143 contig235end:-29177 MsG0080048174.01.T01:CDS
GTGCAAACTAGTGTAGAAAC+TGG 0.459502 contig235end:+29524 MsG0080048174.01.T01:intergenic
CTCAGATAATGCTATGATAG+AGG 0.465299 contig235end:+35282 MsG0080048174.01.T01:intergenic
TTAAATTCTGAATTAGGATG+TGG 0.474050 contig235end:-29035 MsG0080048174.01.T01:CDS
TCGTTCTTTGCGGCTATCCA+TGG 0.477888 contig235end:-36754 MsG0080048174.01.T01:intron
TAATGCAGCAAATGCCAAAT+CGG 0.482815 contig235end:+29370 MsG0080048174.01.T01:intergenic
AGGGTTGTTCTCACCCTCAA+TGG 0.484578 contig235end:-29486 MsG0080048174.01.T01:CDS
AGCTGATGCAGAGTTGGCAT+TGG 0.490268 contig235end:-35086 MsG0080048174.01.T01:CDS
TGCAAACCGCTAACATGTCT+AGG 0.492551 contig235end:-36310 MsG0080048174.01.T01:CDS
TTATGTGGAGAAAGCTTTGG+AGG 0.493062 contig235end:-29192 MsG0080048174.01.T01:CDS
GATGCTCCATTTCTACAAAT+GGG 0.493972 contig235end:+32061 MsG0080048174.01.T01:intergenic
GTGGAAAGAGACATATTGAA+AGG 0.499242 contig235end:-34794 MsG0080048174.01.T01:CDS
AATTAGGATGTGGGAGTTGG+AGG 0.499887 contig235end:-29025 MsG0080048174.01.T01:CDS
GGTAGCTCTAGAGCTTGAAA+TGG 0.499935 contig235end:-34861 MsG0080048174.01.T01:CDS
AAGTTATGTGGAGAAAGCTT+TGG 0.500157 contig235end:-29195 MsG0080048174.01.T01:CDS
GGCATTTGCTGCATTAGGGA+GGG 0.501307 contig235end:-29363 MsG0080048174.01.T01:CDS
AAGCTATGTGGAGAAGGCTC+TGG 0.504857 contig235end:-34909 MsG0080048174.01.T01:CDS
GCAAACCGCTAACATGTCTA+GGG 0.506475 contig235end:-36309 MsG0080048174.01.T01:CDS
CCTCCAAATAAATAGATAAG+TGG 0.506980 contig235end:+36336 MsG0080048174.01.T01:intergenic
GGAGAGGGTAAAGACAAAGT+TGG 0.508063 contig235end:-34840 MsG0080048174.01.T01:CDS
TCTGGAGGCTGAAAAGTTGA+AGG 0.511177 contig235end:-34891 MsG0080048174.01.T01:CDS
AGGCTCAGATTGTATCTCCT+TGG 0.512550 contig235end:+36778 MsG0080048174.01.T01:intergenic
CCTTGGCTTTGGCTTGCAAG+CGG 0.513226 contig235end:+36795 MsG0080048174.01.T01:intergenic
GGATTCTTATGTTTCCAAAA+GGG 0.519973 contig235end:-31789 MsG0080048174.01.T01:CDS
TAAATTCTGAATTAGGATGT+GGG 0.522500 contig235end:-29034 MsG0080048174.01.T01:CDS
AAGTAGTTGTGCAGCACTGC+CGG 0.522710 contig235end:-32243 MsG0080048174.01.T01:intron
TTGTCCTCGGCGGATATCCA+TGG 0.523925 contig235end:-31948 MsG0080048174.01.T01:intron
AATTTAGATTTGATGTCACT+TGG 0.525067 contig235end:-29253 MsG0080048174.01.T01:CDS
TGAACAAGCTGATGCAGAGT+TGG 0.525468 contig235end:-35092 MsG0080048174.01.T01:CDS
TCTTGAAACGGAGAGGCTAA+AGG 0.526186 contig235end:-29135 MsG0080048174.01.T01:CDS
AATGGAGCATCAAGAAATGA+AGG 0.527699 contig235end:-32049 MsG0080048174.01.T01:CDS
GTGAAGGATGCTTGTATCGT+TGG 0.528067 contig235end:-35232 MsG0080048174.01.T01:CDS
TGCACTAAACCTACTGACAC+AGG 0.533031 contig235end:-29506 MsG0080048174.01.T01:CDS
TGAAACAAGCAACATGGAAG+TGG 0.534079 contig235end:-35125 MsG0080048174.01.T01:CDS
TGGAAAGAGACATATTGAAA+GGG 0.534565 contig235end:-34793 MsG0080048174.01.T01:CDS
ATAGACAGAACAGTCACAAA+AGG 0.536067 contig235end:-36236 MsG0080048174.01.T01:intron
ACCTCGTGTGATTGTCATGT+TGG 0.536099 contig235end:+31651 MsG0080048174.01.T01:intergenic
GAGCTTAAGAATCCTGAAAG+AGG 0.536807 contig235end:-35262 MsG0080048174.01.T01:CDS
TGGCATTTGCTGCATTAGGG+AGG 0.539387 contig235end:-29364 MsG0080048174.01.T01:CDS
GACAAAGTTGGATGTTGTTG+AGG 0.542018 contig235end:-34828 MsG0080048174.01.T01:CDS
CCATCCCCTAGACATGTTAG+CGG 0.542567 contig235end:+36304 MsG0080048174.01.T01:intergenic
CAAATAAATAGATAAGTGGT+TGG 0.545683 contig235end:+36340 MsG0080048174.01.T01:intergenic
TGTTTGTATTGTTGGAGCTG+AGG 0.551124 contig235end:-29672 MsG0080048174.01.T01:CDS
CAATGCAAGTCAGAAGAACT+GGG 0.551796 contig235end:-29759 MsG0080048174.01.T01:CDS
CATAAGATCAAGATATGTAC+CGG 0.554730 contig235end:+32224 MsG0080048174.01.T01:intergenic
GAGGGTGTGTCTGTTTCCAA+AGG 0.558857 contig235end:-36378 MsG0080048174.01.T01:CDS
AGGGTGTGTCTGTTTCCAAA+GGG 0.559008 contig235end:-36377 MsG0080048174.01.T01:CDS
TCCGCCGAGGACAAAAGAAT+CGG 0.559266 contig235end:+31957 MsG0080048174.01.T01:intergenic
AGATATTTGAGAAATTTACA+TGG 0.560145 contig235end:-32023 MsG0080048174.01.T01:CDS
GAAATTTAATAAATTTGATG+CGG 0.565106 contig235end:-34972 MsG0080048174.01.T01:CDS
AGAGACATATTGAAAGGGAA+AGG 0.566878 contig235end:-34788 MsG0080048174.01.T01:CDS
CTCTAGAGCTTGAAATGGAG+AGG 0.570262 contig235end:-34856 MsG0080048174.01.T01:CDS
CCGCTAACATGTCTAGGGGA+TGG 0.572316 contig235end:-36304 MsG0080048174.01.T01:CDS
TTTAGCAACGAGAAGCTATG+TGG 0.573979 contig235end:-34921 MsG0080048174.01.T01:CDS
AACGAGAAGCTATGTGGAGA+AGG 0.578646 contig235end:-34915 MsG0080048174.01.T01:CDS
CTATGTGGAGAAGGCTCTGG+AGG 0.578776 contig235end:-34906 MsG0080048174.01.T01:CDS
GCTAAAGAAGATTGAACAGT+GGG 0.580572 contig235end:+34938 MsG0080048174.01.T01:intergenic
CCTAATGCAGATTGAACATG+AGG 0.581300 contig235end:+29224 MsG0080048174.01.T01:intergenic
CTGCCAATATGTTTAAGGGA+TGG 0.581416 contig235end:-31720 MsG0080048174.01.T01:CDS
AAATTAACTACATCAGTGAC+AGG 0.584788 contig235end:-35154 MsG0080048174.01.T01:CDS
TGAAAAGTTGAAGGAGAATG+TGG 0.590764 contig235end:-29168 MsG0080048174.01.T01:CDS
TCTAGAGCTTGAAATGGAGA+GGG 0.594551 contig235end:-34855 MsG0080048174.01.T01:CDS
GGCTGAGACTCAATAAGTGA+AGG 0.596886 contig235end:+29413 MsG0080048174.01.T01:intergenic
ATTAGGAATGAAAAGTTATG+TGG 0.599520 contig235end:-29207 MsG0080048174.01.T01:CDS
GGATAGCCGCAAAGAACGAA+AGG 0.603426 contig235end:+36758 MsG0080048174.01.T01:intergenic
GGTAACGCTAGTTCTTGAAA+CGG 0.603557 contig235end:-29147 MsG0080048174.01.T01:CDS
CCGCTTGCAAGCCAAAGCCA+AGG 0.611814 contig235end:-36795 MsG0080048174.01.T01:CDS
TAGGGGATGGAGCAGAGATG+TGG 0.612256 contig235end:-36291 MsG0080048174.01.T01:CDS
TGAAAGAGGATTTATTGTGA+AGG 0.613594 contig235end:-35248 MsG0080048174.01.T01:CDS
TCACGAGTTCAATGCAAATG+AGG 0.616391 contig235end:-35320 MsG0080048174.01.T01:CDS
CGCTAGTTCTTGAAACGGAG+AGG 0.622684 contig235end:-29142 MsG0080048174.01.T01:CDS
TGGATGTGAAACAAGCAACA+TGG 0.627458 contig235end:-35131 MsG0080048174.01.T01:CDS
AACAAGCAACATGGAAGTGG+AGG 0.628644 contig235end:-35122 MsG0080048174.01.T01:CDS
GAGAACAACCCTGTGTCAGT+AGG 0.632827 contig235end:+29497 MsG0080048174.01.T01:intergenic
TGTTGAGGTTGATCGTGATG+TGG 0.635851 contig235end:-34813 MsG0080048174.01.T01:CDS
CGAGTTCAATGCAAATGAGG+AGG 0.644091 contig235end:-35317 MsG0080048174.01.T01:CDS
TATGATAGAGGAAAATCCCC+AGG 0.648596 contig235end:+35294 MsG0080048174.01.T01:intergenic
CTGATGCAGAGTTGGCATTG+GGG 0.654733 contig235end:-35084 MsG0080048174.01.T01:CDS
GCACTAAACCTACTGACACA+GGG 0.669892 contig235end:-29505 MsG0080048174.01.T01:CDS
CAGCTTCATGATCCTAACAA+CGG 0.670959 contig235end:-29710 MsG0080048174.01.T01:CDS
AATGCAAATGAGGAGGCCTG+GGG 0.676818 contig235end:-35310 MsG0080048174.01.T01:CDS
