AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000161.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000161.01.T01 MTR_1g022160 91.239 468 14 1 64 504 19 486 0.0 832
MsG0180000161.01.T01 MTR_1g022160 91.630 454 11 1 64 490 19 472 0.0 806
MsG0180000161.01.T01 MTR_1g022160 91.982 449 9 1 64 485 19 467 0.0 801
MsG0180000161.01.T01 MTR_1g022160 84.153 366 25 3 64 402 19 378 0.0 592
MsG0180000161.01.T01 MTR_3g116510 59.170 458 136 6 63 493 22 455 0.0 530
MsG0180000161.01.T01 MTR_4g069940 58.952 458 139 7 63 492 23 459 0.0 529
MsG0180000161.01.T01 MTR_3g116510 54.651 344 105 6 176 492 1 320 6.11e-124 365
MsG0180000161.01.T01 MTR_7g026340 37.333 450 228 8 69 490 23 446 1.18e-104 320
MsG0180000161.01.T01 MTR_4g083500 39.434 459 226 12 69 492 44 485 3.01e-99 309
MsG0180000161.01.T01 MTR_6g088885 34.583 480 254 9 45 495 9 457 8.83e-91 286
MsG0180000161.01.T01 MTR_1g056640 34.979 466 256 10 69 496 38 494 2.89e-86 274
MsG0180000161.01.T01 MTR_1g007810 43.125 320 147 6 69 359 16 329 2.70e-80 254
MsG0180000161.01.T01 MTR_5g085580 33.406 461 259 9 69 496 25 470 6.75e-80 257
MsG0180000161.01.T01 MTR_1g077990 42.547 322 155 5 69 363 31 349 1.01e-79 254
MsG0180000161.01.T01 MTR_3g065460 32.613 463 248 7 61 492 16 445 1.27e-75 246
MsG0180000161.01.T01 MTR_4g084480 39.316 351 183 5 69 391 32 380 1.43e-75 243
MsG0180000161.01.T01 MTR_4g052970 39.053 338 177 4 69 379 29 364 9.59e-75 241
MsG0180000161.01.T01 MTR_4g084480 40.000 335 171 5 69 375 32 364 1.31e-74 241
MsG0180000161.01.T01 MTR_4g084480 40.683 322 162 4 69 363 25 344 1.74e-74 240
MsG0180000161.01.T01 MTR_5g078200 33.836 464 243 7 60 492 14 444 7.22e-74 246
MsG0180000161.01.T01 MTR_2g086530 38.710 341 171 6 59 365 12 348 1.66e-73 238
MsG0180000161.01.T01 MTR_2g086530 39.506 324 165 5 69 365 8 327 2.79e-73 236
MsG0180000161.01.T01 MTR_4g088155 31.692 467 262 11 60 492 14 457 4.06e-73 239
MsG0180000161.01.T01 MTR_4g010200 37.690 329 177 3 70 371 34 361 2.50e-72 235
MsG0180000161.01.T01 MTR_1g031900 32.403 466 253 6 61 496 16 449 9.64e-72 237
MsG0180000161.01.T01 MTR_8g102340 32.379 454 218 9 65 490 24 416 1.10e-71 236
MsG0180000161.01.T01 MTR_1g031900 32.613 463 250 6 61 493 16 446 1.18e-71 236
MsG0180000161.01.T01 MTR_8g012400 33.407 455 245 11 70 492 30 458 3.48e-71 234
MsG0180000161.01.T01 MTR_4g132280 33.115 459 245 7 64 492 40 466 3.58e-71 236
MsG0180000161.01.T01 MTR_3g083580 32.563 476 253 11 46 490 6 444 9.07e-71 234
MsG0180000161.01.T01 MTR_5g078200 33.559 444 231 7 80 492 1 411 2.57e-68 230
MsG0180000161.01.T01 MTR_7g053500 32.166 457 251 11 70 492 27 458 2.72e-68 226
MsG0180000161.01.T01 MTR_2g019345 39.441 322 163 6 69 362 24 341 8.08e-67 221
MsG0180000161.01.T01 MTR_8g085720 30.962 478 264 8 46 492 6 448 1.55e-65 220
MsG0180000161.01.T01 MTR_3g080410 37.463 339 176 7 69 374 26 361 1.12e-62 209
MsG0180000161.01.T01 MTR_4g114850 35.312 320 179 3 70 362 27 345 3.14e-62 208
MsG0180000161.01.T01 MTR_4g114850 35.312 320 179 3 70 362 27 345 4.57e-62 207
MsG0180000161.01.T01 MTR_4g114850 35.312 320 179 3 70 362 27 345 6.02e-62 207
MsG0180000161.01.T01 MTR_4g076500 37.785 307 160 5 69 351 78 377 3.46e-58 198
MsG0180000161.01.T01 MTR_8g012400 32.668 401 212 11 124 492 4 378 2.67e-55 190
MsG0180000161.01.T01 MTR_7g053500 32.010 403 215 11 124 492 4 381 5.73e-55 189
MsG0180000161.01.T01 MTR_7g081350 35.556 315 170 7 69 358 27 333 2.42e-51 178
MsG0180000161.01.T01 MTR_1g052430 35.556 315 172 7 69 358 32 340 8.91e-50 176
MsG0180000161.01.T01 MTR_4g076490 33.856 319 176 8 69 363 97 404 1.04e-48 173
MsG0180000161.01.T01 MTR_4g076470 34.395 314 170 9 69 358 23 324 8.04e-48 168
MsG0180000161.01.T01 MTR_4g076440 33.758 314 172 8 69 358 23 324 2.07e-47 167
MsG0180000161.01.T01 MTR_4g076570 35.016 317 177 6 69 361 22 333 2.34e-47 168
MsG0180000161.01.T01 MTR_2g034480 31.988 347 207 9 45 367 3 344 4.27e-46 165
MsG0180000161.01.T01 MTR_4g076430 34.076 314 171 9 69 358 23 324 4.58e-46 164
MsG0180000161.01.T01 MTR_4g076255 33.439 314 173 8 69 358 25 326 3.42e-44 159
MsG0180000161.01.T01 MTR_3g095050 28.078 463 265 21 63 492 28 455 7.68e-43 159
MsG0180000161.01.T01 MTR_4g112025 28.261 460 260 17 69 492 31 456 2.34e-42 158
MsG0180000161.01.T01 MTR_2g034470 31.765 340 198 10 69 381 30 362 3.90e-42 154
MsG0180000161.01.T01 MTR_2g034440 32.362 309 176 9 69 351 22 323 6.90e-42 152
MsG0180000161.01.T01 MTR_4g124440 27.479 484 274 19 51 492 3 451 7.43e-42 156
MsG0180000161.01.T01 MTR_7g081370 32.787 305 179 7 69 358 28 321 3.29e-41 150
MsG0180000161.01.T01 MTR_1g053320 27.564 468 274 16 59 492 20 456 3.12e-40 152
MsG0180000161.01.T01 MTR_2g034470 31.231 333 195 10 76 381 2 327 1.88e-39 146
MsG0180000161.01.T01 MTR_8g092070 25.546 458 277 15 67 492 32 457 2.87e-39 150
MsG0180000161.01.T01 MTR_2g027560 27.922 462 264 17 65 492 24 450 3.90e-39 149
MsG0180000161.01.T01 MTR_1g010120 27.790 457 263 16 69 492 26 448 2.77e-38 146
MsG0180000161.01.T01 MTR_7g085390 26.362 459 269 16 69 492 26 450 1.03e-36 142
MsG0180000161.01.T01 MTR_3g108600 27.253 466 254 17 59 492 23 435 5.90e-36 139
MsG0180000161.01.T01 MTR_6g032820 25.843 445 258 17 69 475 26 436 3.50e-31 125
MsG0180000161.01.T01 MTR_5g081720 31.987 297 170 7 90 359 58 349 1.03e-30 123
MsG0180000161.01.T01 MTR_3g031770 26.269 453 271 15 69 492 27 445 8.67e-30 122
MsG0180000161.01.T01 MTR_8g085440 48.810 84 43 0 409 492 32 115 1.48e-21 90.5
MsG0180000161.01.T01 MTR_8g089400 44.211 95 52 1 397 490 25 119 1.74e-21 91.7
MsG0180000161.01.T01 MTR_4g134280 25.946 370 208 14 155 492 1 336 2.53e-21 95.9
MsG0180000161.01.T01 MTR_8g089400 44.211 95 52 1 397 490 45 139 4.34e-21 90.9
MsG0180000161.01.T01 MTR_3g048280 40.476 126 65 5 370 489 71 192 5.71e-21 91.7
MsG0180000161.01.T01 MTR_8g085420 50.000 78 39 0 409 486 32 109 2.40e-20 87.8
MsG0180000161.01.T01 MTR_5g091650 41.322 121 52 4 391 495 77 194 2.66e-20 89.4
MsG0180000161.01.T01 MTR_5g091650 41.322 121 52 4 391 495 77 194 8.81e-20 89.7
MsG0180000161.01.T01 MTR_8g085390 46.988 83 44 0 408 490 29 111 2.55e-19 86.3
MsG0180000161.01.T01 MTR_3g082080 46.914 81 43 0 409 489 157 237 5.71e-19 86.7
MsG0180000161.01.T01 MTR_2g049670 44.086 93 51 1 409 501 158 249 1.07e-18 87.4
MsG0180000161.01.T01 MTR_1g084820 50.633 79 38 1 408 486 419 496 2.84e-18 88.2
MsG0180000161.01.T01 MTR_4g109490 43.617 94 52 1 399 492 14 106 3.06e-18 84.0
MsG0180000161.01.T01 MTR_1g084820 50.633 79 38 1 408 486 419 496 3.18e-18 88.2
