AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000553.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000553.01.T01 MTR_1g014250 71.941 474 54 5 1 395 1 474 0.0 634
MsG0180000553.01.T01 MTR_1g014250 86.246 349 6 2 89 395 3 351 0.0 579
MsG0180000553.01.T01 MTR_1g014220 38.961 385 141 4 47 386 84 419 2.05e-83 263
MsG0180000553.01.T01 MTR_5g007060 80.198 101 5 1 239 339 182 267 3.26e-43 152
MsG0180000553.01.T01 MTR_3g051190 33.854 192 120 2 199 383 297 488 1.54e-25 108
MsG0180000553.01.T01 MTR_3g008470 26.216 370 223 5 67 388 153 520 3.47e-19 90.1
MsG0180000553.01.T01 MTR_2g031810 25.938 320 184 9 102 375 29 341 2.06e-13 71.6
MsG0180000553.01.T01 MTR_1g103530 26.909 275 147 7 67 291 164 434 5.77e-12 68.2
MsG0180000553.01.T01 MTR_1g103540 45.312 64 35 0 305 368 22 85 7.51e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000553.01.T01 AT5G25050 61.308 367 100 3 67 391 99 465 1.23e-153 444
MsG0180000553.01.T01 AT1G79710 56.117 376 122 4 67 400 103 477 2.70e-141 413
MsG0180000553.01.T01 AT1G79710 56.117 376 122 4 67 400 103 477 2.70e-141 413
MsG0180000553.01.T01 AT5G25040 57.182 369 119 4 67 396 100 468 3.43e-141 412
MsG0180000553.01.T01 AT5G25040 53.553 394 119 4 67 396 100 493 8.20e-138 405
MsG0180000553.01.T01 AT5G25040 57.321 321 98 4 115 396 1 321 1.73e-120 354
MsG0180000553.01.T01 AT5G25040 57.055 326 101 4 67 353 100 425 1.84e-119 356
MsG0180000553.01.T01 AT5G10820 46.335 382 148 6 67 395 111 488 6.03e-106 323
MsG0180000553.01.T01 AT1G79710 54.392 296 93 3 67 320 103 398 2.87e-103 312
MsG0180000553.01.T01 AT5G25040 54.122 279 89 4 67 306 100 378 7.15e-94 288
MsG0180000553.01.T01 AT2G32040 29.679 374 207 9 67 388 47 416 2.61e-25 107
MsG0180000553.01.T01 AT2G32040 29.096 354 195 9 67 368 178 527 1.49e-24 106
MsG0180000553.01.T01 AT5G54860 29.245 212 143 2 179 383 272 483 1.13e-23 103
MsG0180000553.01.T01 AT1G04570 26.503 366 219 8 67 386 139 500 1.76e-21 97.1
MsG0180000553.01.T01 AT1G04570 30.244 205 132 4 191 386 150 352 3.19e-21 95.1
MsG0180000553.01.T01 AT2G33280 25.729 377 214 11 67 387 28 394 2.59e-20 92.8
MsG0180000553.01.T01 AT2G33280 25.798 376 213 11 67 386 136 501 3.51e-20 93.2
MsG0180000553.01.T01 AT2G33280 28.636 220 142 5 176 386 106 319 3.43e-18 85.9

Find 82 sgRNAs with CRISPR-Local

Find 304 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATCTTGTGTTGGCAATTT+TGG 0.063315 1:-7716357 MsG0180000553.01.T01:CDS
CTTGGATTGTTAAGCCTTTA+TGG 0.127209 1:-7717601 MsG0180000553.01.T01:CDS
TCTTCTATTGGTGCACTATT+AGG 0.233671 1:-7716212 MsG0180000553.01.T01:CDS
TTGGATTGTTAAGCCTTTAT+GGG 0.242020 1:-7717600 MsG0180000553.01.T01:CDS
TTGATGGTTGCAGGTTTATT+AGG 0.248071 1:-7716419 MsG0180000553.01.T01:intron
GAACAAAGTTTGATAATCTT+TGG 0.261678 1:-7713826 MsG0180000553.01.T01:CDS
CAGCTCAGTCGGTTCCCTTT+AGG 0.266918 1:-7714190 MsG0180000553.01.T01:CDS
GGCATCTTTGTTCACCTTAT+AGG 0.269657 1:-7716176 MsG0180000553.01.T01:CDS
CAGTTGCTCTATGGTCTATC+AGG 0.276942 1:-7714106 MsG0180000553.01.T01:CDS
AGTCAAAGGGTGTTAGAATA+TGG 0.282434 1:-7717829 MsG0180000553.01.T01:CDS
TGTGCCTTTAGTTCTTCTAT+TGG 0.305955 1:-7716224 MsG0180000553.01.T01:CDS
TGCCGGCATCCACAAAGTTT+TGG 0.309039 1:+7715681 None:intergenic
GGCTAACCATAGGGCCTATA+AGG 0.323121 1:+7716162 None:intergenic
AAGATTATCAAACTTTGTTC+TGG 0.328960 1:+7713829 None:intergenic
GGAAGAAGAATGAAAGAGTT+AGG 0.330002 1:+7713731 None:intergenic
CATTCAGAGACTTACTCTTT+TGG 0.332958 1:-7714132 MsG0180000553.01.T01:CDS
AATCCGGTATACCAAACTTT+AGG 0.344820 1:+7714050 None:intergenic
AGCTCAAAGCTTTGTCCATC+TGG 0.346803 1:-7713953 MsG0180000553.01.T01:CDS
CTGGACTTCTTTCATCATCA+TGG 0.374263 1:-7713886 MsG0180000553.01.T01:CDS
GCCTTAACAGCAGGGAGTGC+TGG 0.387976 1:-7716335 MsG0180000553.01.T01:CDS
TGTAGTCCACATAGCCTTGC+CGG 0.387979 1:+7715664 None:intergenic
CTTTGTCCATCTGGTATTGA+AGG 0.389296 1:-7713944 MsG0180000553.01.T01:CDS
AGAAACCAAGGATGTTGAAT+TGG 0.391325 1:-7713667 MsG0180000553.01.T01:CDS
CTGGAATTACATCTATTCCT+TGG 0.397255 1:-7717619 MsG0180000553.01.T01:CDS
ATGAGATTGAACCTAAAGTT+TGG 0.398436 1:-7714061 MsG0180000553.01.T01:CDS
TCCAGCACTCCCTGCTGTTA+AGG 0.406873 1:+7716334 None:intergenic
ACCAATAAAACATTCCTTCA+AGG 0.408629 1:+7715573 None:intergenic
TGGACTTCTTTCATCATCAT+GGG 0.415817 1:-7713885 MsG0180000553.01.T01:CDS
GGTATAATATTGCTCCTAAA+GGG 0.420163 1:+7714176 None:intergenic
CTATTAGGATTCTCTATTAG+TGG 0.425299 1:-7716197 MsG0180000553.01.T01:CDS
