AlfalfaGEDB | MsG0780040459.01

M. sativa cultivar ZhongmuNo.1 / MsG0780040459.01

KEGG: -
GO: GO:0046983
PFAM: PF00010

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780040459.01.T01	XP_039683226.1	98.406	251	3	1	1	251	1	250	2.75E-180	505

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780040459.01.T01	O80674	62.1	219	77	5	18	233	10	225	5.02E-80	244

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780040459.01.T01	A0A396H4N2	98.406	251	3	1	1	251	1	250	1.31e-180	505

TFs/TRs:

Gene ID	Type	Classification
MsG0780040459.01.T01	TF	bHLH

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048797.01	MsG0780040459.01	0.834273	3.296815e-56	3.893275e-53
MsG0180000002.01	MsG0780040459.01	0.807207	5.656838e-50	3.131967e-47
MsG0180000161.01	MsG0780040459.01	0.821599	3.705844e-53	3.028389e-50
MsG0180000984.01	MsG0780040459.01	0.872310	3.508755e-67	1.461163e-63
MsG0180001288.01	MsG0780040459.01	0.852479	4.495120e-61	9.404640e-58
MsG0180001719.01	MsG0780040459.01	0.874016	9.389269e-68	4.160475e-64
MsG0180002428.01	MsG0780040459.01	0.809587	1.757802e-50	1.036209e-47
MsG0180003905.01	MsG0780040459.01	0.805409	1.353540e-49	7.155666e-47
MsG0180004120.01	MsG0780040459.01	0.824964	6.065855e-54	5.455152e-51
MsG0180004583.01	MsG0780040459.01	0.803550	3.304241e-49	1.665340e-46
MsG0180004710.01	MsG0780040459.01	0.827274	1.712377e-54	1.645324e-51
MsG0180004828.01	MsG0780040459.01	0.821288	4.372284e-53	3.542201e-50
MsG0180005127.01	MsG0780040459.01	0.801144	1.033995e-48	4.901730e-46
MsG0180005325.01	MsG0780040459.01	0.854394	1.267310e-61	2.826077e-58
MsG0180005621.01	MsG0780040459.01	0.895682	7.601121e-76	7.966593e-72
MsG0180005655.01	MsG0780040459.01	0.838786	2.338325e-57	3.165356e-54
MsG0180005678.01	MsG0780040459.01	0.842673	2.240099e-58	3.421274e-55
MsG0180005819.01	MsG0780040459.01	0.828738	7.609069e-55	7.628622e-52
MsG0180005898.01	MsG0780040459.01	-0.803692	3.087458e-49	1.561673e-46
MsG0180006183.01	MsG0780040459.01	0.875940	2.072941e-68	9.865951e-65
MsG0180006253.01	MsG0780040459.01	0.857408	1.665835e-62	4.107148e-59
MsG0780040459.01	MsG0780040554.01	0.871311	7.525200e-67	3.021920e-63
MsG0780040459.01	MsG0780040899.01	0.826535	2.571956e-54	2.418625e-51
MsG0780040459.01	MsG0780041008.01	0.802806	4.710514e-49	2.329308e-46
MsG0780040459.01	MsG0780041820.01	0.879550	1.137582e-69	6.192424e-66
MsG0780040459.01	MsG0780041823.01	0.815347	9.684679e-52	6.660466e-49
MsG0780040459.01	MsG0880042392.01	0.847434	1.159668e-59	2.061007e-56
MsG0780040459.01	MsG0880043920.01	0.833614	4.818862e-56	5.578588e-53
MsG0780040459.01	MsG0880044139.01	0.809904	1.502572e-50	8.931532e-48
MsG0780040459.01	MsG0880044834.01	-0.823186	1.586076e-53	1.355970e-50
MsG0780040459.01	MsG0880045356.01	0.823035	1.720086e-53	1.464404e-50
MsG0780040459.01	MsG0880045647.01	0.806225	9.120200e-50	4.923676e-47
MsG0780040459.01	MsG0880045725.01	0.805396	1.362389e-49	7.199810e-47
MsG0780040459.01	MsG0880045802.01	0.825523	4.474111e-54	4.087869e-51
MsG0780040459.01	MsG0880045879.01	0.831197	1.913590e-55	2.061692e-52
MsG0780040459.01	MsG0880046923.01	0.807408	5.130149e-50	2.855233e-47
MsG0780040459.01	MsG0880046992.01	0.813382	2.632809e-51	1.716778e-48
MsG0780040459.01	MsG0880047414.01	0.836958	6.895050e-57	8.826448e-54
MsG0780040459.01	MsG0880047450.01	0.803784	2.955125e-49	1.498294e-46
MsG0780040459.01	MsG0880047681.01	0.823721	1.188980e-53	1.032142e-50
MsG0280010617.01	MsG0780040459.01	0.845185	4.753683e-59	7.857569e-56
MsG0280010825.01	MsG0780040459.01	0.833359	5.581309e-56	6.412489e-53
MsG0280011271.01	MsG0780040459.01	0.825375	4.852129e-54	4.414505e-51
MsG0380011756.01	MsG0780040459.01	0.801063	1.074573e-48	5.083673e-46
MsG0380013341.01	MsG0780040459.01	0.802034	6.795438e-49	3.294559e-46
MsG0380013540.01	MsG0780040459.01	0.818656	1.749410e-52	1.317307e-49
MsG0380014542.01	MsG0780040459.01	0.875038	4.220452e-68	1.942717e-64
MsG0380014544.01	MsG0780040459.01	0.909499	5.322706e-82	1.038552e-77
MsG0680031356.01	MsG0780040459.01	0.872316	3.493580e-67	1.455155e-63
MsG0680033645.01	MsG0780040459.01	0.804386	2.214526e-49	1.140290e-46
MsG0480018875.01	MsG0780040459.01	0.847807	9.152553e-60	1.646025e-56
MsG0480019853.01	MsG0780040459.01	0.822344	2.491557e-53	2.079887e-50
MsG0480020398.01	MsG0780040459.01	0.820934	5.276314e-53	4.232963e-50
MsG0480020937.01	MsG0780040459.01	0.903163	4.606091e-79	6.733935e-75