MsG0180000161.01.T01 MTR_7g111600 49.425 87 38 3 409 492 160 243 5.23e-18 84.3
MsG0180000161.01.T01 MTR_7g111600 41.259 143 58 7 372 492 105 243 7.21e-18 84.7
MsG0180000161.01.T01 MTR_7g111600 41.259 143 58 7 372 492 105 243 1.06e-17 84.3
MsG0180000161.01.T01 MTR_5g044530 43.617 94 51 1 401 492 14 107 2.95e-17 82.0
MsG0180000161.01.T01 MTR_8g085400 47.436 78 38 1 409 486 33 107 3.20e-17 78.2
MsG0180000161.01.T01 MTR_1g116870 42.857 84 48 0 409 492 276 359 1.70e-16 81.3
MsG0180000161.01.T01 MTR_8g088120 50.000 78 33 3 421 495 60 134 1.68e-15 76.3
MsG0180000161.01.T01 MTR_5g015720 44.186 86 46 2 409 492 329 414 1.10e-14 76.3
MsG0180000161.01.T01 MTR_4g133735 37.931 87 53 1 407 492 26 112 1.51e-14 70.5
MsG0180000161.01.T01 MTR_5g097420 42.353 85 48 1 409 492 30 114 1.88e-14 70.1
MsG0180000161.01.T01 MTR_4g079530 42.697 89 50 1 409 496 37 125 1.97e-14 70.5
MsG0180000161.01.T01 MTR_4g083070 41.860 86 50 0 404 489 16 101 2.28e-14 72.0
MsG0180000161.01.T01 MTR_4g079530 43.529 85 47 1 409 492 37 121 4.83e-14 70.9
MsG0180000161.01.T01 MTR_2g072500 37.079 89 55 1 404 492 3 90 1.21e-13 67.0
MsG0180000161.01.T01 MTR_4g133730 34.483 87 56 1 407 492 26 112 8.10e-11 59.7
MsG0180000161.01.T01 MTR_8g063490 28.099 121 55 3 312 432 4 92 8.18e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000161.01.T01 AT4G34480 58.901 455 131 5 63 490 20 445 0.0 519
MsG0180000161.01.T01 AT2G16230 58.444 450 134 5 68 490 24 447 1.58e-179 514
MsG0180000161.01.T01 AT4G34480 63.284 335 95 3 62 369 19 352 2.97e-144 418
MsG0180000161.01.T01 AT5G42720 53.641 412 139 9 59 429 16 416 3.56e-143 419
MsG0180000161.01.T01 AT4G34480 55.372 363 106 5 155 490 1 334 1.77e-127 377
MsG0180000161.01.T01 AT5G24318 41.379 464 214 10 59 492 20 455 1.03e-113 344
MsG0180000161.01.T01 AT5G24318 41.703 458 209 10 59 486 20 449 3.56e-113 342
MsG0180000161.01.T01 AT3G55430 34.581 454 234 14 69 492 29 449 6.94e-89 280
MsG0180000161.01.T01 AT2G01630 35.153 458 233 7 66 492 20 444 9.46e-85 271
MsG0180000161.01.T01 AT2G05790 34.698 464 251 11 69 496 25 472 9.49e-84 267
MsG0180000161.01.T01 AT5G55180 33.991 456 249 7 68 494 26 458 1.31e-83 266
MsG0180000161.01.T01 AT2G01630 35.177 452 229 7 66 486 20 438 1.52e-83 266
MsG0180000161.01.T01 AT5G55180 34.298 449 243 7 68 487 26 451 3.07e-83 266
MsG0180000161.01.T01 AT5G24318 42.388 335 158 6 59 364 20 348 4.34e-83 262
MsG0180000161.01.T01 AT4G29360 35.111 450 261 6 69 490 27 473 3.93e-82 265
MsG0180000161.01.T01 AT4G29360 35.111 450 261 6 69 490 37 483 4.09e-82 265
MsG0180000161.01.T01 AT4G26830 32.895 456 251 8 68 494 24 453 2.51e-81 260
MsG0180000161.01.T01 AT4G26830 32.895 456 251 8 68 494 28 457 2.60e-81 260
MsG0180000161.01.T01 AT2G39640 33.110 447 238 7 69 490 30 440 3.44e-81 263
MsG0180000161.01.T01 AT2G39640 42.683 82 47 0 409 490 460 541 7.84e-18 87.0
MsG0180000161.01.T01 AT5G56590 32.527 455 253 5 69 494 26 455 1.47e-80 260
MsG0180000161.01.T01 AT1G32860 43.210 324 153 5 69 363 29 350 2.90e-77 249
MsG0180000161.01.T01 AT1G11820 33.333 459 244 6 64 492 39 465 6.42e-77 250
MsG0180000161.01.T01 AT1G11820 32.484 471 256 6 64 504 39 477 1.72e-76 248
MsG0180000161.01.T01 AT1G30080 41.875 320 157 4 69 361 36 353 3.45e-76 245
MsG0180000161.01.T01 AT1G30080 41.875 320 157 4 69 361 36 353 6.15e-76 245
MsG0180000161.01.T01 AT1G66250 33.983 462 240 8 63 493 26 453 9.97e-75 244
MsG0180000161.01.T01 AT5G24318 39.942 343 150 8 179 492 1 316 2.37e-74 238
MsG0180000161.01.T01 AT4G18340 39.884 346 176 5 51 369 19 359 1.93e-71 232
MsG0180000161.01.T01 AT4G18340 39.884 346 176 5 51 369 19 359 2.65e-71 232
MsG0180000161.01.T01 AT2G27500 37.695 321 172 3 69 362 29 348 3.70e-71 231
MsG0180000161.01.T01 AT2G27500 37.695 321 172 3 69 362 29 348 1.76e-70 230
MsG0180000161.01.T01 AT3G23770 31.524 479 271 11 48 492 16 471 4.00e-69 229
MsG0180000161.01.T01 AT3G07320 32.237 456 250 11 70 492 26 455 7.36e-68 225
MsG0180000161.01.T01 AT4G14080 31.072 457 257 11 69 492 42 473 2.25e-67 224
MsG0180000161.01.T01 AT3G15800 37.576 330 177 4 70 371 44 372 1.39e-66 220
MsG0180000161.01.T01 AT5G42100 37.654 324 170 5 69 362 27 348 2.71e-66 220
MsG0180000161.01.T01 AT2G01630 34.761 397 196 6 66 432 20 383 3.67e-66 219
MsG0180000161.01.T01 AT3G13560 31.965 463 252 6 60 492 17 446 3.80e-66 222
MsG0180000161.01.T01 AT3G13560 31.965 463 252 6 60 492 17 446 3.80e-66 222
MsG0180000161.01.T01 AT3G13560 31.965 463 252 6 60 492 17 446 3.80e-66 222
MsG0180000161.01.T01 AT3G13560 31.965 463 252 6 60 492 17 446 3.80e-66 222
MsG0180000161.01.T01 AT3G13560 31.965 463 252 6 60 492 17 446 3.80e-66 222
MsG0180000161.01.T01 AT5G42100 37.654 324 170 5 69 362 27 348 6.77e-66 219
MsG0180000161.01.T01 AT2G26600 34.451 328 187 3 70 370 35 361 1.18e-63 212
MsG0180000161.01.T01 AT1G11820 35.185 324 180 4 64 358 39 361 9.45e-57 194
MsG0180000161.01.T01 AT3G46570 38.415 328 162 11 69 364 27 346 1.18e-55 190
MsG0180000161.01.T01 AT2G27500 37.638 271 141 3 119 362 1 270 1.35e-55 189
MsG0180000161.01.T01 AT3G61810 36.228 334 168 9 64 363 50 372 4.20e-53 184
MsG0180000161.01.T01 AT4G16260 36.508 315 169 7 60 350 15 322 3.84e-51 178
MsG0180000161.01.T01 AT3G57270 35.127 316 174 7 69 359 27 336 2.12e-49 173
MsG0180000161.01.T01 AT4G16260 36.455 299 159 7 76 350 2 293 1.58e-48 170
MsG0180000161.01.T01 AT2G26600 34.701 268 147 3 130 370 1 267 3.93e-47 166
MsG0180000161.01.T01 AT1G77780 35.045 331 176 10 57 359 12 331 3.63e-45 162
MsG0180000161.01.T01 AT3G57260 33.228 316 174 9 69 359 32 335 3.70e-45 162
MsG0180000161.01.T01 AT3G57260 33.228 316 174 9 69 359 48 351 5.15e-45 162
MsG0180000161.01.T01 AT4G31140 29.039 458 255 18 69 492 27 448 2.19e-44 163
MsG0180000161.01.T01 AT5G20390 33.754 317 175 10 69 358 33 341 2.84e-43 157
MsG0180000161.01.T01 AT5G20870 27.312 465 262 15 69 492 30 459 7.40e-43 159
MsG0180000161.01.T01 AT5G20340 33.648 318 176 10 69 359 43 352 2.24e-41 152
MsG0180000161.01.T01 AT3G24330 28.758 459 259 17 69 492 39 464 3.44e-41 154
MsG0180000161.01.T01 AT5G20330 33.856 319 172 10 69 358 34 342 2.76e-39 146
MsG0180000161.01.T01 AT1G77790 32.484 314 178 8 73 359 34 340 3.19e-38 143
MsG0180000161.01.T01 AT3G57240 32.686 309 166 12 69 350 35 328 1.60e-36 138
MsG0180000161.01.T01 AT1G33220 32.013 303 173 8 69 345 34 329 3.29e-36 137
MsG0180000161.01.T01 AT5G64790 25.490 459 272 15 69 492 28 451 6.84e-36 139
MsG0180000161.01.T01 AT5G58090 26.258 457 271 16 69 492 22 445 7.03e-36 139
