AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042106.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042106.01.T01 MTR_8g011730 90.196 357 27 2 211 560 1 356 0.0 661
MsG0880042106.01.T01 MTR_8g011730 70.352 199 54 2 15 209 8 205 1.60e-89 280
MsG0880042106.01.T01 MTR_7g107200 33.862 378 206 9 218 558 6 376 3.78e-60 204
MsG0880042106.01.T01 MTR_7g107200 29.719 249 125 8 1 209 1 239 1.19e-22 100
MsG0880042106.01.T01 MTR_7g107160 27.723 505 279 15 78 557 1 444 2.18e-50 180
MsG0880042106.01.T01 MTR_7g107160 37.778 135 77 2 20 147 129 263 1.33e-20 95.1
MsG0880042106.01.T01 MTR_1g042160 29.745 353 174 7 223 556 11 308 5.75e-41 150
MsG0880042106.01.T01 MTR_1g042160 38.065 155 93 2 20 173 12 164 2.58e-26 109
MsG0880042106.01.T01 MTR_7g107170 38.596 171 91 2 401 559 98 266 8.45e-32 124
MsG0880042106.01.T01 MTR_8g011750 53.435 131 24 1 429 559 90 183 1.04e-26 107
MsG0880042106.01.T01 MTR_2g034780 40.909 132 73 2 414 545 117 243 3.55e-25 105
MsG0880042106.01.T01 MTR_3g079840 37.908 153 79 4 21 161 57 205 3.72e-24 107
MsG0880042106.01.T01 MTR_3g079840 36.232 138 80 4 216 352 51 181 1.27e-20 97.1
MsG0880042106.01.T01 MTR_3g079840 37.908 153 79 4 21 161 56 204 3.86e-24 107
MsG0880042106.01.T01 MTR_3g079840 36.232 138 80 4 216 352 50 180 1.31e-20 96.7
MsG0880042106.01.T01 MTR_5g086700 36.970 165 85 5 9 161 52 209 4.77e-24 107
MsG0880042106.01.T01 MTR_5g086700 35.811 148 86 4 206 352 46 185 1.19e-20 97.1
MsG0880042106.01.T01 MTR_5g086700 36.970 165 85 5 9 161 52 209 4.91e-24 107
MsG0880042106.01.T01 MTR_5g086700 35.811 148 86 4 206 352 46 185 1.18e-20 97.1
MsG0880042106.01.T01 MTR_1g041240 39.370 127 73 2 21 147 59 181 5.44e-23 104
MsG0880042106.01.T01 MTR_1g041240 38.760 129 75 2 223 351 57 181 3.26e-22 102
MsG0880042106.01.T01 MTR_1g041240 39.370 127 73 2 21 147 58 180 5.53e-23 104
MsG0880042106.01.T01 MTR_1g041240 38.760 129 75 2 223 351 56 180 3.32e-22 101
MsG0880042106.01.T01 MTR_1g041240 39.370 127 73 2 21 147 57 179 6.04e-23 103
MsG0880042106.01.T01 MTR_1g041240 38.760 129 75 2 223 351 55 179 3.59e-22 101
MsG0880042106.01.T01 MTR_5g091450 34.483 145 85 3 10 147 16 157 1.37e-22 102
MsG0880042106.01.T01 MTR_5g091450 30.435 161 97 5 214 362 17 174 2.73e-18 89.4
MsG0880042106.01.T01 MTR_5g091180 34.375 128 80 2 21 147 46 170 3.34e-18 89.0
MsG0880042106.01.T01 MTR_5g091180 32.026 153 93 4 225 369 46 195 1.31e-16 83.6
MsG0880042106.01.T01 MTR_5g091550 32.836 134 84 4 15 147 14 142 2.11e-15 79.3
MsG0880042106.01.T01 MTR_5g091550 29.487 156 98 5 223 370 17 168 3.43e-13 72.4
MsG0880042106.01.T01 MTR_5g091550 32.836 134 84 4 15 147 14 142 2.34e-15 79.3
MsG0880042106.01.T01 MTR_5g091550 29.231 130 87 3 223 351 17 142 7.75e-13 71.2
MsG0880042106.01.T01 MTR_4g123750 22.222 360 197 11 8 351 9 301 2.19e-14 74.7
MsG0880042106.01.T01 MTR_3g106700 27.333 150 97 2 13 152 398 545 2.55e-12 70.5
MsG0880042106.01.T01 MTR_8g006190 31.034 116 77 2 38 150 10 125 4.22e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042106.01.T01 AT3G11910 40.132 152 82 4 1 147 30 177 4.29e-24 107
MsG0880042106.01.T01 AT3G11910 37.931 145 83 4 208 351 39 177 6.04e-22 100
MsG0880042106.01.T01 AT3G11910 40.132 152 82 4 1 147 30 177 4.29e-24 107
MsG0880042106.01.T01 AT3G11910 37.931 145 83 4 208 351 39 177 6.04e-22 100
MsG0880042106.01.T01 AT3G11910 40.132 152 82 4 1 147 31 178 4.33e-24 107
MsG0880042106.01.T01 AT3G11910 37.931 145 83 4 208 351 40 178 6.05e-22 100
MsG0880042106.01.T01 AT3G11910 40.132 152 82 4 1 147 31 178 4.33e-24 107
MsG0880042106.01.T01 AT3G11910 37.931 145 83 4 208 351 40 178 6.05e-22 100
MsG0880042106.01.T01 AT5G06600 43.077 130 69 3 19 147 54 179 4.80e-24 107
MsG0880042106.01.T01 AT5G06600 35.484 155 85 4 208 351 29 179 4.81e-22 101
MsG0880042106.01.T01 AT5G06600 43.077 130 69 3 19 147 53 178 4.81e-24 107
MsG0880042106.01.T01 AT5G06600 35.484 155 85 4 208 351 28 178 4.52e-22 101
MsG0880042106.01.T01 AT5G06600 43.077 130 69 3 19 147 54 179 4.90e-24 107
MsG0880042106.01.T01 AT5G06600 35.484 155 85 4 208 351 29 179 4.60e-22 101
MsG0880042106.01.T01 AT3G58270 36.667 120 71 2 20 138 7 122 1.21e-16 82.0
MsG0880042106.01.T01 AT3G58270 29.293 297 186 9 225 509 8 292 3.90e-16 80.5
MsG0880042106.01.T01 AT3G58270 36.667 120 71 2 20 138 7 122 1.21e-16 82.0
MsG0880042106.01.T01 AT3G58270 29.293 297 186 9 225 509 8 292 3.90e-16 80.5
MsG0880042106.01.T01 AT3G58270 36.667 120 71 2 20 138 7 122 1.21e-16 82.0
MsG0880042106.01.T01 AT3G58270 29.293 297 186 9 225 509 8 292 3.90e-16 80.5
MsG0880042106.01.T01 AT3G58260 31.507 146 95 4 22 165 9 151 3.21e-16 80.5
MsG0880042106.01.T01 AT3G58260 22.823 333 197 12 226 547 9 292 1.92e-13 72.0
MsG0880042106.01.T01 AT3G58410 33.974 156 88 6 21 174 8 150 5.24e-16 79.7
MsG0880042106.01.T01 AT3G58410 27.711 332 196 16 224 544 7 305 1.49e-14 75.5
MsG0880042106.01.T01 AT3G58340 32.544 169 100 5 8 173 2 159 6.51e-16 79.3
MsG0880042106.01.T01 AT3G58340 31.783 129 83 3 224 351 7 131 4.98e-11 64.7
MsG0880042106.01.T01 AT3G58340 34.043 141 81 4 8 147 2 131 9.45e-16 79.0
MsG0880042106.01.T01 AT3G58340 31.783 129 83 3 224 351 7 131 6.21e-11 64.3
MsG0880042106.01.T01 AT3G17380 22.468 316 186 7 38 351 42 300 1.10e-15 78.6
MsG0880042106.01.T01 AT2G05410 31.138 167 103 4 22 179 9 172 5.01e-15 76.6
MsG0880042106.01.T01 AT2G05410 32.370 173 106 6 221 390 3 167 8.14e-12 67.0
MsG0880042106.01.T01 AT3G58250 30.000 160 109 2 21 179 10 167 1.24e-14 75.5