CTAGGTGCACCAAAACTTTG+TGG 0.428219 1:-7715690 MsG0180000553.01.T01:intron
CGTAATCCTTTAGAGCGTAT+TGG 0.433360 1:+7714155 None:intergenic
CTGAGTTTGAATATCCTTGA+AGG 0.437719 1:-7715587 MsG0180000553.01.T01:CDS
TCAAATACCTGTGAGAAAGA+TGG 0.438222 1:+7715530 None:intergenic
TGGTATAATATTGCTCCTAA+AGG 0.438414 1:+7714175 None:intergenic
CATCAGTAAGAAGCCCATAA+AGG 0.450428 1:+7717587 None:intergenic
TGTTCACCTTATAGGCCCTA+TGG 0.452835 1:-7716168 MsG0180000553.01.T01:intron
CTTTCATCATCATGGGGTGG+TGG 0.454756 1:-7713878 MsG0180000553.01.T01:CDS
AGACACCAATTCAACATCCT+TGG 0.456982 1:+7713662 None:intergenic
ATCACAACAAAGACGTAATC+CGG 0.462520 1:+7714034 None:intergenic
CACCAAAACTTTGTGGATGC+CGG 0.471200 1:-7715683 MsG0180000553.01.T01:CDS
GAACCTAAAGTTTGGTATAC+CGG 0.482350 1:-7714053 MsG0180000553.01.T01:CDS
ATTATACCAATACGCTCTAA+AGG 0.485902 1:-7714161 MsG0180000553.01.T01:CDS
TGCTATCAAGAGAAATGCAT+TGG 0.489196 1:-7717772 MsG0180000553.01.T01:CDS
CAAATACCTGTGAGAAAGAT+GGG 0.493656 1:+7715531 None:intergenic
CATTGAAGAATCAAGATGTA+TGG 0.496871 1:-7715643 MsG0180000553.01.T01:CDS
TCTCTTGTACACAGTGTTGA+TGG 0.499772 1:-7713642 MsG0180000553.01.T01:intron
CTGTGCAACACATGCATCAA+TGG 0.501476 1:+7716292 None:intergenic
CAAAGAAAATGTGGATTCAA+AGG 0.503886 1:-7713709 MsG0180000553.01.T01:CDS
TTCTTCTTCCAAAGAAAATG+TGG 0.505364 1:-7713718 MsG0180000553.01.T01:CDS
TCTGAAGCACAGGTTTATGC+TGG 0.507686 1:-7717638 MsG0180000553.01.T01:intron
TGTCAGAAGCAAGGGAAGGA+TGG 0.513050 1:+7716258 None:intergenic
AAATGAAGAAAGAAAGTCAA+AGG 0.529642 1:-7717843 MsG0180000553.01.T01:CDS
GTCAGAAGCAAGGGAAGGAT+GGG 0.531751 1:+7716259 None:intergenic
AAATTGCCAACACAAGATGA+AGG 0.535053 1:+7716360 None:intergenic
TGCACCAATAGAAGAACTAA+AGG 0.537673 1:+7716220 None:intergenic
AACTTTGCATGTCAGAAGCA+AGG 0.539901 1:+7716249 None:intergenic
AAATGACTAGTAGACTAAAG+TGG 0.544535 1:-7713994 MsG0180000553.01.T01:CDS
TGAAAACCTTCATCTTGTGT+TGG 0.550037 1:-7716366 MsG0180000553.01.T01:CDS
CTAATGTCAATTGATAATGC+TGG 0.554898 1:-7713905 MsG0180000553.01.T01:CDS
AATGAAGAAAGAAAGTCAAA+GGG 0.555190 1:-7717842 MsG0180000553.01.T01:CDS
CATAAAGGCTTAACAATCCA+AGG 0.555428 1:+7717602 None:intergenic
CTTCTTTCATCATCATGGGG+TGG 0.567293 1:-7713881 MsG0180000553.01.T01:CDS
GGACTTCTTTCATCATCATG+GGG 0.573124 1:-7713884 MsG0180000553.01.T01:CDS
ACTTTGCATGTCAGAAGCAA+GGG 0.576270 1:+7716250 None:intergenic
AAACTTTGTGGATGCCGGCA+AGG 0.577788 1:-7715678 MsG0180000553.01.T01:CDS
GATATTCAAACTCAGTGCAA+AGG 0.582025 1:+7715595 None:intergenic
TTATTGGTATACAGACTCAA+AGG 0.588010 1:-7715558 MsG0180000553.01.T01:CDS
ATGGAAAGATAACAAAAGCA+TGG 0.598685 1:+7716388 None:intergenic
AACAGCAGGGAGTGCTGGAG+TGG 0.601674 1:-7716330 MsG0180000553.01.T01:CDS
GGATGGCCCATCTTTCTCAC+AGG 0.602106 1:-7715537 MsG0180000553.01.T01:intron
AATGTTCCTTCAATACCAGA+TGG 0.602463 1:+7713938 None:intergenic
AAAGAGTTAGGATCAACTCT+AGG 0.610731 1:+7713743 None:intergenic
TGGTATACAGACTCAAAGGA+TGG 0.620432 1:-7715554 MsG0180000553.01.T01:CDS
AGAAAATGTGGATTCAAAGG+TGG 0.627950 1:-7713706 MsG0180000553.01.T01:CDS
TTTGAGCTGAGTACAAGCAT+AGG 0.628993 1:+7713968 None:intergenic
AGTTGCTCTATGGTCTATCA+GGG 0.638082 1:-7714105 MsG0180000553.01.T01:CDS
TATTGACACTTCAGAAACCA+AGG 0.638956 1:-7713679 MsG0180000553.01.T01:CDS
TGGATGCCGGCAAGGCTATG+TGG 0.641291 1:-7715670 MsG0180000553.01.T01:CDS
TGAAGAATCAAGATGTATGG+AGG 0.648173 1:-7715640 MsG0180000553.01.T01:CDS
TGCATGTCAGAAGCAAGGGA+AGG 0.650191 1:+7716254 None:intergenic
GATAAGTACATGTATAGACA+AGG 0.690907 1:+7715617 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTCAATATTTTTTTTGTT+AGG - Chr1:7717884-7717903 MsG0180000553.01.T01:CDS 10.0%
!!! TTTCAATATTTTTTTTGTTA+GGG - Chr1:7717885-7717904 MsG0180000553.01.T01:CDS 10.0%
!! TAGCAATAGTTTATATAATT+TGG - Chr1:7717110-7717129 MsG0180000553.01.T01:intron 15.0%
!!! GTATGATATTTTTTACTTTT+TGG - Chr1:7716661-7716680 MsG0180000553.01.T01:intron 15.0%
!! AAGCTCGATATATTAAAATT+CGG - Chr1:7714182-7714201 MsG0180000553.01.T01:CDS 20.0%
!! ATATTTATAGATAAGTTCAC+TGG - Chr1:7716579-7716598 MsG0180000553.01.T01:intron 20.0%
!! ATTAGGGAAGTTAAAAATTA+AGG - Chr1:7716712-7716731 MsG0180000553.01.T01:intron 20.0%
!! ATTATATGTGTTTCTTATAG+TGG - Chr1:7714907-7714926 MsG0180000553.01.T01:intron 20.0%
!! CTTGATGTTTATCAAATTAA+AGG - Chr1:7714097-7714116 MsG0180000553.01.T01:CDS 20.0%
!! GTTTAAAAAATTACTAAGCA+TGG + Chr1:7717086-7717105 None:intergenic 20.0%