MsG0180000161.01.T01 AT2G19440 28.416 461 256 20 69 492 21 444 9.57e-36 139
MsG0180000161.01.T01 AT2G19440 28.416 461 256 20 69 492 21 444 9.57e-36 139
MsG0180000161.01.T01 AT1G64760 28.200 461 257 19 69 492 25 448 3.37e-35 137
MsG0180000161.01.T01 AT1G64760 28.200 461 257 19 69 492 25 448 3.37e-35 137
MsG0180000161.01.T01 AT5G20560 32.686 309 175 9 69 351 34 335 5.87e-35 134
MsG0180000161.01.T01 AT5G18220 26.154 455 276 13 69 492 30 455 3.33e-34 135
MsG0180000161.01.T01 AT4G17180 26.623 462 275 16 59 492 15 440 1.04e-33 133
MsG0180000161.01.T01 AT5G58480 26.374 455 268 15 69 492 26 444 8.38e-33 130
MsG0180000161.01.T01 AT3G04010 25.877 456 275 15 69 492 33 457 1.17e-31 127
MsG0180000161.01.T01 AT3G55780 30.201 298 169 9 98 363 64 354 8.03e-28 115
MsG0180000161.01.T01 AT5G63230 47.619 84 44 0 409 492 26 109 1.24e-23 95.9
MsG0180000161.01.T01 AT4G09462 48.780 82 42 0 409 490 29 110 5.92e-23 94.4
MsG0180000161.01.T01 AT4G05430 43.299 97 54 1 397 492 11 107 1.23e-22 94.4
MsG0180000161.01.T01 AT4G09465 47.561 82 43 0 409 490 31 112 1.71e-22 93.2
MsG0180000161.01.T01 AT1G66855 47.059 85 44 1 409 492 26 110 1.77e-22 92.8
MsG0180000161.01.T01 AT1G18650 48.315 89 46 0 404 492 16 104 1.87e-22 95.1
MsG0180000161.01.T01 AT4G09467 47.561 82 43 0 409 490 31 112 1.89e-22 92.8
MsG0180000161.01.T01 AT4G09464 47.561 82 43 0 409 490 31 112 1.89e-22 92.8
MsG0180000161.01.T01 AT5G67460 27.733 375 211 14 122 488 51 373 1.90e-22 99.4
MsG0180000161.01.T01 AT4G05430 43.299 97 54 1 397 492 36 132 1.96e-22 94.7
MsG0180000161.01.T01 AT1G18650 48.315 89 46 0 404 492 16 104 2.07e-22 93.2
MsG0180000161.01.T01 AT5G67460 27.441 379 215 14 122 492 51 377 2.26e-22 99.4
MsG0180000161.01.T01 AT4G05430 45.652 92 49 1 397 487 36 127 2.97e-22 92.8
MsG0180000161.01.T01 AT4G09466 46.429 84 45 0 409 492 31 114 4.62e-22 91.7
MsG0180000161.01.T01 AT5G63225 46.067 89 48 0 402 490 18 106 6.72e-22 91.3
MsG0180000161.01.T01 AT5G61130 47.191 89 47 0 404 492 16 104 8.21e-22 94.0
MsG0180000161.01.T01 AT5G63250 42.857 98 46 2 409 503 42 132 1.64e-21 90.9
MsG0180000161.01.T01 AT5G63240 41.441 111 60 2 385 492 18 126 9.47e-21 88.6
MsG0180000161.01.T01 AT4G09090 41.860 86 50 0 405 490 27 112 1.06e-20 87.8
MsG0180000161.01.T01 AT1G66870 44.578 83 45 1 409 490 26 108 3.21e-20 86.3
MsG0180000161.01.T01 AT1G66870 43.529 85 47 1 409 492 53 137 3.44e-20 87.4
MsG0180000161.01.T01 AT4G13600 46.341 82 44 0 409 490 61 142 4.44e-19 86.7
MsG0180000161.01.T01 AT4G16165 44.578 83 45 1 409 490 26 108 5.99e-18 80.1
MsG0180000161.01.T01 AT5G08000 46.067 89 48 0 404 492 16 104 1.19e-17 81.6
MsG0180000161.01.T01 AT5G08000 48.235 85 44 0 408 492 39 123 2.15e-17 81.3
MsG0180000161.01.T01 AT2G30933 41.176 119 59 5 384 495 54 168 2.38e-17 81.6
MsG0180000161.01.T01 AT1G29380 48.276 87 39 3 409 492 148 231 4.05e-17 81.6
MsG0180000161.01.T01 AT1G29380 48.276 87 39 3 409 492 148 231 4.28e-17 82.8
MsG0180000161.01.T01 AT5G53600 42.857 84 47 1 409 492 29 111 5.16e-17 77.4
MsG0180000161.01.T01 AT1G66852 42.169 83 46 2 409 490 26 107 1.28e-16 76.3
MsG0180000161.01.T01 AT2G30933 40.909 110 54 5 384 486 54 159 1.64e-16 77.4
MsG0180000161.01.T01 AT2G30933 40.909 110 54 5 384 486 54 159 1.64e-16 77.4
MsG0180000161.01.T01 AT5G53610 42.857 84 47 1 409 492 28 110 2.68e-16 75.1
MsG0180000161.01.T01 AT1G69295 45.882 85 45 1 405 489 17 100 2.76e-16 78.6
MsG0180000161.01.T01 AT1G29380 47.619 84 38 3 409 489 148 228 5.56e-16 77.8
MsG0180000161.01.T01 AT1G29380 47.619 84 38 3 409 489 148 228 5.56e-16 77.8
MsG0180000161.01.T01 AT1G09460 45.556 90 47 2 401 490 129 216 6.32e-16 79.3
MsG0180000161.01.T01 AT2G43670 37.805 82 50 1 409 490 35 115 1.64e-15 73.6
MsG0180000161.01.T01 AT2G04910 42.353 85 48 1 409 492 15 99 1.75e-15 72.8
MsG0180000161.01.T01 AT2G29735 45.238 84 44 1 409 490 31 114 1.88e-15 73.2
MsG0180000161.01.T01 AT1G78520 39.286 84 50 1 409 492 32 114 3.39e-15 72.4
MsG0180000161.01.T01 AT1G69295 45.122 82 44 1 408 489 16 96 3.98e-15 75.1
MsG0180000161.01.T01 AT1G13830 39.759 83 50 0 409 491 21 103 9.47e-15 73.6
MsG0180000161.01.T01 AT1G79480 40.476 84 50 0 409 492 311 394 9.91e-15 76.6
MsG0180000161.01.T01 AT1G79480 40.476 84 50 0 409 492 310 393 1.01e-14 76.3
MsG0180000161.01.T01 AT1G13830 39.759 83 50 0 409 491 35 117 1.06e-14 73.6
MsG0180000161.01.T01 AT2G03505 39.024 82 50 0 405 486 17 98 1.33e-14 70.9
MsG0180000161.01.T01 AT2G04910 42.500 80 45 1 409 487 15 94 1.71e-14 70.5
MsG0180000161.01.T01 AT2G03505 39.024 82 50 0 405 486 17 98 3.51e-14 70.9
MsG0180000161.01.T01 AT2G03505 39.024 82 50 0 405 486 17 98 3.51e-14 70.9
MsG0180000161.01.T01 AT2G03505 39.024 82 50 0 405 486 17 98 3.51e-14 70.9
MsG0180000161.01.T01 AT3G28250 39.024 82 49 1 407 488 1 81 6.24e-14 68.9
MsG0180000161.01.T01 AT1G26450 44.737 76 41 1 405 480 17 91 1.03e-13 70.5
MsG0180000161.01.T01 AT3G58100 40.000 85 50 1 409 492 41 125 1.05e-13 70.1
MsG0180000161.01.T01 AT5G35740 40.698 86 49 2 409 492 30 115 1.09e-13 68.2
MsG0180000161.01.T01 AT3G58100 40.000 85 50 1 409 492 117 201 3.19e-13 70.1
MsG0180000161.01.T01 AT2G43660 35.714 84 53 1 408 490 34 117 8.00e-12 62.8
MsG0180000161.01.T01 AT2G43660 35.714 84 53 1 408 490 33 116 8.94e-12 62.8

Find 141 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTCTTGGTGGTAAAATT+AGG 0.082325 1:+2228532 MsG0180000161.01.T01:CDS
CCTAACACTTGTTAATTTAC+AGG 0.202994 1:+2226491 MsG0180000161.01.T01:CDS
TGTGCAACTACAAGCAAATT+TGG 0.210617 1:+2229785 MsG0180000161.01.T01:CDS
TATATTTCCGTTACTCCTTT+TGG 0.251519 1:+2226536 MsG0180000161.01.T01:CDS
TCCTGGAAGGGCTGATAATT+TGG 0.251824 1:+2228722 MsG0180000161.01.T01:CDS
GGGTTTGTTGTCGTTTAATA+AGG 0.272334 1:+2228644 MsG0180000161.01.T01:CDS
AACATGACAAGAATGGTTTC+TGG 0.284683 1:+2226592 MsG0180000161.01.T01:CDS
TTCTCTTGGTGGTAAAATTA+GGG 0.311256 1:+2228533 MsG0180000161.01.T01:CDS
GTTGGCGAGGGATTTGATTA+TGG 0.311492 1:-2228283 None:intergenic
TCCGATTACAATTCCGATTC+CGG 0.315603 1:-2228307 None:intergenic
TTGTCGTTTAATAAGGATAC+TGG 0.317569 1:+2228651 MsG0180000161.01.T01:CDS
CCTGTAAATTAACAAGTGTT+AGG 0.324053 1:-2226491 None:intergenic
CATGAATATGTTTGATGCTC+AGG 0.324784 1:+2228803 MsG0180000161.01.T01:CDS
GACCGGCATTAGGTTGAAAA+AGG 0.325112 1:-2228752 None:intergenic
CATGCTATGTTACTATTATA+CGG 0.335966 1:-2229735 None:intergenic
ACATCAGTTAATCCTGCTTT+TGG 0.340038 1:-2229765 None:intergenic
GATTAAGCACCTGCGATCTA+AGG 0.346796 1:+2229090 MsG0180000161.01.T01:CDS