MsG0880042106.01.T01 AT3G58210 29.487 156 105 3 20 174 7 158 4.45e-14 73.9
MsG0880042106.01.T01 AT3G58370 32.164 171 102 4 20 179 8 175 1.57e-13 72.0
MsG0880042106.01.T01 AT3G58350 35.385 130 78 3 21 147 8 134 1.62e-13 72.0
MsG0880042106.01.T01 AT3G58350 35.385 130 78 3 21 147 8 134 1.62e-13 72.0
MsG0880042106.01.T01 AT3G58200 34.188 117 73 2 225 340 8 121 2.57e-13 71.6
MsG0880042106.01.T01 AT3G58200 32.203 118 76 2 20 136 7 121 1.18e-12 69.7
MsG0880042106.01.T01 AT5G26320 22.189 338 199 8 25 355 65 345 2.11e-12 69.3
MsG0880042106.01.T01 AT3G58410 32.051 156 77 6 21 174 29 157 5.54e-12 67.8
MsG0880042106.01.T01 AT2G01790 30.986 142 96 2 24 164 11 151 6.22e-11 63.9

Find 115 sgRNAs with CRISPR-Local

Find 329 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAACCATGGATAGCCTTTC+AGG 0.170273 8:-3765731 None:intergenic
TCAAAGAAAGTAGTTATTAT+TGG 0.174067 8:+3766289 MsG0880042106.01.T01:CDS
CCAATTGCAGATTCAAAATA+TGG 0.175455 8:-3771835 None:intergenic
GAAATTTCCTTGACAGAAAT+TGG 0.177224 8:-3766477 None:intergenic
GCCCTTGAAATCGACTAAAT+TGG 0.179140 8:-3771494 None:intergenic
GAGATTTCCTTGACAGAAAT+TGG 0.180225 8:-3771463 None:intergenic
CAAGTTCTTCCCATAAAATT+TGG 0.190981 8:-3771780 None:intergenic
GTGACAATTTAGTCGATTTC+AGG 0.192253 8:+3766514 MsG0880042106.01.T01:CDS
GGGTTGTTCTTGCTCCCTTT+TGG 0.270422 8:-3765855 None:intergenic
TTCTGTCAAGGAAATCTCTT+TGG 0.276435 8:+3771468 MsG0880042106.01.T01:CDS
GAGTTGTTCTCGTTCCCTTT+TGG 0.329267 8:-3770823 None:intergenic
TGTCGACAAGTTTGTACATT+TGG 0.331373 8:+3766314 MsG0880042106.01.T01:CDS
ACATATCTGCTCCACCCTTT+AGG 0.335250 8:-3765930 None:intergenic
AGAATTTGTAGAGAGGGATT+TGG 0.337842 8:+3771969 MsG0880042106.01.T01:CDS
TCATGGCATCCCTCACTCTT+AGG 0.346575 8:+3771565 MsG0880042106.01.T01:CDS
TGTCGACAAGTTCATACATT+TGG 0.371497 8:+3771303 MsG0880042106.01.T01:CDS
GTGAATTGATCGGTCGTCCC+TGG 0.385107 8:-3765651 None:intergenic
GGGTATGCTTTCTCTTCCTC+TGG 0.393097 8:-3771657 None:intergenic
CTTGTCATTATCAATTCTTT+CGG 0.397618 8:+3770852 MsG0880042106.01.T01:CDS
TTAGTCGATTTCAGGGGTAT+AGG 0.399857 8:+3766522 MsG0880042106.01.T01:CDS
TCAATGCAAGTAATTATTGC+TGG 0.402960 8:+3771278 MsG0880042106.01.T01:CDS
TGGATGCACTTCGCAACTCT+TGG 0.416130 8:+3766334 MsG0880042106.01.T01:CDS
GCTCCCTTACAGAAATAATC+CGG 0.423483 8:-3766395 None:intergenic
CCCTTGAAATCGACTAAATT+GGG 0.423925 8:-3771493 None:intergenic
TGAATTGATCGGTCGTCCCT+GGG 0.427968 8:-3765650 None:intergenic
GTCTCTATCAGAAACTGAAC+AGG 0.444956 8:+3771252 MsG0880042106.01.T01:intron
TGCTAGAGGAAGCATGTTCA+TGG 0.445186 8:+3771548 MsG0880042106.01.T01:CDS
CGGATTGTTATGAATCCAAA+AGG 0.446814 8:+3770808 MsG0880042106.01.T01:CDS
GCCCAATTTAGTCGATTTCA+AGG 0.448202 8:+3771492 MsG0880042106.01.T01:CDS
TGCAAGAGGAAGCATGTTCA+TGG 0.451060 8:+3771614 MsG0880042106.01.T01:CDS
GACAATTGTGAGCAAGGCAT+TGG 0.453163 8:-3770950 None:intergenic
CGGATTGTTATGAATCCAAA+AGG 0.453634 8:+3765840 MsG0880042106.01.T01:CDS
TTATCAATTTATTTGAATGT+TGG 0.454715 8:+3765891 MsG0880042106.01.T01:CDS
CCTCTGGTTGTCAACAATAG+TGG 0.457983 8:-3771641 None:intergenic
GAATGGGCATTAACAGCATT+AGG 0.460962 8:+3771691 MsG0880042106.01.T01:CDS
TACCCGTAGGTTTACAGAAT+GGG 0.462212 8:+3771675 MsG0880042106.01.T01:CDS
TTGACAGAAATTGGTTGTGC+TGG 0.467873 8:-3766468 None:intergenic
TAAACGCCTTCCACGGGTTG+TGG 0.470028 8:-3771333 None:intergenic
AAGCCCGGATTATTTCTGTA+AGG 0.478185 8:+3766391 MsG0880042106.01.T01:CDS
ATTGATAATGACAAGTAACC+TGG 0.484403 8:-3765876 None:intergenic
AAGATATGTAAATCTTGAGT+TGG 0.490436 8:+3770912 MsG0880042106.01.T01:CDS
TCGTCGTCCATGGGGACCAT+GGG 0.490523 8:-3770594 None:intergenic
TGACAATTTAGTCGATTTCA+GGG 0.492488 8:+3766515 MsG0880042106.01.T01:CDS
CCCTCACTCTTAGGCAAAGT+AGG 0.499238 8:+3771574 MsG0880042106.01.T01:CDS
AATTGCTCAATCGTCGTCCA+TGG 0.505928 8:-3770604 None:intergenic
AGAGATATGCAAATGTGAAA+AGG 0.508744 8:+3771875 MsG0880042106.01.T01:CDS
CAGATATGTAAATCTTGAGT+TGG 0.510067 8:+3765944 MsG0880042106.01.T01:CDS
ATACTTGTATTATTAAAGCT+CGG 0.511022 8:+3771365 MsG0880042106.01.T01:CDS
TGGGAAGAACTTGAGACAGT+TGG 0.519283 8:+3771790 MsG0880042106.01.T01:CDS
ATTATTTCTGTAAGGGAGCA+AGG 0.524837 8:+3766399 MsG0880042106.01.T01:CDS
TTAGTCGATTTCAAGGGCTT+AGG 0.525882 8:+3771499 MsG0880042106.01.T01:CDS
TCTGTAAGGGAGCAAGGGTA+TGG 0.526652 8:+3766405 MsG0880042106.01.T01:CDS
TGATCAAGAAGTTAGCAAGA+TGG 0.527799 8:+3771426 MsG0880042106.01.T01:CDS
AGGGATTTGGATGCTAAACT+AGG 0.527986 8:+3771982 MsG0880042106.01.T01:CDS
ATTATTTCTGTCAGTGAACA+CGG 0.528503 8:+3771388 MsG0880042106.01.T01:CDS
TAACTTTGTTCCACTGCAAG+AGG 0.530859 8:+3771600 MsG0880042106.01.T01:CDS
ATGCCCATTCTGTAAACCTA+CGG 0.531909 8:-3771678 None:intergenic
TTCACAATAAACGCCTTCCA+CGG 0.534253 8:-3771340 None:intergenic
AAAATTTGTTCCACTGCTAG+AGG 0.538904 8:+3771534 MsG0880042106.01.T01:CDS
AAGCTGTTAGGCTGCTGAGA+TGG 0.539608 8:+3770561 MsG0880042106.01.T01:intron
CTCCCTTACAGAAATAATCC+GGG 0.540519 8:-3766394 None:intergenic
TTGGATGCTAAACTAGGCTA+TGG 0.541199 8:+3771988 MsG0880042106.01.T01:CDS
ACCTTTGACAATTGTGAGCA+AGG 0.542077 8:-3770956 None:intergenic
TTGACAGAAATTGGTTGCGC+TGG 0.542252 8:-3771454 None:intergenic
TCACAATAAACGCCTTCCAC+GGG 0.542778 8:-3771339 None:intergenic
TCTTCCTGAAAGGCTATCCA+TGG 0.543293 8:+3765727 MsG0880042106.01.T01:CDS
AGCCCGGATTATTTCTGTAA+GGG 0.544363 8:+3766392 MsG0880042106.01.T01:CDS
TCAGAAAGTTTCTTCCTGAA+AGG 0.544381 8:+3765717 MsG0880042106.01.T01:CDS
CACTTCGCAACTCTTGGAGT+GGG 0.545439 8:+3766340 MsG0880042106.01.T01:CDS
GCATTGCTAACAATTGCAAA+AGG 0.549086 8:+3765987 MsG0880042106.01.T01:CDS