MsG0480021100.01	MsG0780040459.01	0.838930	2.146470e-57	2.918359e-54
MsG0480021175.01	MsG0780040459.01	0.802253	6.125454e-49	2.986448e-46
MsG0480021436.01	MsG0780040459.01	0.826587	2.499996e-54	2.354361e-51
MsG0480021456.01	MsG0780040459.01	0.819904	9.089846e-53	7.086646e-50
MsG0480021486.01	MsG0780040459.01	0.839967	1.154063e-57	1.620142e-54
MsG0480021740.01	MsG0780040459.01	0.829881	4.015421e-55	4.163569e-52
MsG0480021773.01	MsG0780040459.01	0.874304	7.497067e-68	3.357606e-64
MsG0480021902.01	MsG0780040459.01	0.838340	3.047768e-57	4.069850e-54
MsG0480022242.01	MsG0780040459.01	-0.831276	1.830112e-55	1.976335e-52
MsG0480022244.01	MsG0780040459.01	-0.867956	9.334708e-66	3.318738e-62
MsG0480022307.01	MsG0780040459.01	0.853936	1.718652e-61	3.775457e-58
MsG0480022378.01	MsG0780040459.01	0.903155	4.643448e-79	6.786507e-75
MsG0480023414.01	MsG0780040459.01	0.823417	1.401161e-53	1.205591e-50
MsG0480023426.01	MsG0780040459.01	0.841497	4.583769e-58	6.747869e-55
MsG0480023532.01	MsG0780040459.01	0.800345	1.505618e-48	6.994199e-46
MsG0480023575.01	MsG0780040459.01	0.834974	2.196998e-56	2.649605e-53
MsG0480023626.01	MsG0780040459.01	0.814730	1.327525e-51	8.978110e-49
MsG0480023842.01	MsG0780040459.01	0.875164	3.823352e-68	1.767540e-64
MsG0480023913.01	MsG0780040459.01	0.854064	1.578382e-61	3.482578e-58
MsG0480024019.01	MsG0780040459.01	0.893951	3.893723e-75	3.792458e-71
MsG0580024276.01	MsG0780040459.01	0.870108	1.871368e-66	7.193260e-63
MsG0580025504.01	MsG0780040459.01	0.821307	4.328324e-53	3.508564e-50
MsG0580025970.01	MsG0780040459.01	0.838710	2.446791e-57	3.304807e-54
MsG0380015340.01	MsG0780040459.01	0.855007	8.418057e-62	1.915841e-58
MsG0380015393.01	MsG0780040459.01	0.819413	1.176884e-52	9.050024e-50
MsG0380015557.01	MsG0780040459.01	0.837451	5.158994e-57	6.704213e-54
MsG0380015656.01	MsG0780040459.01	0.859924	2.952461e-63	7.929443e-60
MsG0380015954.01	MsG0780040459.01	0.820571	6.391885e-53	5.076087e-50
MsG0380016250.01	MsG0780040459.01	0.820224	7.678764e-53	6.039904e-50
MsG0380016819.01	MsG0780040459.01	0.843412	1.423893e-58	2.226141e-55
MsG0380016936.01	MsG0780040459.01	-0.807767	4.304539e-50	2.418103e-47
MsG0380017380.01	MsG0780040459.01	0.817606	3.023000e-52	2.211611e-49
MsG0380017416.01	MsG0780040459.01	0.842648	2.273753e-58	3.469945e-55
MsG0380017666.01	MsG0780040459.01	0.847437	1.157182e-59	2.056733e-56
MsG0380017696.01	MsG0780040459.01	0.837441	5.189786e-57	6.742135e-54
MsG0480018111.01	MsG0780040459.01	0.818030	2.424667e-52	1.794574e-49
MsG0480018228.01	MsG0780040459.01	0.866343	3.055324e-65	1.026353e-61
MsG0480018362.01	MsG0780040459.01	0.818322	2.082778e-52	1.554030e-49
MsG0580027517.01	MsG0780040459.01	0.819847	9.366626e-53	7.290716e-50
MsG0580028890.01	MsG0780040459.01	0.801410	9.122196e-49	4.353355e-46
MsG0580028916.01	MsG0780040459.01	0.834788	2.447563e-56	2.934802e-53
MsG0580028927.01	MsG0780040459.01	0.800275	1.555433e-48	7.212663e-46
MsG0580028955.01	MsG0780040459.01	0.801895	7.254842e-49	3.505155e-46
MsG0580030141.01	MsG0780040459.01	0.890974	6.062043e-74	5.213799e-70
MsG0280006631.01	MsG0780040459.01	0.854021	1.623701e-61	3.577287e-58
MsG0280006666.01	MsG0780040459.01	0.874137	8.538801e-68	3.800444e-64
MsG0280006851.01	MsG0780040459.01	0.850798	1.345005e-60	2.666016e-57
MsG0280006909.01	MsG0780040459.01	0.846899	1.625514e-59	2.839540e-56
MsG0280006924.01	MsG0780040459.01	0.838510	2.755226e-57	3.698476e-54
MsG0280007280.01	MsG0780040459.01	0.807105	5.945343e-50	3.282748e-47
MsG0280007408.01	MsG0780040459.01	0.823006	1.747182e-53	1.486207e-50
MsG0280007423.01	MsG0780040459.01	-0.838783	2.342005e-57	3.170002e-54
MsG0280007544.01	MsG0780040459.01	0.811248	7.699477e-51	4.742096e-48
MsG0280007688.01	MsG0780040459.01	0.817545	3.119747e-52	2.278672e-49
MsG0280007695.01	MsG0780040459.01	0.868398	6.725890e-66	2.429206e-62
MsG0280009980.01	MsG0780040459.01	0.888472	5.730630e-73	4.445733e-69
MsG0780035917.01	MsG0780040459.01	0.872198	3.822957e-67	1.585500e-63
MsG0780036478.01	MsG0780040459.01	0.838148	3.414771e-57	4.532995e-54
MsG0780036553.01	MsG0780040459.01	0.804910	1.721364e-49	8.985209e-47
MsG0780036901.01	MsG0780040459.01	0.821214	4.547498e-53	3.676938e-50
MsG0780038647.01	MsG0780040459.01	0.838641	2.548812e-57	3.435336e-54
MsG0780038736.01	MsG0780040459.01	0.820388	7.042870e-53	5.565362e-50
MsG0780039536.01	MsG0780040459.01	0.865553	5.432629e-65	1.774859e-61