GTTGTTGGACTTGGAACTTT+TGG 0.356417 1:-2229711 None:intergenic
GTTGGTGGAAATCCAGGTTT+TGG 0.362874 1:-2228376 None:intergenic
GCATCAACTCGACCGGCATT+AGG 0.367245 1:-2228762 None:intergenic
AATGATACAAATCTTATTAA+CGG 0.369125 1:+2228465 MsG0180000161.01.T01:CDS
GCATGGTTAGCTAATGTGTT+AGG 0.371637 1:-2229870 None:intergenic
TTACTATTATACGGCGTTGT+TGG 0.396054 1:-2229726 None:intergenic
TTTCTCAGATATCGTAAGAT+AGG 0.399046 1:-2230028 None:intergenic
GCTGGTTCTGAGAAAGCCTT+CGG 0.400618 1:+2229190 MsG0180000161.01.T01:CDS
AAACCGCATGAGAACTTACT+TGG 0.402280 1:-2229984 None:intergenic
TACAATTCCGATTCCGGTGT+TGG 0.404377 1:-2228301 None:intergenic
CCATTCCTCGGAGTAAACTA+TGG 0.408450 1:+2228165 MsG0180000161.01.T01:CDS
GGATAAGGATTAATAGCAAA+AGG 0.408820 1:-2228678 None:intergenic
GATAAGGATTAATAGCAAAA+GGG 0.410562 1:-2228677 None:intergenic
AACTCGGAGCCACCTTCTGC+TGG 0.410697 1:+2228588 MsG0180000161.01.T01:CDS
TAGATCTGCACTAGATTCTA+TGG 0.412248 1:+2229014 MsG0180000161.01.T01:intron
TTATAAGCAAAATAAGGATA+AGG 0.414067 1:-2228693 None:intergenic
CTGGTTCTGAGAAAGCCTTC+GGG 0.427029 1:+2229191 MsG0180000161.01.T01:CDS
TCCCTCGCCAACACCGGAAT+CGG 0.431599 1:+2228294 MsG0180000161.01.T01:CDS
ATGTTGCTGGCGGGATAGTA+AGG 0.437537 1:-2228405 None:intergenic
TTTGCTTATAAAAGTGATCC+TGG 0.441378 1:+2228705 MsG0180000161.01.T01:CDS
CTAGATTCTATGGCGGAGAC+AGG 0.442707 1:+2229024 MsG0180000161.01.T01:intron
ATCCAAGTTTCGCCAAAACC+TGG 0.446819 1:+2228364 MsG0180000161.01.T01:CDS
GAGGACGTTGGTGGAAATCC+AGG 0.449002 1:-2228382 None:intergenic
TTATACGGCGTTGTTGGACT+TGG 0.451067 1:-2229720 None:intergenic
GGATTTGATTATGGCGGGAT+CGG 0.452407 1:-2228274 None:intergenic
GCAAATTTGGATTATGCTTG+TGG 0.452527 1:+2229798 MsG0180000161.01.T01:CDS
CATTCTTGTCATGTTTACCT+TGG 0.452555 1:-2226584 None:intergenic
GCCAAATTATCAGCCCTTCC+AGG 0.454800 1:-2228723 None:intergenic
GGAGGGTATGTCGCCGTTTG+CGG 0.457744 1:-2228331 None:intergenic
ATCTCTTCTATCACACTGTT+GGG 0.461725 1:+2229907 MsG0180000161.01.T01:CDS
ATTCTTGTCATGTTTACCTT+GGG 0.466359 1:-2226583 None:intergenic
GCTTTCTCAGAACCAGCTCC+AGG 0.467861 1:-2229184 None:intergenic
CAAGGTAAACATGACAAGAA+TGG 0.469473 1:+2226585 MsG0180000161.01.T01:CDS
ACCGGAATCGGAATTGTAAT+CGG 0.470248 1:+2228306 MsG0180000161.01.T01:CDS
TATGATGAGGACTTGAAGCC+TGG 0.475102 1:+2229166 MsG0180000161.01.T01:CDS
CTTGATGAAGCTTCTCTTGG+TGG 0.477574 1:+2228522 MsG0180000161.01.T01:CDS
GCGCTTGATGAAGCTTCTCT+TGG 0.478524 1:+2228519 MsG0180000161.01.T01:CDS
CCATAGTTTACTCCGAGGAA+TGG 0.481901 1:-2228165 None:intergenic
TTGGATTATGCTTGTGGGCA+GGG 0.482048 1:+2229804 MsG0180000161.01.T01:CDS
TGGATTATGCTTGTGGGCAG+GGG 0.487006 1:+2229805 MsG0180000161.01.T01:CDS
TAGTAGCCCCGTGGTATCTC+CGG 0.488228 1:+2229288 MsG0180000161.01.T01:CDS
TTTCGAAGGCGGTGGTTTGG+AGG 0.488710 1:-2228233 None:intergenic
AAACTGCACTTAAAACCAAA+AGG 0.490236 1:-2226551 None:intergenic
CAAATTTGGATTATGCTTGT+GGG 0.491169 1:+2229799 MsG0180000161.01.T01:CDS
TTTGGATTATGCTTGTGGGC+AGG 0.494350 1:+2229803 MsG0180000161.01.T01:CDS
TCCGATTCCGGTGTTGGCGA+GGG 0.494660 1:-2228295 None:intergenic
GTGGAAGGTTGTCGGCGACT+TGG 0.495042 1:-2228188 None:intergenic
CATAGTTTACTCCGAGGAAT+GGG 0.498903 1:-2228164 None:intergenic
TGGTAAAATTAGGGTTTCTA+CGG 0.503871 1:+2228542 MsG0180000161.01.T01:CDS
GCGAGGGATTTGATTATGGC+GGG 0.506513 1:-2228279 None:intergenic
AATCTCTTCTATCACACTGT+TGG 0.507292 1:+2229906 MsG0180000161.01.T01:CDS
GGAAGCTGGTGGAAGGTTGT+CGG 0.512737 1:-2228196 None:intergenic
AGCACCTGCGATCTAAGGTT+GGG 0.513066 1:+2229095 MsG0180000161.01.T01:CDS
GCATGGTGTGTGCCAAAAGC+AGG 0.513211 1:+2229753 MsG0180000161.01.T01:CDS
AATATATAGCAAGTCATCAA+AGG 0.513280 1:-2226519 None:intergenic
CGGTGGCGGAAGCTGGTGGA+AGG 0.514839 1:-2228203 None:intergenic
GAGGACTTGAAGCCTGGAGC+TGG 0.515732 1:+2229172 MsG0180000161.01.T01:CDS
ACTGATTTCCCTGGCATCAG+TGG 0.516517 1:-2229121 None:intergenic
GGTGATGAGGATGATGTTGC+TGG 0.516557 1:-2228418 None:intergenic
GCCTTTGCATTCTCAATACT+CGG 0.519040 1:-2229052 None:intergenic
GTTGGGACACCACTGATGCC+AGG 0.519883 1:+2229112 MsG0180000161.01.T01:CDS
TTCCGATTCCGGTGTTGGCG+AGG 0.521696 1:-2228296 None:intergenic
GGTTCAAAACAAGCACCTCC+TGG 0.528280 1:-2229849 None:intergenic
ATTGTAATCGGAGCCGCAAA+CGG 0.531017 1:+2228318 MsG0180000161.01.T01:CDS
ATCAAATCCCTCGCCAACAC+CGG 0.533535 1:+2228288 MsG0180000161.01.T01:CDS
CTTATAAAAGTGATCCTGGA+AGG 0.535941 1:+2228709 MsG0180000161.01.T01:CDS
GGCGAGGGATTTGATTATGG+CGG 0.537617 1:-2228280 None:intergenic
CTTCAAGTCCTCATCATACA+AGG 0.538927 1:-2229161 None:intergenic
CGACAACAAACCCTGCAAAA+CGG 0.539250 1:-2228634 None:intergenic
AGTATTTGCATCAACTCGAC+CGG 0.541663 1:-2228769 None:intergenic
ATAGTAAGGGAGGACGTTGG+TGG 0.542466 1:-2228391 None:intergenic
AAGCACCTGCGATCTAAGGT+TGG 0.545052 1:+2229094 MsG0180000161.01.T01:CDS
TTTGCGGTGGCGGAAGCTGG+TGG 0.546230 1:-2228207 None:intergenic
TGTGAGGAAACTTACTTGCA+AGG 0.552392 1:-2226642 None:intergenic
TAGTGCTTTGTTGCTTAGAG+AGG 0.556972 1:-2229252 None:intergenic
ATATATAGCAAGTCATCAAA+GGG 0.557917 1:-2226518 None:intergenic
GATACCACGGGGCTACTAGT+AGG 0.558920 1:-2229283 None:intergenic
AGTGTGATAGAAGAGATTCA+TGG 0.564034 1:-2229901 None:intergenic
ATCAGTGTTGTAAAGCCCGA+AGG 0.564335 1:-2229206 None:intergenic
GTGTCCCAACCTTAGATCGC+AGG 0.566462 1:-2229099 None:intergenic
CAAAACAAGCACCTCCTGGT+TGG 0.568304 1:-2229845 None:intergenic
ATAAGGATTAATAGCAAAAG+GGG 0.575778 1:-2228676 None:intergenic
TATGTGTCCACTGATTTCCC+TGG 0.578850 1:-2229130 None:intergenic
CTTAAAACCAAAAGGAGTAA+CGG 0.581892 1:-2226543 None:intergenic
GCAGAATCTGACCCATTCCT+CGG 0.583867 1:+2228153 MsG0180000161.01.T01:CDS
CTTCGTTGCCGACGGTGATG+AGG 0.587261 1:-2228431 None:intergenic
CAAACGATGATCTATGACGC+TGG 0.587813 1:+2229229 MsG0180000161.01.T01:CDS
ACTTGGATCGGAAGCGAGGG+AGG 0.590059 1:-2228349 None:intergenic
ATGAGGATGATGTTGCTGGC+GGG 0.593640 1:-2228414 None:intergenic
TCATGAAAACTTCCAGCAGA+AGG 0.595377 1:-2228600 None:intergenic
CGAAACTTGGATCGGAAGCG+AGG 0.597502 1:-2228353 None:intergenic
TTCTACGGTTCATACGATGT+CGG 0.598813 1:+2228557 MsG0180000161.01.T01:CDS
TTGGGACACCACTGATGCCA+GGG 0.599886 1:+2229113 MsG0180000161.01.T01:CDS
CGTATAATAGTAACATAGCA+TGG 0.600001 1:+2229736 MsG0180000161.01.T01:CDS
CATCTTTGCCTTGTATGATG+AGG 0.600659 1:+2229153 MsG0180000161.01.T01:CDS
GAAACTTGGATCGGAAGCGA+GGG 0.603669 1:-2228352 None:intergenic
AACCGCATGAGAACTTACTT+GGG 0.610293 1:-2229983 None:intergenic
