AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015702.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015702.01.T01 MTR_3g075040 88.267 750 59 7 1 728 1 743 0.0 1201
MsG0380015702.01.T01 MTR_3g075040 91.442 631 44 4 1 628 1 624 0.0 1168
MsG0380015702.01.T01 MTR_0018s0090 41.457 714 319 18 24 692 1 660 5.15e-123 385
MsG0380015702.01.T01 MTR_0018s0090 40.161 620 291 16 76 648 32 618 9.91e-113 354
MsG0380015702.01.T01 MTR_2g091135 39.695 262 117 6 207 436 308 560 1.12e-46 176
MsG0380015702.01.T01 MTR_2g091135 39.695 262 117 6 207 436 308 560 1.47e-46 176
MsG0380015702.01.T01 MTR_2g091130 38.431 255 130 4 207 436 297 549 6.77e-43 165
MsG0380015702.01.T01 MTR_4g092900 28.601 486 220 15 79 487 51 486 6.75e-42 160
MsG0380015702.01.T01 MTR_4g092900 28.601 486 220 15 79 487 51 486 8.53e-42 160
MsG0380015702.01.T01 MTR_4g092880 28.966 435 230 11 94 487 66 462 1.33e-40 156
MsG0380015702.01.T01 MTR_4g092880 37.387 222 101 4 94 311 66 253 2.71e-38 147
MsG0380015702.01.T01 MTR_4g079650 36.948 249 93 6 206 425 655 868 3.16e-37 150
MsG0380015702.01.T01 MTR_4g079650 36.948 249 93 6 206 425 655 868 4.14e-37 150
MsG0380015702.01.T01 MTR_4g079650 38.605 215 97 5 206 391 655 863 1.11e-35 145
MsG0380015702.01.T01 MTR_2g018270 43.575 179 83 4 147 321 30 194 3.11e-35 140
MsG0380015702.01.T01 MTR_2g018270 51.546 97 43 2 598 693 335 428 7.25e-13 72.0
MsG0380015702.01.T01 MTR_8g070660 42.157 102 56 1 206 304 93 194 1.19e-20 93.2
MsG0380015702.01.T01 MTR_8g070660 42.157 102 56 1 206 304 93 194 1.51e-20 94.7
MsG0380015702.01.T01 MTR_6g033375 27.869 244 162 3 195 426 57 298 2.94e-19 90.1
MsG0380015702.01.T01 MTR_5g069490 30.233 215 128 6 221 426 113 314 8.82e-16 79.7
MsG0380015702.01.T01 MTR_2g437920 38.318 107 59 2 221 324 146 248 1.98e-15 79.3
MsG0380015702.01.T01 MTR_8g062330 38.462 91 53 2 212 301 345 433 4.22e-11 66.2
MsG0380015702.01.T01 MTR_3g115560 36.082 97 60 1 213 309 131 225 5.43e-11 66.2
MsG0380015702.01.T01 MTR_3g115560 36.082 97 60 1 213 309 17 111 7.33e-11 65.9
MsG0380015702.01.T01 MTR_8g005100 37.179 78 47 1 210 287 82 157 8.59e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015702.01.T01 AT5G63320 46.501 643 301 18 24 656 1 610 1.94e-148 460
MsG0380015702.01.T01 AT5G63320 48.927 466 210 11 24 487 1 440 2.40e-130 395
MsG0380015702.01.T01 AT5G63320 48.927 466 210 11 24 487 1 440 2.40e-130 395
MsG0380015702.01.T01 AT5G14270 44.935 612 273 17 89 692 44 599 2.59e-118 371
MsG0380015702.01.T01 AT5G14270 44.935 612 273 17 89 692 44 599 2.59e-118 371
MsG0380015702.01.T01 AT5G14270 44.663 609 280 14 89 692 44 600 2.84e-118 371
MsG0380015702.01.T01 AT3G27260 40.533 676 346 14 24 692 1 627 3.65e-112 356
MsG0380015702.01.T01 AT3G27260 39.941 676 359 12 24 692 1 636 2.88e-111 356
MsG0380015702.01.T01 AT3G27260 40.533 676 346 14 24 692 1 627 1.07e-110 354
MsG0380015702.01.T01 AT3G01770 42.105 608 238 15 89 692 35 532 1.11e-105 336
MsG0380015702.01.T01 AT3G27260 41.138 615 311 13 85 692 8 578 5.50e-100 325
MsG0380015702.01.T01 AT3G01770 43.035 402 194 10 89 487 35 404 4.71e-81 267
MsG0380015702.01.T01 AT1G73150 31.347 386 181 7 75 425 35 371 1.31e-45 169
MsG0380015702.01.T01 AT1G73150 31.347 386 181 7 75 425 35 371 1.37e-45 169
MsG0380015702.01.T01 AT1G06230 38.889 252 120 6 206 425 421 670 1.00e-41 163
MsG0380015702.01.T01 AT1G06230 38.889 252 120 6 206 425 421 670 1.00e-41 163
MsG0380015702.01.T01 AT1G06230 38.889 252 120 6 206 425 421 670 1.00e-41 163
MsG0380015702.01.T01 AT1G06230 38.889 252 120 6 206 425 421 670 1.00e-41 163
MsG0380015702.01.T01 AT1G17790 30.108 372 179 7 98 425 59 393 2.07e-37 147
MsG0380015702.01.T01 AT5G46550 59.804 102 41 0 209 310 72 173 2.77e-33 134
MsG0380015702.01.T01 AT5G10550 34.583 240 141 5 87 325 69 293 1.52e-30 127
MsG0380015702.01.T01 AT5G65630 32.353 238 139 3 94 325 67 288 5.79e-30 125
MsG0380015702.01.T01 AT2G34900 31.646 237 135 7 207 426 1 227 5.92e-25 105
MsG0380015702.01.T01 AT2G34900 31.933 238 135 7 206 426 110 337 1.17e-24 107
MsG0380015702.01.T01 AT3G52280 38.235 102 60 1 206 304 94 195 7.71e-17 83.6
MsG0380015702.01.T01 AT3G52280 36.697 109 66 1 206 311 111 219 1.31e-16 82.8
MsG0380015702.01.T01 AT1G58025 35.789 95 60 1 213 306 222 316 1.52e-11 68.2
MsG0380015702.01.T01 AT1G58025 35.789 95 60 1 213 306 222 316 1.52e-11 68.2
MsG0380015702.01.T01 AT1G58025 35.789 95 60 1 213 306 222 316 1.53e-11 68.2
MsG0380015702.01.T01 AT1G58025 35.789 95 60 1 213 306 222 316 1.53e-11 68.2
MsG0380015702.01.T01 AT1G58025 35.789 95 60 1 213 306 222 316 1.53e-11 68.2
MsG0380015702.01.T01 AT1G58025 35.789 95 60 1 213 306 222 316 1.96e-11 67.8

Find 216 sgRNAs with CRISPR-Local

Find 366 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCCTGCTTCTGAGAATTT+TGG 0.135719 3:+73938201 MsG0380015702.01.T01:five_prime_UTR
TTTCATGAATTAACGAAAAT+TGG 0.139376 3:-73937824 None:intergenic
CTCCAGCTCCCTCTTTCTTT+TGG 0.184231 3:-73942447 None:intergenic
GCTCGACGGTAGAGAGTTTC+AGG 0.216942 3:-73941786 None:intergenic
GACCCACCATTTCCAGTTTC+GGG 0.237877 3:-73941459 None:intergenic
GTTTCACACTGTCCAGCTTT+TGG 0.242538 3:-73939580 None:intergenic
CATCAAACATCCAATGGATT+TGG 0.249907 3:+73939009 MsG0380015702.01.T01:CDS
TTGTGATTGAGAATACTTTC+TGG 0.256920 3:-73938324 None:intergenic
AGTGGAGGATAATTTGAATT+AGG 0.259823 3:-73940402 None:intergenic
CTTAGTAAAGCCTTTGAAAA+AGG 0.265049 3:+73939166 MsG0380015702.01.T01:CDS
ATTTGAAATCGAGGTTGATT+TGG 0.278968 3:+73938606 MsG0380015702.01.T01:CDS
CGTCTGATGTCTCATCAATT+TGG 0.281091 3:+73938926 MsG0380015702.01.T01:CDS
TCTACCGTCGAGCTTTATTA+AGG 0.282672 3:+73941796 MsG0380015702.01.T01:CDS
GGACCCACCATTTCCAGTTT+CGG 0.291714 3:-73941460 None:intergenic
GTGCAGCTTCTTAATGAATC+AGG 0.292897 3:+73940176 MsG0380015702.01.T01:intron
GTTATCAAAATAACTGAAAT+TGG 0.297622 3:+73938101 MsG0380015702.01.T01:five_prime_UTR
AATAACTGAAATTGGTCAAT+TGG 0.297818 3:+73938109 MsG0380015702.01.T01:five_prime_UTR
TCGTCATGTGGTAGAGACTA+TGG 0.304985 3:+73938406 MsG0380015702.01.T01:CDS
ATGGTGGGTCCCAAACTTTA+TGG 0.305859 3:+73941472 MsG0380015702.01.T01:CDS
TTTCAATTGGATTTCTACTT+AGG 0.312221 3:+73937718 MsG0380015702.01.T01:five_prime_UTR
CTCTTAGTTCTAAGGTGATT+GGG 0.321313 3:+73941289 MsG0380015702.01.T01:CDS
GTACACAATTTACCTTTAGA+AGG 0.328869 3:-73940221 None:intergenic
CAAATCCATTGATGATCATC+TGG 0.337579 3:-73942679 None:intergenic
GTTGTTGGAATTTCATCTTA+TGG 0.339479 3:+73938262 MsG0380015702.01.T01:exon
TTCATTTACTCAAATGTGTT+AGG 0.341256 3:+73937965 MsG0380015702.01.T01:five_prime_UTR
CTCGCCTCCTCTTTGAAACT+TGG 0.343353 3:-73942655 None:intergenic
CTTCTGCTTCAGCTTTCCTC+CGG 0.345699 3:-73942412 None:intergenic
TTACGAAAGCCCATAAAGTT+TGG 0.352829 3:-73941482 None:intergenic
TTTGAAATCGAGGTTGATTT+GGG 0.355871 3:+73938607 MsG0380015702.01.T01:CDS
GAACCTATTGATTTCTTACT+TGG 0.356830 3:+73937904 MsG0380015702.01.T01:five_prime_UTR
TCGGATGGGTTGGGTAGCTC+GGG 0.359165 3:+73938434 MsG0380015702.01.T01:CDS