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780040459.01.T01	MTR_7g089400	87.200	125	15	1	1	125	1	124	1.56e-74	223
MsG0780040459.01.T01	MTR_1g093750	49.215	191	90	3	59	243	141	330	1.26e-47	161
MsG0780040459.01.T01	MTR_3g070970	35.317	252	137	6	14	243	7	254	4.18e-42	144
MsG0780040459.01.T01	MTR_2g091190	46.369	179	89	3	71	243	54	231	4.11e-34	123
MsG0780040459.01.T01	MTR_2g015890	38.636	176	99	3	71	241	62	233	5.92e-31	115
MsG0780040459.01.T01	MTR_4g079760	42.021	188	92	5	68	243	60	242	3.16e-28	108
MsG0780040459.01.T01	MTR_2g015890	41.880	117	64	1	71	187	62	174	9.89e-25	98.2
MsG0780040459.01.T01	MTR_5g066080	39.080	174	78	3	59	206	19	190	1.25e-23	96.3
MsG0780040459.01.T01	MTR_5g032375	32.093	215	118	6	32	233	7	206	5.36e-22	90.9
MsG0780040459.01.T01	MTR_4g087920	37.805	164	97	4	70	230	69	230	9.80e-22	91.7
MsG0780040459.01.T01	MTR_2g015890	34.058	138	82	3	109	241	2	135	1.80e-15	72.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780040459.01.T01	AT2G41130	62.100	219	77	5	18	233	10	225	5.12e-81	244
MsG0780040459.01.T01	AT3G56770	61.140	193	61	4	70	250	39	229	6.06e-73	222
MsG0780040459.01.T01	AT1G68810	45.729	199	96	3	57	243	151	349	2.17e-46	159
MsG0780040459.01.T01	AT3G25710	57.857	140	57	1	72	211	128	265	6.69e-44	151
MsG0780040459.01.T01	AT2G40200	41.579	190	94	4	71	245	58	245	8.11e-35	125
MsG0780040459.01.T01	AT4G38070	34.807	181	102	5	26	206	50	214	2.23e-22	92.8