AAAACTTGTTCCCTTGCTTG+AGG 0.550545 8:+3766557 MsG0880042106.01.T01:CDS
ATACTTGTATTATTAAAGCC+CGG 0.551657 8:+3766376 MsG0880042106.01.T01:CDS
ATCGTCGTCCATGGGGACCA+TGG 0.551984 8:-3770595 None:intergenic
ATTGCTCAATCGTCGTCCAT+GGG 0.554088 8:-3770603 None:intergenic
TGCCCATTCTGTAAACCTAC+GGG 0.555117 8:-3771677 None:intergenic
GTACGTCTTAGAATCACATT+GGG 0.557415 8:-3765694 None:intergenic
CGATCAAGAAGTTAGTGAGA+TGG 0.569133 8:+3766437 MsG0880042106.01.T01:CDS
AGTACGTCTTAGAATCACAT+TGG 0.574179 8:-3765695 None:intergenic
ATACCCGTAGGTTTACAGAA+TGG 0.575376 8:+3771674 MsG0880042106.01.T01:CDS
TGAACATACTTCCTCAAGCA+AGG 0.576836 8:-3766568 None:intergenic
CCCAATTTAGTCGATTTCAA+GGG 0.577210 8:+3771493 MsG0880042106.01.T01:CDS
ATATATCCCCATGGTCCCCA+TGG 0.581426 8:+3770587 MsG0880042106.01.T01:CDS
GCAATTGAGAAGAAATCCCC+AGG 0.581773 8:+3765633 MsG0880042106.01.T01:CDS
GCCTACTTTGCCTAAGAGTG+AGG 0.586026 8:-3771575 None:intergenic
ATGCAAATGTGAAAAGGCTG+AGG 0.588552 8:+3771881 MsG0880042106.01.T01:CDS
AAAGGGAACGAGAACAACTC+TGG 0.589691 8:+3770826 MsG0880042106.01.T01:CDS
TGAACTCCACAACCCGTGGA+AGG 0.594970 8:+3771327 MsG0880042106.01.T01:CDS
AGCGCAACCAATTTCTGTCA+AGG 0.595473 8:+3771456 MsG0880042106.01.T01:CDS
GAACATGCTTCCTCTTGCAG+TGG 0.596932 8:-3771610 None:intergenic
AATCGTCCATGTGAATTGAT+CGG 0.597888 8:-3765661 None:intergenic
AGCACAACCAATTTCTGTCA+AGG 0.604647 8:+3766470 MsG0880042106.01.T01:CDS
TTCAAAATATGGCTTCAACC+AGG 0.606260 8:-3771824 None:intergenic
GCCTTGCTCACAATTGTCAA+AGG 0.607799 8:+3770955 MsG0880042106.01.T01:CDS
GCACTTCGCAACTCTTGGAG+TGG 0.609049 8:+3766339 MsG0880042106.01.T01:CDS
TTATTTCTGTAAGGGAGCAA+GGG 0.611815 8:+3766400 MsG0880042106.01.T01:CDS
GAACATGCTTCCTCTAGCAG+TGG 0.616961 8:-3771544 None:intergenic
GGATTGTTATGAATCCAAAA+GGG 0.625720 8:+3770809 MsG0880042106.01.T01:CDS
TTATTTCTGTCAGTGAACAC+GGG 0.626135 8:+3771389 MsG0880042106.01.T01:CDS
TTGATAATGACAAGTAACCT+GGG 0.628332 8:-3765875 None:intergenic
GGATTGTTATGAATCCAAAA+GGG 0.632540 8:+3765841 MsG0880042106.01.T01:CDS
GAACATACTTCCTCAAGCAA+GGG 0.632707 8:-3766567 None:intergenic
TGGATGAACTCCACAACCCG+TGG 0.638922 8:+3771323 MsG0880042106.01.T01:CDS
CCTACTTTGCCTAAGAGTGA+GGG 0.639551 8:-3771574 None:intergenic
CCACTATTGTTGACAACCAG+AGG 0.640085 8:+3771641 MsG0880042106.01.T01:CDS
CGACGATTGAGCAATTCACA+TGG 0.640508 8:+3770611 MsG0880042106.01.T01:CDS
GGAAGAGAAAGCATACCCGT+AGG 0.643866 8:+3771662 MsG0880042106.01.T01:CDS
AAGGCTGAGGAAGACTGTAG+AGG 0.657859 8:+3771894 MsG0880042106.01.T01:CDS
GACAATTTAGTCGATTTCAG+GGG 0.659868 8:+3766516 MsG0880042106.01.T01:CDS
CGTCGTCCATGGGGACCATG+GGG 0.663214 8:-3770593 None:intergenic
GGACGACCGATCAATTCACA+TGG 0.663616 8:+3765655 MsG0880042106.01.T01:CDS
TTGCTCAATCGTCGTCCATG+GGG 0.667857 8:-3770602 None:intergenic
AGATGGAGAATATATCCCCA+TGG 0.669547 8:+3770578 MsG0880042106.01.T01:CDS
AAAGGGAGCAAGAACAACCC+AGG 0.672868 8:+3765858 MsG0880042106.01.T01:CDS
GAATTGATCGGTCGTCCCTG+GGG 0.691397 8:-3765649 None:intergenic
CAATTGAGAAGAAATCCCCA+GGG 0.717237 8:+3765634 MsG0880042106.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTATAAAAAAAAAAT+TGG + Chr8:3769175-3769194 MsG0880042106.01.T01:intron 0.0%
!! AAATTAAATCCTAATTTAAA+TGG + Chr8:3768493-3768512 MsG0880042106.01.T01:intron 10.0%
!! AATAAAGAATAGTTTATATA+AGG - Chr8:3766223-3766242 None:intergenic 10.0%
!! ATAAAGAATAGTTTATATAA+GGG - Chr8:3766222-3766241 None:intergenic 10.0%
!! GTTAAAAACAATTTATATAA+AGG - Chr8:3771215-3771234 None:intergenic 10.0%
!! TTAAAAAAACTCAAATAATT+AGG + Chr8:3769513-3769532 MsG0880042106.01.T01:intron 10.0%
!!! AAGTTTTATTTGAATTAATT+AGG - Chr8:3768471-3768490 None:intergenic 10.0%
!!! AGTTTTATTTGAATTAATTA+GGG - Chr8:3768470-3768489 None:intergenic 10.0%
!!! ATTTTATTCATTTTAGTTTA+TGG - Chr8:3768889-3768908 None:intergenic 10.0%
!!! TACATTATTACTTTTATAAA+TGG - Chr8:3767172-3767191 None:intergenic 10.0%
!!! TATTTTTTTAAGAATATTAG+AGG - Chr8:3769663-3769682 None:intergenic 10.0%
!! AAAAGAAAATAAGCATAAAT+CGG - Chr8:3767596-3767615 None:intergenic 15.0%
!! ATAAAATAAAAAATTGTTGG+AGG + Chr8:3770338-3770357 MsG0880042106.01.T01:intron 15.0%
!! TTATATAAGGGATAAAAATA+TGG - Chr8:3766210-3766229 None:intergenic 15.0%
!! TTATCAATTTATTTGAATGT+TGG + Chr8:3765891-3765910 MsG0880042106.01.T01:CDS 15.0%
!! TTTATAGATTTCTATGATTA+AGG - Chr8:3767669-3767688 None:intergenic 15.0%
!!! AAAACTTTTTTTTTTGTAGT+AGG - Chr8:3769307-3769326 None:intergenic 15.0%
!!! AAAATCAATGCATTTAATTT+TGG + Chr8:3767549-3767568 MsG0880042106.01.T01:intron 15.0%
!!! AACAATTAGTTTTACATTTT+TGG + Chr8:3766023-3766042 MsG0880042106.01.T01:intron 15.0%
!!! AAGAGTTGATTTATTAAAAT+GGG - Chr8:3769635-3769654 None:intergenic 15.0%
!!! ATCTATTATTTTCAATTACA+AGG - Chr8:3769371-3769390 None:intergenic 15.0%
!!! ATTTTCTATACTGTATATAT+TGG + Chr8:3767874-3767893 MsG0880042106.01.T01:intron 15.0%
!!! TAAGAGTTGATTTATTAAAA+TGG - Chr8:3769636-3769655 None:intergenic 15.0%
!!! TATGACTATGTTTAATTTTT+AGG + Chr8:3770295-3770314 MsG0880042106.01.T01:intron 15.0%
!!! TTATTTATTTTGTCTCTAAA+AGG - Chr8:3769422-3769441 None:intergenic 15.0%
!!! TTCTTTTTGAACTATAAATA+TGG + Chr8:3767609-3767628 MsG0880042106.01.T01:intron 15.0%
!!! TTGAAATTTTATTACTTACT+TGG + Chr8:3771108-3771127 MsG0880042106.01.T01:intron 15.0%
!!! TTTTACATTTTTTTGGTATA+AGG + Chr8:3771000-3771019 MsG0880042106.01.T01:intron 15.0%
!! AAAATCAATAACAGATGTTA+TGG - Chr8:3766058-3766077 None:intergenic 20.0%