GAAGCTTACGTAATTTGAAC+AGG 0.361875 3:-73939522 None:intergenic
TGGTGGGTCCCAAACTTTAT+GGG 0.363889 3:+73941473 MsG0380015702.01.T01:CDS
GTCAGAACCTCTTAGTTCTA+AGG 0.365851 3:+73941281 MsG0380015702.01.T01:CDS
GTCGGATGGGTTGGGTAGCT+CGG 0.369109 3:+73938433 MsG0380015702.01.T01:CDS
TTCAATTGGATTTCTACTTA+GGG 0.370689 3:+73937719 MsG0380015702.01.T01:five_prime_UTR
TGTTGTTAAATTGAACATTC+CGG 0.371429 3:+73938973 MsG0380015702.01.T01:CDS
GCTTCTTGATGATTATTTGC+TGG 0.374559 3:+73939540 MsG0380015702.01.T01:CDS
AATGTGTTAGGAAATGCTAT+TGG 0.375647 3:+73937977 MsG0380015702.01.T01:five_prime_UTR
CAGATGATCATCAATGGATT+TGG 0.379038 3:+73942680 MsG0380015702.01.T01:CDS
CCTCTTAGTTCTAAGGTGAT+TGG 0.379682 3:+73941288 MsG0380015702.01.T01:CDS
ATAATTCTTTCAGCAGGTTC+TGG 0.379739 3:-73939337 None:intergenic
CTCTTTCAAGAAATCAAGAA+TGG 0.385835 3:-73939425 None:intergenic
CTCTCTGATTCAATAGTATC+TGG 0.389894 3:-73941642 None:intergenic
TGGAGAGCCAACACAGTATA+CGG 0.390467 3:+73938747 MsG0380015702.01.T01:CDS
TAGCTCGGGGAGGGTTGATA+TGG 0.391164 3:+73938448 MsG0380015702.01.T01:CDS
TTTCCAGTTTCGGGATTACT+AGG 0.393300 3:-73941450 None:intergenic
CAATTAAAAGAGAGGGTAAA+GGG 0.395264 3:-73937847 None:intergenic
TTTCTCTTGAGCTTTCAGTA+TGG 0.398691 3:-73941835 None:intergenic
GATCCTAGTAATCCCGAAAC+TGG 0.398992 3:+73941447 MsG0380015702.01.T01:CDS
GAGACAAGTGCACCCTTCAC+TGG 0.402427 3:+73938136 MsG0380015702.01.T01:five_prime_UTR
TACGAAAGCCCATAAAGTTT+GGG 0.404466 3:-73941481 None:intergenic
ATCAAACATCCAATGGATTT+GGG 0.406454 3:+73939010 MsG0380015702.01.T01:CDS
AGAGAACGATGGTGATGCTT+AGG 0.406898 3:+73937643 MsG0380015702.01.T01:five_prime_UTR
GGAGAGAGAAGCAGCCCGGC+AGG 0.409897 3:+73942466 MsG0380015702.01.T01:CDS
GATGTCTCATCAATTTGGTT+GGG 0.409934 3:+73938931 MsG0380015702.01.T01:CDS
TTGAAAGGTAACGACGGATA+TGG 0.411750 3:+73938521 MsG0380015702.01.T01:CDS
TGATGTCTCATCAATTTGGT+TGG 0.423505 3:+73938930 MsG0380015702.01.T01:CDS
GCTTGACTTACGATCAAAAC+AGG 0.424175 3:+73941421 MsG0380015702.01.T01:CDS
ATTACACTTTCTACATAAGT+AGG 0.426240 3:-73939253 None:intergenic
AGCAGCTCTAGTAGTGAATC+TGG 0.427342 3:+73940473 MsG0380015702.01.T01:CDS
TGGGACCACTACGCCCTGGC+AGG 0.429672 3:-73938802 None:intergenic
TCAGATTCAAGTAGTTCATC+TGG 0.431497 3:+73941234 MsG0380015702.01.T01:CDS
AAGAAATCAAGAATGGAATC+AGG 0.433454 3:-73939418 None:intergenic
TTCTGCTTCAGCTTTCCTCC+GGG 0.433559 3:-73942411 None:intergenic
ATAACTGAAATTGGTCAATT+GGG 0.435149 3:+73938110 MsG0380015702.01.T01:five_prime_UTR
ATGGGTGAGTCGGATGGGTT+GGG 0.436222 3:+73938425 MsG0380015702.01.T01:CDS
TACTCCAAAGGTTATGCTAC+TGG 0.436978 3:+73938368 MsG0380015702.01.T01:CDS
CAAAAGCTGCAGAAGAGGCC+CGG 0.440120 3:+73942393 MsG0380015702.01.T01:CDS
TTGATGACATTGAAATAATC+CGG 0.441287 3:-73938992 None:intergenic
AAACCAAGTTGCTTCCTGTT+CGG 0.441398 3:-73938500 None:intergenic
ATGGGTTGGGTAGCTCGGGG+AGG 0.441503 3:+73938438 MsG0380015702.01.T01:CDS
GTATTCTCAATCACAAGTTA+TGG 0.445787 3:+73938331 MsG0380015702.01.T01:CDS
AGTATGAATTCGAACATTGT+TGG 0.446088 3:+73938668 MsG0380015702.01.T01:CDS
GACAATGAGTATAGTTGAAA+CGG 0.448517 3:-73938557 None:intergenic
CACCCAAGTAAGAAATCAAT+AGG 0.449484 3:-73937907 None:intergenic
TATTCTCAATCACAAGTTAT+GGG 0.451420 3:+73938332 MsG0380015702.01.T01:CDS
ATGTGTTAGGAAATGCTATT+GGG 0.455336 3:+73937978 MsG0380015702.01.T01:five_prime_UTR
TATGGGTGAGTCGGATGGGT+TGG 0.456554 3:+73938424 MsG0380015702.01.T01:CDS
CTGATTCCTATGCACCGAAC+AGG 0.458884 3:+73938486 MsG0380015702.01.T01:CDS
AACCTGGATTGAATTCTAGA+AGG 0.462269 3:-73937696 None:intergenic
AGCTGGAGAGAGAAGCAGCC+CGG 0.464666 3:+73942462 MsG0380015702.01.T01:CDS
TTCCTTCTAGAATTCAATCC+AGG 0.466624 3:+73937694 MsG0380015702.01.T01:five_prime_UTR
TCAAGAGAAAACCCTTGAAA+AGG 0.469166 3:+73941848 MsG0380015702.01.T01:CDS
AAAACCAGTAGCATAACCTT+TGG 0.469271 3:-73938372 None:intergenic
GCAATTAAAAGAGAGGGTAA+AGG 0.470443 3:-73937848 None:intergenic
TTCAATTTAACAACATCGAC+TGG 0.477317 3:-73938965 None:intergenic
CAACAATTTCAGCCAAAAGC+TGG 0.481637 3:+73939568 MsG0380015702.01.T01:CDS
GAATCAGAGAGCCACCTAGA+TGG 0.481644 3:+73941654 MsG0380015702.01.T01:CDS
GAGAACGATGGTGATGCTTA+GGG 0.483389 3:+73937644 MsG0380015702.01.T01:five_prime_UTR
TGGGTTGGGTAGCTCGGGGA+GGG 0.484405 3:+73938439 MsG0380015702.01.T01:CDS
TTGCTTCCTGTTCGGTGCAT+AGG 0.484773 3:-73938492 None:intergenic
GGGACAGAAAAGGCCTCAGC+TGG 0.486185 3:+73938727 MsG0380015702.01.T01:CDS
GGCTTGGTAAAAGTGTCGTT+TGG 0.491438 3:-73939316 None:intergenic
TCAGTCATAATTCTTTCAGC+AGG 0.491461 3:-73939343 None:intergenic
CCAAATGCCAGGCAATGAAC+TGG 0.491464 3:+73940341 MsG0380015702.01.T01:intron
AGTAATCCCGAAACTGGAAA+TGG 0.494331 3:+73941453 MsG0380015702.01.T01:CDS
AGAGGCAAAAGCTGCAGAAG+AGG 0.496737 3:+73942388 MsG0380015702.01.T01:CDS
CGGATGGGTTGGGTAGCTCG+GGG 0.497298 3:+73938435 MsG0380015702.01.T01:CDS
ATTGTCTAAAATGTCGGCTA+TGG 0.498102 3:+73938574 MsG0380015702.01.T01:CDS
AAACCAAAATTCTCAGAAGC+AGG 0.500145 3:-73938204 None:intergenic
TCTTCTTCTATCTTCTTCCC+AGG 0.503060 3:-73938025 None:intergenic
AGGAAGCAACTTGGTTTGAA+AGG 0.507274 3:+73938506 MsG0380015702.01.T01:CDS
CCAATCACCTTAGAACTAAG+AGG 0.507874 3:-73941288 None:intergenic
GCCAGGCAATGAACTGGTTG+AGG 0.509028 3:+73940347 MsG0380015702.01.T01:intron
TAGTTGATATGTGCAGTTGT+TGG 0.510508 3:+73938247 MsG0380015702.01.T01:five_prime_UTR
AACCTATTGATTTCTTACTT+GGG 0.511110 3:+73937905 MsG0380015702.01.T01:five_prime_UTR
GCAGAAATTGAGTCAACAGT+TGG 0.514082 3:+73939375 MsG0380015702.01.T01:CDS
GGTAAGAAAAGACCCCTGCC+AGG 0.515915 3:+73938788 MsG0380015702.01.T01:CDS
TATCTCCGTCGAGTGACATA+AGG 0.519054 3:+73938693 MsG0380015702.01.T01:CDS
CAATGTCATCAAACATCCAA+TGG 0.519130 3:+73939003 MsG0380015702.01.T01:CDS
ATTTGGTGGGATCAAGCTGC+AGG 0.519402 3:+73942697 MsG0380015702.01.T01:CDS
GAGGAGGACGTGGACATTGT+TGG 0.519589 3:+73940366 MsG0380015702.01.T01:CDS
CAACAGTTGGAGGATATGCT+TGG 0.520529 3:+73939388 MsG0380015702.01.T01:CDS
TCAGTATGGTGTCAGCAAAC+CGG 0.521023 3:-73941821 None:intergenic
TCATCCATGCAACCTTCTAA+AGG 0.522115 3:+73940209 MsG0380015702.01.T01:CDS
ATGATCATCAATGGATTTGG+TGG 0.523688 3:+73942683 MsG0380015702.01.T01:CDS
CGAGCCCAGATGATCATCAA+TGG 0.525171 3:+73942674 MsG0380015702.01.T01:CDS
TCTTTCAGCAGGTTCTGGCT+TGG 0.525862 3:-73939332 None:intergenic
GGGAGGGTGTTGCGTCTAAG+AGG 0.526449 3:+73941754 MsG0380015702.01.T01:CDS
GTCGAGCTTTATTAAGGAGC+CGG 0.526937 3:+73941802 MsG0380015702.01.T01:CDS
GTGAAGAGTAGGATAACATC+TGG 0.526957 3:+73939037 MsG0380015702.01.T01:CDS
GACATAAGGAGCTGCAGTGT+GGG 0.528436 3:+73938707 MsG0380015702.01.T01:CDS
TGCAGCTTCTTAATGAATCA+GGG 0.529324 3:+73940177 MsG0380015702.01.T01:intron
TAGAAATCCAATTGAAAACC+TGG 0.531465 3:-73937712 None:intergenic
ATACTCATTGTCTAAAATGT+CGG 0.531531 3:+73938568 MsG0380015702.01.T01:CDS
GGGACCACTACGCCCTGGCA+GGG 0.531672 3:-73938801 None:intergenic
CTATGAATTGCAGGAAAATG+TGG 0.532385 3:+73941392 MsG0380015702.01.T01:intron