Find 48 sgRNAs with CRISPR-Local

Find 90 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GACTGTTATTTCGTCGGTTT+CGG	0.235930	7:+77892597	None:intergenic
CAACAAATTCAGAATAATAT+TGG	0.249136	7:-77893988	MsG0780040459.01.T01:CDS
TTTCGATTAGGTCGGGAATT+AGG	0.256589	7:+77892497	None:intergenic
GTAATAGTTATTGTTGTTAT+CGG	0.378138	7:+77893855	None:intergenic
GAATTCACTCAGGTCTTTGT+TGG	0.378871	7:-77892347	MsG0780040459.01.T01:CDS
GAGACTTGAGGATTTCGATT+AGG	0.380801	7:+77892485	None:intergenic
AACAAATTCAGAATAATATT+GGG	0.385638	7:-77893987	MsG0780040459.01.T01:CDS
TGTTGCATCATAGTGCTACT+AGG	0.431842	7:+77893895	None:intergenic
GTCGAAAAGGCGTCGAGGGT+TGG	0.453710	7:-77892299	MsG0780040459.01.T01:CDS
GTTGAGTATTCAAAGAATGA+AGG	0.456323	7:+77893919	None:intergenic
GCTGAAATGGCCACACTTGG+TGG	0.460387	7:-77892442	MsG0780040459.01.T01:CDS
CACTCAGGTCTTTGTTGGAT+AGG	0.462227	7:-77892342	MsG0780040459.01.T01:CDS
AGGAAGCTGAGAAGAGAAGA+AGG	0.471315	7:-77893756	MsG0780040459.01.T01:CDS
GGCAATGACATCTCCGACGA+AGG	0.483297	7:-77892565	MsG0780040459.01.T01:CDS
GTTATTTCGTCGGTTTCGGA+TGG	0.483862	7:+77892601	None:intergenic
GTAATTTCAGAAACTTCAAA+GGG	0.483898	7:+77893829	None:intergenic
TTGAGGATTTCGATTAGGTC+GGG	0.493776	7:+77892490	None:intergenic
AGTAATTTCAGAAACTTCAA+AGG	0.496460	7:+77893828	None:intergenic
CTTGAGGATTTCGATTAGGT+CGG	0.504746	7:+77892489	None:intergenic
CCTTGGAGTTGCAAGGGAGA+AGG	0.512266	7:+77893698	None:intergenic
CTTGGAGTTGCAAGGGAGAA+GGG	0.521866	7:+77893699	None:intergenic
TTCGTCGGAGATGTCATTGC+CGG	0.522101	7:+77892567	None:intergenic
TTGAGTATTCAAAGAATGAA+GGG	0.546799	7:+77893920	None:intergenic
CCTTCTCCCTTGCAACTCCA+AGG	0.549041	7:-77893698	MsG0780040459.01.T01:intron
ATAATAACCTTGGAGTTGCA+AGG	0.549750	7:+77893691	None:intergenic
AGAGCTGAAATGGCCACACT+TGG	0.551920	7:-77892445	MsG0780040459.01.T01:CDS
TCTTTGTTGGATAGGTCTAG+TGG	0.556474	7:-77892334	MsG0780040459.01.T01:CDS
AGATATGACTGTTATTTCGT+CGG	0.558305	7:+77892591	None:intergenic
GGTCTAGTGGTTGTAACGAT+AGG	0.565435	7:-77892321	MsG0780040459.01.T01:CDS
TAATAACCTTGGAGTTGCAA+GGG	0.573577	7:+77893692	None:intergenic
AAGGGAGAAGGGTACGAAGA+TGG	0.575464	7:+77893710	None:intergenic
ACGTGTTCTTCCACCAAGTG+TGG	0.575747	7:+77892432	None:intergenic
GAATATGAGTCTGCCTTCGT+CGG	0.576237	7:+77892552	None:intergenic
ATAGGTCGAAAAGGCGTCGA+GGG	0.576982	7:-77892303	MsG0780040459.01.T01:CDS
AGAGCTCTATCTTGCTGAGA+GGG	0.579252	7:+77893799	None:intergenic
GTTGTAACGATAGGTCGAAA+AGG	0.580273	7:-77892312	MsG0780040459.01.T01:CDS
AATTCAGAATAATATTGGGA+TGG	0.586813	7:-77893983	MsG0780040459.01.T01:CDS
TTTCAGAAACTTCAAAGGGG+TGG	0.587837	7:+77893833	None:intergenic
GAAATAACAGTCATATCTGC+CGG	0.595239	7:-77892586	MsG0780040459.01.T01:CDS
GGAAGCTGAGAAGAGAAGAA+GGG	0.604105	7:-77893755	MsG0780040459.01.T01:CDS