!! AATGAAATTAGAAATTGAAG+AGG - Chr8:3769896-3769915 None:intergenic 20.0%
!! ACAAAATATCAATATTGCAA+AGG + Chr8:3768010-3768029 MsG0880042106.01.T01:intron 20.0%
!! AGACCTATCAAAAAAAAAAA+TGG + Chr8:3768141-3768160 MsG0880042106.01.T01:intron 20.0%
!! AGTTCAAATTCTTAAATATC+AGG - Chr8:3768102-3768121 None:intergenic 20.0%
!! ATACTTGTATTATTAAAGCT+CGG + Chr8:3771365-3771384 MsG0880042106.01.T01:CDS 20.0%
!! ATAGATAATAACACAAATCT+AGG - Chr8:3766974-3766993 None:intergenic 20.0%
!! GACATAAATCAATTGAAAAT+TGG + Chr8:3770169-3770188 MsG0880042106.01.T01:intron 20.0%
!! GATTAATTTCTCTAAACAAA+TGG - Chr8:3767836-3767855 None:intergenic 20.0%
!! TAGATAATAACACAAATCTA+GGG - Chr8:3766973-3766992 None:intergenic 20.0%
!! TCAAAGAAAGTAGTTATTAT+TGG + Chr8:3766289-3766308 MsG0880042106.01.T01:CDS 20.0%
!! TGCTACAAATAATATACTTA+AGG - Chr8:3767719-3767738 None:intergenic 20.0%
!!! AAGAATGACTTTTCATTTTA+AGG + Chr8:3769208-3769227 MsG0880042106.01.T01:intron 20.0%
!!! ACAATTTTAATCTTCCTAAA+GGG + Chr8:3765916-3765935 MsG0880042106.01.T01:CDS 20.0%
!!! ACATTTTCTAAACACTAAAA+GGG + Chr8:3771723-3771742 MsG0880042106.01.T01:CDS 20.0%
!!! ACTTTCCTCTAATTTTTTAT+TGG + Chr8:3766155-3766174 MsG0880042106.01.T01:intron 20.0%
!!! ATATATCCAACTGTTTTTTA+TGG + Chr8:3769988-3770007 MsG0880042106.01.T01:intron 20.0%
!!! CAAATGCTTTTACATTTTTT+TGG + Chr8:3770993-3771012 MsG0880042106.01.T01:intron 20.0%
!!! CTTCCATTTTTTTTTTTGAT+AGG - Chr8:3768147-3768166 None:intergenic 20.0%
!!! GTGTTGATAATTTTTTAAGT+TGG + Chr8:3770071-3770090 MsG0880042106.01.T01:intron 20.0%
!!! TAATCATCTCCAAATTTTAT+GGG + Chr8:3771771-3771790 MsG0880042106.01.T01:CDS 20.0%
!!! TACATTTTCTAAACACTAAA+AGG + Chr8:3771722-3771741 MsG0880042106.01.T01:CDS 20.0%
!!! TATATTAGTGAGTTTTTAGT+AGG - Chr8:3767323-3767342 None:intergenic 20.0%
!!! TGTATATATTGGTAATCAAA+CGG + Chr8:3767885-3767904 MsG0880042106.01.T01:intron 20.0%
!!! TTAAGTTGATCAATTTCATT+AGG + Chr8:3767240-3767259 MsG0880042106.01.T01:intron 20.0%
!!! TTATTGATTTTTCTAAAGAC+TGG + Chr8:3770887-3770906 MsG0880042106.01.T01:CDS 20.0%
!!! TTGTTTTCGATATTTTTTTC+AGG + Chr8:3765817-3765836 MsG0880042106.01.T01:intron 20.0%
! AAATCCTAATTTAAATGGCA+TGG + Chr8:3768498-3768517 MsG0880042106.01.T01:intron 25.0%
! AAGATATGTAAATCTTGAGT+TGG + Chr8:3770912-3770931 MsG0880042106.01.T01:CDS 25.0%
! AATATAGAAGATAGTACCTA+AGG - Chr8:3769960-3769979 None:intergenic 25.0%
! ACGTAATGTGAATTGAATTA+TGG + Chr8:3767504-3767523 MsG0880042106.01.T01:intron 25.0%
! ACTATTGAACGTTAAATTGT+TGG + Chr8:3769682-3769701 MsG0880042106.01.T01:intron 25.0%
! AGAAAAAGAATTTGTAGAGA+GGG + Chr8:3771963-3771982 MsG0880042106.01.T01:CDS 25.0%
! ATACTTGTATTATTAAAGCC+CGG + Chr8:3766376-3766395 MsG0880042106.01.T01:CDS 25.0%
! ATTGGAATATTAATCCCATT+TGG - Chr8:3768648-3768667 None:intergenic 25.0%
! CAAATAATATACTTAAGGTG+TGG - Chr8:3767714-3767733 None:intergenic 25.0%
! CACATCCAATAAAAAATTAG+AGG - Chr8:3766163-3766182 None:intergenic 25.0%
! CACTGTAATTTGAAAATACA+AGG + Chr8:3770461-3770480 MsG0880042106.01.T01:intron 25.0%
! CGTAATGTGAATTGAATTAT+GGG + Chr8:3767505-3767524 MsG0880042106.01.T01:intron 25.0%
! CTCATTGAAGATAAATAAGA+AGG - Chr8:3766793-3766812 None:intergenic 25.0%
! CTTGTCATTATCAATTCTTT+CGG + Chr8:3770852-3770871 MsG0880042106.01.T01:CDS 25.0%
! GATATAATTAACAGATGTCA+TGG - Chr8:3771028-3771047 None:intergenic 25.0%
! TACTAGTAGATTTACAGAAT+GGG + Chr8:3766632-3766651 MsG0880042106.01.T01:intron 25.0%
! TCAAGCTATGGTAAAATAAA+GGG + Chr8:3768199-3768218 MsG0880042106.01.T01:intron 25.0%
! TCTATAAAAAAGTTGAGTCA+TGG + Chr8:3767681-3767700 MsG0880042106.01.T01:intron 25.0%
! TTCAAGCTATGGTAAAATAA+AGG + Chr8:3768198-3768217 MsG0880042106.01.T01:intron 25.0%
! TTCATTAATCATTACCATTG+TGG - Chr8:3768307-3768326 None:intergenic 25.0%
!! ATGGTCAAATACTTTTGATA+AGG - Chr8:3767817-3767836 None:intergenic 25.0%
!! CTATGATTAAGGATATGTTT+TGG - Chr8:3767658-3767677 None:intergenic 25.0%
!! CTATGTTTTCTAAACACAAA+AGG + Chr8:3766678-3766697 MsG0880042106.01.T01:intron 25.0%
!! CTCTAAAAGGATAAACTATT+AGG - Chr8:3769409-3769428 None:intergenic 25.0%
!! CTTCTTATTTATCTTCAATG+AGG + Chr8:3766791-3766810 MsG0880042106.01.T01:intron 25.0%
!! CTTGTATTTTCAAATTACAG+TGG - Chr8:3770463-3770482 None:intergenic 25.0%
!! CTTTTCTATCATCTACAATA+TGG + Chr8:3766115-3766134 MsG0880042106.01.T01:intron 25.0%
!! GTAATCATCTCCAAATTTTA+TGG + Chr8:3771770-3771789 MsG0880042106.01.T01:CDS 25.0%
!! TAAAATAAAGGGATGGATTT+GGG + Chr8:3768210-3768229 MsG0880042106.01.T01:intron 25.0%
!! TAACCATCTCCAAATTTTAT+GGG + Chr8:3766726-3766745 MsG0880042106.01.T01:intron 25.0%
!! TTTTTCTCTAATGAACTCAA+TGG + Chr8:3768443-3768462 MsG0880042106.01.T01:intron 25.0%
!!! ACTTTTCATTTTAAGGCTAA+GGG + Chr8:3769215-3769234 MsG0880042106.01.T01:intron 25.0%
!!! ATGAACTTTCCTTTATTTTG+TGG + Chr8:3771144-3771163 MsG0880042106.01.T01:intron 25.0%
!!! CAAATGAAAAGTACTTGAAA+AGG + Chr8:3769726-3769745 MsG0880042106.01.T01:intron 25.0%
!!! GACAATTTTAATCTTCCTAA+AGG + Chr8:3765915-3765934 MsG0880042106.01.T01:CDS 25.0%
!!! GTTTTGTTATTCAAGATACT+TGG - Chr8:3768785-3768804 None:intergenic 25.0%
!!! TTTATTTTACCATAGCTTGA+AGG - Chr8:3768199-3768218 None:intergenic 25.0%
!!! TTTTCGATATTTTTTTCAGG+CGG + Chr8:3765820-3765839 MsG0880042106.01.T01:intron 25.0%
!!! TTTTTTTAACGCTGAAACAA+TGG - Chr8:3769243-3769262 None:intergenic 25.0%
AAATGTATTGCAACACCATA+TGG + Chr8:3766092-3766111 MsG0880042106.01.T01:intron 30.0%
ACATTGCCATAAAAAACAGT+TGG - Chr8:3769997-3770016 None:intergenic 30.0%