CACATCATCAGCAAAATCCA+TGG 0.532779 3:-73939074 None:intergenic
AACGTGACCCTGAAAAGCTT+AGG 0.534483 3:+73942173 MsG0380015702.01.T01:CDS
TTTACCTTTAGAAGGTTGCA+TGG 0.540896 3:-73940213 None:intergenic
AGACTATGGGTGAGTCGGAT+GGG 0.541351 3:+73938420 MsG0380015702.01.T01:CDS
AAAGAGCAAAGTCGCATCGC+AGG 0.542643 3:+73939442 MsG0380015702.01.T01:CDS
ATGCTGTGCACATCATTGCC+AGG 0.543365 3:-73939133 None:intergenic
GAGACTATGGGTGAGTCGGA+TGG 0.543412 3:+73938419 MsG0380015702.01.T01:CDS
GGACCACTACGCCCTGGCAG+GGG 0.544331 3:-73938800 None:intergenic
AGAGAAAGAATTTGAAATCG+AGG 0.545941 3:+73938597 MsG0380015702.01.T01:CDS
AGCCAAAAGAAAGAGGGAGC+TGG 0.546575 3:+73942445 MsG0380015702.01.T01:CDS
GCTGCAGTGTGGGACAGAAA+AGG 0.548653 3:+73938717 MsG0380015702.01.T01:CDS
GTGATGAATGTTATTGCACC+TGG 0.548672 3:+73938007 MsG0380015702.01.T01:five_prime_UTR
GCACCGAACAGGAAGCAACT+TGG 0.552234 3:+73938497 MsG0380015702.01.T01:CDS
CAGCTGAAGCCAAAAGAAAG+AGG 0.552563 3:+73942438 MsG0380015702.01.T01:CDS
CTTGAGAGGAGGCAGAAGGA+AGG 0.553387 3:+73942211 MsG0380015702.01.T01:CDS
TGATATGGAGCCGACTGCAT+CGG 0.553491 3:+73938463 MsG0380015702.01.T01:CDS
GAGCAAAGTCGCATCGCAGG+AGG 0.555548 3:+73939445 MsG0380015702.01.T01:CDS
GAAAGAAAATTGAAGATCGA+AGG 0.558943 3:-73937762 None:intergenic
AACGAACGATGATGAAATTG+AGG 0.559453 3:+73939471 MsG0380015702.01.T01:CDS
CGTCATGTGGTAGAGACTAT+GGG 0.559524 3:+73938407 MsG0380015702.01.T01:CDS
TGATGTGCACAGCATAGCAT+TGG 0.560382 3:+73939141 MsG0380015702.01.T01:CDS
GCAAAATCTATGGGAACAGT+TGG 0.560604 3:-73938287 None:intergenic
TTTCATGATTCACATTGCGT+TGG 0.565768 3:+73937667 MsG0380015702.01.T01:five_prime_UTR
AATGTAGCATATGAAGCCAT+TGG 0.567901 3:-73938875 None:intergenic
TTCACAGTACCCAAATCCAT+TGG 0.567942 3:-73939019 None:intergenic
AGACAAGTGCACCCTTCACT+GGG 0.568248 3:+73938137 MsG0380015702.01.T01:five_prime_UTR
TGGTAAATATTCAAATCCCA+TGG 0.569156 3:+73939057 MsG0380015702.01.T01:CDS
AAAATGATAAAACCCAGTGA+AGG 0.570692 3:-73938149 None:intergenic
TGTTCCTGAGTTTCGTCATG+TGG 0.571126 3:+73938394 MsG0380015702.01.T01:CDS
CTGTGTTGGCTCTCCAGCTG+AGG 0.572376 3:-73938740 None:intergenic
TATGCACTAACACGAACCAC+TGG 0.574062 3:-73940504 None:intergenic
AATCCCGAAACTGGAAATGG+TGG 0.578598 3:+73941456 MsG0380015702.01.T01:CDS
AGACCCCTGCCAGGGCGTAG+TGG 0.578757 3:+73938797 MsG0380015702.01.T01:CDS
ATTTGGGTACTGTGAAGAGT+AGG 0.581358 3:+73939026 MsG0380015702.01.T01:CDS
GTCTTGGGACCACTACGCCC+TGG 0.583209 3:-73938806 None:intergenic
TCTTAGTTCTAAGGTGATTG+GGG 0.584929 3:+73941290 MsG0380015702.01.T01:CDS
TGAACTGGTTGAGGAGGACG+TGG 0.585832 3:+73940356 MsG0380015702.01.T01:CDS
AAATGATAAAACCCAGTGAA+GGG 0.591813 3:-73938148 None:intergenic
AAATCCATTGATGATCATCT+GGG 0.591908 3:-73942678 None:intergenic
AATGAAGCAATTAAAAGAGA+GGG 0.597629 3:-73937854 None:intergenic
GGGACACGATGATCAATGAC+AGG 0.598469 3:-73939214 None:intergenic
ATGCTTGCCGTATACTGTGT+TGG 0.598736 3:-73938754 None:intergenic
TACACCAAGTTTCAAAGAGG+AGG 0.599655 3:+73942651 MsG0380015702.01.T01:CDS
AAATGAAGCAATTAAAAGAG+AGG 0.602290 3:-73937855 None:intergenic
GAAATTGAGTCAACAGTTGG+AGG 0.604172 3:+73939378 MsG0380015702.01.T01:CDS
TGATCATCAATGGATTTGGT+GGG 0.605717 3:+73942684 MsG0380015702.01.T01:CDS
GGAGGATAATTTGAATTAGG+CGG 0.606500 3:-73940399 None:intergenic
AGAACTTGAGAGGAGGCAGA+AGG 0.608648 3:+73942207 MsG0380015702.01.T01:CDS
AGCAAAGTCGCATCGCAGGA+GGG 0.609818 3:+73939446 MsG0380015702.01.T01:CDS
GAAAGCTCGATTGCAAGCAG+AGG 0.612062 3:+73942370 MsG0380015702.01.T01:CDS
TAGGAATCAGCCGATGCAGT+CGG 0.613535 3:-73938473 None:intergenic
TCTACCACATGACGAAACTC+AGG 0.614639 3:-73938398 None:intergenic
CTTGACTTACGATCAAAACA+GGG 0.615865 3:+73941422 MsG0380015702.01.T01:CDS
ACACAGTATACGGCAAGCAT+CGG 0.617021 3:+73938757 MsG0380015702.01.T01:CDS
AGCTGAAGCCAAAAGAAAGA+GGG 0.617838 3:+73942439 MsG0380015702.01.T01:CDS
CGGCAAGCATCGGTGCCACA+TGG 0.620715 3:+73938767 MsG0380015702.01.T01:CDS
TTGAGCGAGAAGAACTTGAG+AGG 0.622715 3:+73942197 MsG0380015702.01.T01:CDS
ACATCATCAGCAAAATCCAT+GGG 0.623227 3:-73939073 None:intergenic
ATTCTCAATCACAAGTTATG+GGG 0.631785 3:+73938333 MsG0380015702.01.T01:CDS
AGGCAATGAACTGGTTGAGG+AGG 0.632610 3:+73940350 MsG0380015702.01.T01:intron
ATCCCGAAACTGGAAATGGT+GGG 0.632988 3:+73941457 MsG0380015702.01.T01:CDS
AAATCAAGAAAATACTCCAA+AGG 0.633873 3:+73938356 MsG0380015702.01.T01:CDS
AGCGAGAAGAACTTGAGAGG+AGG 0.636218 3:+73942200 MsG0380015702.01.T01:CDS
TTTGGTGGGATCAAGCTGCA+GGG 0.639434 3:+73942698 MsG0380015702.01.T01:CDS
TTGCAGGAAAATGTGGGACC+TGG 0.639784 3:+73941399 MsG0380015702.01.T01:intron
AGCTGGACAGTGTGAAACAG+AGG 0.640132 3:+73939585 MsG0380015702.01.T01:CDS
GTAAGAAAAGACCCCTGCCA+GGG 0.640414 3:+73938789 MsG0380015702.01.T01:CDS
TATGAATTGCAGGAAAATGT+GGG 0.641252 3:+73941393 MsG0380015702.01.T01:intron
TTTCAAGCTTACCATCTAGG+TGG 0.643818 3:-73941665 None:intergenic
GAGGACGTGGACATTGTTGG+TGG 0.643908 3:+73940369 MsG0380015702.01.T01:CDS
TGAAAGAATTATGACTGACA+TGG 0.647393 3:+73939348 MsG0380015702.01.T01:CDS
AAATACACCAAGTTTCAAAG+AGG 0.662470 3:+73942648 MsG0380015702.01.T01:CDS
GCAATGACTTATAATCCACC+TGG 0.664500 3:+73939115 MsG0380015702.01.T01:CDS
CAAATTGATGAGACATCAGA+CGG 0.667504 3:-73938925 None:intergenic
AAGCTTACGTAATTTGAACA+GGG 0.669286 3:-73939521 None:intergenic
TGACATAAGGAGCTGCAGTG+TGG 0.675265 3:+73938706 MsG0380015702.01.T01:CDS
GGTAGAGACTATGGGTGAGT+CGG 0.677195 3:+73938415 MsG0380015702.01.T01:CDS
CAGCTCCTTATGTCACTCGA+CGG 0.678805 3:-73938698 None:intergenic
GAATCTGGCTCATCATCCAG+TGG 0.679363 3:+73940488 MsG0380015702.01.T01:CDS
TGACTTACGATCAAAACAGG+GGG 0.682999 3:+73941424 MsG0380015702.01.T01:CDS
CTTGGTTTGAAAGGTAACGA+CGG 0.683657 3:+73938515 MsG0380015702.01.T01:CDS
GGCTCCTTAATAAAGCTCGA+CGG 0.684386 3:-73941800 None:intergenic
AAGCTGCAGAAGAGGCCCGG+AGG 0.701414 3:+73942396 MsG0380015702.01.T01:CDS
TGATGAATGTTATTGCACCT+GGG 0.725156 3:+73938008 MsG0380015702.01.T01:five_prime_UTR
TTGACTTACGATCAAAACAG+GGG 0.729127 3:+73941423 MsG0380015702.01.T01:CDS
TCTGTCACAGAAGAGAACGA+TGG 0.732759 3:+73937632 None:intergenic
CTGTGCACATCATTGCCAGG+TGG 0.741938 3:-73939130 None:intergenic
GACTTACGATCAAAACAGGG+GGG 0.756673 3:+73941425 MsG0380015702.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAGTAAAATAGTTTA+AGG - Chr3:73940668-73940687 None:intergenic 10.0%
!!! ATTCATTTATGTAATAATTT+TGG + Chr3:73940719-73940738 MsG0380015702.01.T01:intron 10.0%
!!! ATTTTTTTTTTCTTTCTAAA+TGG + Chr3:73942267-73942286 MsG0380015702.01.T01:intron 10.0%
!! AGAAAGAAAAAAAAAATACA+AGG - Chr3:73942264-73942283 None:intergenic 15.0%
!! ATTGTTAAAATTTGACATTT+AGG + Chr3:73939844-73939863 MsG0380015702.01.T01:intron 15.0%
!!! CATTTAAAAATTTTATTGCA+TGG + Chr3:73940020-73940039 MsG0380015702.01.T01:intron 15.0%
!!! TTATACCTAAAATATTGATT+AGG - Chr3:73940700-73940719 None:intergenic 15.0%
!! ACATCCAAAAGAAATAAAAA+TGG - Chr3:73940598-73940617 None:intergenic 20.0%
!! GTTATCAAAATAACTGAAAT+TGG + Chr3:73938101-73938120 MsG0380015702.01.T01:five_prime_UTR 20.0%