GATTAGGTCGGGAATTAGGT+CGG	0.607145	7:+77892501	None:intergenic
GAAGGGTACGAAGATGGTCA+AGG	0.633890	7:+77893716	None:intergenic
AGCTGCTTTGAAGAATCACA+AGG	0.645458	7:-77893776	MsG0780040459.01.T01:CDS
TAGAGCTCTATCTTGCTGAG+AGG	0.647696	7:+77893798	None:intergenic
ATGAAGGGTTGTTAGCAACA+AGG	0.651347	7:+77893935	None:intergenic
GATAGGTCGAAAAGGCGTCG+AGG	0.658588	7:-77892304	MsG0780040459.01.T01:CDS
TGATTGATTTCAGACAGACA+AGG	0.674472	7:-77892704	MsG0780040459.01.T01:intron
TAATTTCAGAAACTTCAAAG+GGG	0.757536	7:+77893830	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AACAAATTCAGAATAATATT+GGG	-	Chr7:77892289-77892308	MsG0780040459.01.T01:CDS	15.0%
!!	AATGATGAAAATAATAACCT+TGG	+	Chr7:77892598-77892617	None:intergenic	20.0%
!!	AATTATTTGCAAATTAAGCT+AGG	-	Chr7:77893159-77893178	MsG0780040459.01.T01:intron	20.0%
!!	ATTATTTGCAAATTAAGCTA+GGG	-	Chr7:77893160-77893179	MsG0780040459.01.T01:intron	20.0%
!!	CAACAAATTCAGAATAATAT+TGG	-	Chr7:77892288-77892307	MsG0780040459.01.T01:CDS	20.0%
!!	GATGTTCCAAAAAATAATTA+AGG	+	Chr7:77892940-77892959	None:intergenic	20.0%
!!	TCATTGTTAATTATTTGTCT+TGG	-	Chr7:77892613-77892632	MsG0780040459.01.T01:CDS	20.0%
!!!	CTAGATCCTTAATTATTTTT+TGG	-	Chr7:77892931-77892950	MsG0780040459.01.T01:intron	20.0%
!!!	GCTTAATTTGCAAATAATTT+TGG	+	Chr7:77893158-77893177	None:intergenic	20.0%
!!!	GTAATAGTTATTGTTGTTAT+CGG	+	Chr7:77892424-77892443	None:intergenic	20.0%
!!!	TTGGATTACATATTTTTTGT+AGG	+	Chr7:77893089-77893108	None:intergenic	20.0%
!	AATTCAGAATAATATTGGGA+TGG	-	Chr7:77892293-77892312	MsG0780040459.01.T01:CDS	25.0%
!	AGTAATTTCAGAAACTTCAA+AGG	+	Chr7:77892451-77892470	None:intergenic	25.0%
!	CTTAATTACTAAAGTGAGAA+AGG	+	Chr7:77892829-77892848	None:intergenic	25.0%
!	GTAATTTCAGAAACTTCAAA+GGG	+	Chr7:77892450-77892469	None:intergenic	25.0%
!	TAATTTCAGAAACTTCAAAG+GGG	+	Chr7:77892449-77892468	None:intergenic	25.0%
!	TAGTCATGTATAAAACTTGA+TGG	+	Chr7:77893249-77893268	None:intergenic	25.0%
!	TTGAGTATTCAAAGAATGAA+GGG	+	Chr7:77892359-77892378	None:intergenic	25.0%
!!	TACATGTTTTCACTCTATTT+TGG	+	Chr7:77892775-77892794	None:intergenic	25.0%
!!	TCAATTTTACAAAACCTACA+AGG	-	Chr7:77893367-77893386	MsG0780040459.01.T01:intron	25.0%
!!	TTTTGTTCTTTTGTTCTCAA+AGG	-	Chr7:77892673-77892692	MsG0780040459.01.T01:CDS	25.0%
!!!	TTGTAGGTTTTGTAAAATTG+AGG	+	Chr7:77893368-77893387	None:intergenic	25.0%
	AAACCATTGTGATTTAGAAG+AGG	+	Chr7:77893395-77893414	None:intergenic	30.0%
	GTTGAGTATTCAAAGAATGA+AGG	+	Chr7:77892360-77892379	None:intergenic	30.0%
	TGATGAGTGATTAAGTTCAT+TGG	+	Chr7:77893108-77893127	None:intergenic	30.0%
!	ATTTTCTTCAGAATTCACTC+AGG	-	Chr7:77893919-77893938	MsG0780040459.01.T01:CDS	30.0%
!	CTTTAGTAATTAAGTTGCCA+TGG	-	Chr7:77892835-77892854	MsG0780040459.01.T01:intron	30.0%
!!	AGATATGACTGTTATTTCGT+CGG	+	Chr7:77893688-77893707	None:intergenic	30.0%