CGGGATCGGTTCCGTATAGT+CGG 0.611085 1:-2228260 None:intergenic
GCAGTTTCAAAGTCTTCCCA+AGG 0.612888 1:+2226567 MsG0180000161.01.T01:CDS
AACCCAAGTAAGTTCTCATG+CGG 0.613642 1:+2229981 MsG0180000161.01.T01:CDS
AATTCATACCGGAGATACCA+CGG 0.615954 1:-2229296 None:intergenic
GATTGTAGCTTAATCCAACC+AGG 0.618358 1:+2229831 MsG0180000161.01.T01:CDS
AACATCATCCTCATCACCGT+CGG 0.621796 1:+2228423 MsG0180000161.01.T01:CDS
ATTCATACCGGAGATACCAC+GGG 0.621948 1:-2229295 None:intergenic
TAGATTCTATGGCGGAGACA+GGG 0.623544 1:+2229025 MsG0180000161.01.T01:intron
TTATAAAAGTGATCCTGGAA+GGG 0.632786 1:+2228710 MsG0180000161.01.T01:CDS
CTTGGATCGGAAGCGAGGGA+GGG 0.633878 1:-2228348 None:intergenic
GAGAATGCAAAGGCTTACAA+TGG 0.637829 1:+2229061 MsG0180000161.01.T01:CDS
TGTTGCTGGCGGGATAGTAA+GGG 0.641175 1:-2228404 None:intergenic
TGAAAACTTCCAGCAGAAGG+TGG 0.643067 1:-2228597 None:intergenic
GATTCATGGCGTATGCAGCA+TGG 0.644106 1:-2229887 None:intergenic
TGCTGGCGGGATAGTAAGGG+AGG 0.653268 1:-2228401 None:intergenic
AGTGATGACTTCGTTGCCGA+CGG 0.661992 1:-2228439 None:intergenic
GATGAGGATGATGTTGCTGG+CGG 0.665630 1:-2228415 None:intergenic
ACGGGGCTACTAGTAGGTGT+AGG 0.667625 1:-2229277 None:intergenic
ACCGAGTATTGAGAATGCAA+AGG 0.668938 1:+2229051 MsG0180000161.01.T01:CDS
GGGATAGTAAGGGAGGACGT+TGG 0.674640 1:-2228394 None:intergenic
ATTCTATGGCGGAGACAGGG+TGG 0.680837 1:+2229028 MsG0180000161.01.T01:CDS
ACTGATGCCAGGGAAATCAG+TGG 0.687146 1:+2229123 MsG0180000161.01.T01:CDS
ATCTGCACTAGATTCTATGG+CGG 0.697229 1:+2229017 MsG0180000161.01.T01:intron
CTTGGCCATAGTTTACTCCG+AGG 0.717839 1:-2228170 None:intergenic
TACACCTACTAGTAGCCCCG+TGG 0.742913 1:+2229279 MsG0180000161.01.T01:CDS
TGTAGCTTAATCCAACCAGG+AGG 0.770988 1:+2229834 MsG0180000161.01.T01:CDS
TTCATACCGGAGATACCACG+GGG 0.792540 1:-2229294 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAATTAAAAAAAAAAAAAC+TGG + Chr1:2227800-2227819 MsG0180000161.01.T01:intron 10.0%
!! CATTATATATATTATCAAAT+AGG - Chr1:2227446-2227465 None:intergenic 10.0%
!!! CTATTTGATAATATATATAA+TGG + Chr1:2227444-2227463 MsG0180000161.01.T01:intron 10.0%
!! AATGATACAAATCTTATTAA+CGG + Chr1:2228465-2228484 MsG0180000161.01.T01:CDS 15.0%
!! ATATAATCAGAATTGATATT+TGG - Chr1:2228834-2228853 None:intergenic 15.0%
!! TTAAAACATCATCAAAAATT+AGG - Chr1:2226821-2226840 None:intergenic 15.0%
!! AACATTTCTTATTCTAACTA+TGG + Chr1:2227313-2227332 MsG0180000161.01.T01:intron 20.0%
!! ATTCAATCATCATTCAAAAT+CGG - Chr1:2227680-2227699 None:intergenic 20.0%
!! ATTCACAAAATTAGAGATTA+TGG - Chr1:2226939-2226958 None:intergenic 20.0%
!! TTATAAGCAAAATAAGGATA+AGG - Chr1:2228696-2228715 None:intergenic 20.0%
!! TTGACTTTGTCAAAAAAAAA+AGG - Chr1:2227725-2227744 None:intergenic 20.0%
!!! GTCAATTTCTAAAAATTCTT+AGG - Chr1:2227984-2228003 None:intergenic 20.0%
!!! TAATTATAAGCTCAGTTTTA+AGG - Chr1:2227591-2227610 None:intergenic 20.0%
!!! TAATTTTGTGAATTACAACT+GGG + Chr1:2226946-2226965 MsG0180000161.01.T01:intron 20.0%
!!! TCACTTTTATAAGCAAAATA+AGG - Chr1:2228702-2228721 None:intergenic 20.0%
!!! TCTTTTTAATCTGTTCTTAA+CGG + Chr1:2226875-2226894 MsG0180000161.01.T01:intron 20.0%
! AAACAAATGAAAAATGCTAG+CGG - Chr1:2226844-2226863 None:intergenic 25.0%
! AATATATAGCAAGTCATCAA+AGG - Chr1:2226522-2226541 None:intergenic 25.0%
! AATTGATGAATGAGCAATAA+AGG - Chr1:2227271-2227290 None:intergenic 25.0%
! ATAAGGATTAATAGCAAAAG+GGG - Chr1:2228679-2228698 None:intergenic 25.0%
! ATATATAGCAAGTCATCAAA+GGG - Chr1:2226521-2226540 None:intergenic 25.0%
! ATTGATGAATGAGCAATAAA+GGG - Chr1:2227270-2227289 None:intergenic 25.0%
! CATGCTATGTTACTATTATA+CGG - Chr1:2229738-2229757 None:intergenic 25.0%
! GAAATAATCATCTTCCATAA+AGG + Chr1:2227158-2227177 MsG0180000161.01.T01:intron 25.0%
! GATAAGGATTAATAGCAAAA+GGG - Chr1:2228680-2228699 None:intergenic 25.0%
! TAAAGTGATAGAATTCATAC+CGG - Chr1:2229310-2229329 None:intergenic 25.0%
! TGATGTTGTGATATATGTTT+CGG - Chr1:2227953-2227972 None:intergenic 25.0%
! TGTGAAAAATCACAAGTTAA+TGG - Chr1:2229939-2229958 None:intergenic 25.0%
! TTCAATCATCATTCAAAATC+GGG - Chr1:2227679-2227698 None:intergenic 25.0%
! TTTAGATAACCTAGTTAGAT+TGG - Chr1:2227897-2227916 None:intergenic 25.0%
!! CTAATTTTGTGAATTACAAC+TGG + Chr1:2226945-2226964 MsG0180000161.01.T01:intron 25.0%
!! TTCTTTGTTTCATTAAGTTG+AGG + Chr1:2226735-2226754 MsG0180000161.01.T01:intron 25.0%
!!! AAATATTTATTTTCAGCCGT+TGG + Chr1:2227019-2227038 MsG0180000161.01.T01:intron 25.0%
!!! ATAGAAGAATTTTTAAGCAG+AGG + Chr1:2228009-2228028 MsG0180000161.01.T01:intron 25.0%
!!! GAAGATGATTATTTCTACAA+GGG - Chr1:2227153-2227172 None:intergenic 25.0%
!!! TAAATATTTTTACTCTCCCA+CGG - Chr1:2227008-2227027 None:intergenic 25.0%
AAACTGCACTTAAAACCAAA+AGG - Chr1:2226554-2226573 None:intergenic 30.0%
AACAAAGCGGAATTCTTAAA+CGG + Chr1:2229547-2229566 MsG0180000161.01.T01:intron 30.0%
AGTATGAATCTGAACTTTAC+TGG - Chr1:2227402-2227421 None:intergenic 30.0%
ATGAAAATGATGATACTTGG+TGG - Chr1:2229401-2229420 None:intergenic 30.0%
ATTCTTGTCATGTTTACCTT+GGG - Chr1:2226586-2226605 None:intergenic 30.0%
CAAATTTGGATTATGCTTGT+GGG + Chr1:2229799-2229818 MsG0180000161.01.T01:CDS 30.0%
CCTGTAAATTAACAAGTGTT+AGG - Chr1:2226494-2226513 None:intergenic 30.0%
CGTATAATAGTAACATAGCA+TGG + Chr1:2229736-2229755 MsG0180000161.01.T01:CDS 30.0%
CTTAAAACCAAAAGGAGTAA+CGG - Chr1:2226546-2226565 None:intergenic 30.0%
GATTAATGATTGCAAAATGC+TGG - Chr1:2229581-2229600 None:intergenic 30.0%
GGATAAGGATTAATAGCAAA+AGG - Chr1:2228681-2228700 None:intergenic 30.0%
GGTATGAAAATGATGATACT+TGG - Chr1:2229404-2229423 None:intergenic 30.0%
TGCATAGTGTTTATAGTCTT+CGG + Chr1:2227747-2227766 MsG0180000161.01.T01:intron 30.0%
TGGTAAAATTAGGGTTTCTA+CGG + Chr1:2228542-2228561 MsG0180000161.01.T01:CDS 30.0%
TGTAACTGAGATTGTAAGAA+GGG - Chr1:2226669-2226688 None:intergenic 30.0%
TTATAAAAGTGATCCTGGAA+GGG + Chr1:2228710-2228729 MsG0180000161.01.T01:CDS 30.0%
TTATTGTCAAATTACCCTAC+TGG + Chr1:2227370-2227389 MsG0180000161.01.T01:intron 30.0%
TTGAATTTGATTGAAGACTC+CGG + Chr1:2229471-2229490 MsG0180000161.01.T01:intron 30.0%
TTTGCTTATAAAAGTGATCC+TGG + Chr1:2228705-2228724 MsG0180000161.01.T01:CDS 30.0%
! CCTAACACTTGTTAATTTAC+AGG + Chr1:2226491-2226510 MsG0180000161.01.T01:CDS 30.0%
! TATATTTCCGTTACTCCTTT+TGG + Chr1:2226536-2226555 MsG0180000161.01.T01:CDS 30.0%
! TTAGATCCATGTTTCTGATA+AGG + Chr1:2227482-2227501 MsG0180000161.01.T01:intron 30.0%
! TTCTCTTGGTGGTAAAATTA+GGG + Chr1:2228533-2228552 MsG0180000161.01.T01:CDS 30.0%