!! TATAGCATCATATATATTTG+TGG - Chr1:7716817-7716836 MsG0180000553.01.T01:intron 20.0%
!!! TAAGTTTTTTCATTCAACTA+GGG + Chr1:7717136-7717155 None:intergenic 20.0%
!!! TATTGAAATAAATATTGGCT+TGG + Chr1:7717873-7717892 None:intergenic 20.0%
!!! TGATAGATTTTTTTCTCATA+GGG - Chr1:7715400-7715419 MsG0180000553.01.T01:intron 20.0%
!!! TTAATTTGATAAACATCAAG+AGG + Chr1:7714097-7714116 None:intergenic 20.0%
! AAAAGTAATAGTTATGAGCA+GGG + Chr1:7714518-7714537 None:intergenic 25.0%
! AAATGAAGAAAGAAAGTCAA+AGG - Chr1:7713614-7713633 MsG0180000553.01.T01:intron 25.0%
! AAGATTATCAAACTTTGTTC+TGG + Chr1:7717631-7717650 None:intergenic 25.0%
! AATGAAGAAAGAAAGTCAAA+GGG - Chr1:7713615-7713634 MsG0180000553.01.T01:intron 25.0%
! AGAATTTCATGAAGTTAGAT+TGG + Chr1:7716065-7716084 None:intergenic 25.0%
! AGCTCGATATATTAAAATTC+GGG - Chr1:7714183-7714202 MsG0180000553.01.T01:CDS 25.0%
! ATAAGCACGTAATACTTATA+TGG + Chr1:7715698-7715717 None:intergenic 25.0%
! ATATAAGTATTACGTGCTTA+TGG - Chr1:7715697-7715716 MsG0180000553.01.T01:intron 25.0%
! CTGAAAAAATGGTTATAAGA+GGG + Chr1:7714260-7714279 None:intergenic 25.0%
! CTTAACACAATAGTAATTGA+TGG - Chr1:7714305-7714324 MsG0180000553.01.T01:intron 25.0%
! GAGAATGAAAAAATCAGATT+AGG + Chr1:7715748-7715767 None:intergenic 25.0%
! GTAAACAAATTAGGATCTAA+GGG - Chr1:7714564-7714583 MsG0180000553.01.T01:intron 25.0%
! GTACTTAGAAGAAAACATTA+GGG - Chr1:7716696-7716715 MsG0180000553.01.T01:intron 25.0%
! GTTAAAAATTAAGGAATCCA+AGG - Chr1:7716721-7716740 MsG0180000553.01.T01:intron 25.0%
! TAAACAAATTAGGATCTAAG+GGG - Chr1:7714565-7714584 MsG0180000553.01.T01:intron 25.0%
! TAAGTTAATCTGGCATTAAT+CGG - Chr1:7714213-7714232 MsG0180000553.01.T01:intron 25.0%
! TCATGAATACAAAAGACATT+TGG + Chr1:7716300-7716319 None:intergenic 25.0%
! TCTGATTACTCTTCTAATTT+AGG - Chr1:7716334-7716353 MsG0180000553.01.T01:CDS 25.0%
! TGTACTTAGAAGAAAACATT+AGG - Chr1:7716695-7716714 MsG0180000553.01.T01:intron 25.0%
! TTTATCTGAATGCTGAAAAT+GGG - Chr1:7714597-7714616 MsG0180000553.01.T01:intron 25.0%
!! AATCTTTTCACCAAAAGTTA+CGG - Chr1:7716632-7716651 MsG0180000553.01.T01:intron 25.0%
!! ATCAGATTAGGTGTTATATT+AGG + Chr1:7715736-7715755 None:intergenic 25.0%
!! GAACAAAGTTTGATAATCTT+TGG - Chr1:7717631-7717650 MsG0180000553.01.T01:intron 25.0%
!! TAACATCTTATTTATCCTTG+AGG + Chr1:7716884-7716903 None:intergenic 25.0%
!! TCAGATTAGGTGTTATATTA+GGG + Chr1:7715735-7715754 None:intergenic 25.0%
!! TGAAAAACTTTGCAAGTTTT+AGG + Chr1:7715340-7715359 None:intergenic 25.0%
!!! ATAGATTTTTTTCTCATAGG+GGG - Chr1:7715402-7715421 MsG0180000553.01.T01:intron 25.0%
!!! ATCTGATTTTTTCATTCTCT+AGG - Chr1:7715749-7715768 MsG0180000553.01.T01:intron 25.0%
!!! CTAAGTTTTTTCATTCAACT+AGG + Chr1:7717137-7717156 None:intergenic 25.0%
!!! CTGATAGATTTTTTTCTCAT+AGG - Chr1:7715399-7715418 MsG0180000553.01.T01:intron 25.0%
!!! GATAGATTTTTTTCTCATAG+GGG - Chr1:7715401-7715420 MsG0180000553.01.T01:intron 25.0%
!!! TAAGAGAAGTTTTGTATATG+AGG + Chr1:7715489-7715508 None:intergenic 25.0%
!!! TGGTTTTATAATGTTGAGTT+AGG + Chr1:7716367-7716386 None:intergenic 25.0%
AAAACCAACTTGTAAAGTGA+GGG - Chr1:7716380-7716399 MsG0180000553.01.T01:CDS 30.0%
AAATGACTAGTAGACTAAAG+TGG - Chr1:7717463-7717482 MsG0180000553.01.T01:intron 30.0%
AAGAGGTTCACAACTTATAA+AGG + Chr1:7714080-7714099 None:intergenic 30.0%
AAGTTAATCTGGCATTAATC+GGG - Chr1:7714214-7714233 MsG0180000553.01.T01:intron 30.0%
AATAAGCTGAAAACAGCTTA+TGG + Chr1:7717022-7717041 None:intergenic 30.0%
AATACATAACAGTCATAGAC+AGG - Chr1:7717839-7717858 MsG0180000553.01.T01:CDS 30.0%
ACCAATAAAACATTCCTTCA+AGG + Chr1:7715887-7715906 None:intergenic 30.0%
AGACTACTATATTAGTGAAG+CGG + Chr1:7715002-7715021 None:intergenic 30.0%
AGAGGTTCACAACTTATAAA+GGG + Chr1:7714079-7714098 None:intergenic 30.0%
ATACCAGCAAAAATGAAGTA+AGG + Chr1:7713925-7713944 None:intergenic 30.0%
ATCTCTTCATCAATTCTTGT+AGG + Chr1:7714972-7714991 None:intergenic 30.0%
ATGAGATTGAACCTAAAGTT+TGG - Chr1:7717396-7717415 MsG0180000553.01.T01:intron 30.0%
ATGGAAAGATAACAAAAGCA+TGG + Chr1:7715072-7715091 None:intergenic 30.0%
ATTATACCAATACGCTCTAA+AGG - Chr1:7717296-7717315 MsG0180000553.01.T01:intron 30.0%
CAAAAGTAATAGTTATGAGC+AGG + Chr1:7714519-7714538 None:intergenic 30.0%
CAAAGAAAATGTGGATTCAA+AGG - Chr1:7717748-7717767 MsG0180000553.01.T01:intron 30.0%
CATTGAAGAATCAAGATGTA+TGG - Chr1:7715814-7715833 MsG0180000553.01.T01:intron 30.0%
CATTTGCACTTAGATACTAT+GGG - Chr1:7714338-7714357 MsG0180000553.01.T01:intron 30.0%