TTAACTACATCAGTGACAGG+TGG 0.678101 contig235end:-35151 MsG0080048174.01.T01:CDS
GGGTGTGTCTGTTTCCAAAG+GGG 0.687196 contig235end:-36376 MsG0080048174.01.T01:CDS
CAAACCGCTAACATGTCTAG+GGG 0.704232 contig235end:-36308 MsG0080048174.01.T01:CDS
TGCTAAAGAAGATTGAACAG+TGG 0.711246 contig235end:+34937 MsG0080048174.01.T01:intergenic
AATGCAAGTCAGAAGAACTG+GGG 0.737691 contig235end:-29758 MsG0080048174.01.T01:CDS
CATACCATGGATATCCGCCG+AGG 0.754008 contig235end:+31944 MsG0080048174.01.T01:intergenic
GCCAACATGACAATCACACG+AGG 0.760979 contig235end:-31652 MsG0080048174.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATACAAAAATGTAATAAA+TGG + contig235end:34038-34057 MsG0080048174.01.T01:intergenic 10.0%
!! AATAAATTTAGATTCTAAAT+TGG - contig235end:31123-31142 MsG0080048174.01.T01:intron 10.0%
!! TTAAAATGAAAAAAAGATAA+AGG - contig235end:35098-35117 MsG0080048174.01.T01:CDS 10.0%
!! TTTGAATGTAAATATTATAA+TGG + contig235end:32595-32614 MsG0080048174.01.T01:intergenic 10.0%
!!! AATTTTTAATAAGGTTAATT+TGG + contig235end:31824-31843 MsG0080048174.01.T01:intergenic 10.0%
!!! ATAGTTAGATAAATTTTATT+AGG + contig235end:35173-35192 MsG0080048174.01.T01:intergenic 10.0%
!!! ATCTTTTTTTCATTTTAATT+TGG + contig235end:35096-35115 MsG0080048174.01.T01:intergenic 10.0%
!!! ATGTTGAATAATTTTTAATA+AGG + contig235end:31833-31852 MsG0080048174.01.T01:intergenic 10.0%
!!! ATTAATACAATTTTAAAAGT+GGG + contig235end:31870-31889 MsG0080048174.01.T01:intergenic 10.0%
!!! CATATATTTTTTTATTTAAG+TGG - contig235end:33250-33269 MsG0080048174.01.T01:intron 10.0%
!!! CTTTTTTATGAAAAATTTAT+AGG - contig235end:33994-34013 MsG0080048174.01.T01:intron 10.0%
!!! TATATTTTTTTATTTAAGTG+GGG - contig235end:33252-33271 MsG0080048174.01.T01:intron 10.0%
!!! TTTATATATTTTACGATTTT+AGG + contig235end:35496-35515 MsG0080048174.01.T01:intergenic 10.0%
!!! TTTTTCAAAATCAATTTTAA+TGG + contig235end:31741-31760 MsG0080048174.01.T01:intergenic 10.0%
!! ACCAAAAATAATAAAAACAA+AGG + contig235end:31557-31576 MsG0080048174.01.T01:intergenic 15.0%
!! ATAGATTTAAATTCTGAATT+AGG - contig235end:36838-36857 MsG0080048174.01.T01:CDS 15.0%
!! CTTAAAAATTCATATGAAAA+TGG + contig235end:34949-34968 MsG0080048174.01.T01:intergenic 15.0%
!! GAAATTTAATAAATTTGATG+CGG - contig235end:30907-30926 MsG0080048174.01.T01:intron 15.0%
!! GCATTAATTAAATTAAAACA+GGG - contig235end:32823-32842 MsG0080048174.01.T01:intron 15.0%
!! GTATATAAAAATTGACAAAA+AGG - contig235end:35069-35088 MsG0080048174.01.T01:CDS 15.0%
!! TAAAAAAAATTAAGTGAAAG+AGG - contig235end:32980-32999 MsG0080048174.01.T01:intron 15.0%
!! TAAGTGATTATACAAATTAT+GGG - contig235end:33136-33155 MsG0080048174.01.T01:intron 15.0%
!! TATACATTAGTTAAAAAGTA+TGG + contig235end:29856-29875 MsG0080048174.01.T01:intergenic 15.0%
!! TGCATTAATTAAATTAAAAC+AGG - contig235end:32822-32841 MsG0080048174.01.T01:intron 15.0%
!! TTAAGTGATTATACAAATTA+TGG - contig235end:33135-33154 MsG0080048174.01.T01:intron 15.0%
!! TTGAAATGAAAAAAAGATAA+AGG + contig235end:34911-34930 MsG0080048174.01.T01:intergenic 15.0%
!!! AAAATTTTGAGAAATTTATC+TGG - contig235end:29044-29063 MsG0080048174.01.T01:CDS 15.0%
!!! AAATTACGTTTTATTTTACT+AGG + contig235end:32895-32914 MsG0080048174.01.T01:intergenic 15.0%
!!! AATAAATAAGGGTATAATAA+TGG + contig235end:30165-30184 MsG0080048174.01.T01:intergenic 15.0%
!!! AATTACGTTTTATTTTACTA+GGG + contig235end:32894-32913 MsG0080048174.01.T01:intergenic 15.0%
!!! ATATTTTTTTATTTAAGTGG+GGG - contig235end:33253-33272 MsG0080048174.01.T01:intron 15.0%
!!! ATTTTGAGAAAAAGAAAAAA+TGG + contig235end:30099-30118 MsG0080048174.01.T01:intergenic 15.0%
!!! CACTTTTAAAATTGTATTAA+TGG - contig235end:31869-31888 MsG0080048174.01.T01:intron 15.0%
!!! CATTAATACAATTTTAAAAG+TGG + contig235end:31871-31890 MsG0080048174.01.T01:intergenic 15.0%
!!! GTTTGAAATTCAATAAATAA+GGG + contig235end:30176-30195 MsG0080048174.01.T01:intergenic 15.0%
!!! TATTTTTCTAAACGATAAAA+TGG + contig235end:35833-35852 MsG0080048174.01.T01:intergenic 15.0%
!!! TGTTTGAAATTCAATAAATA+AGG + contig235end:30177-30196 MsG0080048174.01.T01:intergenic 15.0%
!!! TTAAAATTGTATTAATGGAT+CGG - contig235end:31874-31893 MsG0080048174.01.T01:intron 15.0%
!!! TTACTCTATAATTTAGAATT+TGG - contig235end:35646-35665 MsG0080048174.01.T01:intron 15.0%
!!! TTCATGATTTTATTTTCTTA+TGG - contig235end:34976-34995 MsG0080048174.01.T01:CDS 15.0%
!! AAAATTTAGCTATAGATCTA+TGG + contig235end:31164-31183 MsG0080048174.01.T01:intergenic 20.0%
!! AAATTAAAGGACTATGATTA+AGG - contig235end:35907-35926 MsG0080048174.01.T01:intron 20.0%
!! AACAATCATTTGCAAATAAA+AGG - contig235end:32201-32220 MsG0080048174.01.T01:intron 20.0%
!! ACAAAATACATTTCAAAAGA+AGG + contig235end:35528-35547 MsG0080048174.01.T01:intergenic 20.0%
!! AGATATTTGAGAAATTTACA+TGG - contig235end:33856-33875 MsG0080048174.01.T01:intron 20.0%
!! AGTAACAAAACTAAATGAAA+TGG + contig235end:32465-32484 MsG0080048174.01.T01:intergenic 20.0%
!! CAACAGTTTATCAATATATT+TGG - contig235end:34124-34143 MsG0080048174.01.T01:intron 20.0%
!! CATTGCAAAAACATAAAATA+AGG + contig235end:31321-31340 MsG0080048174.01.T01:intergenic 20.0%
!! GCAACAAGATATTAATAAAA+TGG - contig235end:34836-34855 MsG0080048174.01.T01:CDS 20.0%
!! GTTACCTAAAATAAAGTTAA+GGG + contig235end:34880-34899 MsG0080048174.01.T01:intergenic 20.0%
!! GTTCGATAAATTATTAGTAT+CGG - contig235end:33377-33396 MsG0080048174.01.T01:intron 20.0%
!! TAAATAAATGACAACACAAA+AGG - contig235end:31379-31398 MsG0080048174.01.T01:intron 20.0%
!! TAATATCTTGTTGCATAATT+GGG + contig235end:34830-34849 MsG0080048174.01.T01:intergenic 20.0%
!! TGTTACCTAAAATAAAGTTA+AGG + contig235end:34881-34900 MsG0080048174.01.T01:intergenic 20.0%
!! TTAATATCTTGTTGCATAAT+TGG + contig235end:34831-34850 MsG0080048174.01.T01:intergenic 20.0%
!! TTACATGAATTTCATCTAAT+AGG + contig235end:32550-32569 MsG0080048174.01.T01:intergenic 20.0%
!! TTTAGATGAAAAATCACTAA+TGG - contig235end:35796-35815 MsG0080048174.01.T01:intron 20.0%
!! TTTAGGAGGAAAAATAATAA+AGG + contig235end:35479-35498 MsG0080048174.01.T01:intergenic 20.0%
!! TTTGAGCAAATATATTGTTA+TGG + contig235end:31687-31706 MsG0080048174.01.T01:intergenic 20.0%
!!! AAAAAAAGAGTATACATGAT+TGG + contig235end:33406-33425 MsG0080048174.01.T01:intergenic 20.0%
!!! AATATATATAAGTATTGGCT+TGG + contig235end:33599-33618 MsG0080048174.01.T01:intergenic 20.0%
!!! AATGATTGTTTTCTCTTTTA+TGG + contig235end:32191-32210 MsG0080048174.01.T01:intergenic 20.0%
!!! ACAATTAACTTGTTTAATAC+AGG + contig235end:32021-32040 MsG0080048174.01.T01:intergenic 20.0%
!!! AGTATATATTTTCTTTTGAG+AGG - contig235end:34657-34676 MsG0080048174.01.T01:intron 20.0%