AGAGATATGCAAATGTGAAA+AGG + Chr8:3771875-3771894 MsG0880042106.01.T01:CDS 30.0%
AGTAAAAAAAACGTAGCATG+TGG + Chr8:3767469-3767488 MsG0880042106.01.T01:intron 30.0%
AGTCAAGAATTAATCCCATT+TGG - Chr8:3768753-3768772 None:intergenic 30.0%
CAAGTTCTTCCCATAAAATT+TGG - Chr8:3766738-3766757 None:intergenic 30.0%
CAGAAAAAGAATTTGTAGAG+AGG + Chr8:3771962-3771981 MsG0880042106.01.T01:CDS 30.0%
CAGATATGTAAATCTTGAGT+TGG + Chr8:3765944-3765963 MsG0880042106.01.T01:CDS 30.0%
CATGAATAAGCCATGATAAA+CGG + Chr8:3767297-3767316 MsG0880042106.01.T01:intron 30.0%
CCAATTGCAGATTCAAAATA+TGG - Chr8:3771838-3771857 None:intergenic 30.0%
GAAATTTCCTTGACAGAAAT+TGG - Chr8:3766480-3766499 None:intergenic 30.0%
GAATTGATTGAAGCAGAAAA+AGG + Chr8:3766904-3766923 MsG0880042106.01.T01:intron 30.0%
GATATGCGTATGTAGTAAAT+TGG - Chr8:3765771-3765790 None:intergenic 30.0%
GGATCATGTTGATACATTAA+AGG + Chr8:3770482-3770501 MsG0880042106.01.T01:intron 30.0%
GGATTGTTATGAATCCAAAA+GGG + Chr8:3765841-3765860 MsG0880042106.01.T01:CDS 30.0%
GTACTAGTAGATTTACAGAA+TGG + Chr8:3766631-3766650 MsG0880042106.01.T01:intron 30.0%
GTCAATGATTCATTTGATGA+TGG - Chr8:3767793-3767812 None:intergenic 30.0%
TAAATAAGAAGGCTTCAATC+AGG - Chr8:3766782-3766801 None:intergenic 30.0%
TAAATGGAAGCTAGAATTTG+AGG - Chr8:3767156-3767175 None:intergenic 30.0%
TAGAAAATCTCATCATCACA+TGG - Chr8:3767862-3767881 None:intergenic 30.0%
TAGATGATAGAAAAGCCATA+TGG - Chr8:3766110-3766129 None:intergenic 30.0%
TATATTGCCATTCTACACAA+AGG - Chr8:3770231-3770250 None:intergenic 30.0%
TCAATGCAAGTAATTATTGC+TGG + Chr8:3771278-3771297 MsG0880042106.01.T01:CDS 30.0%
! AAAATAAAGGGATGGATTTG+GGG + Chr8:3768211-3768230 MsG0880042106.01.T01:intron 30.0%
! AATTAATCCCATTTGGAATG+TGG - Chr8:3768746-3768765 None:intergenic 30.0%
! AGATACTACAAGACTTGTTT+CGG + Chr8:3767966-3767985 MsG0880042106.01.T01:intron 30.0%
! ATTAATCCCATTTGGAATGT+GGG - Chr8:3768745-3768764 None:intergenic 30.0%
! CATATGTTTTGCATTGCTAA+TGG + Chr8:3770043-3770062 MsG0880042106.01.T01:intron 30.0%
! GTAAAATAAAGGGATGGATT+TGG + Chr8:3768209-3768228 MsG0880042106.01.T01:intron 30.0%
! GTAACCATCTCCAAATTTTA+TGG + Chr8:3766725-3766744 MsG0880042106.01.T01:intron 30.0%
! TATGCCATGCCATTTAAATT+AGG - Chr8:3768505-3768524 None:intergenic 30.0%
! TGACAATTTAGTCGATTTCA+GGG + Chr8:3766515-3766534 MsG0880042106.01.T01:CDS 30.0%
! TTTTGCATTGCTAATGGTTA+TGG + Chr8:3770049-3770068 MsG0880042106.01.T01:intron 30.0%
!! ATACAAGTAGACGTTACTTT+TGG - Chr8:3768674-3768693 None:intergenic 30.0%
!! ATGAAAAGTACTTGAAAAGG+TGG + Chr8:3769729-3769748 MsG0880042106.01.T01:intron 30.0%
!! ATTATTTCTGTCAGTGAACA+CGG + Chr8:3771388-3771407 MsG0880042106.01.T01:CDS 30.0%
!! ATTGATAATGACAAGTAACC+TGG - Chr8:3765879-3765898 None:intergenic 30.0%
!! ATTTTAATCTTCCTAAAGGG+TGG + Chr8:3765919-3765938 MsG0880042106.01.T01:CDS 30.0%
!! ATTTTGTTTGCTCTGAACTT+TGG - Chr8:3767997-3768016 None:intergenic 30.0%
!! CCATATTTTGAATCTGCAAT+TGG + Chr8:3771835-3771854 MsG0880042106.01.T01:CDS 30.0%
!! TCATTTGATGATGGTGAAAT+GGG - Chr8:3767784-3767803 None:intergenic 30.0%
!! TTCATTTGATGATGGTGAAA+TGG - Chr8:3767785-3767804 None:intergenic 30.0%
!! TTGATAATGACAAGTAACCT+GGG - Chr8:3765878-3765897 None:intergenic 30.0%
!!! CAACTAAAATTTTGAAGCGT+GGG - Chr8:3767211-3767230 None:intergenic 30.0%
!!! CAGTTGGTTTTAATTTATCC+TGG + Chr8:3771806-3771825 MsG0880042106.01.T01:CDS 30.0%
!!! GACTTTTCATTTTAAGGCTA+AGG + Chr8:3769214-3769233 MsG0880042106.01.T01:intron 30.0%
!!! TGTTTTCGATGTTGTTTTTC+AGG + Chr8:3770785-3770804 MsG0880042106.01.T01:intron 30.0%
AAAATCTCATCATCACATGG+TGG - Chr8:3767859-3767878 None:intergenic 35.0%
AAATCTCATCATCACATGGT+GGG - Chr8:3767858-3767877 None:intergenic 35.0%
AATCGTCCATGTGAATTGAT+CGG - Chr8:3765664-3765683 None:intergenic 35.0%
AATTACTCCCACATTCCAAA+TGG + Chr8:3768735-3768754 MsG0880042106.01.T01:intron 35.0%
ACGACCGAATTCTTATTACT+AGG + Chr8:3769010-3769029 MsG0880042106.01.T01:intron 35.0%
ACTCAATGATGACACAAGAA+TGG - Chr8:3768591-3768610 None:intergenic 35.0%
AGAAAAAGGATTTGTGGAGA+GGG + Chr8:3766918-3766937 MsG0880042106.01.T01:intron 35.0%
AGAAGAAATGCTAAGTCAAG+AGG + Chr8:3768276-3768295 MsG0880042106.01.T01:intron 35.0%
AGAATTTGTAGAGAGGGATT+TGG + Chr8:3771969-3771988 MsG0880042106.01.T01:CDS 35.0%
AGAGAGAAGCAAATGTGAAA+AGG + Chr8:3766830-3766849 MsG0880042106.01.T01:intron 35.0%
AGCTTTCAAACTGATCCAAA+TGG + Chr8:3768630-3768649 MsG0880042106.01.T01:intron 35.0%
AGGAACAATTGATCCTAATG+GGG - Chr8:3768082-3768101 None:intergenic 35.0%
AGTACGTCTTAGAATCACAT+TGG - Chr8:3765698-3765717 None:intergenic 35.0%
ATCATGGCTTATTCATGCTA+GGG - Chr8:3767294-3767313 None:intergenic 35.0%
ATTACTCCCACATTCCAAAT+GGG + Chr8:3768736-3768755 MsG0880042106.01.T01:intron 35.0%
CACCCCTAGTAATAAGAATT+CGG - Chr8:3769017-3769036 None:intergenic 35.0%
CAGGAACAATTGATCCTAAT+GGG - Chr8:3768083-3768102 None:intergenic 35.0%
CCCTTGAAATCGACTAAATT+GGG - Chr8:3771496-3771515 None:intergenic 35.0%
CGACCGAATTCTTATTACTA+GGG + Chr8:3769011-3769030 MsG0880042106.01.T01:intron 35.0%
CGGATTGTTATGAATCCAAA+AGG + Chr8:3765840-3765859 MsG0880042106.01.T01:CDS 35.0%
CGTCTACTTGTATGAATTCA+TGG + Chr8:3768681-3768700 MsG0880042106.01.T01:intron 35.0%
CTTCCCATAAAATTTGGAGA+TGG - Chr8:3766732-3766751 None:intergenic 35.0%
GAAATTGAAGAGGAGATAGA+AGG - Chr8:3769886-3769905 None:intergenic 35.0%
GACCGAATTCTTATTACTAG+GGG + Chr8:3769012-3769031 MsG0880042106.01.T01:intron 35.0%
GAGATTTCCTTGACAGAAAT+TGG - Chr8:3771466-3771485 None:intergenic 35.0%