CCTGAAAAAATGGTTATAAG+AGG + Chr1:7714261-7714280 None:intergenic 30.0%
CTATTAGGATTCTCTATTAG+TGG - Chr1:7715260-7715279 MsG0180000553.01.T01:intron 30.0%
GATAAGTACATGTATAGACA+AGG + Chr1:7715843-7715862 None:intergenic 30.0%
GATGTTAAATCCTTGTGATT+AGG - Chr1:7716897-7716916 MsG0180000553.01.T01:intron 30.0%
GATTAATGCCAGATTAACTT+AGG + Chr1:7714214-7714233 None:intergenic 30.0%
GGAAGAAAAGAAAAATCAAG+AGG + Chr1:7715319-7715338 None:intergenic 30.0%
GGTAAACAAATTAGGATCTA+AGG - Chr1:7714563-7714582 MsG0180000553.01.T01:intron 30.0%
GGTATAATATTGCTCCTAAA+GGG + Chr1:7717284-7717303 None:intergenic 30.0%
GTGATTTCACAATGTCAATA+TGG + Chr1:7715657-7715676 None:intergenic 30.0%
GTTGTTTATGGAATAAGTCA+AGG - Chr1:7713729-7713748 MsG0180000553.01.T01:CDS 30.0%
GTTTATCTGAATGCTGAAAA+TGG - Chr1:7714596-7714615 MsG0180000553.01.T01:intron 30.0%
TAAAACCAACTTGTAAAGTG+AGG - Chr1:7716379-7716398 MsG0180000553.01.T01:CDS 30.0%
TAAGATGTGACCTGAAAAAA+TGG + Chr1:7714271-7714290 None:intergenic 30.0%
TATGGAATAAGTCAAGGTTT+AGG - Chr1:7713735-7713754 MsG0180000553.01.T01:CDS 30.0%
TCATTTGCACTTAGATACTA+TGG - Chr1:7714337-7714356 MsG0180000553.01.T01:intron 30.0%
TGATCTTTGTTCAAATGTGT+TGG - Chr1:7713960-7713979 MsG0180000553.01.T01:CDS 30.0%
TGGTATAATATTGCTCCTAA+AGG + Chr1:7717285-7717304 None:intergenic 30.0%
TTATCTGAATGCTGAAAATG+GGG - Chr1:7714598-7714617 MsG0180000553.01.T01:intron 30.0%
TTATTCAGTACACTTGTTCT+AGG - Chr1:7714669-7714688 MsG0180000553.01.T01:intron 30.0%
TTATTGGTATACAGACTCAA+AGG - Chr1:7715899-7715918 MsG0180000553.01.T01:intron 30.0%
TTCTTCTTCCAAAGAAAATG+TGG - Chr1:7717739-7717758 MsG0180000553.01.T01:intron 30.0%
TTGGATTGTTAAGCCTTTAT+GGG - Chr1:7713857-7713876 MsG0180000553.01.T01:CDS 30.0%
TTTCTCACAGGTATTTGATT+AGG - Chr1:7715932-7715951 MsG0180000553.01.T01:intron 30.0%
! AAATGAAGTAAGGTTTTCTC+CGG + Chr1:7713915-7713934 None:intergenic 30.0%
! ACTGATGTTCTTCCTATTTT+TGG - Chr1:7713886-7713905 MsG0180000553.01.T01:CDS 30.0%
! AGCATTTTAAACCATTCACT+TGG + Chr1:7713669-7713688 None:intergenic 30.0%
! AGCTCAATTTATGTTCTAGA+TGG - Chr1:7713999-7714018 MsG0180000553.01.T01:CDS 30.0%
! ATATTTTCAATCAGCTCAGT+CGG - Chr1:7717256-7717275 MsG0180000553.01.T01:intron 30.0%
! ATCTTTTCACCAAAAGTTAC+GGG - Chr1:7716633-7716652 MsG0180000553.01.T01:intron 30.0%
! CAAATGTTGATGGAATAACA+AGG - Chr1:7716485-7716504 MsG0180000553.01.T01:intron 30.0%
! CTGCTCATAACTATTACTTT+TGG - Chr1:7714517-7714536 MsG0180000553.01.T01:intron 30.0%
! CTTTGAATCCACATTTTCTT+TGG + Chr1:7717750-7717769 None:intergenic 30.0%
! GCTCAATTTATGTTCTAGAT+GGG - Chr1:7714000-7714019 MsG0180000553.01.T01:CDS 30.0%
! TCCTTGAAGGAATGTTTTAT+TGG - Chr1:7715883-7715902 MsG0180000553.01.T01:intron 30.0%
! TCTTTCTATTTTCCTCTGAT+CGG - Chr1:7715573-7715592 MsG0180000553.01.T01:CDS 30.0%
! TTAGTCAAAGGGTTTAAAAC+CGG - Chr1:7714372-7714391 MsG0180000553.01.T01:intron 30.0%
! TTCTCTATGCTCTCTTTTTA+AGG + Chr1:7716263-7716282 None:intergenic 30.0%
! TTTGAGACTGTTTGAGAATT+GGG - Chr1:7716967-7716986 MsG0180000553.01.T01:intron 30.0%
!! AAACCTTACTTCATTTTTGC+TGG - Chr1:7713919-7713938 MsG0180000553.01.T01:CDS 30.0%
!! TTTGGAGTAGTTGTTGTTTA+TGG - Chr1:7713717-7713736 MsG0180000553.01.T01:CDS 30.0%
!!! ATGCATTGGAGTTTTGTTTT+TGG - Chr1:7713699-7713718 MsG0180000553.01.T01:CDS 30.0%
!!! CCTCTTATAACCATTTTTTC+AGG - Chr1:7714258-7714277 MsG0180000553.01.T01:intron 30.0%
!!! TTCATTTTTTGCTCAGATTC+TGG + Chr1:7713601-7713620 None:intergenic 30.0%
!!! TTCTTCCTATTTTTGGATAC+CGG - Chr1:7713893-7713912 MsG0180000553.01.T01:CDS 30.0%
!!! TTTGGTTAGCGATTTTGATT+CGG - Chr1:7717649-7717668 MsG0180000553.01.T01:intron 30.0%
AAAATCAAGAGGCTAACCAT+AGG + Chr1:7715308-7715327 None:intergenic 35.0%
AAAGAGTTAGGATCAACTCT+AGG + Chr1:7717717-7717736 None:intergenic 35.0%
AAATCAAGAGGCTAACCATA+GGG + Chr1:7715307-7715326 None:intergenic 35.0%
AAATGCAAGACAAAGGTTAC+TGG + Chr1:7717211-7717230 None:intergenic 35.0%
AAATTGCCAACACAAGATGA+AGG + Chr1:7715100-7715119 None:intergenic 35.0%
AATCCGGTATACCAAACTTT+AGG + Chr1:7717410-7717429 None:intergenic 35.0%
AATGTTCCTTCAATACCAGA+TGG + Chr1:7717522-7717541 None:intergenic 35.0%
ACAAAACTTCTCTTACAGAC+AGG - Chr1:7715494-7715513 MsG0180000553.01.T01:intron 35.0%
ACCATTGTTCCATAACATCT+TGG + Chr1:7714644-7714663 None:intergenic 35.0%
ACTAAAAACAGCATGCAAAG+TGG + Chr1:7717693-7717712 None:intergenic 35.0%
ACTTAGATACTATGGGAGAT+TGG - Chr1:7714345-7714364 MsG0180000553.01.T01:intron 35.0%