!! TGAATTTATAAGAGAAATAC+TGG - Chr3:73941086-73941105 None:intergenic 20.0%
!! TTCATATAAAACTTGCATAA+TGG - Chr3:73942115-73942134 None:intergenic 20.0%
!! TTGTTGTAATTGTTGAAATT+TGG + Chr3:73939997-73940016 MsG0380015702.01.T01:intron 20.0%
!! TTTCATGAATTAACGAAAAT+TGG - Chr3:73937827-73937846 None:intergenic 20.0%
!!! AACTCCATTTTTATTTCTTT+TGG + Chr3:73940591-73940610 MsG0380015702.01.T01:intron 20.0%
!!! ATTTTTATTTCTTTTGGATG+TGG + Chr3:73940597-73940616 MsG0380015702.01.T01:intron 20.0%
!!! CGATAAAGTTTAGATTTTTT+TGG + Chr3:73938063-73938082 MsG0380015702.01.T01:five_prime_UTR 20.0%
!!! CTATTTTACTTTTTTTTTCC+CGG + Chr3:73940672-73940691 MsG0380015702.01.T01:intron 20.0%
!!! GTTTTATCATAAACCATATT+TGG - Chr3:73939919-73939938 None:intergenic 20.0%
!!! TCATTTTTTGCGTTAAAATT+TGG + Chr3:73938165-73938184 MsG0380015702.01.T01:five_prime_UTR 20.0%
!!! TGGTTAATTTTAATGCATTA+TGG + Chr3:73941026-73941045 MsG0380015702.01.T01:intron 20.0%
! AAAAATATACAAGTTCCTAC+TGG - Chr3:73940850-73940869 None:intergenic 25.0%
! AAATCAAGAAAATACTCCAA+AGG + Chr3:73938356-73938375 MsG0380015702.01.T01:CDS 25.0%
! AAATGAAGCAATTAAAAGAG+AGG - Chr3:73937858-73937877 None:intergenic 25.0%
! AAGAAACTATAATATGCACA+TGG - Chr3:73941508-73941527 None:intergenic 25.0%
! AAGAAATAAAAATGGAGTTC+TGG - Chr3:73940590-73940609 None:intergenic 25.0%
! AATAACTGAAATTGGTCAAT+TGG + Chr3:73938109-73938128 MsG0380015702.01.T01:five_prime_UTR 25.0%
! AATGAAGCAATTAAAAGAGA+GGG - Chr3:73937857-73937876 None:intergenic 25.0%
! AGAAATAAAAATGGAGTTCT+GGG - Chr3:73940589-73940608 None:intergenic 25.0%
! ATAACTGAAATTGGTCAATT+GGG + Chr3:73938110-73938129 MsG0380015702.01.T01:five_prime_UTR 25.0%
! ATGTGCATATTATAGTTTCT+TGG + Chr3:73941507-73941526 MsG0380015702.01.T01:intron 25.0%
! ATTACACTTTCTACATAAGT+AGG - Chr3:73939256-73939275 None:intergenic 25.0%
! ATTTGACATTTAGGAACTAT+AGG + Chr3:73939853-73939872 MsG0380015702.01.T01:intron 25.0%
! CAGGAAGCTTAATTTATATA+TGG - Chr3:73942524-73942543 None:intergenic 25.0%
! CATATATAAATTAAGCTTCC+TGG + Chr3:73942522-73942541 MsG0380015702.01.T01:intron 25.0%
! CTGCATAAAATGATAGTTTA+CGG - Chr3:73940096-73940115 None:intergenic 25.0%
! CTTGAAAATTCATAGAGATT+TGG - Chr3:73940644-73940663 None:intergenic 25.0%
! TATTCTCAATCACAAGTTAT+GGG + Chr3:73938332-73938351 MsG0380015702.01.T01:CDS 25.0%
! TATTGCTAAAGTAGTAAATC+TGG + Chr3:73942045-73942064 MsG0380015702.01.T01:intron 25.0%
! TGTTGTTAAATTGAACATTC+CGG + Chr3:73938973-73938992 MsG0380015702.01.T01:CDS 25.0%
! TTCAATTGGATTTCTACTTA+GGG + Chr3:73937719-73937738 MsG0380015702.01.T01:five_prime_UTR 25.0%
! TTCATTTACTCAAATGTGTT+AGG + Chr3:73937965-73937984 MsG0380015702.01.T01:five_prime_UTR 25.0%
! TTGGATAAAAATGAGAAGAA+TGG - Chr3:73937808-73937827 None:intergenic 25.0%
! TTTCAATTGGATTTCTACTT+AGG + Chr3:73937718-73937737 MsG0380015702.01.T01:five_prime_UTR 25.0%
!! AAATTTAGAGTTTAATGAGC+TGG + Chr3:73939891-73939910 MsG0380015702.01.T01:intron 25.0%
!! AAGACAAAAAAAAGTATGTC+TGG + Chr3:73938824-73938843 MsG0380015702.01.T01:CDS 25.0%
!! ACTTCATGCTGTAATATTTT+AGG + Chr3:73941732-73941751 MsG0380015702.01.T01:intron 25.0%
!! ATACTCATTGTCTAAAATGT+CGG + Chr3:73938568-73938587 MsG0380015702.01.T01:CDS 25.0%
!! CTTCATGCTGTAATATTTTA+GGG + Chr3:73941733-73941752 MsG0380015702.01.T01:intron 25.0%
!! TAATGAATTTTTCTGTATGC+TGG + Chr3:73941172-73941191 MsG0380015702.01.T01:intron 25.0%
!! TTGATGACATTGAAATAATC+CGG - Chr3:73938995-73939014 None:intergenic 25.0%
!!! AACCTATTGATTTCTTACTT+GGG + Chr3:73937905-73937924 MsG0380015702.01.T01:five_prime_UTR 25.0%
!!! AGACATACTTTTTTTTGTCT+TGG - Chr3:73938825-73938844 None:intergenic 25.0%
!!! CGGTTTTTTAACAAAGAAAA+TGG - Chr3:73941372-73941391 None:intergenic 25.0%
!!! GACATACTTTTTTTTGTCTT+GGG - Chr3:73938824-73938843 None:intergenic 25.0%
!!! GCTAAATTGAAAGTATCATA+AGG - Chr3:73939818-73939837 None:intergenic 25.0%
!!! GTCATTTTCTTCTTTTTTGT+GGG - Chr3:73939295-73939314 None:intergenic 25.0%
!!! TCATTTTCTTCTTTTTTGTG+GGG - Chr3:73939294-73939313 None:intergenic 25.0%
!!! TGTCATTTTCTTCTTTTTTG+TGG - Chr3:73939296-73939315 None:intergenic 25.0%
!!! TTCATGCTGTAATATTTTAG+GGG + Chr3:73941734-73941753 MsG0380015702.01.T01:intron 25.0%
!!! TTTTTTGCGTTAAAATTTGG+AGG + Chr3:73938168-73938187 MsG0380015702.01.T01:five_prime_UTR 25.0%
AAAATGATAAAACCCAGTGA+AGG - Chr3:73938152-73938171 None:intergenic 30.0%
AAAATTGACACTGAAACATC+TGG - Chr3:73940758-73940777 None:intergenic 30.0%
AAATACACCAAGTTTCAAAG+AGG + Chr3:73942648-73942667 MsG0380015702.01.T01:CDS 30.0%
AAATGATAAAACCCAGTGAA+GGG - Chr3:73938151-73938170 None:intergenic 30.0%
AAGAAATCAAGAATGGAATC+AGG - Chr3:73939421-73939440 None:intergenic 30.0%
AAGCTTACGTAATTTGAACA+GGG - Chr3:73939524-73939543 None:intergenic 30.0%
AATGAGCAAGAAAGCAATAA+AGG - Chr3:73941559-73941578 None:intergenic 30.0%
AATGTGTTAGGAAATGCTAT+TGG + Chr3:73937977-73937996 MsG0380015702.01.T01:five_prime_UTR 30.0%
AGTATGAATTCGAACATTGT+TGG + Chr3:73938668-73938687 MsG0380015702.01.T01:CDS 30.0%
AGTGGAGGATAATTTGAATT+AGG - Chr3:73940405-73940424 None:intergenic 30.0%
ATGTGTTAGGAAATGCTATT+GGG + Chr3:73937978-73937997 MsG0380015702.01.T01:five_prime_UTR 30.0%
ATTCTCAATCACAAGTTATG+GGG + Chr3:73938333-73938352 MsG0380015702.01.T01:CDS 30.0%
CAACTATCTCATTAACAAAG+CGG + Chr3:73940805-73940824 MsG0380015702.01.T01:intron 30.0%
CAATAATAGAAATTCCCTAC+TGG - Chr3:73942030-73942049 None:intergenic 30.0%
CAATTAAAAGAGAGGGTAAA+GGG - Chr3:73937850-73937869 None:intergenic 30.0%
CTCTTTCAAGAAATCAAGAA+TGG - Chr3:73939428-73939447 None:intergenic 30.0%
GAAAGAAAATTGAAGATCGA+AGG - Chr3:73937765-73937784 None:intergenic 30.0%
GAACTATAGGAGAAACTATT+AGG + Chr3:73939866-73939885 MsG0380015702.01.T01:intron 30.0%
GACAATGAGTATAGTTGAAA+CGG - Chr3:73938560-73938579 None:intergenic 30.0%
GTACACAATTTACCTTTAGA+AGG - Chr3:73940224-73940243 None:intergenic 30.0%
GTATTCTCAATCACAAGTTA+TGG + Chr3:73938331-73938350 MsG0380015702.01.T01:CDS 30.0%
GTGTATACTCAATAAGTTGT+TGG + Chr3:73940998-73941017 MsG0380015702.01.T01:intron 30.0%
GTTGTTGGAATTTCATCTTA+TGG + Chr3:73938262-73938281 MsG0380015702.01.T01:exon 30.0%
TAGAAATCCAATTGAAAACC+TGG - Chr3:73937715-73937734 None:intergenic 30.0%
TATGAATTGCAGGAAAATGT+GGG + Chr3:73941393-73941412 MsG0380015702.01.T01:intron 30.0%
TGAAAGAATTATGACTGACA+TGG + Chr3:73939348-73939367 MsG0380015702.01.T01:CDS 30.0%
TGGTAAATATTCAAATCCCA+TGG + Chr3:73939057-73939076 MsG0380015702.01.T01:CDS 30.0%
TGTATAGATTCAACTAACCT+GGG + Chr3:73941589-73941608 MsG0380015702.01.T01:intron 30.0%
TTCAATTTAACAACATCGAC+TGG - Chr3:73938968-73938987 None:intergenic 30.0%
TTGTATAGATTCAACTAACC+TGG + Chr3:73941588-73941607 MsG0380015702.01.T01:intron 30.0%
TTGTGATTGAGAATACTTTC+TGG - Chr3:73938327-73938346 None:intergenic 30.0%
! AAATCCATTGATGATCATCT+GGG - Chr3:73942681-73942700 None:intergenic 30.0%