!!! ATACTTTATCTTTTTAACGA+CGG - contig235end:35443-35462 MsG0080048174.01.T01:intron 20.0%
!!! ATATATATAAGTATTGGCTT+GGG + contig235end:33598-33617 MsG0080048174.01.T01:intergenic 20.0%
!!! ATATATTTTACGATTTTAGG+AGG + contig235end:35493-35512 MsG0080048174.01.T01:intergenic 20.0%
!!! ATTAATTGTGTTGATTTCAA+TGG + contig235end:30260-30279 MsG0080048174.01.T01:intergenic 20.0%
!!! ATTACGTTTTATTTTACTAG+GGG + contig235end:32893-32912 MsG0080048174.01.T01:intergenic 20.0%
!!! ATTTGTGTTTTAATCTGATT+TGG - contig235end:29467-29486 MsG0080048174.01.T01:CDS 20.0%
!!! ATTTTATGTTTTTGCAATGA+TGG - contig235end:31322-31341 MsG0080048174.01.T01:intron 20.0%
!!! GAAGCTTTAGATTAAATTAA+AGG - contig235end:35894-35913 MsG0080048174.01.T01:intron 20.0%
!!! GCCTTTGTTTTTATTATTTT+TGG - contig235end:31553-31572 MsG0080048174.01.T01:intron 20.0%
!!! GTTATCTGAAATTAAGTTAA+GGG - contig235end:35129-35148 MsG0080048174.01.T01:CDS 20.0%
!!! TATTTTTTTATTTAAGTGGG+GGG - contig235end:33254-33273 MsG0080048174.01.T01:intron 20.0%
!!! TGTTATCTGAAATTAAGTTA+AGG - contig235end:35128-35147 MsG0080048174.01.T01:CDS 20.0%
!!! TTAATTCTTTTTATGTGTGA+CGG - contig235end:33679-33698 MsG0080048174.01.T01:intron 20.0%
!!! TTCTTTTTTAAGTAGTTTAG+TGG + contig235end:34606-34625 MsG0080048174.01.T01:intergenic 20.0%
!!! TTTTAATAAGGTTAATTTGG+AGG + contig235end:31821-31840 MsG0080048174.01.T01:intergenic 20.0%
!!! TTTTGTATTTTGATCTGATT+TGG - contig235end:34048-34067 MsG0080048174.01.T01:intron 20.0%
! AAAAAAAAAACAGCGAACTT+TGG + contig235end:30416-30435 MsG0080048174.01.T01:intergenic 25.0%
! AAAAGACAATTATTGTGAGA+CGG + contig235end:30074-30093 MsG0080048174.01.T01:intergenic 25.0%
! AAACGACTATAATTTAGAGA+CGG - contig235end:30309-30328 MsG0080048174.01.T01:intron 25.0%
! AAATATATTGTTATGGTGAG+TGG + contig235end:31680-31699 MsG0080048174.01.T01:intergenic 25.0%
! AAATTGACATTCGTTTAAGA+TGG + contig235end:35769-35788 MsG0080048174.01.T01:intergenic 25.0%
! AATAAAAACAAAGGCTATGT+TGG + contig235end:31548-31567 MsG0080048174.01.T01:intergenic 25.0%
! AATCACTTAATCAGTCAATT+TGG + contig235end:33125-33144 MsG0080048174.01.T01:intergenic 25.0%
! AATTATAGTTGATCAAGTGT+TGG - contig235end:31905-31924 MsG0080048174.01.T01:intron 25.0%
! AATTTAAGAGCTTGATTTAG+TGG + contig235end:30710-30729 MsG0080048174.01.T01:intergenic 25.0%
! AATTTAGATTTGATGTCACT+TGG - contig235end:36626-36645 MsG0080048174.01.T01:intron 25.0%
! ACTAAAGTGAATTACATTGT+TGG - contig235end:35242-35261 MsG0080048174.01.T01:CDS 25.0%
! AGATATCTTAAAACGAGATA+TGG + contig235end:35973-35992 MsG0080048174.01.T01:intergenic 25.0%
! ATTAGGAATGAAAAGTTATG+TGG - contig235end:36672-36691 MsG0080048174.01.T01:intron 25.0%
! CAAATAAATAGATAAGTGGT+TGG + contig235end:29542-29561 MsG0080048174.01.T01:intergenic 25.0%
! CAACCACTTATCTATTTATT+TGG - contig235end:29540-29559 MsG0080048174.01.T01:CDS 25.0%
! CATGTGTATTTATTATTCAG+TGG + contig235end:29753-29772 MsG0080048174.01.T01:intergenic 25.0%
! CTCTAAATTATAGTCGTTTA+AGG + contig235end:30308-30327 MsG0080048174.01.T01:intergenic 25.0%
! CTCTTATTAATTGTAGTTAG+TGG + contig235end:30211-30230 MsG0080048174.01.T01:intergenic 25.0%
! CTTAATTTCAGATAACAGTT+TGG + contig235end:35125-35144 MsG0080048174.01.T01:intergenic 25.0%
! CTTGAAATTTGTGTATTTCA+GGG + contig235end:31613-31632 MsG0080048174.01.T01:intergenic 25.0%
! GAAGAACTTCTAAATATGAA+AGG - contig235end:32954-32973 MsG0080048174.01.T01:intron 25.0%
! GATCAGATTTATGTACAAAA+AGG - contig235end:33170-33189 MsG0080048174.01.T01:intron 25.0%
! GATTTCATATACATCACATA+AGG - contig235end:32618-32637 MsG0080048174.01.T01:intron 25.0%
! GTATAGTTGTTATCTAGAAA+AGG + contig235end:35427-35446 MsG0080048174.01.T01:intergenic 25.0%
! GTATTTATTATTCAGTGGTT+AGG + contig235end:29748-29767 MsG0080048174.01.T01:intergenic 25.0%
! GTGAAAATTGTCTTAAATAG+TGG - contig235end:31789-31808 MsG0080048174.01.T01:CDS 25.0%
! GTGAAATAGTTTCCATATTT+GGG + contig235end:36336-36355 MsG0080048174.01.T01:intergenic 25.0%
! TAAATTCTGAATTAGGATGT+GGG - contig235end:36845-36864 MsG0080048174.01.T01:CDS 25.0%
! TAACGATCAAAATTGTACAT+TGG - contig235end:29978-29997 MsG0080048174.01.T01:intron 25.0%
! TAATTGTATTATGCATTGTC+TGG - contig235end:32034-32053 MsG0080048174.01.T01:CDS 25.0%
! TATACATCACATAAGGTAAA+AGG - contig235end:32625-32644 MsG0080048174.01.T01:intron 25.0%
! TCATATGAAAATGGATCAAA+AGG + contig235end:34940-34959 MsG0080048174.01.T01:intergenic 25.0%
! TCTTGAAATTTGTGTATTTC+AGG + contig235end:31614-31633 MsG0080048174.01.T01:intergenic 25.0%
! TGAAAAATCACTAATGGTTA+TGG - contig235end:35802-35821 MsG0080048174.01.T01:intron 25.0%
! TGCAATAAATTTCAGATTTC+TGG - contig235end:32091-32110 MsG0080048174.01.T01:CDS 25.0%
! TTAAATTCTGAATTAGGATG+TGG - contig235end:36844-36863 MsG0080048174.01.T01:CDS 25.0%
! TTGAAATTTGTGTATTTCAG+GGG + contig235end:31612-31631 MsG0080048174.01.T01:intergenic 25.0%
! TTTCTAAACGATAAAATGGT+GGG + contig235end:35829-35848 MsG0080048174.01.T01:intergenic 25.0%
!! AATTTTGAACACTTGATTCT+TGG + contig235end:29030-29049 MsG0080048174.01.T01:intergenic 25.0%
!! ATTTTTCCCATTTGTAGAAA+TGG - contig235end:33812-33831 MsG0080048174.01.T01:intron 25.0%
!! GAAATCTGAAATTTATTGCA+CGG + contig235end:32091-32110 MsG0080048174.01.T01:intergenic 25.0%
!! TAATTCTTTTTATGTGTGAC+GGG - contig235end:33680-33699 MsG0080048174.01.T01:intron 25.0%
!! TTAAAATTTTGAACACGCAT+AGG + contig235end:32132-32151 MsG0080048174.01.T01:intergenic 25.0%
!! TTCGAATCACTTAGAAATTT+TGG - contig235end:33960-33979 MsG0080048174.01.T01:intron 25.0%
!! TTTTCCTTTTCTTTCTAAAC+TGG - contig235end:31211-31230 MsG0080048174.01.T01:intron 25.0%
!! TTTTCTAAACGATAAAATGG+TGG + contig235end:35830-35849 MsG0080048174.01.T01:intergenic 25.0%
!!! ATCCATAATTTTTTCCATTG+AGG + contig235end:36410-36429 MsG0080048174.01.T01:intergenic 25.0%
!!! ATGATGTATTTTGAAACGAA+GGG - contig235end:29418-29437 MsG0080048174.01.T01:CDS 25.0%
!!! ATTGGACATGTATTTTGAAA+CGG + contig235end:29797-29816 MsG0080048174.01.T01:intergenic 25.0%
!!! ATTTTGATCTGATTTGGTTT+TGG - contig235end:34054-34073 MsG0080048174.01.T01:intron 25.0%
!!! CATTTTAATGAGATGTGAAT+TGG - contig235end:35713-35732 MsG0080048174.01.T01:intron 25.0%
!!! GTTGATTTGATTACAGTATT+AGG - contig235end:36028-36047 MsG0080048174.01.T01:intron 25.0%
!!! TAAGGATCTTCAAGTTTTAT+GGG - contig235end:36591-36610 MsG0080048174.01.T01:intron 25.0%
!!! TAATGATTTTGATCTTTGAC+TGG - contig235end:30347-30366 MsG0080048174.01.T01:intron 25.0%
!!! TAGTCCCTTAACTTTATTTT+AGG - contig235end:34873-34892 MsG0080048174.01.T01:CDS 25.0%
!!! TATATTTTCTTTTGAGAGGT+AGG - contig235end:34661-34680 MsG0080048174.01.T01:intron 25.0%