AGAAAATGTGGATTCAAAGG+TGG - Chr1:7717751-7717770 MsG0180000553.01.T01:intron 35.0%
AGAAACCAAGGATGTTGAAT+TGG - Chr1:7717790-7717809 MsG0180000553.01.T01:CDS 35.0%
AGATTGGACTCTTAGTCAAA+GGG - Chr1:7714361-7714380 MsG0180000553.01.T01:intron 35.0%
AGCTGGACTTATAATTTGGT+CGG - Chr1:7715447-7715466 MsG0180000553.01.T01:intron 35.0%
AGTTTAGTTACTTGTAAGCG+CGG - Chr1:7714144-7714163 MsG0180000553.01.T01:CDS 35.0%
ATATATATTTGTGGCTGCCA+TGG - Chr1:7716826-7716845 MsG0180000553.01.T01:intron 35.0%
ATCACAACAAAGACGTAATC+CGG + Chr1:7717426-7717445 None:intergenic 35.0%
ATGAAACCTATACTTTCCTG+TGG + Chr1:7717238-7717257 None:intergenic 35.0%
ATGTCTCAATGATTGCAATG+AGG + Chr1:7714727-7714746 None:intergenic 35.0%
ATTCTCAGAAACATCGTAGT+AGG - Chr1:7715613-7715632 MsG0180000553.01.T01:CDS 35.0%
CAAAAAGACTCCTAATCACA+AGG + Chr1:7716910-7716929 None:intergenic 35.0%
CAAATACCTGTGAGAAAGAT+GGG + Chr1:7715929-7715948 None:intergenic 35.0%
CAATACGAAGAACTAAGACA+TGG - Chr1:7714479-7714498 MsG0180000553.01.T01:intron 35.0%
CATAAAGGCTTAACAATCCA+AGG + Chr1:7713858-7713877 None:intergenic 35.0%
CCATTGTTCCATAACATCTT+GGG + Chr1:7714643-7714662 None:intergenic 35.0%
CTGAGTTTGAATATCCTTGA+AGG - Chr1:7715870-7715889 MsG0180000553.01.T01:intron 35.0%
CTGGAATTACATCTATTCCT+TGG - Chr1:7713838-7713857 MsG0180000553.01.T01:CDS 35.0%
CTTAGATCGCAAGGATATAA+GGG - Chr1:7714767-7714786 MsG0180000553.01.T01:intron 35.0%
CTTATTTATCCTTGAGGTAG+AGG + Chr1:7716878-7716897 None:intergenic 35.0%
CTTGGATTGTTAAGCCTTTA+TGG - Chr1:7713856-7713875 MsG0180000553.01.T01:CDS 35.0%
GAACCTAAAGTTTGGTATAC+CGG - Chr1:7717404-7717423 MsG0180000553.01.T01:intron 35.0%
GATATTCAAACTCAGTGCAA+AGG + Chr1:7715865-7715884 None:intergenic 35.0%
GCATTTCATCTTCCCTTATA+TGG - Chr1:7715994-7716013 MsG0180000553.01.T01:intron 35.0%
GGAAGAAGAATGAAAGAGTT+AGG + Chr1:7717729-7717748 None:intergenic 35.0%
GTCTTGCATCAAATGATAGA+AGG + Chr1:7716114-7716133 None:intergenic 35.0%
TAGAAGGGTTATAAACGAGA+AGG - Chr1:7714879-7714898 MsG0180000553.01.T01:intron 35.0%
TAGATAAGTTCACTGGAACT+TGG - Chr1:7716586-7716605 MsG0180000553.01.T01:intron 35.0%
TATTGACACTTCAGAAACCA+AGG - Chr1:7717778-7717797 MsG0180000553.01.T01:CDS 35.0%
TCAAATACCTGTGAGAAAGA+TGG + Chr1:7715930-7715949 None:intergenic 35.0%
TCTCGTTTATAACCCTTCTA+AGG + Chr1:7714879-7714898 None:intergenic 35.0%
TCTTCTATTGGTGCACTATT+AGG - Chr1:7715245-7715264 MsG0180000553.01.T01:intron 35.0%
TGAAAACCTTCATCTTGTGT+TGG - Chr1:7715091-7715110 MsG0180000553.01.T01:intron 35.0%
TGAAATTCTCATGTCTACTG+TGG - Chr1:7716076-7716095 MsG0180000553.01.T01:intron 35.0%
TGAAGAATCAAGATGTATGG+AGG - Chr1:7715817-7715836 MsG0180000553.01.T01:intron 35.0%
TGCACCAATAGAAGAACTAA+AGG + Chr1:7715240-7715259 None:intergenic 35.0%
TGCTATCAAGAGAAATGCAT+TGG - Chr1:7713685-7713704 MsG0180000553.01.T01:CDS 35.0%
TGGAAGAAAATGCAAGACAA+AGG + Chr1:7717218-7717237 None:intergenic 35.0%
TGGACTTCTTTCATCATCAT+GGG - Chr1:7717572-7717591 MsG0180000553.01.T01:CDS 35.0%
TGTAAGCGCGGTTATTTATA+GGG - Chr1:7714156-7714175 MsG0180000553.01.T01:CDS 35.0%
TTCAATAAGCTCTCCATGAT+AGG - Chr1:7717041-7717060 MsG0180000553.01.T01:intron 35.0%
TTCATGAGACAACCTTAGAA+GGG - Chr1:7714864-7714883 MsG0180000553.01.T01:intron 35.0%
TTCCAGCTGGACTTATAATT+TGG - Chr1:7715443-7715462 MsG0180000553.01.T01:intron 35.0%
TTGTAAGCGCGGTTATTTAT+AGG - Chr1:7714155-7714174 MsG0180000553.01.T01:CDS 35.0%
TTTCATGAGACAACCTTAGA+AGG - Chr1:7714863-7714882 MsG0180000553.01.T01:intron 35.0%
TTTCTCCGGTATCCAAAAAT+AGG + Chr1:7713901-7713920 None:intergenic 35.0%
TTTGCATCAAGTGAGTTAGA+AGG - Chr1:7716179-7716198 MsG0180000553.01.T01:CDS 35.0%
! ACACAAGATGAAGGTTTTCA+TGG + Chr1:7715091-7715110 None:intergenic 35.0%
! CAAGGTTTTACTTATAGCAG+TGG - Chr1:7716503-7716522 MsG0180000553.01.T01:intron 35.0%
! CATTCAGAGACTTACTCTTT+TGG - Chr1:7717325-7717344 MsG0180000553.01.T01:intron 35.0%
! CTTGTGATTAGGAGTCTTTT+TGG - Chr1:7716908-7716927 MsG0180000553.01.T01:intron 35.0%
! GAATTTTTGTCGCTCATTGA+TGG - Chr1:7715022-7715041 MsG0180000553.01.T01:intron 35.0%
! GTTTTTGCATTCCAAGTGAA+TGG - Chr1:7713655-7713674 MsG0180000553.01.T01:CDS 35.0%
! TCATTTGTACTTTTGCCAAG+TGG + Chr1:7716787-7716806 None:intergenic 35.0%
! TTGACTCGAAATAAAGCTCT+CGG + Chr1:7716228-7716247 None:intergenic 35.0%
! TTGATGGTTGCAGGTTTATT+AGG - Chr1:7715038-7715057 MsG0180000553.01.T01:intron 35.0%
! TTTCTTCCACAGGAAAGTAT+AGG - Chr1:7717229-7717248 MsG0180000553.01.T01:intron 35.0%