! AGAGAAAGAATTTGAAATCG+AGG + Chr3:73938597-73938616 MsG0380015702.01.T01:CDS 30.0%
! ATCAAACATCCAATGGATTT+GGG + Chr3:73939010-73939029 MsG0380015702.01.T01:CDS 30.0%
! ATTCAATCCAGGTTTTCAAT+TGG + Chr3:73937705-73937724 MsG0380015702.01.T01:five_prime_UTR 30.0%
! ATTTGAAATCGAGGTTGATT+TGG + Chr3:73938606-73938625 MsG0380015702.01.T01:CDS 30.0%
! ATTTGTTGCAGTAATAGACT+AGG + Chr3:73941908-73941927 MsG0380015702.01.T01:intron 30.0%
! CAATTTTCTTTCGAGATCTA+GGG + Chr3:73937773-73937792 MsG0380015702.01.T01:five_prime_UTR 30.0%
! CGTAAACTATCATTTTATGC+AGG + Chr3:73940094-73940113 MsG0380015702.01.T01:intron 30.0%
! CTAAAATATTGATTAGGAGC+CGG - Chr3:73940694-73940713 None:intergenic 30.0%
! CTTAGTAAAGCCTTTGAAAA+AGG + Chr3:73939166-73939185 MsG0380015702.01.T01:CDS 30.0%
! TAAAATATTGATTAGGAGCC+GGG - Chr3:73940693-73940712 None:intergenic 30.0%
! TCAATTTTCTTTCGAGATCT+AGG + Chr3:73937772-73937791 MsG0380015702.01.T01:five_prime_UTR 30.0%
! TTTGAAATCGAGGTTGATTT+GGG + Chr3:73938607-73938626 MsG0380015702.01.T01:CDS 30.0%
! TTTTGTCCAGCAAAATCTAT+GGG - Chr3:73938299-73938318 None:intergenic 30.0%
!! ATTTTCTTCTTTTTTGTGGG+GGG - Chr3:73939292-73939311 None:intergenic 30.0%
!! CATTTTCTTCTTTTTTGTGG+GGG - Chr3:73939293-73939312 None:intergenic 30.0%
!! GAACCTATTGATTTCTTACT+TGG + Chr3:73937904-73937923 MsG0380015702.01.T01:five_prime_UTR 30.0%
!! TCAATAAGTTGTTGGTTTGT+TGG + Chr3:73941006-73941025 MsG0380015702.01.T01:intron 30.0%
!! TCTACATAAGTAGGTTTTGA+AGG - Chr3:73939247-73939266 None:intergenic 30.0%
!! TTTTGGAAGATCTAGAAATG+TGG + Chr3:73942611-73942630 MsG0380015702.01.T01:intron 30.0%
!!! ATTTTTCAAGCTTACCATCT+AGG - Chr3:73941671-73941690 None:intergenic 30.0%
AAAAAACCGCTATGAATTGC+AGG + Chr3:73941383-73941402 MsG0380015702.01.T01:intron 35.0%
AAAACCAGTAGCATAACCTT+TGG - Chr3:73938375-73938394 None:intergenic 35.0%
AAACCAAAATTCTCAGAAGC+AGG - Chr3:73938207-73938226 None:intergenic 35.0%
AACCTGGATTGAATTCTAGA+AGG - Chr3:73937699-73937718 None:intergenic 35.0%
AACGAACGATGATGAAATTG+AGG + Chr3:73939471-73939490 MsG0380015702.01.T01:CDS 35.0%
AATGGCAGAACTTTCATGAA+AGG - Chr3:73942097-73942116 None:intergenic 35.0%
AATGTAGCATATGAAGCCAT+TGG - Chr3:73938878-73938897 None:intergenic 35.0%
AATGTTGACACTTGTACCAT+AGG - Chr3:73940288-73940307 None:intergenic 35.0%
ACATCATCAGCAAAATCCAT+GGG - Chr3:73939076-73939095 None:intergenic 35.0%
ACTACTTGAATCTGAATCTG+TGG - Chr3:73941229-73941248 None:intergenic 35.0%
AGAAGACTATAAGCATATCC+TGG - Chr3:73940550-73940569 None:intergenic 35.0%
ATAATTCTTTCAGCAGGTTC+TGG - Chr3:73939340-73939359 None:intergenic 35.0%
ATCTCATTAACAAAGCGGTA+TGG + Chr3:73940810-73940829 MsG0380015702.01.T01:intron 35.0%
ATGTTGACACTTGTACCATA+GGG - Chr3:73940287-73940306 None:intergenic 35.0%
CAAATTGATGAGACATCAGA+CGG - Chr3:73938928-73938947 None:intergenic 35.0%
CAATGTCATCAAACATCCAA+TGG + Chr3:73939003-73939022 MsG0380015702.01.T01:CDS 35.0%
CACCCAAGTAAGAAATCAAT+AGG - Chr3:73937910-73937929 None:intergenic 35.0%
CATTAAAATTGACAAGCGTC+TGG - Chr3:73941157-73941176 None:intergenic 35.0%
CTATAAGCATATCCTGGAAT+CGG - Chr3:73940544-73940563 None:intergenic 35.0%
CTATGAATTGCAGGAAAATG+TGG + Chr3:73941392-73941411 MsG0380015702.01.T01:intron 35.0%
CTCTCTGATTCAATAGTATC+TGG - Chr3:73941645-73941664 None:intergenic 35.0%
CTTGACTTACGATCAAAACA+GGG + Chr3:73941422-73941441 MsG0380015702.01.T01:CDS 35.0%
GAAGCTTACGTAATTTGAAC+AGG - Chr3:73939525-73939544 None:intergenic 35.0%
GAGTGAGAGGAATATCATTA+AGG - Chr3:73940786-73940805 None:intergenic 35.0%
GATGTCTCATCAATTTGGTT+GGG + Chr3:73938931-73938950 MsG0380015702.01.T01:CDS 35.0%
GCAATTAAAAGAGAGGGTAA+AGG - Chr3:73937851-73937870 None:intergenic 35.0%
GGAGGATAATTTGAATTAGG+CGG - Chr3:73940402-73940421 None:intergenic 35.0%
TAAACACGCATATACAAGTG+AGG - Chr3:73940069-73940088 None:intergenic 35.0%
TAATGAGATAGTTGAGTGAG+AGG - Chr3:73940799-73940818 None:intergenic 35.0%
TAATGAGCTGGATCCAAATA+TGG + Chr3:73939903-73939922 MsG0380015702.01.T01:intron 35.0%
TACGAAAGCCCATAAAGTTT+GGG - Chr3:73941484-73941503 None:intergenic 35.0%
TCAAGAGAAAACCCTTGAAA+AGG + Chr3:73941848-73941867 MsG0380015702.01.T01:CDS 35.0%
TCAGATTCAAGTAGTTCATC+TGG + Chr3:73941234-73941253 MsG0380015702.01.T01:CDS 35.0%
TCAGTCATAATTCTTTCAGC+AGG - Chr3:73939346-73939365 None:intergenic 35.0%
TCCACTAGAATCGAAAAAGA+TGG + Chr3:73940419-73940438 MsG0380015702.01.T01:CDS 35.0%
TGATGAATGTTATTGCACCT+GGG + Chr3:73938008-73938027 MsG0380015702.01.T01:five_prime_UTR 35.0%
TGATGTCTCATCAATTTGGT+TGG + Chr3:73938930-73938949 MsG0380015702.01.T01:CDS 35.0%
TGCAGCTTCTTAATGAATCA+GGG + Chr3:73940177-73940196 MsG0380015702.01.T01:intron 35.0%
TTACGAAAGCCCATAAAGTT+TGG - Chr3:73941485-73941504 None:intergenic 35.0%
TTATCTGACTGTTGCAATTG+TGG + Chr3:73941201-73941220 MsG0380015702.01.T01:intron 35.0%
TTCAATTCCAACTTGATCTC+AGG + Chr3:73942144-73942163 MsG0380015702.01.T01:intron 35.0%
TTGACTTACGATCAAAACAG+GGG + Chr3:73941423-73941442 MsG0380015702.01.T01:CDS 35.0%
TTTCATGATTCACATTGCGT+TGG + Chr3:73937667-73937686 MsG0380015702.01.T01:five_prime_UTR 35.0%
TTTCTCTTGAGCTTTCAGTA+TGG - Chr3:73941838-73941857 None:intergenic 35.0%
TTTCTTTCAGACATCACATC+TGG + Chr3:73940949-73940968 MsG0380015702.01.T01:intron 35.0%
TTTGATATGTTTCCGATTCC+AGG + Chr3:73940529-73940548 MsG0380015702.01.T01:intron 35.0%
! ATGATCATCAATGGATTTGG+TGG + Chr3:73942683-73942702 MsG0380015702.01.T01:CDS 35.0%
! ATTGTCTAAAATGTCGGCTA+TGG + Chr3:73938574-73938593 MsG0380015702.01.T01:CDS 35.0%
! CAAATCCATTGATGATCATC+TGG - Chr3:73942682-73942701 None:intergenic 35.0%
! CAGATGATCATCAATGGATT+TGG + Chr3:73942680-73942699 MsG0380015702.01.T01:CDS 35.0%
! CATAGATTTTGCTGGACAAA+AGG + Chr3:73938298-73938317 MsG0380015702.01.T01:CDS 35.0%
! CATCAAACATCCAATGGATT+TGG + Chr3:73939009-73939028 MsG0380015702.01.T01:CDS 35.0%
! CATTTTCCTGCAATTCATAG+CGG - Chr3:73941392-73941411 None:intergenic 35.0%
! CCCTTAACAAACCTTTTCAA+GGG - Chr3:73941862-73941881 None:intergenic 35.0%
! CGGCTCCTAATCAATATTTT+AGG + Chr3:73940692-73940711 MsG0380015702.01.T01:intron 35.0%
! CTTTTGTCCAGCAAAATCTA+TGG - Chr3:73938300-73938319 None:intergenic 35.0%
! GCTTCTTGATGATTATTTGC+TGG + Chr3:73939540-73939559 MsG0380015702.01.T01:CDS 35.0%
! GGCATTTGGAGTGAAAATAA+AGG - Chr3:73940330-73940349 None:intergenic 35.0%
! GTAAAGCCTTTGAAAAAGGA+TGG + Chr3:73939170-73939189 MsG0380015702.01.T01:CDS 35.0%
! TAGTTGATATGTGCAGTTGT+TGG + Chr3:73938247-73938266 MsG0380015702.01.T01:five_prime_UTR 35.0%
! TGATCATCAATGGATTTGGT+GGG + Chr3:73942684-73942703 MsG0380015702.01.T01:CDS 35.0%
! TTATTTTCACTCCAAATGCC+AGG + Chr3:73940330-73940349 MsG0380015702.01.T01:intron 35.0%
! TTTACCTTTAGAAGGTTGCA+TGG - Chr3:73940216-73940235 None:intergenic 35.0%
! TTTTCATCCTGAGATCAAGT+TGG - Chr3:73942154-73942173 None:intergenic 35.0%
!! ACCCTTGAAAAGGTTTGTTA+AGG + Chr3:73941858-73941877 MsG0380015702.01.T01:intron 35.0%
!! ATGCTGTAATATTTTAGGGG+AGG + Chr3:73941737-73941756 MsG0380015702.01.T01:intron 35.0%