!!! TCCATAATTTTTTCCATTGA+GGG + contig235end:36409-36428 MsG0080048174.01.T01:intergenic 25.0%
!!! TTTATCGAACCTTTTAATTC+AGG + contig235end:33367-33386 MsG0080048174.01.T01:intergenic 25.0%
AAATTAACTACATCAGTGAC+AGG - contig235end:30725-30744 MsG0080048174.01.T01:intron 30.0%
AAGTGTATGATCGTCATAAT+TGG - contig235end:31759-31778 MsG0080048174.01.T01:CDS 30.0%
ACAAAATTTCTACCGTCAAA+AGG + contig235end:34265-34284 MsG0080048174.01.T01:intergenic 30.0%
ACCCTCAATGGAAAAAATTA+TGG - contig235end:36405-36424 MsG0080048174.01.T01:intron 30.0%
ACTAGTATTCTACGAATGAA+AGG - contig235end:35680-35699 MsG0080048174.01.T01:intron 30.0%
AGGATTCTTATGTTTCCAAA+AGG - contig235end:34089-34108 MsG0080048174.01.T01:intron 30.0%
AGGCATTCATACAAACAATT+TGG - contig235end:32237-32256 MsG0080048174.01.T01:intron 30.0%
ATAGTGCACATTGCAAAAAT+TGG + contig235end:29815-29834 MsG0080048174.01.T01:intergenic 30.0%
ATCGTAGATATAAGATGCAA+TGG + contig235end:31430-31449 MsG0080048174.01.T01:intergenic 30.0%
ATTGTATGACATGTCATGAT+TGG + contig235end:34322-34341 MsG0080048174.01.T01:intergenic 30.0%
CAAAATTTCTACCGTCAAAA+GGG + contig235end:34264-34283 MsG0080048174.01.T01:intergenic 30.0%
CAAACTGCCAATATGTTTAA+GGG - contig235end:34155-34174 MsG0080048174.01.T01:intron 30.0%
CAATCCAGTTTAGAAAGAAA+AGG + contig235end:31218-31237 MsG0080048174.01.T01:intergenic 30.0%
CATAAGATCAAGATATGTAC+CGG + contig235end:33658-33677 MsG0080048174.01.T01:intergenic 30.0%
CCACTTATCTATTTATTTGG+AGG - contig235end:29543-29562 MsG0080048174.01.T01:CDS 30.0%
CCTCCAAATAAATAGATAAG+TGG + contig235end:29546-29565 MsG0080048174.01.T01:intergenic 30.0%
GGAAAATGAGACATATTGAA+AGG + contig235end:30489-30508 MsG0080048174.01.T01:intergenic 30.0%
GGATTCTTATGTTTCCAAAA+GGG - contig235end:34090-34109 MsG0080048174.01.T01:intron 30.0%
GGTGAAATAGTTTCCATATT+TGG + contig235end:36337-36356 MsG0080048174.01.T01:intergenic 30.0%
GTAGATAAGTATGGTGATAA+TGG - contig235end:32314-32333 MsG0080048174.01.T01:intron 30.0%
GTATGTTATGTAAAAGAGCT+AGG + contig235end:31299-31318 MsG0080048174.01.T01:intergenic 30.0%
GTCCTTCAACTCTATTAAAA+AGG + contig235end:32280-32299 MsG0080048174.01.T01:intergenic 30.0%
GTGATTATACAAATTATGGG+TGG - contig235end:33139-33158 MsG0080048174.01.T01:intron 30.0%
TAAAACGAGATATGGAAACA+TGG + contig235end:35965-35984 MsG0080048174.01.T01:intergenic 30.0%
TAAAAGGTGAGAGATAATAG+AGG - contig235end:32217-32236 MsG0080048174.01.T01:intron 30.0%
TAGGAGAATAAATGTAAGAG+AGG + contig235end:32531-32550 MsG0080048174.01.T01:intergenic 30.0%
TCAAAATGTGCATATGGAAT+TGG - contig235end:36306-36325 MsG0080048174.01.T01:CDS 30.0%
TCATTGGCAAAAAGAAGATA+GGG + contig235end:31978-31997 MsG0080048174.01.T01:intergenic 30.0%
TGAAAGAGGATTTATTGTGA+AGG - contig235end:30631-30650 MsG0080048174.01.T01:intron 30.0%
TGAAAGTCAAAATGTGCATA+TGG - contig235end:36300-36319 MsG0080048174.01.T01:CDS 30.0%
TGGAAAGAGACATATTGAAA+GGG - contig235end:31086-31105 MsG0080048174.01.T01:intron 30.0%
TTAATAAATTTGATGCGGCT+TGG - contig235end:30912-30931 MsG0080048174.01.T01:intron 30.0%
TTATCTACCATCTGTGTTTA+AGG + contig235end:32302-32321 MsG0080048174.01.T01:intergenic 30.0%
TTCACAATAAATCCTCTTTC+AGG + contig235end:30632-30651 MsG0080048174.01.T01:intergenic 30.0%
TTCTAAACGATAAAATGGTG+GGG + contig235end:35828-35847 MsG0080048174.01.T01:intergenic 30.0%
TTCTTATGCAATCATAGACA+AGG + contig235end:35026-35045 MsG0080048174.01.T01:intergenic 30.0%
TTGTGTTTCAAATATGCATG+TGG - contig235end:34281-34300 MsG0080048174.01.T01:intron 30.0%
! ATGATCCAATTTTCCTTTCA+AGG - contig235end:34766-34785 MsG0080048174.01.T01:CDS 30.0%
! GATCGTCATAATTGGAATTT+TGG - contig235end:31767-31786 MsG0080048174.01.T01:CDS 30.0%
! TAAGGATCTTCAAGCTTTAT+GGG - contig235end:30874-30893 MsG0080048174.01.T01:intron 30.0%
! TCGTGCAAAAGGATTTTAAA+GGG - contig235end:29683-29702 MsG0080048174.01.T01:CDS 30.0%
! TCGTTTAAGATGGAATTTGT+TGG + contig235end:35759-35778 MsG0080048174.01.T01:intergenic 30.0%
! TGAAAAGTTGAAGGAGTATA+TGG - contig235end:30997-31016 MsG0080048174.01.T01:intron 30.0%
! TGCCTTTTTAATAGAGTTGA+AGG - contig235end:32275-32294 MsG0080048174.01.T01:intron 30.0%
! TTAAAATCCTTTTGCACGAA+GGG + contig235end:29682-29701 MsG0080048174.01.T01:intergenic 30.0%
! TTCGTGCAAAAGGATTTTAA+AGG - contig235end:29682-29701 MsG0080048174.01.T01:CDS 30.0%
! TTTGTCGTTTCATTCATTCA+TGG - contig235end:34711-34730 MsG0080048174.01.T01:intron 30.0%
! TTTTATGACTAGTGACTAGA+TGG + contig235end:32781-32800 MsG0080048174.01.T01:intergenic 30.0%
! TTTTTCCAAGGTGAATAAGT+GGG + contig235end:34572-34591 MsG0080048174.01.T01:intergenic 30.0%
!! AAAAGGATTTTAAAGGGGAA+TGG - contig235end:29689-29708 MsG0080048174.01.T01:CDS 30.0%
!! GTAAGGATCTTCAAGTTTTA+TGG - contig235end:36590-36609 MsG0080048174.01.T01:intron 30.0%
!! TACAATTTTAAAAGTGGGAG+AGG + contig235end:31865-31884 MsG0080048174.01.T01:intergenic 30.0%
!! TTGTTTTACACAAACGAACA+CGG - contig235end:34504-34523 MsG0080048174.01.T01:intron 30.0%
!! TTTAAAATCCTTTTGCACGA+AGG + contig235end:29683-29702 MsG0080048174.01.T01:intergenic 30.0%
!!! ATCTGATTTGGTTTTGCTTT+AGG - contig235end:29479-29498 MsG0080048174.01.T01:CDS 30.0%
!!! ATCTGATTTGGTTTTGGTTT+TGG - contig235end:34060-34079 MsG0080048174.01.T01:intron 30.0%
!!! CATGATGTATTTTGAAACGA+AGG - contig235end:29417-29436 MsG0080048174.01.T01:CDS 30.0%
!!! CATTTTGACTTTCAGATGTT+AGG + contig235end:36294-36313 MsG0080048174.01.T01:intergenic 30.0%
!!! CTCGACTCTCTTTTTAAAAT+AGG - contig235end:32867-32886 MsG0080048174.01.T01:intron 30.0%
!!! GACATGTATTTTGAAACAGA+GGG - contig235end:30023-30042 MsG0080048174.01.T01:intron 30.0%
!!! GATGGATACTTTATTTTGTG+TGG - contig235end:31340-31359 MsG0080048174.01.T01:intron 30.0%
!!! GTTAGAATTCGTTTTTTCCA+AGG + contig235end:34584-34603 MsG0080048174.01.T01:intergenic 30.0%
!!! TGATGTATTTTGAAACGAAG+GGG - contig235end:29419-29438 MsG0080048174.01.T01:CDS 30.0%
!!! TTTGGTTTTGGTTTTGGTTT+AGG - contig235end:34066-34085 MsG0080048174.01.T01:intron 30.0%
!!! TTTTTTCCAAGGTGAATAAG+TGG + contig235end:34573-34592 MsG0080048174.01.T01:intergenic 30.0%
AAGTTATGTGGAGAAAGCTT+TGG - contig235end:36684-36703 MsG0080048174.01.T01:intron 35.0%
ACACAGATGGTAGATAAGTA+TGG - contig235end:32305-32324 MsG0080048174.01.T01:intron 35.0%
ACGGTACATGATTATATGCA+GGG - contig235end:34523-34542 MsG0080048174.01.T01:intron 35.0%
AGACCTCTTTGTCGTATAAT+CGG - contig235end:32349-32368 MsG0080048174.01.T01:intron 35.0%
AGAGACATATTGAAAGGGAA+AGG - contig235end:31091-31110 MsG0080048174.01.T01:intron 35.0%
AGAGGTAAGATTACGTTACA+AGG + contig235end:33438-33457 MsG0080048174.01.T01:intergenic 35.0%
AGTGATTCGAATTCATACCA+TGG + contig235end:33951-33970 MsG0080048174.01.T01:intergenic 35.0%