!! AGTCAAAGGGTGTTAGAATA+TGG - Chr1:7713628-7713647 MsG0180000553.01.T01:intron 35.0%
!! CAAGGGTTTTGATATCTACT+AGG - Chr1:7714423-7714442 MsG0180000553.01.T01:intron 35.0%
!! CTTTGAGACTGTTTGAGAAT+TGG - Chr1:7716966-7716985 MsG0180000553.01.T01:intron 35.0%
!! TCATCTTGTGTTGGCAATTT+TGG - Chr1:7715100-7715119 MsG0180000553.01.T01:intron 35.0%
!! TGTGCCTTTAGTTCTTCTAT+TGG - Chr1:7715233-7715252 MsG0180000553.01.T01:intron 35.0%
!! TGTGTTTCTTATAGTGGATG+TGG - Chr1:7714913-7714932 MsG0180000553.01.T01:intron 35.0%
AAAACCGGTCTTTGAGCATT+TGG - Chr1:7714387-7714406 MsG0180000553.01.T01:intron 40.0%
AAACCGGTCTTTGAGCATTT+GGG - Chr1:7714388-7714407 MsG0180000553.01.T01:intron 40.0%
AACTTTGCATGTCAGAAGCA+AGG + Chr1:7715211-7715230 None:intergenic 40.0%
AAGTGGTGCAATTGTTGTGA+AGG - Chr1:7716019-7716038 MsG0180000553.01.T01:intron 40.0%
AATGGGGTCATTATCTCCTT+TGG - Chr1:7714614-7714633 MsG0180000553.01.T01:intron 40.0%
ACTTTGCATGTCAGAAGCAA+GGG + Chr1:7715210-7715229 None:intergenic 40.0%
AGAACGTGGACAAATGTTGA+TGG - Chr1:7716475-7716494 MsG0180000553.01.T01:intron 40.0%
AGACACCAATTCAACATCCT+TGG + Chr1:7717798-7717817 None:intergenic 40.0%
AGTTCACTGGAACTTGGTAT+TGG - Chr1:7716592-7716611 MsG0180000553.01.T01:intron 40.0%
AGTTGCTCTATGGTCTATCA+GGG - Chr1:7717352-7717371 MsG0180000553.01.T01:intron 40.0%
ATAACATCTTGGGAAGCCAA+AGG + Chr1:7714633-7714652 None:intergenic 40.0%
ATAGCCCTCACTTTACAAGT+TGG + Chr1:7716387-7716406 None:intergenic 40.0%
ATATAAGGGACACAGTCTCT+TGG - Chr1:7714781-7714800 MsG0180000553.01.T01:intron 40.0%
ATGAGCAGGGTTTCAAATTG+CGG + Chr1:7714505-7714524 None:intergenic 40.0%
ATTTATCCTTGAGGTAGAGG+CGG + Chr1:7716875-7716894 None:intergenic 40.0%
CATCAGTAAGAAGCCCATAA+AGG + Chr1:7713873-7713892 None:intergenic 40.0%
CCCAAGATGTTATGGAACAA+TGG - Chr1:7714640-7714659 MsG0180000553.01.T01:intron 40.0%
CGTGCTTATGGTAATTTCCA+TGG - Chr1:7715709-7715728 MsG0180000553.01.T01:intron 40.0%
CTCTCGGAGTACATGTAAAT+GGG + Chr1:7716212-7716231 None:intergenic 40.0%
CTGGACTTCTTTCATCATCA+TGG - Chr1:7717571-7717590 MsG0180000553.01.T01:CDS 40.0%
GACCAAATTATAAGTCCAGC+TGG + Chr1:7715448-7715467 None:intergenic 40.0%
GAGATTGGACTCTTAGTCAA+AGG - Chr1:7714360-7714379 MsG0180000553.01.T01:intron 40.0%
GCAATTGTTGTGAAGGTAGT+GGG - Chr1:7716026-7716045 MsG0180000553.01.T01:intron 40.0%
GCTTAGATCGCAAGGATATA+AGG - Chr1:7714766-7714785 MsG0180000553.01.T01:intron 40.0%
GGAATAAGTCAAGGTTTAGG+TGG - Chr1:7713738-7713757 MsG0180000553.01.T01:CDS 40.0%
GGACTTCTTTCATCATCATG+GGG - Chr1:7717573-7717592 MsG0180000553.01.T01:CDS 40.0%
GGCATCTTTGTTCACCTTAT+AGG - Chr1:7715281-7715300 MsG0180000553.01.T01:intron 40.0%
GGGTTAGACCTAAGTTAATC+TGG - Chr1:7714203-7714222 MsG0180000553.01.T01:intron 40.0%
GTCAAATGTAGCTTCAGTTG+TGG - Chr1:7714701-7714720 MsG0180000553.01.T01:intron 40.0%
TCTTCCCTTATATGGACAAG+TGG - Chr1:7716002-7716021 MsG0180000553.01.T01:intron 40.0%
TGCAATTGTTGTGAAGGTAG+TGG - Chr1:7716025-7716044 MsG0180000553.01.T01:intron 40.0%
TGCACCACTTGTCCATATAA+GGG + Chr1:7716009-7716028 None:intergenic 40.0%
TGGTATACAGACTCAAAGGA+TGG - Chr1:7715903-7715922 MsG0180000553.01.T01:intron 40.0%
TTGCACCACTTGTCCATATA+AGG + Chr1:7716010-7716029 None:intergenic 40.0%
TTTGAGCTGAGTACAAGCAT+AGG + Chr1:7717492-7717511 None:intergenic 40.0%
! ACTTTTGCCATATCTCGATG+TGG - Chr1:7716423-7716442 MsG0180000553.01.T01:intron 40.0%
! ACTTTTGGCGCTTTTGCTTT+TGG - Chr1:7714532-7714551 MsG0180000553.01.T01:intron 40.0%
! ATACTCGAACCCGTAACTTT+TGG + Chr1:7716645-7716664 None:intergenic 40.0%
! CTTTGTCCATCTGGTATTGA+AGG - Chr1:7717513-7717532 MsG0180000553.01.T01:intron 40.0%
! CTTTTGCCATATCTCGATGT+GGG - Chr1:7716424-7716443 MsG0180000553.01.T01:intron 40.0%
! GGTTTTACTTATAGCAGTGG+CGG - Chr1:7716506-7716525 MsG0180000553.01.T01:intron 40.0%
! TAGGTGTTATATTAGGGCCA+TGG + Chr1:7715729-7715748 None:intergenic 40.0%
! TCTCTTGTACACAGTGTTGA+TGG - Chr1:7717815-7717834 MsG0180000553.01.T01:CDS 40.0%
! TGAGAATTGGGAGAGCATAT+GGG - Chr1:7716979-7716998 MsG0180000553.01.T01:intron 40.0%
! TGTCTTGCATTTTCTTCCAC+AGG - Chr1:7717219-7717238 MsG0180000553.01.T01:intron 40.0%
! TTAATCGGGTTGTATGGTGA+TGG - Chr1:7714228-7714247 MsG0180000553.01.T01:intron 40.0%
! TTGAGAATTGGGAGAGCATA+TGG - Chr1:7716978-7716997 MsG0180000553.01.T01:intron 40.0%
! TTTGGCTTCCCAAGATGTTA+TGG - Chr1:7714632-7714651 MsG0180000553.01.T01:intron 40.0%
! TTTTGATATCTACTAGGCCG+CGG - Chr1:7714429-7714448 MsG0180000553.01.T01:intron 40.0%