!! ATTCCTGCTTCTGAGAATTT+TGG + Chr3:73938201-73938220 MsG0380015702.01.T01:five_prime_UTR 35.0%
!! CCCTTGAAAAGGTTTGTTAA+GGG + Chr3:73941859-73941878 MsG0380015702.01.T01:intron 35.0%
!! CCTTGAAAAGGTTTGTTAAG+GGG + Chr3:73941860-73941879 MsG0380015702.01.T01:intron 35.0%
!! CTCTTAGTTCTAAGGTGATT+GGG + Chr3:73941289-73941308 MsG0380015702.01.T01:CDS 35.0%
!! CTTGAAAAGGTTTGTTAAGG+GGG + Chr3:73941861-73941880 MsG0380015702.01.T01:intron 35.0%
!! TCTTAGTTCTAAGGTGATTG+GGG + Chr3:73941290-73941309 MsG0380015702.01.T01:CDS 35.0%
!! TGCTGTAATATTTTAGGGGA+GGG + Chr3:73941738-73941757 MsG0380015702.01.T01:intron 35.0%
!! TTCCTTCTAGAATTCAATCC+AGG + Chr3:73937694-73937713 MsG0380015702.01.T01:five_prime_UTR 35.0%
!! TTGAAAAGGTTTGTTAAGGG+GGG + Chr3:73941862-73941881 MsG0380015702.01.T01:intron 35.0%
!!! ATCTTTTTCGATTCTAGTGG+AGG - Chr3:73940420-73940439 None:intergenic 35.0%
!!! TCCATCTTTTTCGATTCTAG+TGG - Chr3:73940423-73940442 None:intergenic 35.0%
!!! TCTTGGCATGTTTTTTGATG+AGG + Chr3:73941524-73941543 MsG0380015702.01.T01:intron 35.0%
!!! TTGTCGATTTTCTACTTGCT+TGG + Chr3:73941113-73941132 MsG0380015702.01.T01:intron 35.0%
AAACCAAGTTGCTTCCTGTT+CGG - Chr3:73938503-73938522 None:intergenic 40.0%
AGCAAGAAAGCAATAAAGGC+GGG - Chr3:73941555-73941574 None:intergenic 40.0%
AGCTGAAGCCAAAAGAAAGA+GGG + Chr3:73942439-73942458 MsG0380015702.01.T01:CDS 40.0%
AGTAATCCCGAAACTGGAAA+TGG + Chr3:73941453-73941472 MsG0380015702.01.T01:CDS 40.0%
CAACAATTTCAGCCAAAAGC+TGG + Chr3:73939568-73939587 MsG0380015702.01.T01:CDS 40.0%
CACATCATCAGCAAAATCCA+TGG - Chr3:73939077-73939096 None:intergenic 40.0%
CCAATCACCTTAGAACTAAG+AGG - Chr3:73941291-73941310 None:intergenic 40.0%
CGTCTGATGTCTCATCAATT+TGG + Chr3:73938926-73938945 MsG0380015702.01.T01:CDS 40.0%
GAAATTGAGTCAACAGTTGG+AGG + Chr3:73939378-73939397 MsG0380015702.01.T01:CDS 40.0%
GAGCAAGAAAGCAATAAAGG+CGG - Chr3:73941556-73941575 None:intergenic 40.0%
GCAAAATCTATGGGAACAGT+TGG - Chr3:73938290-73938309 None:intergenic 40.0%
GCAATGACTTATAATCCACC+TGG + Chr3:73939115-73939134 MsG0380015702.01.T01:CDS 40.0%
GCAGAAATTGAGTCAACAGT+TGG + Chr3:73939375-73939394 MsG0380015702.01.T01:CDS 40.0%
GCTTGACTTACGATCAAAAC+AGG + Chr3:73941421-73941440 MsG0380015702.01.T01:CDS 40.0%
GTGAAGAGTAGGATAACATC+TGG + Chr3:73939037-73939056 MsG0380015702.01.T01:CDS 40.0%
GTGATGAATGTTATTGCACC+TGG + Chr3:73938007-73938026 MsG0380015702.01.T01:five_prime_UTR 40.0%
GTGCAGCTTCTTAATGAATC+AGG + Chr3:73940176-73940195 MsG0380015702.01.T01:intron 40.0%
TACACCAAGTTTCAAAGAGG+AGG + Chr3:73942651-73942670 MsG0380015702.01.T01:CDS 40.0%
TACTCCAAAGGTTATGCTAC+TGG + Chr3:73938368-73938387 MsG0380015702.01.T01:CDS 40.0%
TCATCCATGCAACCTTCTAA+AGG + Chr3:73940209-73940228 MsG0380015702.01.T01:CDS 40.0%
TCTTCTTCTATCTTCTTCCC+AGG - Chr3:73938028-73938047 None:intergenic 40.0%
TGACTTACGATCAAAACAGG+GGG + Chr3:73941424-73941443 MsG0380015702.01.T01:CDS 40.0%
TTCACAGTACCCAAATCCAT+TGG - Chr3:73939022-73939041 None:intergenic 40.0%
TTCATGAAAGGCAGCAATGA+TGG - Chr3:73942085-73942104 None:intergenic 40.0%
TTGAAAGGTAACGACGGATA+TGG + Chr3:73938521-73938540 MsG0380015702.01.T01:CDS 40.0%
TTTCAAGCTTACCATCTAGG+TGG - Chr3:73941668-73941687 None:intergenic 40.0%
TTTCCAGTTTCGGGATTACT+AGG - Chr3:73941453-73941472 None:intergenic 40.0%
TTTGTTAAGGGGGGGTAATA+TGG + Chr3:73941871-73941890 MsG0380015702.01.T01:intron 40.0%
! ACTGTTCCCATAGATTTTGC+TGG + Chr3:73938290-73938309 MsG0380015702.01.T01:CDS 40.0%
! AGGAAGCAACTTGGTTTGAA+AGG + Chr3:73938506-73938525 MsG0380015702.01.T01:CDS 40.0%
! ATTTGGGTACTGTGAAGAGT+AGG + Chr3:73939026-73939045 MsG0380015702.01.T01:CDS 40.0%
! CAACGAGAGCTGTCAATTTT+TGG + Chr3:73942594-73942613 MsG0380015702.01.T01:intron 40.0%
! CCCCTTAACAAACCTTTTCA+AGG - Chr3:73941863-73941882 None:intergenic 40.0%
! CTTGGTTTGAAAGGTAACGA+CGG + Chr3:73938515-73938534 MsG0380015702.01.T01:CDS 40.0%
! GACAGGAATTTTCTTCTCGA+TGG - Chr3:73939200-73939219 None:intergenic 40.0%
! GCTCAATCCTAAGCTTTTCA+GGG - Chr3:73942183-73942202 None:intergenic 40.0%
! TTACATTTTGCAAAGCCTGC+CGG - Chr3:73942484-73942503 None:intergenic 40.0%
! TTTTGATCGTAAGTCAAGCC+AGG - Chr3:73941420-73941439 None:intergenic 40.0%
!! AAGCCTTATTCCACTAAGTG+GGG - Chr3:73939972-73939991 None:intergenic 40.0%
!! ACAGCTCTCGTTGATTTCAA+CGG - Chr3:73942587-73942606 None:intergenic 40.0%
!! ATTTGGTTTGTACGACAGCA+AGG - Chr3:73940627-73940646 None:intergenic 40.0%
!! CAAGCCTTATTCCACTAAGT+GGG - Chr3:73939973-73939992 None:intergenic 40.0%
!! CCTCTTAGTTCTAAGGTGAT+TGG + Chr3:73941288-73941307 MsG0380015702.01.T01:CDS 40.0%
!! GTCAGAACCTCTTAGTTCTA+AGG + Chr3:73941281-73941300 MsG0380015702.01.T01:CDS 40.0%
!! TCTACCGTCGAGCTTTATTA+AGG + Chr3:73941796-73941815 MsG0380015702.01.T01:CDS 40.0%
!! TGAAAAGGTTTGTTAAGGGG+GGG + Chr3:73941863-73941882 MsG0380015702.01.T01:intron 40.0%
!! TGGATTTTGCTGATGATGTG+AGG + Chr3:73939077-73939096 MsG0380015702.01.T01:CDS 40.0%
!! TTTGGTTTGTACGACAGCAA+GGG - Chr3:73940626-73940645 None:intergenic 40.0%
!!! GGACTTCCATCCTTTTTCAA+AGG - Chr3:73939179-73939198 None:intergenic 40.0%
!!! TAGGTTTTGAAGGCTCAGAT+GGG - Chr3:73939237-73939256 None:intergenic 40.0%
!!! TCTTTTTTGTGGGGGGAATT+GGG - Chr3:73939285-73939304 None:intergenic 40.0%
!!! TTCTTTTTTGTGGGGGGAAT+TGG - Chr3:73939286-73939305 None:intergenic 40.0%
AACGTGACCCTGAAAAGCTT+AGG + Chr3:73942173-73942192 MsG0380015702.01.T01:CDS 45.0%
AATCCCGAAACTGGAAATGG+TGG + Chr3:73941456-73941475 MsG0380015702.01.T01:CDS 45.0%
ACACAGTATACGGCAAGCAT+CGG + Chr3:73938757-73938776 MsG0380015702.01.T01:CDS 45.0%
ATCCCGAAACTGGAAATGGT+GGG + Chr3:73941457-73941476 MsG0380015702.01.T01:CDS 45.0%
ATGCTTGCCGTATACTGTGT+TGG - Chr3:73938757-73938776 None:intergenic 45.0%
CAAAGCGGTATGGTGTAAAG+TGG + Chr3:73940820-73940839 MsG0380015702.01.T01:intron 45.0%
CAACAGTTGGAGGATATGCT+TGG + Chr3:73939388-73939407 MsG0380015702.01.T01:CDS 45.0%
CAACCCCACTTAGTGGAATA+AGG + Chr3:73939966-73939985 MsG0380015702.01.T01:intron 45.0%
CAAGTGAGGATGTGCTTACA+CGG - Chr3:73940055-73940074 None:intergenic 45.0%
CAAGTGATGTTGCATCCCTA+TGG + Chr3:73940269-73940288 MsG0380015702.01.T01:intron 45.0%
CAGCTGAAGCCAAAAGAAAG+AGG + Chr3:73942438-73942457 MsG0380015702.01.T01:CDS 45.0%
CCACTTAGTGGAATAAGGCT+TGG + Chr3:73939971-73939990 MsG0380015702.01.T01:intron 45.0%
CGTCATGTGGTAGAGACTAT+GGG + Chr3:73938407-73938426 MsG0380015702.01.T01:CDS 45.0%
CTTATTCCACTAAGTGGGGT+TGG - Chr3:73939968-73939987 None:intergenic 45.0%
GACTAAACTAGCTGCAACTG+AGG - Chr3:73940911-73940930 None:intergenic 45.0%
GACTTACGATCAAAACAGGG+GGG + Chr3:73941425-73941444 MsG0380015702.01.T01:CDS 45.0%
GATCCTAGTAATCCCGAAAC+TGG + Chr3:73941447-73941466 MsG0380015702.01.T01:CDS 45.0%
GCTGTTCAGTGAAACATACC+AGG - Chr3:73942543-73942562 None:intergenic 45.0%
GGCTCCTTAATAAAGCTCGA+CGG - Chr3:73941803-73941822 None:intergenic 45.0%
TATCTCCGTCGAGTGACATA+AGG + Chr3:73938693-73938712 MsG0380015702.01.T01:CDS 45.0%