GCATTGCTAACAATTGCAAA+AGG + Chr8:3765987-3766006 MsG0880042106.01.T01:CDS 35.0%
GCTATGGTAAAATAAAGGGA+TGG + Chr8:3768203-3768222 MsG0880042106.01.T01:intron 35.0%
GCTTTCAAACTGATCCAAAT+GGG + Chr8:3768631-3768650 MsG0880042106.01.T01:intron 35.0%
GTACGTCTTAGAATCACATT+GGG - Chr8:3765697-3765716 None:intergenic 35.0%
TATCATGGCTTATTCATGCT+AGG - Chr8:3767295-3767314 None:intergenic 35.0%
TCAGAAAGTTTCTTCCTGAA+AGG + Chr8:3765717-3765736 MsG0880042106.01.T01:CDS 35.0%
TCAGGAACAATTGATCCTAA+TGG - Chr8:3768084-3768103 None:intergenic 35.0%
TCATAAACTCATTAAGCACG+TGG - Chr8:3768945-3768964 None:intergenic 35.0%
TGAAGCAGAAAAAGGATTTG+TGG + Chr8:3766912-3766931 MsG0880042106.01.T01:intron 35.0%
TGATCAAGAAGTTAGCAAGA+TGG + Chr8:3771426-3771445 MsG0880042106.01.T01:CDS 35.0%
TGCAACATCATATGAAGACT+TGG + Chr8:3771070-3771089 MsG0880042106.01.T01:intron 35.0%
TGTCGACAAGTTCATACATT+TGG + Chr8:3771303-3771322 MsG0880042106.01.T01:CDS 35.0%
TGTCGACAAGTTTGTACATT+TGG + Chr8:3766314-3766333 MsG0880042106.01.T01:CDS 35.0%
TGTCTCTTGAATGTGCAATT+TGG + Chr8:3770401-3770420 MsG0880042106.01.T01:intron 35.0%
TGTGTAGAATGGCAATATAG+AGG + Chr8:3770232-3770251 MsG0880042106.01.T01:intron 35.0%
TTCAAAATATGGCTTCAACC+AGG - Chr8:3771827-3771846 None:intergenic 35.0%
TTCTGTCAAGGAAATCTCTT+TGG + Chr8:3771468-3771487 MsG0880042106.01.T01:CDS 35.0%
TTGTTGAAGTTGAAGCTGTT+AGG + Chr8:3770549-3770568 MsG0880042106.01.T01:intron 35.0%
! AAAATTTGTTCCACTGCTAG+AGG + Chr8:3771534-3771553 MsG0880042106.01.T01:CDS 35.0%
! CAAGTCTTGTAGTATCTTCA+TGG - Chr8:3767963-3767982 None:intergenic 35.0%
! CCCAATTTAGTCGATTTCAA+GGG + Chr8:3771493-3771512 MsG0880042106.01.T01:CDS 35.0%
! CTAGCAGTGGAACAAATTTT+TGG - Chr8:3771534-3771553 None:intergenic 35.0%
! GACAATTTAGTCGATTTCAG+GGG + Chr8:3766516-3766535 MsG0880042106.01.T01:CDS 35.0%
! GGTCGTGTTAAATCTTTTGA+AGG - Chr8:3768996-3769015 None:intergenic 35.0%
! GTGACAATTTAGTCGATTTC+AGG + Chr8:3766514-3766533 MsG0880042106.01.T01:CDS 35.0%
! TTGAAAAGGTGGTAGACTTT+TGG + Chr8:3769740-3769759 MsG0880042106.01.T01:intron 35.0%
! TTTTAGTAGGCCGTTTATCA+TGG - Chr8:3767310-3767329 None:intergenic 35.0%
! TTTTCACATTTGCTTCTCTC+TGG - Chr8:3766831-3766850 None:intergenic 35.0%
!! AGAATGGTGGTGTTTTCAAT+CGG - Chr8:3768575-3768594 None:intergenic 35.0%
!! ATTATTTCTGTAAGGGAGCA+AGG + Chr8:3766399-3766418 MsG0880042106.01.T01:CDS 35.0%
!! CCACGCTTCAAAATTTTAGT+TGG + Chr8:3767209-3767228 MsG0880042106.01.T01:intron 35.0%
!! TTATTTCTGTAAGGGAGCAA+GGG + Chr8:3766400-3766419 MsG0880042106.01.T01:CDS 35.0%
!! TTATTTCTGTCAGTGAACAC+GGG + Chr8:3771389-3771408 MsG0880042106.01.T01:CDS 35.0%
!! TTTGATGTTGATTCCCCATT+AGG + Chr8:3768066-3768085 MsG0880042106.01.T01:intron 35.0%
!!! AGACGTTACTTTTGGCTTAT+TGG - Chr8:3768666-3768685 None:intergenic 35.0%
!!! CCAACTAAAATTTTGAAGCG+TGG - Chr8:3767212-3767231 None:intergenic 35.0%
!!! TCAGACAGTTTTTTCATGAG+TGG + Chr8:3770673-3770692 MsG0880042106.01.T01:CDS 35.0%
!!! TTTCGATGTTGTTTTTCAGG+CGG + Chr8:3770788-3770807 MsG0880042106.01.T01:intron 35.0%
AAGGATGCGGTATGGTTAAA+TGG - Chr8:3768180-3768199 None:intergenic 40.0%
ACCTTTGACAATTGTGAGCA+AGG - Chr8:3770959-3770978 None:intergenic 40.0%
AGATGGAGAATATATCCCCA+TGG + Chr8:3770578-3770597 MsG0880042106.01.T01:CDS 40.0%
AGCACAACCAATTTCTGTCA+AGG + Chr8:3766470-3766489 MsG0880042106.01.T01:CDS 40.0%
AGGGATTTGGATGCTAAACT+AGG + Chr8:3766937-3766956 MsG0880042106.01.T01:intron 40.0%
ATACCCGTAGGTTTACAGAA+TGG + Chr8:3771674-3771693 MsG0880042106.01.T01:CDS 40.0%
ATCCATTCCTTCCACTCTAA+AGG + Chr8:3769827-3769846 MsG0880042106.01.T01:intron 40.0%
ATGCAAATGTGAAAAGGCTG+AGG + Chr8:3771881-3771900 MsG0880042106.01.T01:CDS 40.0%
ATGCCCATTCTGTAAACCTA+CGG - Chr8:3771681-3771700 None:intergenic 40.0%
ATGGGTCTCACGATGAAATA+AGG - Chr8:3769617-3769636 None:intergenic 40.0%
ATTTACTCAAGCACCAACCA+TGG - Chr8:3765747-3765766 None:intergenic 40.0%
CAATGATGACACAAGAATGG+TGG - Chr8:3768588-3768607 None:intergenic 40.0%
CAATTGAGAAGAAATCCCCA+GGG + Chr8:3765634-3765653 MsG0880042106.01.T01:CDS 40.0%
CACGCTCAACCACAAAATAA+AGG - Chr8:3771156-3771175 None:intergenic 40.0%
CACGTGAATCATCACTTCAA+AGG + Chr8:3768839-3768858 MsG0880042106.01.T01:intron 40.0%
CAGAAAAAGGATTTGTGGAG+AGG + Chr8:3766917-3766936 MsG0880042106.01.T01:intron 40.0%
CGATCAAGAAGTTAGTGAGA+TGG + Chr8:3766437-3766456 MsG0880042106.01.T01:CDS 40.0%
CGTATGTGTATGTAGTAAGC+TGG - Chr8:3770727-3770746 None:intergenic 40.0%
CTCCCTTACAGAAATAATCC+GGG - Chr8:3766397-3766416 None:intergenic 40.0%
GAACATACTTCCTCAAGCAA+GGG - Chr8:3766570-3766589 None:intergenic 40.0%
GAAGATAGTACCTAAGGCTA+TGG - Chr8:3769954-3769973 None:intergenic 40.0%
GAATGGGCATTAACAGCATT+AGG + Chr8:3771691-3771710 MsG0880042106.01.T01:CDS 40.0%
GAGACATATAGTGTCGTGTT+CGG - Chr8:3771237-3771256 None:intergenic 40.0%
GATTCAGCCTTTGTGTAGAA+TGG + Chr8:3770221-3770240 MsG0880042106.01.T01:intron 40.0%
GCCCTTGAAATCGACTAAAT+TGG - Chr8:3771497-3771516 None:intergenic 40.0%
GCTCCCTTACAGAAATAATC+CGG - Chr8:3766398-3766417 None:intergenic 40.0%
GTCTCTATCAGAAACTGAAC+AGG + Chr8:3766263-3766282 MsG0880042106.01.T01:intron 40.0%
TAACTTTGTTCCACTGCAAG+AGG + Chr8:3771600-3771619 MsG0880042106.01.T01:CDS 40.0%
TACCCGTAGGTTTACAGAAT+GGG + Chr8:3771675-3771694 MsG0880042106.01.T01:CDS 40.0%
TCCATTCCTTCCACTCTAAA+GGG + Chr8:3769828-3769847 MsG0880042106.01.T01:intron 40.0%
TCTCTGCTTGTCAATGAGTT+TGG + Chr8:3767928-3767947 MsG0880042106.01.T01:intron 40.0%
TGAACATACTTCCTCAAGCA+AGG - Chr8:3766571-3766590 None:intergenic 40.0%