! TTTTGGACTCAGTTGCTCTA+TGG - Chr1:7717342-7717361 MsG0180000553.01.T01:intron 40.0%
!! CGTAATCCTTTAGAGCGTAT+TGG + Chr1:7717305-7717324 None:intergenic 40.0%
!! CTTTTGGCGCTTTTGCTTTT+GGG - Chr1:7714533-7714552 MsG0180000553.01.T01:intron 40.0%
!!! CAATTTTGGCCTTAACAGCA+GGG - Chr1:7715114-7715133 MsG0180000553.01.T01:intron 40.0%
!!! TTTTTCTCATAGGGGGTGTT+TGG - Chr1:7715409-7715428 MsG0180000553.01.T01:intron 40.0%
ATGGTAGAACAGCGACGATT+AGG + Chr1:7717067-7717086 None:intergenic 45.0%
CACCAAAACTTTGTGGATGC+CGG - Chr1:7715774-7715793 MsG0180000553.01.T01:intron 45.0%
CAGTTGCTCTATGGTCTATC+AGG - Chr1:7717351-7717370 MsG0180000553.01.T01:intron 45.0%
CTAGGTGCACCAAAACTTTG+TGG - Chr1:7715767-7715786 MsG0180000553.01.T01:intron 45.0%
CTCAACACACTCTCATGTTC+AGG - Chr1:7716449-7716468 MsG0180000553.01.T01:intron 45.0%
CTGTGCAACACATGCATCAA+TGG + Chr1:7715168-7715187 None:intergenic 45.0%
CTTCTTTCATCATCATGGGG+TGG - Chr1:7717576-7717595 MsG0180000553.01.T01:CDS 45.0%
GCATAAACCTGTGCTTCAGA+AGG + Chr1:7713819-7713838 None:intergenic 45.0%
GCTCTCGGAGTACATGTAAA+TGG + Chr1:7716213-7716232 None:intergenic 45.0%
GTGGGTGGGGTAAACAAATT+AGG - Chr1:7714555-7714574 MsG0180000553.01.T01:intron 45.0%
TCATGTTCAGGACTAGAACG+TGG - Chr1:7716461-7716480 MsG0180000553.01.T01:intron 45.0%
TGAGATCCCACATCGAGATA+TGG + Chr1:7716433-7716452 None:intergenic 45.0%
TGTTCACCTTATAGGCCCTA+TGG - Chr1:7715289-7715308 MsG0180000553.01.T01:intron 45.0%
! AGCTCAAAGCTTTGTCCATC+TGG - Chr1:7717504-7717523 MsG0180000553.01.T01:intron 45.0%
! CTGGCATTAATCGGGTTGTA+TGG - Chr1:7714222-7714241 MsG0180000553.01.T01:intron 45.0%
! GGTTTGATGACTATTCCAGC+TGG - Chr1:7715430-7715449 MsG0180000553.01.T01:intron 45.0%
! TCTGAAGCACAGGTTTATGC+TGG - Chr1:7713819-7713838 MsG0180000553.01.T01:CDS 45.0%
!! AGTTCAACCTTCTGAAGCAC+AGG - Chr1:7713809-7713828 MsG0180000553.01.T01:CDS 45.0%
!! TTGTTGTGAAGGTAGTGGGT+TGG - Chr1:7716030-7716049 MsG0180000553.01.T01:intron 45.0%
!!! GCAATTTTGGCCTTAACAGC+AGG - Chr1:7715113-7715132 MsG0180000553.01.T01:intron 45.0%
!! AAAAATATTGAAATAAATAT+TGG + Chr1:7717878-7717897 None:intergenic 5.0%
AAACTTTGTGGATGCCGGCA+AGG - Chr1:7715779-7715798 MsG0180000553.01.T01:intron 50.0%
AGCGACGATTAGGCCTATCA+TGG + Chr1:7717057-7717076 None:intergenic 50.0%
AGGTATGCACGTTCGTACCT+TGG + Chr1:7716741-7716760 None:intergenic 50.0%
ATGTCGCAGCTTAGATCGCA+AGG - Chr1:7714758-7714777 MsG0180000553.01.T01:intron 50.0%
CCACCCAAATGCTCAAAGAC+CGG + Chr1:7714394-7714413 None:intergenic 50.0%
CGATCTAAGCTGCGACATCA+AGG + Chr1:7714756-7714775 None:intergenic 50.0%
CGTGCATACCTCTGCTTAAC+AGG - Chr1:7716750-7716769 MsG0180000553.01.T01:intron 50.0%
CTTGTGCATGATCCGATCAG+AGG + Chr1:7715588-7715607 None:intergenic 50.0%
CTTTCATCATCATGGGGTGG+TGG - Chr1:7717579-7717598 MsG0180000553.01.T01:CDS 50.0%
GGCTAACCATAGGGCCTATA+AGG + Chr1:7715298-7715317 None:intergenic 50.0%
GTCAGAAGCAAGGGAAGGAT+GGG + Chr1:7715201-7715220 None:intergenic 50.0%
TGCATGTCAGAAGCAAGGGA+AGG + Chr1:7715206-7715225 None:intergenic 50.0%
TGTCAGAAGCAAGGGAAGGA+TGG + Chr1:7715202-7715221 None:intergenic 50.0%
! TGCCGGCATCCACAAAGTTT+TGG + Chr1:7715779-7715798 None:intergenic 50.0%
! TGTAGTCCACATAGCCTTGC+CGG + Chr1:7715796-7715815 None:intergenic 50.0%
! TGTCGCTCATTGATGGTTGC+AGG - Chr1:7715029-7715048 MsG0180000553.01.T01:intron 50.0%
!! CTTTTGCTTTTGGGTGGGTG+GGG - Chr1:7714542-7714561 MsG0180000553.01.T01:intron 50.0%
!! GCTTTTGCTTTTGGGTGGGT+GGG - Chr1:7714541-7714560 MsG0180000553.01.T01:intron 50.0%
!! TGGCGCTTTTGCTTTTGGGT+GGG - Chr1:7714537-7714556 MsG0180000553.01.T01:intron 50.0%
!! TTGGCGCTTTTGCTTTTGGG+TGG - Chr1:7714536-7714555 MsG0180000553.01.T01:intron 50.0%
CCGGTCTTTGAGCATTTGGG+TGG - Chr1:7714391-7714410 MsG0180000553.01.T01:intron 55.0%
GGATGGCCCATCTTTCTCAC+AGG - Chr1:7715920-7715939 MsG0180000553.01.T01:intron 55.0%
GGTTTAGGTGGTGCTCTTGC+TGG - Chr1:7713750-7713769 MsG0180000553.01.T01:CDS 55.0%
GTCAAACGCAACCTGAACCG+CGG + Chr1:7714449-7714468 None:intergenic 55.0%
TATCTACTAGGCCGCGGTTC+AGG - Chr1:7714435-7714454 MsG0180000553.01.T01:intron 55.0%
TCCAGCACTCCCTGCTGTTA+AGG + Chr1:7715126-7715145 None:intergenic 55.0%
TTGGGTGGTCGCGACTTCAA+GGG - Chr1:7714406-7714425 MsG0180000553.01.T01:intron 55.0%
TTTGCCAAGTGGCTATGCGC+AGG + Chr1:7716776-7716795 None:intergenic 55.0%
TTTGGGTGGTCGCGACTTCA+AGG - Chr1:7714405-7714424 MsG0180000553.01.T01:intron 55.0%