ATAGACAGAACAGTCACAAA+AGG - contig235end:29643-29662 MsG0080048174.01.T01:CDS 35.0%
ATCATTCAAATGCCTTACCA+TGG + contig235end:29145-29164 MsG0080048174.01.T01:intergenic 35.0%
CAAATTATGGGTGGTTTGAT+AGG - contig235end:33148-33167 MsG0080048174.01.T01:intron 35.0%
CAACTCTATTAAAAAGGCAG+AGG + contig235end:32274-32293 MsG0080048174.01.T01:intergenic 35.0%
CAGTAGTGTAGAACAATTAG+AGG - contig235end:36432-36451 MsG0080048174.01.T01:intron 35.0%
CATGAATGAACAAGCTTGTA+AGG - contig235end:30856-30875 MsG0080048174.01.T01:intron 35.0%
CCAATCCTTGAAAGGAAAAT+TGG + contig235end:34774-34793 MsG0080048174.01.T01:intergenic 35.0%
CGGTACATATCTTGATCTTA+TGG - contig235end:33656-33675 MsG0080048174.01.T01:intron 35.0%
CTAGACTACTTGACAAAAAG+TGG - contig235end:35331-35350 MsG0080048174.01.T01:intron 35.0%
CTCAGATAATGCTATGATAG+AGG + contig235end:30600-30619 MsG0080048174.01.T01:intergenic 35.0%
CTTTATCAACCAATCATGAC+AGG - contig235end:34446-34465 MsG0080048174.01.T01:intron 35.0%
GAATGAGTACATCATGACAT+AGG - contig235end:32433-32452 MsG0080048174.01.T01:intron 35.0%
GACATGTCATACAATGTTAG+TGG - contig235end:34327-34346 MsG0080048174.01.T01:intron 35.0%
GATGCTCCATTTCTACAAAT+GGG + contig235end:33821-33840 MsG0080048174.01.T01:intergenic 35.0%
GCAAACTGCCAATATGTTTA+AGG - contig235end:34154-34173 MsG0080048174.01.T01:intron 35.0%
GCTAAAGAAGATTGAACAGT+GGG + contig235end:30944-30963 MsG0080048174.01.T01:intergenic 35.0%
GTAAGGATCTTCAAGCTTTA+TGG - contig235end:30873-30892 MsG0080048174.01.T01:intron 35.0%
GTACATTGGTATATGTGAAG+TGG - contig235end:29992-30011 MsG0080048174.01.T01:intron 35.0%
GTCATTGGCAAAAAGAAGAT+AGG + contig235end:31979-31998 MsG0080048174.01.T01:intergenic 35.0%
GTGAAGGATGTTTGTATTGT+TGG - contig235end:36199-36218 MsG0080048174.01.T01:intron 35.0%
GTGGAAAGAGACATATTGAA+AGG - contig235end:31085-31104 MsG0080048174.01.T01:intron 35.0%
TAAAAAAGAAGCAGCAGAAG+AGG + contig235end:33456-33475 MsG0080048174.01.T01:intergenic 35.0%
TAATGCAGCAAATGCCAAAT+CGG + contig235end:36512-36531 MsG0080048174.01.T01:intergenic 35.0%
TATATGTGAAGTGGTTGACT+TGG - contig235end:30001-30020 MsG0080048174.01.T01:intron 35.0%
TATGAATGACCAAGCTTGTA+AGG - contig235end:36573-36592 MsG0080048174.01.T01:intron 35.0%
TATTGGAAACCCATGCAAAT+AGG - contig235end:31933-31952 MsG0080048174.01.T01:intron 35.0%
TCCAAACAAAAGAAGGTCAT+TGG + contig235end:31994-32013 MsG0080048174.01.T01:intergenic 35.0%
TGAAAAGTTGAAGGAGAATG+TGG - contig235end:36711-36730 MsG0080048174.01.T01:intron 35.0%
TGATGCTCCATTTCTACAAA+TGG + contig235end:33822-33841 MsG0080048174.01.T01:intergenic 35.0%
TGCTAAAGAAGATTGAACAG+TGG + contig235end:30945-30964 MsG0080048174.01.T01:intergenic 35.0%
TTCACGATAAAACCGTTGTT+AGG + contig235end:36184-36203 MsG0080048174.01.T01:intergenic 35.0%
TTCTAAATTGGAGTGAGACT+TGG - contig235end:31135-31154 MsG0080048174.01.T01:intron 35.0%
TTCTAATGACCTGTCATGAT+TGG + contig235end:34458-34477 MsG0080048174.01.T01:intergenic 35.0%
TTCTACGAATGAAAGGATTC+TGG - contig235end:35687-35706 MsG0080048174.01.T01:intron 35.0%
TTTGGAGGTTGAAAAGTTGA+AGG - contig235end:36702-36721 MsG0080048174.01.T01:intron 35.0%
! AAAAACAGCGAACTTTGGAA+TGG + contig235end:30411-30430 MsG0080048174.01.T01:intergenic 35.0%
! AATGGAGCATCAAGAAATGA+AGG - contig235end:33830-33849 MsG0080048174.01.T01:intron 35.0%
! AGACACTTGTTGAAAGCAAA+AGG - contig235end:36805-36824 MsG0080048174.01.T01:CDS 35.0%
! ATTTGGCATTTGCTGCATTA+GGG - contig235end:36512-36531 MsG0080048174.01.T01:intron 35.0%
! CAAAAGCATGTATCAAGAGT+GGG + contig235end:30528-30547 MsG0080048174.01.T01:intergenic 35.0%
! CCAATTTTCCTTTCAAGGAT+TGG - contig235end:34771-34790 MsG0080048174.01.T01:CDS 35.0%
! CTTTTTAACGACGGCAAAAT+TGG - contig235end:35452-35471 MsG0080048174.01.T01:intron 35.0%
! TAGAACTCTATCCCTTTTGA+CGG - contig235end:34250-34269 MsG0080048174.01.T01:intron 35.0%
! TTGTTTACATCGTTCCCTTT+TGG + contig235end:34107-34126 MsG0080048174.01.T01:intergenic 35.0%
! TTTTCCAAGGTGAATAAGTG+GGG + contig235end:34571-34590 MsG0080048174.01.T01:intergenic 35.0%
!! AAAACAGCGAACTTTGGAAT+GGG + contig235end:30410-30429 MsG0080048174.01.T01:intergenic 35.0%
!! ATAATGGATCTCACCTAAAG+TGG + contig235end:32579-32598 MsG0080048174.01.T01:intergenic 35.0%
!! ATCAAGTGTTGGCTCAATAT+TGG - contig235end:31916-31935 MsG0080048174.01.T01:intron 35.0%
!! CGTGCAAAAGGATTTTAAAG+GGG - contig235end:29684-29703 MsG0080048174.01.T01:CDS 35.0%
!! TAACAACGGTTTTATCGTGA+AGG - contig235end:36183-36202 MsG0080048174.01.T01:intron 35.0%
!! TTTTTATTTAAGTGGGGGGT+TGG - contig235end:33258-33277 MsG0080048174.01.T01:intron 35.0%
!!! ATAAGTATTGGCTTGGGTTT+TGG + contig235end:33592-33611 MsG0080048174.01.T01:intergenic 35.0%
!!! GACATGTATTTTGAAACGGA+GGG + contig235end:29793-29812 MsG0080048174.01.T01:intergenic 35.0%
!!! GATTTGGTTTTGCTTTAGGA+GGG - contig235end:29483-29502 MsG0080048174.01.T01:CDS 35.0%
!!! GGACATGTATTTTGAAACAG+AGG - contig235end:30022-30041 MsG0080048174.01.T01:intron 35.0%
!!! TAAGTATTGGCTTGGGTTTT+GGG + contig235end:33591-33610 MsG0080048174.01.T01:intergenic 35.0%
!!! TGATTTGGTTTTGCTTTAGG+AGG - contig235end:29482-29501 MsG0080048174.01.T01:CDS 35.0%
AATGCAAGTCAGAAGAACTG+GGG - contig235end:36121-36140 MsG0080048174.01.T01:intron 40.0%
ACCTCTTTGTCGTATAATCG+GGG - contig235end:32351-32370 MsG0080048174.01.T01:intron 40.0%
ACCTTACCTACCTATTTGCA+TGG + contig235end:31946-31965 MsG0080048174.01.T01:intergenic 40.0%
AGACAATTATTGTGAGACGG+AGG + contig235end:30071-30090 MsG0080048174.01.T01:intergenic 40.0%
AGATTGTATCTCCTTGGCTT+TGG + contig235end:29098-29117 MsG0080048174.01.T01:intergenic 40.0%
AGCTGAGGTTTCAGTTTGTA+AGG - contig235end:36222-36241 MsG0080048174.01.T01:intron 40.0%
AGTAATCCCTCGTTCTTAAG+TGG - contig235end:32401-32420 MsG0080048174.01.T01:intron 40.0%
ATGCATTTCCCTACTACCAA+GGG + contig235end:34746-34765 MsG0080048174.01.T01:intergenic 40.0%
CAATGCAAGTCAGAAGAACT+GGG - contig235end:36120-36139 MsG0080048174.01.T01:intron 40.0%
CACGGTACATGATTATATGC+AGG - contig235end:34522-34541 MsG0080048174.01.T01:intron 40.0%
CAGCTTCATGATCCTAACAA+CGG - contig235end:36169-36188 MsG0080048174.01.T01:intron 40.0%
CATGTAAGTCTCACCACTTT+AGG - contig235end:32563-32582 MsG0080048174.01.T01:intron 40.0%
CCTAATGCAGATTGAACATG+AGG + contig235end:36658-36677 MsG0080048174.01.T01:intergenic 40.0%
CCTCATGTTCAATCTGCATT+AGG - contig235end:36655-36674 MsG0080048174.01.T01:intron 40.0%
CCTTACCTACCTATTTGCAT+GGG + contig235end:31945-31964 MsG0080048174.01.T01:intergenic 40.0%
CGACTATAATTTAGAGACGG+AGG - contig235end:30312-30331 MsG0080048174.01.T01:intron 40.0%
CGGTACATGATTATATGCAG+GGG - contig235end:34524-34543 MsG0080048174.01.T01:intron 40.0%