TATGCACTAACACGAACCAC+TGG - Chr3:73940507-73940526 None:intergenic 45.0%
TCCAAAAACTGCTGCACCAA+TGG + Chr3:73938859-73938878 MsG0380015702.01.T01:CDS 45.0%
TCGTCATGTGGTAGAGACTA+TGG + Chr3:73938406-73938425 MsG0380015702.01.T01:CDS 45.0%
TCTACCACATGACGAAACTC+AGG - Chr3:73938401-73938420 None:intergenic 45.0%
TGAACAGCTCTGTTTGCAGA+TGG + Chr3:73942555-73942574 MsG0380015702.01.T01:intron 45.0%
TGATGTGCACAGCATAGCAT+TGG + Chr3:73939141-73939160 MsG0380015702.01.T01:CDS 45.0%
TGGAGAGCCAACACAGTATA+CGG + Chr3:73938747-73938766 MsG0380015702.01.T01:CDS 45.0%
TGTTCCTGAGTTTCGTCATG+TGG + Chr3:73938394-73938413 MsG0380015702.01.T01:CDS 45.0%
TTGAGCGAGAAGAACTTGAG+AGG + Chr3:73942197-73942216 MsG0380015702.01.T01:CDS 45.0%
TTGTCTCTGTCTCACCAGTA+GGG + Chr3:73942013-73942032 MsG0380015702.01.T01:intron 45.0%
TTTGTCTCTGTCTCACCAGT+AGG + Chr3:73942012-73942031 MsG0380015702.01.T01:intron 45.0%
! AGAGAACGATGGTGATGCTT+AGG + Chr3:73937643-73937662 MsG0380015702.01.T01:five_prime_UTR 45.0%
! AGCAGCTCTAGTAGTGAATC+TGG + Chr3:73940473-73940492 MsG0380015702.01.T01:CDS 45.0%
! AGGGGTCTTTTCTTACCATG+TGG - Chr3:73938785-73938804 None:intergenic 45.0%
! CGCTCAATCCTAAGCTTTTC+AGG - Chr3:73942184-73942203 None:intergenic 45.0%
! GAGAACGATGGTGATGCTTA+GGG + Chr3:73937644-73937663 MsG0380015702.01.T01:five_prime_UTR 45.0%
! GTGTAAAGTGGTTTGCCAGT+AGG + Chr3:73940832-73940851 MsG0380015702.01.T01:intron 45.0%
! GTTTCACACTGTCCAGCTTT+TGG - Chr3:73939583-73939602 None:intergenic 45.0%
! TACATTTTGCAAAGCCTGCC+GGG - Chr3:73942483-73942502 None:intergenic 45.0%
! TCAGTATGGTGTCAGCAAAC+CGG - Chr3:73941824-73941843 None:intergenic 45.0%
! TGGTGGGTCCCAAACTTTAT+GGG + Chr3:73941473-73941492 MsG0380015702.01.T01:CDS 45.0%
!! ATGGTGGGTCCCAAACTTTA+TGG + Chr3:73941472-73941491 MsG0380015702.01.T01:CDS 45.0%
!! CCAAGCCTTATTCCACTAAG+TGG - Chr3:73939974-73939993 None:intergenic 45.0%
!! GGCTTGGTAAAAGTGTCGTT+TGG - Chr3:73939319-73939338 None:intergenic 45.0%
!! GTCGAGCTTTATTAAGGAGC+CGG + Chr3:73941802-73941821 MsG0380015702.01.T01:CDS 45.0%
!!! GTAGGTTTTGAAGGCTCAGA+TGG - Chr3:73939238-73939257 None:intergenic 45.0%
AAAGAGCAAAGTCGCATCGC+AGG + Chr3:73939442-73939461 MsG0380015702.01.T01:CDS 50.0%
AGAACTTGAGAGGAGGCAGA+AGG + Chr3:73942207-73942226 MsG0380015702.01.T01:CDS 50.0%
AGACAAGTGCACCCTTCACT+GGG + Chr3:73938137-73938156 MsG0380015702.01.T01:five_prime_UTR 50.0%
AGACTATGGGTGAGTCGGAT+GGG + Chr3:73938420-73938439 MsG0380015702.01.T01:CDS 50.0%
AGAGGCAAAAGCTGCAGAAG+AGG + Chr3:73942388-73942407 MsG0380015702.01.T01:CDS 50.0%
AGCCAAAAGAAAGAGGGAGC+TGG + Chr3:73942445-73942464 MsG0380015702.01.T01:CDS 50.0%
AGCGAGAAGAACTTGAGAGG+AGG + Chr3:73942200-73942219 MsG0380015702.01.T01:CDS 50.0%
AGCTGGACAGTGTGAAACAG+AGG + Chr3:73939585-73939604 MsG0380015702.01.T01:CDS 50.0%
AGGCAATGAACTGGTTGAGG+AGG + Chr3:73940350-73940369 MsG0380015702.01.T01:intron 50.0%
ATGCTGTGCACATCATTGCC+AGG - Chr3:73939136-73939155 None:intergenic 50.0%
ATGTAGCCAACCCCACTTAG+TGG + Chr3:73939959-73939978 MsG0380015702.01.T01:intron 50.0%
CAAGCTGCAGGGAAATCCTT+AGG + Chr3:73942709-73942728 MsG0380015702.01.T01:CDS 50.0%
CAGCTCCTTATGTCACTCGA+CGG - Chr3:73938701-73938720 None:intergenic 50.0%
CCAAATGCCAGGCAATGAAC+TGG + Chr3:73940341-73940360 MsG0380015702.01.T01:intron 50.0%
CCAGTTCATTGCCTGGCATT+TGG - Chr3:73940344-73940363 None:intergenic 50.0%
CGAGCCCAGATGATCATCAA+TGG + Chr3:73942674-73942693 MsG0380015702.01.T01:CDS 50.0%
CTGATTCCTATGCACCGAAC+AGG + Chr3:73938486-73938505 MsG0380015702.01.T01:CDS 50.0%
CTTCTGCTTCAGCTTTCCTC+CGG - Chr3:73942415-73942434 None:intergenic 50.0%
GAAAGCTCGATTGCAAGCAG+AGG + Chr3:73942370-73942389 MsG0380015702.01.T01:CDS 50.0%
GAATCAGAGAGCCACCTAGA+TGG + Chr3:73941654-73941673 MsG0380015702.01.T01:CDS 50.0%
GACATAAGGAGCTGCAGTGT+GGG + Chr3:73938707-73938726 MsG0380015702.01.T01:CDS 50.0%
GACCCACCATTTCCAGTTTC+GGG - Chr3:73941462-73941481 None:intergenic 50.0%
GGACCCACCATTTCCAGTTT+CGG - Chr3:73941463-73941482 None:intergenic 50.0%
GGGACACGATGATCAATGAC+AGG - Chr3:73939217-73939236 None:intergenic 50.0%
GGGGGGTAATATGGTAGTTG+AGG + Chr3:73941880-73941899 MsG0380015702.01.T01:intron 50.0%
GGTAGAGACTATGGGTGAGT+CGG + Chr3:73938415-73938434 MsG0380015702.01.T01:CDS 50.0%
GTAAGAAAAGACCCCTGCCA+GGG + Chr3:73938789-73938808 MsG0380015702.01.T01:CDS 50.0%
TAGGAATCAGCCGATGCAGT+CGG - Chr3:73938476-73938495 None:intergenic 50.0%
TCCTCAACCAGTTCATTGCC+TGG - Chr3:73940351-73940370 None:intergenic 50.0%
TGACATAAGGAGCTGCAGTG+TGG + Chr3:73938706-73938725 MsG0380015702.01.T01:CDS 50.0%
TGATATGGAGCCGACTGCAT+CGG + Chr3:73938463-73938482 MsG0380015702.01.T01:CDS 50.0%
TTCTGCTTCAGCTTTCCTCC+GGG - Chr3:73942414-73942433 None:intergenic 50.0%
TTGCAGGAAAATGTGGGACC+TGG + Chr3:73941399-73941418 MsG0380015702.01.T01:intron 50.0%
TTTGGTGGGATCAAGCTGCA+GGG + Chr3:73942698-73942717 MsG0380015702.01.T01:CDS 50.0%
! ATTTGGTGGGATCAAGCTGC+AGG + Chr3:73942697-73942716 MsG0380015702.01.T01:CDS 50.0%
! CTCCAGCTCCCTCTTTCTTT+TGG - Chr3:73942450-73942469 None:intergenic 50.0%
! GAATCTGGCTCATCATCCAG+TGG + Chr3:73940488-73940507 MsG0380015702.01.T01:CDS 50.0%
! GCCATTGGTGCAGCAGTTTT+TGG - Chr3:73938863-73938882 None:intergenic 50.0%
! TCTTTCAGCAGGTTCTGGCT+TGG - Chr3:73939335-73939354 None:intergenic 50.0%
!! CTCGCCTCCTCTTTGAAACT+TGG - Chr3:73942658-73942677 None:intergenic 50.0%
!! TTGCTTCCTGTTCGGTGCAT+AGG - Chr3:73938495-73938514 None:intergenic 50.0%
AGCAAAGTCGCATCGCAGGA+GGG + Chr3:73939446-73939465 MsG0380015702.01.T01:CDS 55.0%
CAAAAGCTGCAGAAGAGGCC+CGG + Chr3:73942393-73942412 MsG0380015702.01.T01:CDS 55.0%
CTGTGCACATCATTGCCAGG+TGG - Chr3:73939133-73939152 None:intergenic 55.0%
CTTGAGAGGAGGCAGAAGGA+AGG + Chr3:73942211-73942230 MsG0380015702.01.T01:CDS 55.0%
GAGACAAGTGCACCCTTCAC+TGG + Chr3:73938136-73938155 MsG0380015702.01.T01:five_prime_UTR 55.0%
GAGACTATGGGTGAGTCGGA+TGG + Chr3:73938419-73938438 MsG0380015702.01.T01:CDS 55.0%
GAGGACGTGGACATTGTTGG+TGG + Chr3:73940369-73940388 MsG0380015702.01.T01:CDS 55.0%
GAGGAGGACGTGGACATTGT+TGG + Chr3:73940366-73940385 MsG0380015702.01.T01:CDS 55.0%
GCACCGAACAGGAAGCAACT+TGG + Chr3:73938497-73938516 MsG0380015702.01.T01:CDS 55.0%
GCCAGGCAATGAACTGGTTG+AGG + Chr3:73940347-73940366 MsG0380015702.01.T01:intron 55.0%
GCTCGACGGTAGAGAGTTTC+AGG - Chr3:73941789-73941808 None:intergenic 55.0%
GCTGCAGTGTGGGACAGAAA+AGG + Chr3:73938717-73938736 MsG0380015702.01.T01:CDS 55.0%
GGTAAGAAAAGACCCCTGCC+AGG + Chr3:73938788-73938807 MsG0380015702.01.T01:CDS 55.0%
TATGGGTGAGTCGGATGGGT+TGG + Chr3:73938424-73938443 MsG0380015702.01.T01:CDS 55.0%
TGAACTGGTTGAGGAGGACG+TGG + Chr3:73940356-73940375 MsG0380015702.01.T01:CDS 55.0%
! ATGGGTGAGTCGGATGGGTT+GGG + Chr3:73938425-73938444 MsG0380015702.01.T01:CDS 55.0%
!! TAGCTCGGGGAGGGTTGATA+TGG + Chr3:73938448-73938467 MsG0380015702.01.T01:CDS 55.0%
AGCTGGAGAGAGAAGCAGCC+CGG + Chr3:73942462-73942481 MsG0380015702.01.T01:CDS 60.0%