! CAGCTCAGTCGGTTCCCTTT+AGG - Chr1:7717267-7717286 MsG0180000553.01.T01:intron 55.0%
!! CGCTTTTGCTTTTGGGTGGG+TGG - Chr1:7714540-7714559 MsG0180000553.01.T01:intron 55.0%
AGGCGGAGCTTCCTTGTGAC+AGG + Chr1:7716858-7716877 None:intergenic 60.0%
CGGAGCTTCCTTGTGACAGG+GGG + Chr1:7716855-7716874 None:intergenic 60.0%
GAAGCTCCGCCTCTACCTCA+AGG - Chr1:7716866-7716885 MsG0180000553.01.T01:intron 60.0%
GCGGAGCTTCCTTGTGACAG+GGG + Chr1:7716856-7716875 None:intergenic 60.0%
GGAGCTTCCTTGTGACAGGG+GGG + Chr1:7716854-7716873 None:intergenic 60.0%
GGCGGAGCTTCCTTGTGACA+GGG + Chr1:7716857-7716876 None:intergenic 60.0%
GGTGGTGCTCTTGCTGGTGT+TGG - Chr1:7713756-7713775 MsG0180000553.01.T01:CDS 60.0%
TGCGCAGGCCTGTTAAGCAG+AGG + Chr1:7716761-7716780 None:intergenic 60.0%
TGGATGCCGGCAAGGCTATG+TGG - Chr1:7715787-7715806 MsG0180000553.01.T01:intron 60.0%
! GCCTTAACAGCAGGGAGTGC+TGG - Chr1:7715122-7715141 MsG0180000553.01.T01:intron 60.0%
!! AACAGCAGGGAGTGCTGGAG+TGG - Chr1:7715127-7715146 MsG0180000553.01.T01:intron 60.0%
CAGGCCTGCGCATAGCCACT+TGG - Chr1:7716769-7716788 MsG0180000553.01.T01:intron 65.0%
CATGGCACCCCCCTGTCACA+AGG - Chr1:7716844-7716863 MsG0180000553.01.T01:intron 65.0%
!! CTTGTGACAGGGGGGTGCCA+TGG + Chr1:7716846-7716865 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 7713565 7717914 7713565 ID=MsG0180000553.01;Name=MsG0180000553.01
Chr1 mRNA 7713565 7717914 7713565 ID=MsG0180000553.01.T01;Parent=MsG0180000553.01;Name=MsG0180000553.01.T01;_AED=0.30;_eAED=0.31;_QI=0|0.2|0.33|1|1|1|6|0|424
Chr1 exon 7717757 7717914 7717757 ID=MsG0180000553.01.T01:exon:2814;Parent=MsG0180000553.01.T01
Chr1 exon 7717539 7717648 7717539 ID=MsG0180000553.01.T01:exon:2815;Parent=MsG0180000553.01.T01
Chr1 exon 7716169 7716428 7716169 ID=MsG0180000553.01.T01:exon:2816;Parent=MsG0180000553.01.T01
Chr1 exon 7715538 7715708 7715538 ID=MsG0180000553.01.T01:exon:2817;Parent=MsG0180000553.01.T01
Chr1 exon 7713643 7714209 7713643 ID=MsG0180000553.01.T01:exon:2818;Parent=MsG0180000553.01.T01
Chr1 exon 7713565 7713573 7713565 ID=MsG0180000553.01.T01:exon:2819;Parent=MsG0180000553.01.T01
Chr1 CDS 7717757 7717914 7717757 ID=MsG0180000553.01.T01:cds;Parent=MsG0180000553.01.T01
Chr1 CDS 7717539 7717648 7717539 ID=MsG0180000553.01.T01:cds;Parent=MsG0180000553.01.T01
Chr1 CDS 7716169 7716428 7716169 ID=MsG0180000553.01.T01:cds;Parent=MsG0180000553.01.T01
Chr1 CDS 7715538 7715708 7715538 ID=MsG0180000553.01.T01:cds;Parent=MsG0180000553.01.T01
Chr1 CDS 7713643 7714209 7713643 ID=MsG0180000553.01.T01:cds;Parent=MsG0180000553.01.T01
Chr1 CDS 7713565 7713573 7713565 ID=MsG0180000553.01.T01:cds;Parent=MsG0180000553.01.T01
Gene Sequence

>MsG0180000553.01.T01

ATGCAAGAAGAAGAGAATCAAGAAGATTCAGTTCCAGAATCTGAGCAAAAAATGAAGAAAGAAAGTCAAAGGGTGTTAGAATATGGAAGTGTTTTTGCATTCCAAGTGAATGGTTTAAAATGCTATCAAGAGAAATGCATTGGAGTTTTGTTTTTGGAGTTTATGCTGGAATTACATCTATTCCTTGGATTGTTAAGCCTTTATGGGCTTCTTACTGATGTTCTTCCTATTTTTGGATACCGGAGAAAACCTTACTTCATTTTTGCTGGTTTATTAGGAGCAACTGCCATGCTTTTGTTATCTTTCCATGAAAACCTTCATCTTGTGTTGGCAATTTTGGCCTTAACAGCAGGGAGTGCTGGAGTGGCGATAGCAGACGTGACCATTGATGCATGTGTTGCACAGAACAGTATCTCCCATCCTTCCCTTGCTTCTGACATGCAAAGTTTATGTGCCTTTAGTTCTTCTATTGGTGCACTATTAGGATTCTCTATTAGTGGCATCTTTGTTCACCTTATAGGCCCTATGGTGCACCAAAACTTTGTGGATGCCGGCAAGGCTATGTGGACTACATTGAAGAATCAAGATGTATGGAGGCCTTGTCTATACATGTACTTATCCTTTGCACTGAGTTTGAATATCCTTGAAGGAATGTTTTATTGGTATACAGACTCAAAGGATGGCCCATCTTTCTCACAGCTCAGTCGGTTCCCTTTAGGAGCAATATTATACCAATACGCTCTAAAGGATTACGCATTCAGAGACTTACTCTTTTGGACTCAGTTGCTCTATGGTCTATCAGGGATGTTTGATCTTATTTTAGTCATGAGATTGAACCTAAAGTTTGGTATACCGGATTACGTCTTTGTTGTGATTGTCGAAAGCATAGCTCAAATGACTAGTAGACTAAAGTGGATGCCTATGCTTGTACTCAGCTCAAAGCTTTGTCCATCTGGTATTGAAGGAACATTCTTTGCTCTACTAATGTCAATTGATAATGCTGGACTTCTTTCATCATCATGGGGTGGTGGATTTGTACTTCATGTACTAAAGATTACCAGAACAAAGTTTGATAATCTTTGGTTAGCGATTTTGATTCGGAATATTTTAAGACTCACTCCACTTTGCATGCTGTTTTTAGTGCCTAGAGTTGATCCTAACTCTTTCATTCTTCTTCCAAAGAAAATGTGGATTCAAAGGTGGTTGCTATTGACACTTCAGAAACCAAGGATGTTGAATTGGTGTCTCTTGTACACAGTGTTGATGGGCAAATAG
Protein sequence

>MsG0180000553.01.T01

MQEEENQEDSVPESEQKMKKESQRVLEYGSVFAFQVNGLKCYQEKCIGVLFLEFMLELHLFLGLLSLYGLLTDVLPIFGYRRKPYFIFAGLLGATAMLLLSFHENLHLVLAILALTAGSAGVAIADVTIDACVAQNSISHPSLASDMQSLCAFSSSIGALLGFSISGIFVHLIGPMVHQNFVDAGKAMWTTLKNQDVWRPCLYMYLSFALSLNILEGMFYWYTDSKDGPSFSQLSRFPLGAILYQYALKDYAFRDLLFWTQLLYGLSGMFDLILVMRLNLKFGIPDYVFVVIVESIAQMTSRLKWMPMLVLSSKLCPSGIEGTFFALLMSIDNAGLLSSSWGGGFVLHVLKITRTKFDNLWLAILIRNILRLTPLCMLFLVPRVDPNSFILLPKKMWIQRWLLLTLQKPRMLNWCLLYTVLMGK*