CTAGTTAGTATGACCCTGAT+CGG + contig235end:31587-31606 MsG0080048174.01.T01:intergenic 40.0%
CTGCCAATATGTTTAAGGGA+TGG - contig235end:34159-34178 MsG0080048174.01.T01:intron 40.0%
CTTGAAGATCCTTACAAGCT+TGG + contig235end:30868-30887 MsG0080048174.01.T01:intergenic 40.0%
GACAAAGTTGGATGTTGTTG+AGG - contig235end:31051-31070 MsG0080048174.01.T01:intron 40.0%
GACAATTATTGTGAGACGGA+GGG + contig235end:30070-30089 MsG0080048174.01.T01:intergenic 40.0%
GACCTCTTTGTCGTATAATC+GGG - contig235end:32350-32369 MsG0080048174.01.T01:intron 40.0%
GAGCTAAACTCGTGAAAGTA+TGG + contig235end:36150-36169 MsG0080048174.01.T01:intergenic 40.0%
GAGCTTAAGAATCCTGAAAG+AGG - contig235end:30617-30636 MsG0080048174.01.T01:intron 40.0%
GATGTGAATTGGACCATGAA+AGG - contig235end:35724-35743 MsG0080048174.01.T01:intron 40.0%
GCTCCATCCCTTAAACATAT+TGG + contig235end:34165-34184 MsG0080048174.01.T01:intergenic 40.0%
GGAATTGGAAGTCCCAAATA+TGG - contig235end:36321-36340 MsG0080048174.01.T01:CDS 40.0%
GTGCAAACTAGTGTAGAAAC+TGG + contig235end:36358-36377 MsG0080048174.01.T01:intergenic 40.0%
GTGGAAAAGGGTAAAACGAA+TGG - contig235end:33048-33067 MsG0080048174.01.T01:intron 40.0%
GTGGGTTTAGTTGTGTGAAA+AGG + contig235end:30510-30529 MsG0080048174.01.T01:intergenic 40.0%
TATGATAGAGGAAAATCCCC+AGG + contig235end:30588-30607 MsG0080048174.01.T01:intergenic 40.0%
TATGCATTTCCCTACTACCA+AGG + contig235end:34747-34766 MsG0080048174.01.T01:intergenic 40.0%
TCAATGCAAGTCAGAAGAAC+TGG - contig235end:36119-36138 MsG0080048174.01.T01:intron 40.0%
TCACGAGTTCAATGCAAATG+AGG - contig235end:30559-30578 MsG0080048174.01.T01:intron 40.0%
TGAAACAAGCAACATGGAAG+TGG - contig235end:30754-30773 MsG0080048174.01.T01:intron 40.0%
TGAAGGACCTTAAACACAGA+TGG - contig235end:32292-32311 MsG0080048174.01.T01:intron 40.0%
TGGATGTGAAACAAGCAACA+TGG - contig235end:30748-30767 MsG0080048174.01.T01:intron 40.0%
TGTTTGTATTGTTGGAGCTG+AGG - contig235end:36207-36226 MsG0080048174.01.T01:intron 40.0%
TTAACTACATCAGTGACAGG+TGG - contig235end:30728-30747 MsG0080048174.01.T01:intron 40.0%
TTCAGTGGTTAGGATTTCAC+TGG + contig235end:29738-29757 MsG0080048174.01.T01:intergenic 40.0%
TTGAACTCGTGATCAGATTC+TGG + contig235end:30551-30570 MsG0080048174.01.T01:intergenic 40.0%
TTGGCATGTCTTTCCTTTCA+TGG + contig235end:35740-35759 MsG0080048174.01.T01:intergenic 40.0%
TTTAGCAACGAGAAGCTATG+TGG - contig235end:30958-30977 MsG0080048174.01.T01:intron 40.0%
TTTCCTTTCAAGGATTGGAG+TGG - contig235end:34776-34795 MsG0080048174.01.T01:CDS 40.0%
TTTGGTCAAGAAACCGATCA+GGG - contig235end:31571-31590 MsG0080048174.01.T01:intron 40.0%
! AATGGATTCTCTCTAGTGAC+TGG - contig235end:29707-29726 MsG0080048174.01.T01:CDS 40.0%
! CTCTTTTATGGAGCACAAGA+GGG + contig235end:32179-32198 MsG0080048174.01.T01:intergenic 40.0%
! GATTTGGCATTTGCTGCATT+AGG - contig235end:36511-36530 MsG0080048174.01.T01:intron 40.0%
! GCAAAAGCATGTATCAAGAG+TGG + contig235end:30529-30548 MsG0080048174.01.T01:intergenic 40.0%
! GCCAATGACCTTCTTTTGTT+TGG - contig235end:31990-32009 MsG0080048174.01.T01:CDS 40.0%
! GGTAACGCTAGTTCTTGAAA+CGG - contig235end:36732-36751 MsG0080048174.01.T01:intron 40.0%
! TAAAAAGGCAGAGGCATACA+TGG + contig235end:32265-32284 MsG0080048174.01.T01:intergenic 40.0%
! TACTCCGATTCTTTTGTCCT+CGG - contig235end:33918-33937 MsG0080048174.01.T01:intron 40.0%
! TCTAGAGCTTGAAATGGAGA+GGG - contig235end:31024-31043 MsG0080048174.01.T01:intron 40.0%
! TCTCTTTTATGGAGCACAAG+AGG + contig235end:32180-32199 MsG0080048174.01.T01:intergenic 40.0%
! TTATGTGGAGAAAGCTTTGG+AGG - contig235end:36687-36706 MsG0080048174.01.T01:intron 40.0%
! TTTACCCTTTTCCACAACAG+AGG + contig235end:33043-33062 MsG0080048174.01.T01:intergenic 40.0%
! TTTTGGTCAAGAAACCGATC+AGG - contig235end:31570-31589 MsG0080048174.01.T01:intron 40.0%
!! CTCTCGTGTGAAAGTATCTA+CGG + contig235end:30379-30398 MsG0080048174.01.T01:intergenic 40.0%
!! TAAGTGGTTGGCTGCATTTT+TGG + contig235end:29530-29549 MsG0080048174.01.T01:intergenic 40.0%
!! TGACCTTCTTTTGTTTGGAG+AGG - contig235end:31995-32014 MsG0080048174.01.T01:CDS 40.0%
!! TTGAGCTCATGGTTAGTTTC+TGG + contig235end:36103-36122 MsG0080048174.01.T01:intergenic 40.0%
!!! CTTTTTATGTGTGACGGGTA+CGG - contig235end:33685-33704 MsG0080048174.01.T01:intron 40.0%
!!! GGACATGTATTTTGAAACGG+AGG + contig235end:29794-29813 MsG0080048174.01.T01:intergenic 40.0%
!!! GGTTTTGGTTTTGGTTTAGG+AGG - contig235end:34069-34088 MsG0080048174.01.T01:intron 40.0%
!!! TTTTTATGTGTGACGGGTAC+GGG - contig235end:33686-33705 MsG0080048174.01.T01:intron 40.0%
AACAAGCAACATGGAAGTGG+AGG - contig235end:30757-30776 MsG0080048174.01.T01:intron 45.0%
AACACCCCACTTATTCACCT+TGG - contig235end:34564-34583 MsG0080048174.01.T01:intron 45.0%
AACGAGAAGCTATGTGGAGA+AGG - contig235end:30964-30983 MsG0080048174.01.T01:intron 45.0%
AATTAGGATGTGGGAGTTGG+AGG - contig235end:36854-36873 MsG0080048174.01.T01:CDS 45.0%
ACATGATTATATGCAGGGGC+TGG - contig235end:34528-34547 MsG0080048174.01.T01:intron 45.0%
ACCTCGTGTGATTGTCATGT+TGG + contig235end:34231-34250 MsG0080048174.01.T01:intergenic 45.0%
ACGACAAAGAGGTCTTCTCT+GGG + contig235end:32344-32363 MsG0080048174.01.T01:intergenic 45.0%
AGCCTCCTATTTCACTGAGA+CGG + contig235end:32849-32868 MsG0080048174.01.T01:intergenic 45.0%
AGGCCTCTCCAAACAAAAGA+AGG + contig235end:32001-32020 MsG0080048174.01.T01:intergenic 45.0%
AGGCTCAGATTGTATCTCCT+TGG + contig235end:29104-29123 MsG0080048174.01.T01:intergenic 45.0%
AGGGTGTGTCTGTTTCCAAA+GGG - contig235end:29502-29521 MsG0080048174.01.T01:CDS 45.0%
ATCCCAACCACTTAAGAACG+AGG + contig235end:32411-32430 MsG0080048174.01.T01:intergenic 45.0%
ATCCCTCGTTCTTAAGTGGT+TGG - contig235end:32405-32424 MsG0080048174.01.T01:intron 45.0%
CAAACCGCTAACATGTCTAG+GGG - contig235end:29571-29590 MsG0080048174.01.T01:CDS 45.0%
CACTCCTCTGTTGTGGAAAA+GGG - contig235end:33036-33055 MsG0080048174.01.T01:intron 45.0%
CCCATGCAAATAGGTAGGTA+AGG - contig235end:31942-31961 MsG0080048174.01.T01:intron 45.0%
CGAGTTCAATGCAAATGAGG+AGG - contig235end:30562-30581 MsG0080048174.01.T01:intron 45.0%
CTGAATTAGGATGTGGGAGT+TGG - contig235end:36851-36870 MsG0080048174.01.T01:CDS 45.0%
GATTCTCTCTAGTGACTGGA+GGG - contig235end:29711-29730 MsG0080048174.01.T01:CDS 45.0%
GATTTGTCACTCCTCTGTTG+TGG - contig235end:33029-33048 MsG0080048174.01.T01:intron 45.0%
GCAAACCGCTAACATGTCTA+GGG - contig235end:29570-29589 MsG0080048174.01.T01:CDS 45.0%
GCACTAAACCTACTGACACA+GGG - contig235end:36374-36393 MsG0080048174.01.T01:CDS 45.0%
GCTAAATAGCCCACCCAAAT+TGG - contig235end:33522-33541 MsG0080048174.01.T01:intron 45.0%
GGAAACCCATGCAAATAGGT+AGG - contig235end:31937-31956 MsG0080048174.01.T01:intron 45.0%