TGCAAAGGAGTAAGAGAGTA+TGG + Chr8:3768025-3768044 MsG0880042106.01.T01:intron 40.0%
TGGGTCTCACGATGAAATAA+GGG - Chr8:3769616-3769635 None:intergenic 40.0%
TGTAGTAAGCTGGAATTCAC+TGG - Chr8:3770717-3770736 None:intergenic 40.0%
TTACCATAGCTTGAAGGATG+CGG - Chr8:3768193-3768212 None:intergenic 40.0%
TTCACAATAAACGCCTTCCA+CGG - Chr8:3771343-3771362 None:intergenic 40.0%
TTGACAGAAATTGGTTGTGC+TGG - Chr8:3766471-3766490 None:intergenic 40.0%
TTGGATGCTAAACTAGGCTA+TGG + Chr8:3771988-3772007 MsG0880042106.01.T01:CDS 40.0%
TTTGGGGATTAGGGATGATA+AGG + Chr8:3768227-3768246 MsG0880042106.01.T01:intron 40.0%
! AAAACTTGTTCCCTTGCTTG+AGG + Chr8:3766557-3766576 MsG0880042106.01.T01:CDS 40.0%
! GCCCAATTTAGTCGATTTCA+AGG + Chr8:3771492-3771511 MsG0880042106.01.T01:CDS 40.0%
! TCAAGAGATACCCTTTAGAG+TGG - Chr8:3769841-3769860 None:intergenic 40.0%
! TGCTTGAGGAAGTATGTTCA+TGG + Chr8:3766571-3766590 MsG0880042106.01.T01:intron 40.0%
! TTAGTCGATTTCAAGGGCTT+AGG + Chr8:3771499-3771518 MsG0880042106.01.T01:CDS 40.0%
! TTAGTCGATTTCAGGGGTAT+AGG + Chr8:3766522-3766541 MsG0880042106.01.T01:CDS 40.0%
! TTTTCATGAGTGGCTATCCA+TGG + Chr8:3770683-3770702 MsG0880042106.01.T01:CDS 40.0%
!! AAGCCCGGATTATTTCTGTA+AGG + Chr8:3766391-3766410 MsG0880042106.01.T01:CDS 40.0%
!! AGCCCGGATTATTTCTGTAA+GGG + Chr8:3766392-3766411 MsG0880042106.01.T01:CDS 40.0%
AAAGGGAACGAGAACAACTC+TGG + Chr8:3770826-3770845 MsG0880042106.01.T01:CDS 45.0%
AATTGCTCAATCGTCGTCCA+TGG - Chr8:3770607-3770626 None:intergenic 45.0%
ACATATCTGCTCCACCCTTT+AGG - Chr8:3765933-3765952 None:intergenic 45.0%
AGCGCAACCAATTTCTGTCA+AGG + Chr8:3771456-3771475 MsG0880042106.01.T01:CDS 45.0%
AGGATTTGTGGAGAGGGATT+TGG + Chr8:3766924-3766943 MsG0880042106.01.T01:intron 45.0%
ATACCGCATCCTTCAAGCTA+TGG + Chr8:3768187-3768206 MsG0880042106.01.T01:intron 45.0%
ATAGCTTGAAGGATGCGGTA+TGG - Chr8:3768188-3768207 None:intergenic 45.0%
ATTCACGTGTAGTGTGCATG+TGG - Chr8:3768828-3768847 None:intergenic 45.0%
ATTGCTCAATCGTCGTCCAT+GGG - Chr8:3770606-3770625 None:intergenic 45.0%
CAACCATATGCGTTAGACCT+CGG + Chr8:3767095-3767114 MsG0880042106.01.T01:intron 45.0%
CCACTATTGTTGACAACCAG+AGG + Chr8:3771641-3771660 MsG0880042106.01.T01:CDS 45.0%
CCTACTTTGCCTAAGAGTGA+GGG - Chr8:3771577-3771596 None:intergenic 45.0%
CCTCTGGTTGTCAACAATAG+TGG - Chr8:3771644-3771663 None:intergenic 45.0%
CGAAGAATTGCCATAGCCTT+AGG + Chr8:3769941-3769960 MsG0880042106.01.T01:intron 45.0%
CGACGATTGAGCAATTCACA+TGG + Chr8:3770611-3770630 MsG0880042106.01.T01:CDS 45.0%
GAATGGGCATTCACAGCATT+AGG + Chr8:3766648-3766667 MsG0880042106.01.T01:intron 45.0%
GACAATTGTGAGCAAGGCAT+TGG - Chr8:3770953-3770972 None:intergenic 45.0%
GCAATTGAGAAGAAATCCCC+AGG + Chr8:3765633-3765652 MsG0880042106.01.T01:CDS 45.0%
GCCTTGCTCACAATTGTCAA+AGG + Chr8:3770955-3770974 MsG0880042106.01.T01:CDS 45.0%
GTCTGGTTGTCAACAAGTGA+TGG - Chr8:3766600-3766619 None:intergenic 45.0%
TAGTACGCTTTCTCTTCGTC+TGG - Chr8:3766617-3766636 None:intergenic 45.0%
TCACAATAAACGCCTTCCAC+GGG - Chr8:3771342-3771361 None:intergenic 45.0%
TCTTCCTGAAAGGCTATCCA+TGG + Chr8:3765727-3765746 MsG0880042106.01.T01:CDS 45.0%
TGCCCATTCTGTAAACCTAC+GGG - Chr8:3771680-3771699 None:intergenic 45.0%
TGGGAAGAACTTGAGACAGT+TGG + Chr8:3766745-3766764 MsG0880042106.01.T01:intron 45.0%
TTCACGTGTAGTGTGCATGT+GGG - Chr8:3768827-3768846 None:intergenic 45.0%
TTGACAGAAATTGGTTGCGC+TGG - Chr8:3771457-3771476 None:intergenic 45.0%
! AAGGGATGGATTTGGGGATT+AGG + Chr8:3768217-3768236 MsG0880042106.01.T01:intron 45.0%
! AGGGATGGATTTGGGGATTA+GGG + Chr8:3768218-3768237 MsG0880042106.01.T01:intron 45.0%
! GAGTTGTTCTCGTTCCCTTT+TGG - Chr8:3770826-3770845 None:intergenic 45.0%
! TGCAAGAGGAAGCATGTTCA+TGG + Chr8:3771614-3771633 MsG0880042106.01.T01:CDS 45.0%
! TGCTAGAGGAAGCATGTTCA+TGG + Chr8:3771548-3771567 MsG0880042106.01.T01:CDS 45.0%
!! ACCCTTTAGAGTGGAAGGAA+TGG - Chr8:3769832-3769851 None:intergenic 45.0%
!! GAGATACCCTTTAGAGTGGA+AGG - Chr8:3769837-3769856 None:intergenic 45.0%
!! AAAATAAAATAAAAAATTGT+TGG + Chr8:3770335-3770354 MsG0880042106.01.T01:intron 5.0%
!! TATTAAATAAAAACATTTAT+AGG - Chr8:3769539-3769558 None:intergenic 5.0%
!! TTAAAAACAATTTATATAAA+GGG - Chr8:3771214-3771233 None:intergenic 5.0%
AAAGGGAGCAAGAACAACCC+AGG + Chr8:3765858-3765877 MsG0880042106.01.T01:CDS 50.0%
AAGCTGTTAGGCTGCTGAGA+TGG + Chr8:3770561-3770580 MsG0880042106.01.T01:intron 50.0%
AAGGCTGAGGAAGACTGTAG+AGG + Chr8:3771894-3771913 MsG0880042106.01.T01:CDS 50.0%
ATATATCCCCATGGTCCCCA+TGG + Chr8:3770587-3770606 MsG0880042106.01.T01:CDS 50.0%
ATGAGCAACAATGACCACCG+AGG - Chr8:3767115-3767134 None:intergenic 50.0%
CACTTCGCAACTCTTGGAGT+GGG + Chr8:3766340-3766359 MsG0880042106.01.T01:CDS 50.0%
CATGAGTGGCTATCCATGGT+TGG + Chr8:3770687-3770706 MsG0880042106.01.T01:intron 50.0%
CCAACCATGGATAGCCTTTC+AGG - Chr8:3765734-3765753 None:intergenic 50.0%
CCCTCACTCTTAGGCAAAGT+AGG + Chr8:3771574-3771593 MsG0880042106.01.T01:CDS 50.0%
CCTGAAAGGCTATCCATGGT+TGG + Chr8:3765731-3765750 MsG0880042106.01.T01:intron 50.0%
GAACATGCTTCCTCTAGCAG+TGG - Chr8:3771547-3771566 None:intergenic 50.0%
GAACATGCTTCCTCTTGCAG+TGG - Chr8:3771613-3771632 None:intergenic 50.0%
GCCTACTTTGCCTAAGAGTG+AGG - Chr8:3771578-3771597 None:intergenic 50.0%
GGACGACCGATCAATTCACA+TGG + Chr8:3765655-3765674 MsG0880042106.01.T01:CDS 50.0%
GGGTATGCTTTCTCTTCCTC+TGG - Chr8:3771660-3771679 None:intergenic 50.0%
GTCAAGAGGAATCGCCACAA+TGG + Chr8:3768290-3768309 MsG0880042106.01.T01:intron 50.0%