! TTGTCGTTTAATAAGGATAC+TGG + Chr1:2228651-2228670 MsG0180000161.01.T01:CDS 30.0%
! TTTAAGAATTCCGCTTTGTT+TGG - Chr1:2229547-2229566 None:intergenic 30.0%
!! CATCCTAGTTTTCAATGAAT+TGG - Chr1:2228036-2228055 None:intergenic 30.0%
!! CTAGTTTTTGATATTGAGAG+AGG - Chr1:2227780-2227799 None:intergenic 30.0%
!! GGAAGATGATTATTTCTACA+AGG - Chr1:2227154-2227173 None:intergenic 30.0%
!! TATATCCTTTAATTTTGCCC+AGG + Chr1:2226785-2226804 MsG0180000161.01.T01:intron 30.0%
!! TCAAAATTTTATGAGTGTCG+AGG + Chr1:2228871-2228890 MsG0180000161.01.T01:intron 30.0%
!! TGTTAGCTTTGAAGTTAAAG+TGG + Chr1:2228964-2228983 MsG0180000161.01.T01:intron 30.0%
!!! GAAACAAGTGATTTTGACTT+TGG - Chr1:2226718-2226737 None:intergenic 30.0%
AAATTAGGCAAAGTAAGACC+TGG - Chr1:2226806-2226825 None:intergenic 35.0%
AACATGACAAGAATGGTTTC+TGG + Chr1:2226592-2226611 MsG0180000161.01.T01:CDS 35.0%
AAGTTCTACACCAAACAAAG+CGG + Chr1:2229534-2229553 MsG0180000161.01.T01:intron 35.0%
AATCTCTTCTATCACACTGT+TGG + Chr1:2229906-2229925 MsG0180000161.01.T01:CDS 35.0%
AATCTTCAACAGTGCCTTTA+TGG - Chr1:2227175-2227194 None:intergenic 35.0%
AATTAGGCAAAGTAAGACCT+GGG - Chr1:2226805-2226824 None:intergenic 35.0%
ACATGGATCTAAACTTCAGA+TGG - Chr1:2227474-2227493 None:intergenic 35.0%
AGTGTGATAGAAGAGATTCA+TGG - Chr1:2229904-2229923 None:intergenic 35.0%
ATAAAGGGCTACGATGATAA+TGG - Chr1:2227255-2227274 None:intergenic 35.0%
ATCTCTTCTATCACACTGTT+GGG + Chr1:2229907-2229926 MsG0180000161.01.T01:CDS 35.0%
CAAGGTAAACATGACAAGAA+TGG + Chr1:2226585-2226604 MsG0180000161.01.T01:CDS 35.0%
CATGAATATGTTTGATGCTC+AGG + Chr1:2228803-2228822 MsG0180000161.01.T01:CDS 35.0%
CATTCTTGTCATGTTTACCT+TGG - Chr1:2226587-2226606 None:intergenic 35.0%
CTTATAAAAGTGATCCTGGA+AGG + Chr1:2228709-2228728 MsG0180000161.01.T01:CDS 35.0%
GCAAATTTGGATTATGCTTG+TGG + Chr1:2229798-2229817 MsG0180000161.01.T01:CDS 35.0%
GCATAGTGTTTATAGTCTTC+GGG + Chr1:2227748-2227767 MsG0180000161.01.T01:intron 35.0%
GGACCAATTCATTGAAAACT+AGG + Chr1:2228030-2228049 MsG0180000161.01.T01:intron 35.0%
GTGTAACTGAGATTGTAAGA+AGG - Chr1:2226670-2226689 None:intergenic 35.0%
TAAGACCTGGGCAAAATTAA+AGG - Chr1:2226793-2226812 None:intergenic 35.0%
TAGAACAGTTTCAAGATGAG+AGG - Chr1:2229425-2229444 None:intergenic 35.0%
TAGATCTGCACTAGATTCTA+TGG + Chr1:2229014-2229033 MsG0180000161.01.T01:intron 35.0%
TGGCACGAGCAAATAAATTT+AGG - Chr1:2227850-2227869 None:intergenic 35.0%
TGTGCAACTACAAGCAAATT+TGG + Chr1:2229785-2229804 MsG0180000161.01.T01:CDS 35.0%
TTACTATTATACGGCGTTGT+TGG - Chr1:2229729-2229748 None:intergenic 35.0%
TTCGAAAAAGTCCGACTATA+CGG + Chr1:2228249-2228268 MsG0180000161.01.T01:CDS 35.0%
! AATGGCGACAAAGATGTTTT+TGG - Chr1:2227237-2227256 None:intergenic 35.0%
! ACATCAGTTAATCCTGCTTT+TGG - Chr1:2229768-2229787 None:intergenic 35.0%
! ATAACCTAGTTAGATTGGCT+CGG - Chr1:2227892-2227911 None:intergenic 35.0%
! CTTCTCTTGGTGGTAAAATT+AGG + Chr1:2228532-2228551 MsG0180000161.01.T01:CDS 35.0%
! GAATATAGTACCGTTTTGCA+GGG + Chr1:2228624-2228643 MsG0180000161.01.T01:CDS 35.0%
! TATTTCTACAAGGGTGGATT+TGG - Chr1:2227144-2227163 None:intergenic 35.0%
! TGAATATAGTACCGTTTTGC+AGG + Chr1:2228623-2228642 MsG0180000161.01.T01:CDS 35.0%
! TTTTGCATGTTCTGTATAGC+TGG - Chr1:2228498-2228517 None:intergenic 35.0%
!! ACTTTTGGCGTTGAATTCAT+AGG - Chr1:2229699-2229718 None:intergenic 35.0%
!! CTTTGTTTGGTGTAGAACTT+GGG - Chr1:2229534-2229553 None:intergenic 35.0%
!! GATGATTATTTCTACAAGGG+TGG - Chr1:2227150-2227169 None:intergenic 35.0%
!! GGGTTTGTTGTCGTTTAATA+AGG + Chr1:2228644-2228663 MsG0180000161.01.T01:CDS 35.0%
!! TTTACTGGAAAGTACCAGTA+GGG - Chr1:2227387-2227406 None:intergenic 35.0%
!!! GATGTCGGTTTTGAAAAACT+CGG + Chr1:2228572-2228591 MsG0180000161.01.T01:CDS 35.0%
AAACCGCATGAGAACTTACT+TGG - Chr1:2229987-2230006 None:intergenic 40.0%
AACCCAAGTAAGTTCTCATG+CGG + Chr1:2229981-2230000 MsG0180000161.01.T01:CDS 40.0%
AACCGCATGAGAACTTACTT+GGG - Chr1:2229986-2230005 None:intergenic 40.0%
AATTCATACCGGAGATACCA+CGG - Chr1:2229299-2229318 None:intergenic 40.0%
ACCGGAATCGGAATTGTAAT+CGG + Chr1:2228306-2228325 MsG0180000161.01.T01:CDS 40.0%
AGATTGTAAGAAGGGTTGTG+AGG - Chr1:2226661-2226680 None:intergenic 40.0%
AGTATTTGCATCAACTCGAC+CGG - Chr1:2228772-2228791 None:intergenic 40.0%
ATCTGCACTAGATTCTATGG+CGG + Chr1:2229017-2229036 MsG0180000161.01.T01:intron 40.0%
CATAGTTTACTCCGAGGAAT+GGG - Chr1:2228167-2228186 None:intergenic 40.0%
CATCTTTGCCTTGTATGATG+AGG + Chr1:2229153-2229172 MsG0180000161.01.T01:CDS 40.0%
CATGAGCTTTCACTATCCAA+CGG - Chr1:2227038-2227057 None:intergenic 40.0%
CTTCAAGTCCTCATCATACA+AGG - Chr1:2229164-2229183 None:intergenic 40.0%
GAGAATGCAAAGGCTTACAA+TGG + Chr1:2229061-2229080 MsG0180000161.01.T01:CDS 40.0%
GATTGTAGCTTAATCCAACC+AGG + Chr1:2229831-2229850 MsG0180000161.01.T01:CDS 40.0%
GCCTTTGCATTCTCAATACT+CGG - Chr1:2229055-2229074 None:intergenic 40.0%
TACTTTATCCCTCGTGTACA+TGG + Chr1:2228895-2228914 MsG0180000161.01.T01:intron 40.0%
TCATGAAAACTTCCAGCAGA+AGG - Chr1:2228603-2228622 None:intergenic 40.0%
TCCGATTACAATTCCGATTC+CGG - Chr1:2228310-2228329 None:intergenic 40.0%
TGTGAGGAAACTTACTTGCA+AGG - Chr1:2226645-2226664 None:intergenic 40.0%
TGTTTATAGTCTTCGGGTCA+AGG + Chr1:2227754-2227773 MsG0180000161.01.T01:intron 40.0%
TTCTACGGTTCATACGATGT+CGG + Chr1:2228557-2228576 MsG0180000161.01.T01:CDS 40.0%
TTCTCTATTCTCTCTCCTCT+TGG + Chr1:2227107-2227126 MsG0180000161.01.T01:intron 40.0%
TTGGACAAGAAAGAACCAAG+AGG - Chr1:2227125-2227144 None:intergenic 40.0%
! ACTGGAGTTTTCGATACTTC+CGG - Chr1:2229493-2229512 None:intergenic 40.0%
! CCATGTTTCTGATAAGGTGT+GGG + Chr1:2227488-2227507 MsG0180000161.01.T01:intron 40.0%
! GCATGGTTAGCTAATGTGTT+AGG - Chr1:2229873-2229892 None:intergenic 40.0%
! GTTGTTGGACTTGGAACTTT+TGG - Chr1:2229714-2229733 None:intergenic 40.0%
! TAGTGCTTTGTTGCTTAGAG+AGG - Chr1:2229255-2229274 None:intergenic 40.0%
! TCCATGTTTCTGATAAGGTG+TGG + Chr1:2227487-2227506 MsG0180000161.01.T01:intron 40.0%
! TGATGATACTTGGTGGTTGA+AGG - Chr1:2229394-2229413 None:intergenic 40.0%
!! AAGGCACTGTTGAAGATTTC+TGG + Chr1:2227177-2227196 MsG0180000161.01.T01:intron 40.0%
!! ACCGAGTATTGAGAATGCAA+AGG + Chr1:2229051-2229070 MsG0180000161.01.T01:CDS 40.0%
!! CTTTACTGGAAAGTACCAGT+AGG - Chr1:2227388-2227407 None:intergenic 40.0%
!! GCTTTGTTTGGTGTAGAACT+TGG - Chr1:2229535-2229554 None:intergenic 40.0%
!!! GTATAGTCGGACTTTTTCGA+AGG - Chr1:2228250-2228269 None:intergenic 40.0%
!!! TGCCTTTTTCAACCTAATGC+CGG + Chr1:2228750-2228769 MsG0180000161.01.T01:CDS 40.0%