!!	TCATTTTTGTCTCAAAACCT+AGG	+	Chr7:77893472-77893491	None:intergenic	30.0%
!!	TGTTTTCACTCTATTTTGGA+TGG	+	Chr7:77892771-77892790	None:intergenic	30.0%
	AAAAACTCTCAGAGCTGAAA+TGG	-	Chr7:77893821-77893840	MsG0780040459.01.T01:CDS	35.0%
	ACACACACAATTATCTTTGC+TGG	+	Chr7:77892714-77892733	None:intergenic	35.0%
	ATAATAACCTTGGAGTTGCA+AGG	+	Chr7:77892588-77892607	None:intergenic	35.0%
	CTAGTACATGTTTGCATATG+TGG	+	Chr7:77893430-77893449	None:intergenic	35.0%
	GAAATAACAGTCATATCTGC+CGG	-	Chr7:77893690-77893709	MsG0780040459.01.T01:intron	35.0%
	TAATAACCTTGGAGTTGCAA+GGG	+	Chr7:77892587-77892606	None:intergenic	35.0%
	TCAATCTTGTCACAAAACCT+AGG	+	Chr7:77893509-77893528	None:intergenic	35.0%
	TCTTATGAGTTTAGCACAAG+TGG	-	Chr7:77893004-77893023	MsG0780040459.01.T01:intron	35.0%
	TGATGAAGAAAGCAAAACCT+AGG	-	Chr7:77893489-77893508	MsG0780040459.01.T01:intron	35.0%
!	AGGCATATTTTCACTCATTC+TGG	+	Chr7:77892809-77892828	None:intergenic	35.0%
!	AGTATCGAACTCAAAACATC+CGG	+	Chr7:77893064-77893083	None:intergenic	35.0%
!	GTAAAGTACTACATGTTCCA+TGG	+	Chr7:77892855-77892874	None:intergenic	35.0%
!	TGATTGATTTCAGACAGACA+AGG	-	Chr7:77893572-77893591	MsG0780040459.01.T01:intron	35.0%
!!!	TTTCAGCTCTGAGAGTTTTT+AGG	+	Chr7:77893821-77893840	None:intergenic	35.0%
!!!	TTTTTAGGTGAAGAGACTTG+AGG	+	Chr7:77893806-77893825	None:intergenic	35.0%
	ATGAAGGGTTGTTAGCAACA+AGG	+	Chr7:77892344-77892363	None:intergenic	40.0%
	ATGAGTTTAGCACAAGTGGT+CGG	-	Chr7:77893008-77893027	MsG0780040459.01.T01:intron	40.0%
	ATTTAGAAGAGGCTCCTTGT+AGG	+	Chr7:77893384-77893403	None:intergenic	40.0%
	CTTGAGGATTTCGATTAGGT+CGG	+	Chr7:77893790-77893809	None:intergenic	40.0%
	GAATTCACTCAGGTCTTTGT+TGG	-	Chr7:77893929-77893948	MsG0780040459.01.T01:CDS	40.0%
	GAGACTTGAGGATTTCGATT+AGG	+	Chr7:77893794-77893813	None:intergenic	40.0%
	GAGCCTCTTCTAAATCACAA+TGG	-	Chr7:77893389-77893408	MsG0780040459.01.T01:intron	40.0%
	GTTGTAACGATAGGTCGAAA+AGG	-	Chr7:77893964-77893983	MsG0780040459.01.T01:CDS	40.0%
	TCTTTGTTGGATAGGTCTAG+TGG	-	Chr7:77893942-77893961	MsG0780040459.01.T01:CDS	40.0%
	TGATGAAGAAAGCAAAGCCT+AGG	-	Chr7:77893452-77893471	MsG0780040459.01.T01:intron	40.0%
	TTAAGCTAGGGAAGTCACTT+AGG	-	Chr7:77893172-77893191	MsG0780040459.01.T01:intron	40.0%
	TTGAGGATTTCGATTAGGTC+GGG	+	Chr7:77893789-77893808	None:intergenic	40.0%
	TTTCAGAAACTTCAAAGGGG+TGG	+	Chr7:77892446-77892465	None:intergenic	40.0%
	TTTCGATTAGGTCGGGAATT+AGG	+	Chr7:77893782-77893801	None:intergenic	40.0%
!	AGGGAAGTCACTTAGGTTTT+AGG	-	Chr7:77893179-77893198	MsG0780040459.01.T01:intron	40.0%
!	TAGCTTTTGCAAAATCGTGG+TGG	+	Chr7:77893340-77893359	None:intergenic	40.0%
!	TCGTAGCTTTTGCAAAATCG+TGG	+	Chr7:77893343-77893362	None:intergenic	40.0%
!	TGTCTGAAGTGGTGTATATC+CGG	-	Chr7:77893042-77893061	MsG0780040459.01.T01:intron	40.0%