TCATGGCATCCCTCACTCTT+AGG + Chr8:3771565-3771584 MsG0880042106.01.T01:CDS 50.0%
TCTGTAAGGGAGCAAGGGTA+TGG + Chr8:3766405-3766424 MsG0880042106.01.T01:CDS 50.0%
TGAATTGATCGGTCGTCCCT+GGG - Chr8:3765653-3765672 None:intergenic 50.0%
TGGATGCACTTCGCAACTCT+TGG + Chr8:3766334-3766353 MsG0880042106.01.T01:CDS 50.0%
TTGCTCAATCGTCGTCCATG+GGG - Chr8:3770605-3770624 None:intergenic 50.0%
! ACCACTACTGCGATTTTGCC+TGG + Chr8:3770118-3770137 MsG0880042106.01.T01:intron 50.0%
! ATTCACTGGAGCACCAACCA+TGG - Chr8:3770703-3770722 None:intergenic 50.0%
! GGAAGAGAAAGCATACCCGT+AGG + Chr8:3771662-3771681 MsG0880042106.01.T01:CDS 50.0%
! GGGTTGTTCTTGCTCCCTTT+TGG - Chr8:3765858-3765877 None:intergenic 50.0%
CCACCGAGGTCTAACGCATA+TGG - Chr8:3767101-3767120 None:intergenic 55.0%
CCATATGCGTTAGACCTCGG+TGG + Chr8:3767098-3767117 MsG0880042106.01.T01:intron 55.0%
GAATTGATCGGTCGTCCCTG+GGG - Chr8:3765652-3765671 None:intergenic 55.0%
GCACTTCGCAACTCTTGGAG+TGG + Chr8:3766339-3766358 MsG0880042106.01.T01:CDS 55.0%
GCATGCATCAACCTCTTGCC+AGG - Chr8:3770139-3770158 None:intergenic 55.0%
GCCAGGCAAAATCGCAGTAG+TGG - Chr8:3770122-3770141 None:intergenic 55.0%
GTGAATTGATCGGTCGTCCC+TGG - Chr8:3765654-3765673 None:intergenic 55.0%
TGAACTCCACAACCCGTGGA+AGG + Chr8:3771327-3771346 MsG0880042106.01.T01:CDS 55.0%
TGGATGAACTCCACAACCCG+TGG + Chr8:3771323-3771342 MsG0880042106.01.T01:CDS 55.0%
! CTGCGATTTTGCCTGGCAAG+AGG + Chr8:3770125-3770144 MsG0880042106.01.T01:intron 55.0%
! TAAACGCCTTCCACGGGTTG+TGG - Chr8:3771336-3771355 None:intergenic 55.0%
ATCGTCGTCCATGGGGACCA+TGG - Chr8:3770598-3770617 None:intergenic 60.0%
TCGTCGTCCATGGGGACCAT+GGG - Chr8:3770597-3770616 None:intergenic 60.0%
CGTCGTCCATGGGGACCATG+GGG - Chr8:3770596-3770615 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 3765606 3772020 3765606 ID=MsG0880042106.01;Name=MsG0880042106.01
Chr8 mRNA 3765606 3772020 3765606 ID=MsG0880042106.01.T01;Parent=MsG0880042106.01;Name=MsG0880042106.01.T01;_AED=0.33;_eAED=0.34;_QI=0|0|0|1|1|1|6|0|560
Chr8 exon 3765606 3765748 3765606 ID=MsG0880042106.01.T01:exon:1610;Parent=MsG0880042106.01.T01
Chr8 exon 3765839 3766008 3765839 ID=MsG0880042106.01.T01:exon:1611;Parent=MsG0880042106.01.T01
Chr8 exon 3766274 3766581 3766274 ID=MsG0880042106.01.T01:exon:1612;Parent=MsG0880042106.01.T01
Chr8 exon 3770571 3770704 3770571 ID=MsG0880042106.01.T01:exon:1613;Parent=MsG0880042106.01.T01
Chr8 exon 3770807 3770976 3770807 ID=MsG0880042106.01.T01:exon:1614;Parent=MsG0880042106.01.T01
Chr8 exon 3771263 3772020 3771263 ID=MsG0880042106.01.T01:exon:1615;Parent=MsG0880042106.01.T01
Chr8 CDS 3765606 3765748 3765606 ID=MsG0880042106.01.T01:cds;Parent=MsG0880042106.01.T01
Chr8 CDS 3765839 3766008 3765839 ID=MsG0880042106.01.T01:cds;Parent=MsG0880042106.01.T01
Chr8 CDS 3766274 3766581 3766274 ID=MsG0880042106.01.T01:cds;Parent=MsG0880042106.01.T01
Chr8 CDS 3770571 3770704 3770571 ID=MsG0880042106.01.T01:cds;Parent=MsG0880042106.01.T01
Chr8 CDS 3770807 3770976 3770807 ID=MsG0880042106.01.T01:cds;Parent=MsG0880042106.01.T01
Chr8 CDS 3771263 3772020 3771263 ID=MsG0880042106.01.T01:cds;Parent=MsG0880042106.01.T01
Gene Sequence

>MsG0880042106.01.T01

ATGGAGAATCATCACTCAAACAGTAAAGCAATTGAGAAGAAATCCCCAGGGACGACCGATCAATTCACATGGACGATTAAGAACTTCTCCCAATGTGATTCTAAGACGTACTCAGAAAGTTTCTTCCTGAAAGGCTATCCATGGCGGATTGTTATGAATCCAAAAGGGAGCAAGAACAACCCAGGTTACTTGTCATTATCAATTTATTTGAATGTTGGCGACAATTTTAATCTTCCTAAAGGGTGGAGCAGATATGTAAATCTTGAGTTGGCTCTTGCTAATCAAGTCAATGCATTGCTAACAATTGCAAAAGAAACTGAACAAGAGTTCAAAGAAAGTAGTTATTATTGGAGTGTCGACAAGTTTGTACATTTGGATGCACTTCGCAACTCTTGGAGTGGGTATGTTTTGAATGATACTTGTATTATTAAAGCCCGGATTATTTCTGTAAGGGAGCAAGGGTATGGAAGCGTAAACGATCAAGAAGTTAGTGAGATGGATAGTTCACCAGCACAACCAATTTCTGTCAAGGAAATTTCTTTAGCATCGTCATGTGACAATTTAGTCGATTTCAGGGGTATAGGCAAAGTAGACAAAAAACTTGTTCCCTTGCTTGAGGAAGCTGCTGAGATGGAGAATATATCCCCATGGTCCCCATGGACGACGATTGAGCAATTCACATGGACGATTAAGAACTTCTCTAAATGTGATTCTCAGATGTACTCAGACAGTTTTTTCATGAGTGGCTATCCATGGCGGATTGTTATGAATCCAAAAGGGAACGAGAACAACTCTGGTTACTTGTCATTATCAATTCTTTCGGTTGTTGCTGATATTATTGATTTTTCTAAAGACTGGAAAAGATATGTAAATCTTGAGTTGGATCTTACTAATCAAGCCAATGCCTTGCTCACAATTGTCAAAGAAACTGAACAGGAGTTCAATGCAAGTAATTATTGCTGGAGTGTCGACAAGTTCATACATTTGGATGAACTCCACAACCCGTGGAAGGCGTTTATTGTGAATAATACTTGTATTATTAAAGCTCGGATTATTTCTGTCAGTGAACACGGGTATGAAAGACTAATTGATCAAGAAGTTAGCAAGATGGATTCACCAGCGCAACCAATTTCTGTCAAGGAAATCTCTTTGGTGCCCAATTTAGTCGATTTCAAGGGCTTAGGCAAAGTAGACCAAAAATTTGTTCCACTGCTAGAGGAAGCATGTTCATGGCATCCCTCACTCTTAGGCAAAGTAGGCACTAACTTTGTTCCACTGCAAGAGGAAGCATGTTCATGGCATGCCACTATTGTTGACAACCAGAGGAAGAGAAAGCATACCCGTAGGTTTACAGAATGGGCATTAACAGCATTAGGTCGAGTTCTACATTTTCTAAACACTAAAAGGGTGAAAGATATGAATGAAGAAGCTTGTAATCATCTCCAAATTTTATGGGAAGAACTTGAGACAGTTGGTTTTAATTTATCCTGGTTGAAGCCATATTTTGAATCTGCAATTGGTAAGAAAAGTTATGCTCAGAGATATGCAAATGTGAAAAGGCTGAGGAAGACTGTAGAGGCTCTAGAGAGTGATCATGCTAAAGTAAGAGAAGAATTGATTGAAGCAGAAAAAGAATTTGTAGAGAGGGATTTGGATGCTAAACTAGGCTATGGAGCAGCCTAG
Protein sequence

>MsG0880042106.01.T01

MENHHSNSKAIEKKSPGTTDQFTWTIKNFSQCDSKTYSESFFLKGYPWRIVMNPKGSKNNPGYLSLSIYLNVGDNFNLPKGWSRYVNLELALANQVNALLTIAKETEQEFKESSYYWSVDKFVHLDALRNSWSGYVLNDTCIIKARIISVREQGYGSVNDQEVSEMDSSPAQPISVKEISLASSCDNLVDFRGIGKVDKKLVPLLEEAAEMENISPWSPWTTIEQFTWTIKNFSKCDSQMYSDSFFMSGYPWRIVMNPKGNENNSGYLSLSILSVVADIIDFSKDWKRYVNLELDLTNQANALLTIVKETEQEFNASNYCWSVDKFIHLDELHNPWKAFIVNNTCIIKARIISVSEHGYERLIDQEVSKMDSPAQPISVKEISLVPNLVDFKGLGKVDQKFVPLLEEACSWHPSLLGKVGTNFVPLQEEACSWHATIVDNQRKRKHTRRFTEWALTALGRVLHFLNTKRVKDMNEEACNHLQILWEELETVGFNLSWLKPYFESAIGKKSYAQRYANVKRLRKTVEALESDHAKVREELIEAEKEFVERDLDAKLGYGAA*