CTCTGGTCAGCTGGATACCC+AGG - Chr3:73941609-73941628 None:intergenic 60.0%
GAGCAAAGTCGCATCGCAGG+AGG + Chr3:73939445-73939464 MsG0380015702.01.T01:CDS 60.0%
GGGACAGAAAAGGCCTCAGC+TGG + Chr3:73938727-73938746 MsG0380015702.01.T01:CDS 60.0%
!! CTGTGTTGGCTCTCCAGCTG+AGG - Chr3:73938743-73938762 None:intergenic 60.0%
!! GGGAGGGTGTTGCGTCTAAG+AGG + Chr3:73941754-73941773 MsG0380015702.01.T01:CDS 60.0%
!! GTCGGATGGGTTGGGTAGCT+CGG + Chr3:73938433-73938452 MsG0380015702.01.T01:CDS 60.0%
!! TCGGATGGGTTGGGTAGCTC+GGG + Chr3:73938434-73938453 MsG0380015702.01.T01:CDS 60.0%
AAGCTGCAGAAGAGGCCCGG+AGG + Chr3:73942396-73942415 MsG0380015702.01.T01:CDS 65.0%
GTCTTGGGACCACTACGCCC+TGG - Chr3:73938809-73938828 None:intergenic 65.0%
! TGGGTTGGGTAGCTCGGGGA+GGG + Chr3:73938439-73938458 MsG0380015702.01.T01:CDS 65.0%
!! ATGGGTTGGGTAGCTCGGGG+AGG + Chr3:73938438-73938457 MsG0380015702.01.T01:CDS 65.0%
!! CGGATGGGTTGGGTAGCTCG+GGG + Chr3:73938435-73938454 MsG0380015702.01.T01:CDS 65.0%
!! CGGCAAGCATCGGTGCCACA+TGG + Chr3:73938767-73938786 MsG0380015702.01.T01:CDS 65.0%
AGACCCCTGCCAGGGCGTAG+TGG + Chr3:73938797-73938816 MsG0380015702.01.T01:CDS 70.0%
GGACCACTACGCCCTGGCAG+GGG - Chr3:73938803-73938822 None:intergenic 70.0%
GGAGAGAGAAGCAGCCCGGC+AGG + Chr3:73942466-73942485 MsG0380015702.01.T01:CDS 70.0%
GGGACCACTACGCCCTGGCA+GGG - Chr3:73938804-73938823 None:intergenic 70.0%
TGGGACCACTACGCCCTGGC+AGG - Chr3:73938805-73938824 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 73937635 73942730 73937635 ID=MsG0380015702.01;Name=MsG0380015702.01
Chr3 mRNA 73937635 73942730 73937635 ID=MsG0380015702.01.T01;Parent=MsG0380015702.01;Name=MsG0380015702.01.T01;_AED=0.26;_eAED=0.27;_QI=646|0.55|0.5|1|0.88|1|10|0|728
Chr3 exon 73937635 73939606 73937635 ID=MsG0380015702.01.T01:exon:14158;Parent=MsG0380015702.01.T01
Chr3 exon 73940182 73940230 73940182 ID=MsG0380015702.01.T01:exon:14159;Parent=MsG0380015702.01.T01
Chr3 exon 73940352 73940519 73940352 ID=MsG0380015702.01.T01:exon:14160;Parent=MsG0380015702.01.T01
Chr3 exon 73941232 73941311 73941232 ID=MsG0380015702.01.T01:exon:14161;Parent=MsG0380015702.01.T01
Chr3 exon 73941405 73941500 73941405 ID=MsG0380015702.01.T01:exon:14162;Parent=MsG0380015702.01.T01
Chr3 exon 73941627 73941675 73941627 ID=MsG0380015702.01.T01:exon:14163;Parent=MsG0380015702.01.T01
Chr3 exon 73941754 73941869 73941754 ID=MsG0380015702.01.T01:exon:14164;Parent=MsG0380015702.01.T01
Chr3 exon 73942166 73942232 73942166 ID=MsG0380015702.01.T01:exon:14165;Parent=MsG0380015702.01.T01
Chr3 exon 73942369 73942499 73942369 ID=MsG0380015702.01.T01:exon:14166;Parent=MsG0380015702.01.T01
Chr3 exon 73942626 73942730 73942626 ID=MsG0380015702.01.T01:exon:14167;Parent=MsG0380015702.01.T01
Chr3 five_prime_UTR 73937635 73938280 73937635 ID=MsG0380015702.01.T01:five_prime_utr;Parent=MsG0380015702.01.T01
Chr3 CDS 73938281 73939606 73938281 ID=MsG0380015702.01.T01:cds;Parent=MsG0380015702.01.T01
Chr3 CDS 73940182 73940230 73940182 ID=MsG0380015702.01.T01:cds;Parent=MsG0380015702.01.T01
Chr3 CDS 73940352 73940519 73940352 ID=MsG0380015702.01.T01:cds;Parent=MsG0380015702.01.T01
Chr3 CDS 73941232 73941311 73941232 ID=MsG0380015702.01.T01:cds;Parent=MsG0380015702.01.T01
Chr3 CDS 73941405 73941500 73941405 ID=MsG0380015702.01.T01:cds;Parent=MsG0380015702.01.T01
Chr3 CDS 73941627 73941675 73941627 ID=MsG0380015702.01.T01:cds;Parent=MsG0380015702.01.T01
Chr3 CDS 73941754 73941869 73941754 ID=MsG0380015702.01.T01:cds;Parent=MsG0380015702.01.T01
Chr3 CDS 73942166 73942232 73942166 ID=MsG0380015702.01.T01:cds;Parent=MsG0380015702.01.T01
Chr3 CDS 73942369 73942499 73942369 ID=MsG0380015702.01.T01:cds;Parent=MsG0380015702.01.T01
Chr3 CDS 73942626 73942730 73942626 ID=MsG0380015702.01.T01:cds;Parent=MsG0380015702.01.T01
Gene Sequence

>MsG0380015702.01.T01

ATGGCACCAACTGTTCCCATAGATTTTGCTGGACAAAAGGAATCCAGAAAGTATTCTCAATCACAAGTTATGGGGAAATCAAGAAAATACTCCAAAGGTTATGCTACTGGTTTTGTTCCTGAGTTTCGTCATGTGGTAGAGACTATGGGTGAGTCGGATGGGTTGGGTAGCTCGGGGAGGGTTGATATGGAGCCGACTGCATCGGCTGATTCCTATGCACCGAACAGGAAGCAACTTGGTTTGAAAGGTAACGACGGATATGGTAGTTTTGACATTCCGTTTCAACTATACTCATTGTCTAAAATGTCGGCTATGGAGAGAAAGAATTTGAAATCGAGGTTGATTTGGGAACTTGAACAAGTGAGAAAACTTCAGAAGAAAATTGACAGTATGAATTCGAACATTGTTGGATTATCTCCGTCGAGTGACATAAGGAGCTGCAGTGTGGGACAGAAAAGGCCTCAGCTGGAGAGCCAACACAGTATACGGCAAGCATCGGTGCCACATGGTAAGAAAAGACCCCTGCCAGGGCGTAGTGGTCCCAAGACAAAAAAAAGTATGTCTGGACGTTTTGAATATCCAAAAACTGCTGCACCAATGGCTTCATATGCTACATTAATGAAACAGTGTGAGAACTTACTTAACCGTCTGATGTCTCATCAATTTGGTTGGGTTTTTAATGAACCAGTCGATGTTGTTAAATTGAACATTCCGGATTATTTCAATGTCATCAAACATCCAATGGATTTGGGTACTGTGAAGAGTAGGATAACATCTGGTAAATATTCAAATCCCATGGATTTTGCTGATGATGTGAGGCTGACTTTCAAAAACGCAATGACTTATAATCCACCTGGCAATGATGTGCACAGCATAGCATTGGCACTTAGTAAAGCCTTTGAAAAAGGATGGAAGTCCATCGAGAAGAAAATTCCTGTCATTGATCATCGTGTCCCATCTGAGCCTTCAAAACCTACTTATGTAGAAAGTGTAATTTCTGACCCAATTCCCCCCACAAAAAAGAAGAAAATGACACCAAACGACACTTTTACCAAGCCAGAACCTGCTGAAAGAATTATGACTGACATGGAGAAGCAGAAATTGAGTCAACAGTTGGAGGATATGCTTGGAGACTTGCCTGATTCCATTCTTGATTTCTTGAAAGAGCAAAGTCGCATCGCAGGAGGGCAAACGAACGATGATGAAATTGAGGTTGATATTGATGCTCTTAGTGATGATACCCTGTTCAAATTACGTAAGCTTCTTGATGATTATTTGCTGGAGAAGCAACAATTTCAGCCAAAAGCTGGACAGTGTGAAACAGAGCTTCTTAATGAATCAGGGTTTAGCAATTCATCCATGCAACCTTCTAAAGGCAATGAACTGGTTGAGGAGGACGTGGACATTGTTGGTGGAAACGATCCGCCTAATTCAAATTATCCTCCACTAGAATCGAAAAAGATGGAGTCAACAGAAACAGTAAATGCAGTAGTTCAAGCAGCTCTAGTAGTGAATCTGGCTCATCATCCAGTGGTTCGTGTTAATTCAGATTCAAGTAGTTCATCTGGTAGCGAGTTAGATACTGCTAAAGCGTCAGAACCTCTTAGTTCTAAGGTGATTGGGGAAAATGTGGGACCTGGCTTGACTTACGATCAAAACAGGGGGGATCCTAGTAATCCCGAAACTGGAAATGGTGGGTCCCAAACTTTATGGGCTTTCAGTTTGCAGACTAAGCCAGATACTATTGAATCAGAGAGCCACCTAGATGGGGAGGGTGTTGCGTCTAAGAGGCAAATCTCTCCTGAAACTCTCTACCGTCGAGCTTTATTAAGGAGCCGGTTTGCTGACACCATACTGAAAGCTCAAGAGAAAACCCTTGAAAAGGATGAAAAACGTGACCCTGAAAAGCTTAGGATTGAGCGAGAAGAACTTGAGAGGAGGCAGAAGGAAGAGAAAGCTCGATTGCAAGCAGAGGCAAAAGCTGCAGAAGAGGCCCGGAGGAAAGCTGAAGCAGAAGCTGCAGCTGAAGCCAAAAGAAAGAGGGAGCTGGAGAGAGAAGCAGCCCGGCAGGCTTTGCAAAATAAATGTGGTGCTGTACATGATGAAATACACCAAGTTTCAAAGAGGAGGCGAGCCCAGATGATCATCAATGGATTTGGTGGGATCAAGCTGCAGGGAAATCCTTAG

Protein sequence

>MsG0380015702.01.T01

MAPTVPIDFAGQKESRKYSQSQVMGKSRKYSKGYATGFVPEFRHVVETMGESDGLGSSGRVDMEPTASADSYAPNRKQLGLKGNDGYGSFDIPFQLYSLSKMSAMERKNLKSRLIWELEQVRKLQKKIDSMNSNIVGLSPSSDIRSCSVGQKRPQLESQHSIRQASVPHGKKRPLPGRSGPKTKKSMSGRFEYPKTAAPMASYATLMKQCENLLNRLMSHQFGWVFNEPVDVVKLNIPDYFNVIKHPMDLGTVKSRITSGKYSNPMDFADDVRLTFKNAMTYNPPGNDVHSIALALSKAFEKGWKSIEKKIPVIDHRVPSEPSKPTYVESVISDPIPPTKKKKMTPNDTFTKPEPAERIMTDMEKQKLSQQLEDMLGDLPDSILDFLKEQSRIAGGQTNDDEIEVDIDALSDDTLFKLRKLLDDYLLEKQQFQPKAGQCETELLNESGFSNSSMQPSKGNELVEEDVDIVGGNDPPNSNYPPLESKKMESTETVNAVVQAALVVNLAHHPVVRVNSDSSSSSGSELDTAKASEPLSSKVIGENVGPGLTYDQNRGDPSNPETGNGGSQTLWAFSLQTKPDTIESESHLDGEGVASKRQISPETLYRRALLRSRFADTILKAQEKTLEKDEKRDPEKLRIEREELERRQKEEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQNKCGAVHDEIHQVSKRRRAQMIINGFGGIKLQGNP*