!	TGTTGCATCATAGTGCTACT+AGG	+	Chr7:77892384-77892403	None:intergenic	40.0%
!!	AGCTGCTTTGAAGAATCACA+AGG	-	Chr7:77892500-77892519	MsG0780040459.01.T01:CDS	40.0%
!!	GACTGTTATTTCGTCGGTTT+CGG	+	Chr7:77893682-77893701	None:intergenic	40.0%
	AGAGCTCTATCTTGCTGAGA+GGG	+	Chr7:77892480-77892499	None:intergenic	45.0%
	AGGAAGCTGAGAAGAGAAGA+AGG	-	Chr7:77892520-77892539	MsG0780040459.01.T01:CDS	45.0%
	CACTCAGGTCTTTGTTGGAT+AGG	-	Chr7:77893934-77893953	MsG0780040459.01.T01:CDS	45.0%
	GAATATGAGTCTGCCTTCGT+CGG	+	Chr7:77893727-77893746	None:intergenic	45.0%
	GATTAGGTCGGGAATTAGGT+CGG	+	Chr7:77893778-77893797	None:intergenic	45.0%
	GGAAGCTGAGAAGAGAAGAA+GGG	-	Chr7:77892521-77892540	MsG0780040459.01.T01:CDS	45.0%
	GGTCTAGTGGTTGTAACGAT+AGG	-	Chr7:77893955-77893974	MsG0780040459.01.T01:CDS	45.0%
	TAGAGCTCTATCTTGCTGAG+AGG	+	Chr7:77892481-77892500	None:intergenic	45.0%
	TGCGTAATGTGTGTCTGAAG+TGG	-	Chr7:77893031-77893050	MsG0780040459.01.T01:intron	45.0%
!!	GTTATTTCGTCGGTTTCGGA+TGG	+	Chr7:77893678-77893697	None:intergenic	45.0%
!!!	TTTTATTTTTTTACTATTTA+AGG	+	Chr7:77893135-77893154	None:intergenic	5.0%
	ACGTGTTCTTCCACCAAGTG+TGG	+	Chr7:77893847-77893866	None:intergenic	50.0%
	AGAGCTGAAATGGCCACACT+TGG	-	Chr7:77893831-77893850	MsG0780040459.01.T01:CDS	50.0%
	CTTGGAGTTGCAAGGGAGAA+GGG	+	Chr7:77892580-77892599	None:intergenic	50.0%
	TTCGTCGGAGATGTCATTGC+CGG	+	Chr7:77893712-77893731	None:intergenic	50.0%
!	AAGGGAGAAGGGTACGAAGA+TGG	+	Chr7:77892569-77892588	None:intergenic	50.0%
!	GAAGGGTACGAAGATGGTCA+AGG	+	Chr7:77892563-77892582	None:intergenic	50.0%
!!	ATAGGTCGAAAAGGCGTCGA+GGG	-	Chr7:77893973-77893992	MsG0780040459.01.T01:CDS	50.0%
	CCTTCTCCCTTGCAACTCCA+AGG	-	Chr7:77892578-77892597	MsG0780040459.01.T01:CDS	55.0%
	CCTTGGAGTTGCAAGGGAGA+AGG	+	Chr7:77892581-77892600	None:intergenic	55.0%
	GCTGAAATGGCCACACTTGG+TGG	-	Chr7:77893834-77893853	MsG0780040459.01.T01:CDS	55.0%
	GGCAATGACATCTCCGACGA+AGG	-	Chr7:77893711-77893730	MsG0780040459.01.T01:CDS	55.0%
!!	GATAGGTCGAAAAGGCGTCG+AGG	-	Chr7:77893972-77893991	MsG0780040459.01.T01:CDS	55.0%
!!	GTCGAAAAGGCGTCGAGGGT+TGG	-	Chr7:77893977-77893996	MsG0780040459.01.T01:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr7	gene	77892279	77894019	77892279	ID=MsG0780040459.01;Name=MsG0780040459.01
Chr7	mRNA	77892279	77894019	77892279	ID=MsG0780040459.01.T01;Parent=MsG0780040459.01;Name=MsG0780040459.01.T01;_AED=0.34;_eAED=0.34;_QI=0\|0\|0\|1\|1\|1\|2\|0\|251
Chr7	exon	77893699	77894019	77893699	ID=MsG0780040459.01.T01:exon:15016;Parent=MsG0780040459.01.T01
Chr7	exon	77892279	77892713	77892279	ID=MsG0780040459.01.T01:exon:15015;Parent=MsG0780040459.01.T01
Chr7	CDS	77893699	77894019	77893699	ID=MsG0780040459.01.T01:cds;Parent=MsG0780040459.01.T01
Chr7	CDS	77892279	77892713	77892279	ID=MsG0780040459.01.T01:cds;Parent=MsG0780040459.01.T01