AACATCATCCTCATCACCGT+CGG + Chr1:2228423-2228442 MsG0180000161.01.T01:CDS 45.0%
AAGTGGAGTGTGTATTGTGC+AGG + Chr1:2228981-2229000 MsG0180000161.01.T01:intron 45.0%
ACTTGACTCCATGTACACGA+GGG - Chr1:2228906-2228925 None:intergenic 45.0%
ATCAGTGTTGTAAAGCCCGA+AGG - Chr1:2229209-2229228 None:intergenic 45.0%
ATCCAAGTTTCGCCAAAACC+TGG + Chr1:2228364-2228383 MsG0180000161.01.T01:CDS 45.0%
ATTCATACCGGAGATACCAC+GGG - Chr1:2229298-2229317 None:intergenic 45.0%
ATTGTAATCGGAGCCGCAAA+CGG + Chr1:2228318-2228337 MsG0180000161.01.T01:CDS 45.0%
CAAACGATGATCTATGACGC+TGG + Chr1:2229229-2229248 MsG0180000161.01.T01:CDS 45.0%
CCATAGTTTACTCCGAGGAA+TGG - Chr1:2228168-2228187 None:intergenic 45.0%
CCATTCCTCGGAGTAAACTA+TGG + Chr1:2228165-2228184 MsG0180000161.01.T01:CDS 45.0%
CCCACACCTTATCAGAAACA+TGG - Chr1:2227491-2227510 None:intergenic 45.0%
CGACAACAAACCCTGCAAAA+CGG - Chr1:2228637-2228656 None:intergenic 45.0%
CTTAATAGGTTTCCCACCGT+GGG - Chr1:2227548-2227567 None:intergenic 45.0%
CTTGATAAGTCTCTCACCGT+GGG + Chr1:2226989-2227008 MsG0180000161.01.T01:intron 45.0%
CTTGATGAAGCTTCTCTTGG+TGG + Chr1:2228522-2228541 MsG0180000161.01.T01:CDS 45.0%
GATTAAGCACCTGCGATCTA+AGG + Chr1:2229090-2229109 MsG0180000161.01.T01:CDS 45.0%
GCAGTTTCAAAGTCTTCCCA+AGG + Chr1:2226567-2226586 MsG0180000161.01.T01:CDS 45.0%
GTTGGCGAGGGATTTGATTA+TGG - Chr1:2228286-2228305 None:intergenic 45.0%
GTTTCTGATAAGGTGTGGGA+GGG + Chr1:2227492-2227511 MsG0180000161.01.T01:intron 45.0%
TACAATTCCGATTCCGGTGT+TGG - Chr1:2228304-2228323 None:intergenic 45.0%
TACTTGACTCCATGTACACG+AGG - Chr1:2228907-2228926 None:intergenic 45.0%
TATGATGAGGACTTGAAGCC+TGG + Chr1:2229166-2229185 MsG0180000161.01.T01:CDS 45.0%
TCCTGGAAGGGCTGATAATT+TGG + Chr1:2228722-2228741 MsG0180000161.01.T01:CDS 45.0%
TGAAAACTTCCAGCAGAAGG+TGG - Chr1:2228600-2228619 None:intergenic 45.0%
TGTAGCTTAATCCAACCAGG+AGG + Chr1:2229834-2229853 MsG0180000161.01.T01:CDS 45.0%
TGTGAATTACAACTGGGCCA+AGG + Chr1:2226952-2226971 MsG0180000161.01.T01:intron 45.0%
TTATACGGCGTTGTTGGACT+TGG - Chr1:2229723-2229742 None:intergenic 45.0%
TTGGATTATGCTTGTGGGCA+GGG + Chr1:2229804-2229823 MsG0180000161.01.T01:CDS 45.0%
TTTGGATTATGCTTGTGGGC+AGG + Chr1:2229803-2229822 MsG0180000161.01.T01:CDS 45.0%
! ACTTGGTGGTTGAAGGTTCA+TGG - Chr1:2229387-2229406 None:intergenic 45.0%
! GGATTTGATTATGGCGGGAT+CGG - Chr1:2228277-2228296 None:intergenic 45.0%
! TAGATTCTATGGCGGAGACA+GGG + Chr1:2229025-2229044 MsG0180000161.01.T01:intron 45.0%
! TGTTTCTGATAAGGTGTGGG+AGG + Chr1:2227491-2227510 MsG0180000161.01.T01:intron 45.0%
!! ATCCAGGTTTTGGCGAAACT+TGG - Chr1:2228369-2228388 None:intergenic 45.0%
!! GACCGGCATTAGGTTGAAAA+AGG - Chr1:2228755-2228774 None:intergenic 45.0%
!! GGTTTTGGCGAAACTTGGAT+CGG - Chr1:2228364-2228383 None:intergenic 45.0%
!! GTGAGATTGGTTTGAGAGCT+TGG - Chr1:2227870-2227889 None:intergenic 45.0%
!! GTTGGTGGAAATCCAGGTTT+TGG - Chr1:2228379-2228398 None:intergenic 45.0%
!! TATGTGTCCACTGATTTCCC+TGG - Chr1:2229133-2229152 None:intergenic 45.0%
!! TTAGATTGGCTCGGTGAGAT+TGG - Chr1:2227883-2227902 None:intergenic 45.0%
!!! CAGTTTTAAGGCGCCTTCTA+GGG - Chr1:2227579-2227598 None:intergenic 45.0%
!!! TAGTCGGACTTTTTCGAAGG+CGG - Chr1:2228247-2228266 None:intergenic 45.0%
!!! TCAGTTTTAAGGCGCCTTCT+AGG - Chr1:2227580-2227599 None:intergenic 45.0%
!!! TATTTGATAATATATATAAT+GGG + Chr1:2227445-2227464 MsG0180000161.01.T01:intron 5.0%
ACTGATGCCAGGGAAATCAG+TGG + Chr1:2229123-2229142 MsG0180000161.01.T01:CDS 50.0%
AGTGATGACTTCGTTGCCGA+CGG - Chr1:2228442-2228461 None:intergenic 50.0%
ATAGTAAGGGAGGACGTTGG+TGG - Chr1:2228394-2228413 None:intergenic 50.0%
ATCAAATCCCTCGCCAACAC+CGG + Chr1:2228288-2228307 MsG0180000161.01.T01:CDS 50.0%
ATGAGGATGATGTTGCTGGC+GGG - Chr1:2228417-2228436 None:intergenic 50.0%
ATGTTGCTGGCGGGATAGTA+AGG - Chr1:2228408-2228427 None:intergenic 50.0%
ATTACAACTGGGCCAAGGCT+AGG + Chr1:2226957-2226976 MsG0180000161.01.T01:intron 50.0%
CAAAACAAGCACCTCCTGGT+TGG - Chr1:2229848-2229867 None:intergenic 50.0%
CTAGGGTGGGAGAGCTTAAT+AGG - Chr1:2227562-2227581 None:intergenic 50.0%
CTCACCGAGCCAATCTAACT+AGG + Chr1:2227885-2227904 MsG0180000161.01.T01:intron 50.0%
CTTGGCCATAGTTTACTCCG+AGG - Chr1:2228173-2228192 None:intergenic 50.0%
GAAACTTGGATCGGAAGCGA+GGG - Chr1:2228355-2228374 None:intergenic 50.0%
GATGAGGATGATGTTGCTGG+CGG - Chr1:2228418-2228437 None:intergenic 50.0%
GATTCATGGCGTATGCAGCA+TGG - Chr1:2229890-2229909 None:intergenic 50.0%
GCAGAATCTGACCCATTCCT+CGG + Chr1:2228153-2228172 MsG0180000161.01.T01:CDS 50.0%
GCCAAATTATCAGCCCTTCC+AGG - Chr1:2228726-2228745 None:intergenic 50.0%
GCGAGGGATTTGATTATGGC+GGG - Chr1:2228282-2228301 None:intergenic 50.0%
GCGCTTGATGAAGCTTCTCT+TGG + Chr1:2228519-2228538 MsG0180000161.01.T01:CDS 50.0%
GCTTAATAGGTTTCCCACCG+TGG - Chr1:2227549-2227568 None:intergenic 50.0%
GCTTGATAAGTCTCTCACCG+TGG + Chr1:2226988-2227007 MsG0180000161.01.T01:intron 50.0%
GGCGAGGGATTTGATTATGG+CGG - Chr1:2228283-2228302 None:intergenic 50.0%
GGTGATGAGGATGATGTTGC+TGG - Chr1:2228421-2228440 None:intergenic 50.0%
GGTTCAAAACAAGCACCTCC+TGG - Chr1:2229852-2229871 None:intergenic 50.0%
TGGAGTGTGTATTGTGCAGG+TGG + Chr1:2228984-2229003 MsG0180000161.01.T01:intron 50.0%
TGGATTATGCTTGTGGGCAG+GGG + Chr1:2229805-2229824 MsG0180000161.01.T01:CDS 50.0%
TGTTGCTGGCGGGATAGTAA+GGG - Chr1:2228407-2228426 None:intergenic 50.0%
TTAAGCTCTCCCACCCTAGA+AGG + Chr1:2227563-2227582 MsG0180000161.01.T01:intron 50.0%
TTACAACTGGGCCAAGGCTA+GGG + Chr1:2226958-2226977 MsG0180000161.01.T01:intron 50.0%
TTCATACCGGAGATACCACG+GGG - Chr1:2229297-2229316 None:intergenic 50.0%
! AAGCACCTGCGATCTAAGGT+TGG + Chr1:2229094-2229113 MsG0180000161.01.T01:CDS 50.0%
! ACTGATTTCCCTGGCATCAG+TGG - Chr1:2229124-2229143 None:intergenic 50.0%
! AGCACCTGCGATCTAAGGTT+GGG + Chr1:2229095-2229114 MsG0180000161.01.T01:CDS 50.0%
! CTAGATTCTATGGCGGAGAC+AGG + Chr1:2229024-2229043 MsG0180000161.01.T01:intron 50.0%
!! CTGGTTCTGAGAAAGCCTTC+GGG + Chr1:2229191-2229210 MsG0180000161.01.T01:CDS 50.0%
!! CTTTTTCACTCACCCACGGT+GGG + Chr1:2227533-2227552 MsG0180000161.01.T01:intron 50.0%
!! GCTGGTTCTGAGAAAGCCTT+CGG + Chr1:2229190-2229209 MsG0180000161.01.T01:CDS 50.0%
!! GGTGGTTTGGAGGAGTTTTG+CGG - Chr1:2228226-2228245 None:intergenic 50.0%
!! TTTAAGGCGCCTTCTAGGGT+GGG - Chr1:2227575-2227594 None:intergenic 50.0%
!!! CTTTTTCGAAGGCGGTGGTT+TGG - Chr1:2228239-2228258 None:intergenic 50.0%
!!! GCTGCTTTTTCACTCACCCA+CGG + Chr1:2227529-2227548 MsG0180000161.01.T01:intron 50.0%