GGAGAGGGTAAAGACAAAGT+TGG - contig235end:31039-31058 MsG0080048174.01.T01:intron 45.0%
GGCTGAGACTCAATAAGTGA+AGG + contig235end:36469-36488 MsG0080048174.01.T01:intergenic 45.0%
GTAATGACGCGACTCTTCTT+CGG + contig235end:36490-36509 MsG0080048174.01.T01:intergenic 45.0%
GTGAAGGATGCTTGTATCGT+TGG - contig235end:30647-30666 MsG0080048174.01.T01:intron 45.0%
TACGACAAAGAGGTCTTCTC+TGG + contig235end:32345-32364 MsG0080048174.01.T01:intergenic 45.0%
TATGGTGAGTGGTGTGCTAA+GGG + contig235end:31669-31688 MsG0080048174.01.T01:intergenic 45.0%
TCACTCCTCTGTTGTGGAAA+AGG - contig235end:33035-33054 MsG0080048174.01.T01:intron 45.0%
TCCCAACCACTTAAGAACGA+GGG + contig235end:32410-32429 MsG0080048174.01.T01:intergenic 45.0%
TCCCTCGTTCTTAAGTGGTT+GGG - contig235end:32406-32425 MsG0080048174.01.T01:intron 45.0%
TCTGAGCCTTTCGTTCTTTG+CGG - contig235end:29115-29134 MsG0080048174.01.T01:CDS 45.0%
TCTGGAGGCTGAAAAGTTGA+AGG - contig235end:30988-31007 MsG0080048174.01.T01:intron 45.0%
TCTTGAAACGGAGAGGCTAA+AGG - contig235end:36744-36763 MsG0080048174.01.T01:intron 45.0%
TGAACAAGCTGATGCAGAGT+TGG - contig235end:30787-30806 MsG0080048174.01.T01:intron 45.0%
TGCAAACCGCTAACATGTCT+AGG - contig235end:29569-29588 MsG0080048174.01.T01:CDS 45.0%
TGCACTAAACCTACTGACAC+AGG - contig235end:36373-36392 MsG0080048174.01.T01:CDS 45.0%
TGTTTGAGTCCCGTAGCATT+TGG - contig235end:33298-33317 MsG0080048174.01.T01:intron 45.0%
TTATGGTGAGTGGTGTGCTA+AGG + contig235end:31670-31689 MsG0080048174.01.T01:intergenic 45.0%
TTCTCTTCCCTTCGTGCAAA+AGG - contig235end:29672-29691 MsG0080048174.01.T01:CDS 45.0%
TTGTCGTATAATCGGGGCAA+CGG - contig235end:32357-32376 MsG0080048174.01.T01:intron 45.0%
! ATTCTCTCCGGTGCCAATTT+GGG + contig235end:33538-33557 MsG0080048174.01.T01:intergenic 45.0%
! TCTGACTTGCATTGAGCTCA+TGG + contig235end:36114-36133 MsG0080048174.01.T01:intergenic 45.0%
! TGTTGAGGTTGATCGTGATG+TGG - contig235end:31066-31085 MsG0080048174.01.T01:intron 45.0%
!! CGAACCTTTTAATTCAGGCC+CGG + contig235end:33362-33381 MsG0080048174.01.T01:intergenic 45.0%
!! CTCTAGAGCTTGAAATGGAG+AGG - contig235end:31023-31042 MsG0080048174.01.T01:intron 45.0%
!! GGTAGCTCTAGAGCTTGAAA+TGG - contig235end:31018-31037 MsG0080048174.01.T01:intron 45.0%
!! TTGGAGTGGTGGTGGAATTT+AGG - contig235end:34790-34809 MsG0080048174.01.T01:CDS 45.0%
!! AAATAAATATATATAAGTAT+TGG + contig235end:33604-33623 MsG0080048174.01.T01:intergenic 5.0%
!!! ATATATTTTTTTATTTAAGT+GGG - contig235end:33251-33270 MsG0080048174.01.T01:intron 5.0%
!!! ATTTTAAACTTTAAAAATTA+TGG + contig235end:34358-34377 MsG0080048174.01.T01:intergenic 5.0%
AAGCTATGTGGAGAAGGCTC+TGG - contig235end:30970-30989 MsG0080048174.01.T01:intron 50.0%
AAGGCCGGGCCTGAATTAAA+AGG - contig235end:33355-33374 MsG0080048174.01.T01:intron 50.0%
AAGTAGTTGTGCAGCACTGC+CGG - contig235end:33636-33655 MsG0080048174.01.T01:intron 50.0%
AATGCAAATGAGGAGGCCTG+GGG - contig235end:30569-30588 MsG0080048174.01.T01:intron 50.0%
AGCTGATGCAGAGTTGGCAT+TGG - contig235end:30793-30812 MsG0080048174.01.T01:intron 50.0%
AGGGTTGTTCTCACCCTCAA+TGG - contig235end:36393-36412 MsG0080048174.01.T01:intron 50.0%
CAATGCAAATGAGGAGGCCT+GGG - contig235end:30568-30587 MsG0080048174.01.T01:intron 50.0%
CCACCACTCCAATCCTTGAA+AGG + contig235end:34782-34801 MsG0080048174.01.T01:intergenic 50.0%
CCATCCCCTAGACATGTTAG+CGG + contig235end:29578-29597 MsG0080048174.01.T01:intergenic 50.0%
CCTTTCAAGGATTGGAGTGG+TGG - contig235end:34779-34798 MsG0080048174.01.T01:CDS 50.0%
CGACAAAGAGGTCTTCTCTG+GGG + contig235end:32343-32362 MsG0080048174.01.T01:intergenic 50.0%
CTGATGCAGAGTTGGCATTG+GGG - contig235end:30795-30814 MsG0080048174.01.T01:intron 50.0%
CTTTGCGGCTATCCATGGTA+AGG - contig235end:29130-29149 MsG0080048174.01.T01:CDS 50.0%
GAATCGAACGTGAGACCTTG+CGG - contig235end:33554-33573 MsG0080048174.01.T01:intron 50.0%
GACAAAGAGGTCTTCTCTGG+GGG + contig235end:32342-32361 MsG0080048174.01.T01:intergenic 50.0%
GAGAACAACCCTGTGTCAGT+AGG + contig235end:36385-36404 MsG0080048174.01.T01:intergenic 50.0%
GCCAACATGACAATCACACG+AGG - contig235end:34227-34246 MsG0080048174.01.T01:intron 50.0%
GCCCCGATTATACGACAAAG+AGG + contig235end:32355-32374 MsG0080048174.01.T01:intergenic 50.0%
GCTGATGCAGAGTTGGCATT+GGG - contig235end:30794-30813 MsG0080048174.01.T01:intron 50.0%
GGATAGCCGCAAAGAACGAA+AGG + contig235end:29124-29143 MsG0080048174.01.T01:intergenic 50.0%
GGATTCTCTCTAGTGACTGG+AGG - contig235end:29710-29729 MsG0080048174.01.T01:CDS 50.0%
GGGTGTGTCTGTTTCCAAAG+GGG - contig235end:29503-29522 MsG0080048174.01.T01:CDS 50.0%
GTCTCACGTTCGATTCTCTC+CGG + contig235end:33550-33569 MsG0080048174.01.T01:intergenic 50.0%
TCAATGCAAATGAGGAGGCC+TGG - contig235end:30567-30586 MsG0080048174.01.T01:intron 50.0%
TCCGCCGAGGACAAAAGAAT+CGG + contig235end:33925-33944 MsG0080048174.01.T01:intergenic 50.0%
TCGTTCTTTGCGGCTATCCA+TGG - contig235end:29125-29144 MsG0080048174.01.T01:CDS 50.0%
TGCAACGTGCTCAACTAGGT+CGG + contig235end:33328-33347 MsG0080048174.01.T01:intergenic 50.0%
TTCAAGGATTGGAGTGGTGG+TGG - contig235end:34782-34801 MsG0080048174.01.T01:CDS 50.0%
TTCATGGACTCTCTGACCCT+TGG - contig235end:34727-34746 MsG0080048174.01.T01:intron 50.0%
TTGAGTCCCGTAGCATTTGG+AGG - contig235end:33301-33320 MsG0080048174.01.T01:intron 50.0%
TTTAATTCAGGCCCGGCCTT+GGG + contig235end:33355-33374 MsG0080048174.01.T01:intergenic 50.0%
! ACTCTCTGACCCTTGGTAGT+AGG - contig235end:34734-34753 MsG0080048174.01.T01:intron 50.0%
! CGCTAGTTCTTGAAACGGAG+AGG - contig235end:36737-36756 MsG0080048174.01.T01:intron 50.0%
! CTCTCTGACCCTTGGTAGTA+GGG - contig235end:34735-34754 MsG0080048174.01.T01:intron 50.0%
! GAGGGTGTGTCTGTTTCCAA+AGG - contig235end:29501-29520 MsG0080048174.01.T01:CDS 50.0%
! GAGTCGCGTCATTACCGATT+TGG - contig235end:36495-36514 MsG0080048174.01.T01:intron 50.0%
! GATTCTCTCCGGTGCCAATT+TGG + contig235end:33539-33558 MsG0080048174.01.T01:intergenic 50.0%
! GGCATTTGCTGCATTAGGGA+GGG - contig235end:36516-36535 MsG0080048174.01.T01:intron 50.0%
! GGTGAATAAGTGGGGTGTTC+CGG + contig235end:34563-34582 MsG0080048174.01.T01:intergenic 50.0%
! TCCGATTCTTTTGTCCTCGG+CGG - contig235end:33921-33940 MsG0080048174.01.T01:intron 50.0%
! TGGCATTTGCTGCATTAGGG+AGG - contig235end:36515-36534 MsG0080048174.01.T01:intron 50.0%
!! TTTTAATTCAGGCCCGGCCT+TGG + contig235end:33356-33375 MsG0080048174.01.T01:intergenic 50.0%
!!! GCTGCATTTTTGGTCCCCTT+TGG + contig235end:29520-29539 MsG0080048174.01.T01:intergenic 50.0%
ATGTGGGAGTTGGAGGCCAT+AGG - contig235end:36861-36880 MsG0080048174.01.T01:CDS 55.0%
CAGGGCCGTCTCAGTGAAAT+AGG - contig235end:32841-32860 MsG0080048174.01.T01:intron 55.0%