Gene Sequence

>MsG0780040459.01.T01

ATGCTTCAGCAACAAATTCAGAATAATATTGGGATGGAAAACAACTCTGAACTCTTTCAATTCCTTGTTGCTAACAACCCTTCATTCTTTGAATACTCAACACCTAGTAGCACTATGATGCAACAAAGTTTCTGCAGTTCTTCCGATAACAACAATAACTATTACCACCCCTTTGAAGTTTCTGAAATTACTGATACACCCTCTCAGCAAGATAGAGCTCTAGCTGCTTTGAAGAATCACAAGGAAGCTGAGAAGAGAAGAAGGGAAAGAATTAACTCTCACCTTGACCATCTTCGTACCCTTCTCCCTTGCAACTCCAAGACAGACAAGGCTTCACTTCTAGCAAAAGTAGTAGAACGTGTGAAAGAATTAAAGCAACAAACATCTCAAATCACACAACTCGAAACTGTTCCATCCGAAACCGACGAAATAACAGTCATATCTGCCGGCAATGACATCTCCGACGAAGGCAGACTCATATTCAAAGCTTCATTATGCTGCGAAGATCGCTCCGACCTAATTCCCGACCTAATCGAAATCCTCAAGTCTCTTCACCTAAAAACTCTCAGAGCTGAAATGGCCACACTTGGTGGAAGAACACGTAACGTTCTTGTTGTTGCTGCTGAGAAAGAACATAATAGCATTGAATCTATTCATTTTCTTCAGAATTCACTCAGGTCTTTGTTGGATAGGTCTAGTGGTTGTAACGATAGGTCGAAAAGGCGTCGAGGGTTGGATAGAAGAATGATGCCTTAA

Protein sequence

>MsG0780040459.01.T01

MLQQQIQNNIGMENNSELFQFLVANNPSFFEYSTPSSTMMQQSFCSSSDNNNNYYHPFEVSEITDTPSQQDRALAALKNHKEAEKRRRERINSHLDHLRTLLPCNSKTDKASLLAKVVERVKELKQQTSQITQLETVPSETDEITVISAGNDISDEGRLIFKASLCCEDRSDLIPDLIEILKSLHLKTLRAEMATLGGRTRNVLVVAAEKEHNSIESIHFLQNSLRSLLDRSSGCNDRSKRRRGLDRRMMP*