!!! TTTTAAGGCGCCTTCTAGGG+TGG - Chr1:2227576-2227595 None:intergenic 50.0%
ACGGGGCTACTAGTAGGTGT+AGG - Chr1:2229280-2229299 None:intergenic 55.0%
CCAGTGATTCCAGCACCAAC+AGG + Chr1:2229508-2229527 MsG0180000161.01.T01:intron 55.0%
CGAAACTTGGATCGGAAGCG+AGG - Chr1:2228356-2228375 None:intergenic 55.0%
GATACCACGGGGCTACTAGT+AGG - Chr1:2229286-2229305 None:intergenic 55.0%
GCATCAACTCGACCGGCATT+AGG - Chr1:2228765-2228784 None:intergenic 55.0%
GCATGGTGTGTGCCAAAAGC+AGG + Chr1:2229753-2229772 MsG0180000161.01.T01:CDS 55.0%
GCTTTCTCAGAACCAGCTCC+AGG - Chr1:2229187-2229206 None:intergenic 55.0%
GGAAGCTGGTGGAAGGTTGT+CGG - Chr1:2228199-2228218 None:intergenic 55.0%
GGGATAGTAAGGGAGGACGT+TGG - Chr1:2228397-2228416 None:intergenic 55.0%
GGTGTAGAACTTGGGCCTGT+TGG - Chr1:2229526-2229545 None:intergenic 55.0%
GTGTCCCAACCTTAGATCGC+AGG - Chr1:2229102-2229121 None:intergenic 55.0%
TACACCTACTAGTAGCCCCG+TGG + Chr1:2229279-2229298 MsG0180000161.01.T01:CDS 55.0%
TAGTAGCCCCGTGGTATCTC+CGG + Chr1:2229288-2229307 MsG0180000161.01.T01:CDS 55.0%
TTGGGACACCACTGATGCCA+GGG + Chr1:2229113-2229132 MsG0180000161.01.T01:CDS 55.0%
! ATTCTATGGCGGAGACAGGG+TGG + Chr1:2229028-2229047 MsG0180000161.01.T01:CDS 55.0%
! CGGGATCGGTTCCGTATAGT+CGG - Chr1:2228263-2228282 None:intergenic 55.0%
! GAGGACGTTGGTGGAAATCC+AGG - Chr1:2228385-2228404 None:intergenic 55.0%
! GGTTTGGAGGAGTTTTGCGG+TGG - Chr1:2228223-2228242 None:intergenic 55.0%
! TTGGAGGAGTTTTGCGGTGG+CGG - Chr1:2228220-2228239 None:intergenic 55.0%
! TTTCGAAGGCGGTGGTTTGG+AGG - Chr1:2228236-2228255 None:intergenic 55.0%
!! CCTGTTGGTGCTGGAATCAC+TGG - Chr1:2229511-2229530 None:intergenic 55.0%
!!! GCTTTTTCACTCACCCACGG+TGG + Chr1:2227532-2227551 MsG0180000161.01.T01:intron 55.0%
!!! TCGGACTTTTTCGAAGGCGG+TGG - Chr1:2228244-2228263 None:intergenic 55.0%
AACTCGGAGCCACCTTCTGC+TGG + Chr1:2228588-2228607 MsG0180000161.01.T01:CDS 60.0%
AACTGGGCCAAGGCTAGGGT+GGG + Chr1:2226962-2226981 MsG0180000161.01.T01:intron 60.0%
AAGCTCTCCCACCCTAGCCT+TGG - Chr1:2226972-2226991 None:intergenic 60.0%
ACTTGGATCGGAAGCGAGGG+AGG - Chr1:2228352-2228371 None:intergenic 60.0%
CTTCGTTGCCGACGGTGATG+AGG - Chr1:2228434-2228453 None:intergenic 60.0%
CTTGGATCGGAAGCGAGGGA+GGG - Chr1:2228351-2228370 None:intergenic 60.0%
GAACTTGGGCCTGTTGGTGC+TGG - Chr1:2229520-2229539 None:intergenic 60.0%
GAGGACTTGAAGCCTGGAGC+TGG + Chr1:2229172-2229191 MsG0180000161.01.T01:CDS 60.0%
GTGGAAGGTTGTCGGCGACT+TGG - Chr1:2228191-2228210 None:intergenic 60.0%
GTTGGGACACCACTGATGCC+AGG + Chr1:2229112-2229131 MsG0180000161.01.T01:CDS 60.0%
TCCCTCGCCAACACCGGAAT+CGG + Chr1:2228294-2228313 MsG0180000161.01.T01:CDS 60.0%
TGCTGGCGGGATAGTAAGGG+AGG - Chr1:2228404-2228423 None:intergenic 60.0%
! GGAGGGTATGTCGCCGTTTG+CGG - Chr1:2228334-2228353 None:intergenic 60.0%
!! TCCGATTCCGGTGTTGGCGA+GGG - Chr1:2228298-2228317 None:intergenic 60.0%
!! TTCCGATTCCGGTGTTGGCG+AGG - Chr1:2228299-2228318 None:intergenic 60.0%
!!! AGTTTTGCGGTGGCGGAAGC+TGG - Chr1:2228213-2228232 None:intergenic 60.0%
CAACTGGGCCAAGGCTAGGG+TGG + Chr1:2226961-2226980 MsG0180000161.01.T01:intron 65.0%
!! TTTGCGGTGGCGGAAGCTGG+TGG - Chr1:2228210-2228229 None:intergenic 65.0%
!! CGGTGGCGGAAGCTGGTGGA+AGG - Chr1:2228206-2228225 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 2226477 2230046 2226477 ID=MsG0180000161.01;Name=MsG0180000161.01
Chr1 mRNA 2226477 2230046 2226477 ID=MsG0180000161.01.T01;Parent=MsG0180000161.01;Name=MsG0180000161.01.T01;_AED=0.42;_eAED=0.45;_QI=0|0.33|0|1|1|1|4|0|504
Chr1 exon 2226477 2226649 2226477 ID=MsG0180000161.01.T01:exon:6768;Parent=MsG0180000161.01.T01
Chr1 exon 2228140 2228824 2228140 ID=MsG0180000161.01.T01:exon:6767;Parent=MsG0180000161.01.T01
Chr1 exon 2229028 2229309 2229028 ID=MsG0180000161.01.T01:exon:6766;Parent=MsG0180000161.01.T01
Chr1 exon 2229672 2230046 2229672 ID=MsG0180000161.01.T01:exon:6765;Parent=MsG0180000161.01.T01
Chr1 CDS 2226477 2226649 2226477 ID=MsG0180000161.01.T01:cds;Parent=MsG0180000161.01.T01
Chr1 CDS 2228140 2228824 2228140 ID=MsG0180000161.01.T01:cds;Parent=MsG0180000161.01.T01
Chr1 CDS 2229028 2229309 2229028 ID=MsG0180000161.01.T01:cds;Parent=MsG0180000161.01.T01
Chr1 CDS 2229672 2230046 2229672 ID=MsG0180000161.01.T01:cds;Parent=MsG0180000161.01.T01
Gene Sequence

>MsG0180000161.01.T01

TTGTCAAAACAAAACCTAACACTTGTTAATTTACAGGTTTACCCTTTGATGACTTGCTATATATTTCCGTTACTCCTTTTGGTTTTAAGTGCAGTTTCAAAGTCTTCCCAAGGTAAACATGACAAGAATGGTTTCTGGCTTTCTTCTACTCTTTCTCGCATTCAACCTTGCAATTTATTGTTGTGTGCAGAATCTGACCCATTCCTCGGAGTAAACTATGGCCAAGTCGCCGACAACCTTCCACCAGCTTCCGCCACCGCAAAACTCCTCCAAACCACCGCCTTCGAAAAAGTCCGACTATACGGAACCGATCCCGCCATAATCAAATCCCTCGCCAACACCGGAATCGGAATTGTAATCGGAGCCGCAAACGGCGACATACCCTCCCTCGCTTCCGATCCAAGTTTCGCCAAAACCTGGATTTCCACCAACGTCCTCCCTTACTATCCCGCCAGCAACATCATCCTCATCACCGTCGGCAACGAAGTCATCACTTCAAATGATACAAATCTTATTAACGGAATGTTACCAGCTATACAGAACATGCAAAAAGCGCTTGATGAAGCTTCTCTTGGTGGTAAAATTAGGGTTTCTACGGTTCATACGATGTCGGTTTTGAAAAACTCGGAGCCACCTTCTGCTGGAAGTTTTCATGATGAATATAGTACCGTTTTGCAGGGTTTGTTGTCGTTTAATAAGGATACTGGTTCCCCTTTTGCTATTAATCCTTATCCTTATTTTGCTTATAAAAGTGATCCTGGAAGGGCTGATAATTTGGCTTTTTGCCTTTTTCAACCTAATGCCGGTCGAGTTGATGCAAATACTAAGCTCAATTACATGAATATGTTTGATGCTCAGATTCTATGGCGGAGACAGGGTGGACCGAGTATTGAGAATGCAAAGGCTTACAATGGTAATCTGATTAAGCACCTGCGATCTAAGGTTGGGACACCACTGATGCCAGGGAAATCAGTGGACACATACATCTTTGCCTTGTATGATGAGGACTTGAAGCCTGGAGCTGGTTCTGAGAAAGCCTTCGGGCTTTACAACACTGATCAAACGATGATCTATGACGCTGGCCTCTCTAAGCAACAAAGCACTACTCCTACACCTACTAGTAGCCCCGTGGTATCTCCGATTAATCAAGATGTGTCAAAATCTCCTATGAATTCAACGCCAAAAGTTCCAAGTCCAACAACGCCGTATAATAGTAACATAGCATGGTGTGTGCCAAAAGCAGGATTAACTGATGTGCAACTACAAGCAAATTTGGATTATGCTTGTGGGCAGGGGATTGATTGTAGCTTAATCCAACCAGGAGGTGCTTGTTTTGAACCTAACACATTAGCTAACCATGCTGCATACGCCATGAATCTCTTCTATCACACTGTTGGGCAAAATCCATTAACTTGTGATTTTTCACAAACAGCTACACTAACATCAAATAACCCAAGTAAGTTCTCATGCGGTTTTTGTACGACATTTTTTTTGTTCCTATCTTACGATATCTGA

Protein sequence

>MsG0180000161.01.T01

LSKQNLTLVNLQVYPLMTCYIFPLLLLVLSAVSKSSQGKHDKNGFWLSSTLSRIQPCNLLLCAESDPFLGVNYGQVADNLPPASATAKLLQTTAFEKVRLYGTDPAIIKSLANTGIGIVIGAANGDIPSLASDPSFAKTWISTNVLPYYPASNIILITVGNEVITSNDTNLINGMLPAIQNMQKALDEASLGGKIRVSTVHTMSVLKNSEPPSAGSFHDEYSTVLQGLLSFNKDTGSPFAINPYPYFAYKSDPGRADNLAFCLFQPNAGRVDANTKLNYMNMFDAQILWRRQGGPSIENAKAYNGNLIKHLRSKVGTPLMPGKSVDTYIFALYDEDLKPGAGSEKAFGLYNTDQTMIYDAGLSKQQSTTPTPTSSPVVSPINQDVSKSPMNSTPKVPSPTTPYNSNIAWCVPKAGLTDVQLQANLDYACGQGIDCSLIQPGGACFEPNTLANHAAYAMNLFYHTVGQNPLTCDFSQTATLTSNNPSKFSCGFCTTFFLFLSYDI*