CATACCATGGATATCCGCCG+AGG + contig235end:33938-33957 MsG0080048174.01.T01:intergenic 55.0%
CCGCTAACATGTCTAGGGGA+TGG - contig235end:29575-29594 MsG0080048174.01.T01:CDS 55.0%
GCAACGTGCTCAACTAGGTC+GGG + contig235end:33327-33346 MsG0080048174.01.T01:intergenic 55.0%
GGAGTGCAACGTGCTCAACT+AGG + contig235end:33332-33351 MsG0080048174.01.T01:intergenic 55.0%
GGCCGTCTCAGTGAAATAGG+AGG - contig235end:32844-32863 MsG0080048174.01.T01:intron 55.0%
TAGCCCACCCAAATTGGCAC+CGG - contig235end:33528-33547 MsG0080048174.01.T01:intron 55.0%
TAGGGGATGGAGCAGAGATG+TGG - contig235end:29588-29607 MsG0080048174.01.T01:CDS 55.0%
TTAATTCAGGCCCGGCCTTG+GGG + contig235end:33354-33373 MsG0080048174.01.T01:intergenic 55.0%
TTGTCCTCGGCGGATATCCA+TGG - contig235end:33931-33950 MsG0080048174.01.T01:intron 55.0%
! CTATGTGGAGAAGGCTCTGG+AGG - contig235end:30973-30992 MsG0080048174.01.T01:intron 55.0%
! TCTCCGGTGCCAATTTGGGT+GGG + contig235end:33534-33553 MsG0080048174.01.T01:intergenic 55.0%
!! CCTTGGCTTTGGCTTGCAAG+CGG + contig235end:29087-29106 MsG0080048174.01.T01:intergenic 55.0%
!! CTTGGCTTTGGCTTGCAAGC+GGG + contig235end:29086-29105 MsG0080048174.01.T01:intergenic 55.0%
CCGCTTGCAAGCCAAAGCCA+AGG - contig235end:29084-29103 MsG0080048174.01.T01:CDS 60.0%
GGTCGGGCCTCCAAATGCTA+CGG + contig235end:33311-33330 MsG0080048174.01.T01:intergenic 60.0%
GTCGGGCCTCCAAATGCTAC+GGG + contig235end:33310-33329 MsG0080048174.01.T01:intergenic 60.0%
TAATTCAGGCCCGGCCTTGG+GGG + contig235end:33353-33372 MsG0080048174.01.T01:intergenic 60.0%
TCGAACGTGAGACCTTGCGG+AGG - contig235end:33557-33576 MsG0080048174.01.T01:intron 60.0%
! CTCTCCGGTGCCAATTTGGG+TGG + contig235end:33535-33554 MsG0080048174.01.T01:intergenic 60.0%
ACGTTGCACTCCCCCAAGGC+CGG - contig235end:33340-33359 MsG0080048174.01.T01:intron 65.0%
CAGGGGCTGGAGTTCGAAGC+CGG - contig235end:34541-34560 MsG0080048174.01.T01:intron 65.0%
GAGCACGTTGCACTCCCCCA+AGG - contig235end:33336-33355 MsG0080048174.01.T01:intron 65.0%
! TGGGAGTGTGCTCCTCCGCA+AGG + contig235end:33572-33591 MsG0080048174.01.T01:intergenic 65.0%
CGTTGCACTCCCCCAAGGCC+GGG - contig235end:33341-33360 MsG0080048174.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
contig235end gene 29019 36882 29019 ID=MsG0080048174.01;Name=MsG0080048174.01
contig235end mRNA 29019 36882 29019 ID=MsG0080048174.01.T01;Parent=MsG0080048174.01;Name=MsG0080048174.01.T01;_AED=0.40;_eAED=0.60;_QI=0|0|0|0.91|0.81|0.75|12|0|677
contig235end exon 36755 36882 36755 ID=MsG0080048174.01.T01:exon:966;Parent=MsG0080048174.01.T01
contig235end exon 36237 36400 36237 ID=MsG0080048174.01.T01:exon:967;Parent=MsG0080048174.01.T01
contig235end exon 34755 35349 34755 ID=MsG0080048174.01.T01:exon:968;Parent=MsG0080048174.01.T01
contig235end exon 32224 32251 32224 ID=MsG0080048174.01.T01:exon:969;Parent=MsG0080048174.01.T01
contig235end exon 31949 32127 31949 ID=MsG0080048174.01.T01:exon:970;Parent=MsG0080048174.01.T01
contig235end exon 31653 31813 31653 ID=MsG0080048174.01.T01:exon:971;Parent=MsG0080048174.01.T01
contig235end exon 29019 29797 29019 ID=MsG0080048174.01.T01:exon:972;Parent=MsG0080048174.01.T01
contig235end CDS 36755 36882 36755 ID=MsG0080048174.01.T01:cds;Parent=MsG0080048174.01.T01
contig235end CDS 36237 36400 36237 ID=MsG0080048174.01.T01:cds;Parent=MsG0080048174.01.T01
contig235end CDS 34755 35349 34755 ID=MsG0080048174.01.T01:cds;Parent=MsG0080048174.01.T01
contig235end CDS 32224 32251 32224 ID=MsG0080048174.01.T01:cds;Parent=MsG0080048174.01.T01
contig235end CDS 31949 32127 31949 ID=MsG0080048174.01.T01:cds;Parent=MsG0080048174.01.T01
contig235end CDS 31653 31813 31653 ID=MsG0080048174.01.T01:cds;Parent=MsG0080048174.01.T01
contig235end CDS 29019 29797 29019 ID=MsG0080048174.01.T01:cds;Parent=MsG0080048174.01.T01
Gene Sequence

>MsG0080048174.01.T01

ATGAATTACCAAGAATCAAGTGTTCAAAATTTTGAGAAATTTATCTGGAAGATTGAGAATTTCTCCCGCTTGCAAGCCAAAGCCAAGGAGATACAATCTGAGCCTTTCGTTCTTTGCGGCTATCCATGGAGGGTGTGTCTGTTTCCAAAGGGGACCAAAAATGCAGCCAACCACTTATCTATTTATTTGGAGGCTATGCAAACCGCTAACATGTCTAGGGGATGGAGCAGAGATGTGGAGCTGAAGTTCGCTGTTTTCAATCAGCTCAATATAGACAGAACAGTCACAAAAGAATCTGATCACGAGTTCAATGCAAATGAGGAGGCCTGGGGATTTTCCTCTATCATAGCATTATCTGAGCTTAAGAATCCTGAAAGAGGATTTATTGTGAAGGATGCTTGTATCGTTGGTGTAGAAGTTTTTGTTCGTAAGTCAACAAACGAGAAACCACTAAATCAAGCTCTTAAATTAACTACATCAGTGACAGGTGGATGTGAAACAAGCAACATGGAAGTGGAGGTTTGCAATGAACAAGCTGATGCAGAGTTGGCATTGGGGAGAGTTATGTATTTTCTTAAGACTAAAAAAGTGAAAGACATGAATGAACAAGCTTGTAAGGATCTTCAAGCTTTATGGGATGAACTCAAGAAATTTAATAAATTTGATGCGGCTTGGCTAGAGCCCACTGTTCAATCTTCTTTAGCAACGAGAAGCTATGTGGAGAAGGCTCTGGAGGCTGAAAAGTTGAAGGAGTATATGGTAGCTCTAGAGCTTGAAATGGAGAGGGTAAAGACAAAGTTGGATGTTGTTGAGGTTGATCGTGATGTGGAAAGAGACATATTGAAAGGGAAAGGCTTCAAAGAAATAAATTTAGATTCTAAATTGGACACTGCCGGTACATATCTTGATCTTATGTGTTTTACTGTGTCTATTTTTGTTAATTTTAACTGCATATTTTTCCCATTTGTAGAAATGGAGCATCAAGAAATGAAGGATGAGATATTTGAGAAATTTACATGGAAGATTGAGAACTTCTCTCGTTTGAACACTAATGAGCTTTACTCCGATTCTTTTGTCCTCGGCGGATATCCATGGAGGATTCTTATGTTTCCAAAAGGGAACGATGTAAACAACAGTTTATCAATATATTTGGAAGCTATGCAAACTGCCAATATGTTTAAGGGATGGAGCAGAGATGTGAAATTTAAACTGCTTGTATTCAATCAGATCAATGCCAACATGACAATCACACGAGAAACTAACCATGAGCTCAATGCAAGTCAGAAGAACTGGGGTTTCCATACTTTCACGAGTTTAGCTCAGCTTCATGATCCTAACAACGGTTTTATCGTGAAGGATGTTTGTATTGTTGGAGCTGAGGTTTCAGTTTGTAAGGTAACACATGAGAACAAAGTGAATCAAGAAGCGAACTTAGCTGTTTTCCTAACATCTGAAAGTCAAAATGTGCATATGGAATTGGAAGTCCCAAATATGGAAACTATTTCACCAGTTTCTACACTAGTTTGCACTAAACCTACTGACACAGGGTTGTTCTCACCCTCAATGGAAAAAATTATGGATTTCAGTAGTGTAGAACAATTAGAGGAAATATATAATCCTTCACTTATTGAGTCTCAGCCGAAGAAGAGTCGCGTCATTACCGATTTGGCATTTGCTGCATTAGGGAGGGTTTTTTATTTCTTTAAGACTAAAAAAGTGAAAGATATGAATGACCAAGCTTGTAAGGATCTTCAAGTTTTATGGGATGAACTTAAGAAATTTAGATTTGATGTCACTTGGCTAGAGCCTCATGTTCAATCTGCATTAGGAATGAAAAGTTATGTGGAGAAAGCTTTGGAGGTTGAAAAGTTGAAGGAGAATGTGGTAACGCTAGTTCTTGAAACGGAGAGGCTAAAGGCAAAGTTGCTTGCTGCTGAAGTAAATCTTGACATAGAAAGACACTTGTTGAAAGCAAAAGGCTTCAAAGAAATAGATTTAAATTCTGAATTAGGATGTGGGAGTTGGAGGCCATAG
Protein sequence

>MsG0080048174.01.T01

MNYQESSVQNFEKFIWKIENFSRLQAKAKEIQSEPFVLCGYPWRVCLFPKGTKNAANHLSIYLEAMQTANMSRGWSRDVELKFAVFNQLNIDRTVTKESDHEFNANEEAWGFSSIIALSELKNPERGFIVKDACIVGVEVFVRKSTNEKPLNQALKLTTSVTGGCETSNMEVEVCNEQADAELALGRVMYFLKTKKVKDMNEQACKDLQALWDELKKFNKFDAAWLEPTVQSSLATRSYVEKALEAEKLKEYMVALELEMERVKTKLDVVEVDRDVERDILKGKGFKEINLDSKLDTAGTYLDLMCFTVSIFVNFNCIFFPFVEMEHQEMKDEIFEKFTWKIENFSRLNTNELYSDSFVLGGYPWRILMFPKGNDVNNSLSIYLEAMQTANMFKGWSRDVKFKLLVFNQINANMTITRETNHELNASQKNWGFHTFTSLAQLHDPNNGFIVKDVCIVGAEVSVCKVTHENKVNQEANLAVFLTSESQNVHMELEVPNMETISPVSTLVCTKPTDTGLFSPSMEKIMDFSSVEQLEEIYNPSLIESQPKKSRVITDLAFAALGRVFYFFKTKKVKDMNDQACKDLQVLWDELKKFRFDVTWLEPHVQSALGMKSYVEKALEVEKLKENVVTLVLETERLKAKLLAAEVNLDIERHLLKAKGFKEIDLNSELGCGSWRP*