AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005944.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005944.01.T01 MTR_1g110310 91.156 441 0 2 24 452 1 414 0.0 808
MsG0180005944.01.T01 MTR_5g035770 54.628 443 144 6 20 443 3 407 4.47e-167 476
MsG0180005944.01.T01 MTR_5g035770 53.117 401 134 5 59 443 13 375 6.02e-148 427
MsG0180005944.01.T01 MTR_5g035770 53.234 402 133 6 58 443 6 368 1.55e-147 425
MsG0180005944.01.T01 MTR_7g109340 58.824 68 28 0 41 108 28 95 3.55e-17 82.8
MsG0180005944.01.T01 MTR_4g023470 28.704 216 112 5 33 239 80 262 1.23e-16 82.0
MsG0180005944.01.T01 MTR_3g027580 50.649 77 37 1 32 108 83 158 4.06e-16 80.5
MsG0180005944.01.T01 MTR_3g087030 58.571 70 28 1 39 108 82 150 2.95e-15 77.8
MsG0180005944.01.T01 MTR_4g015840 49.296 71 35 1 39 108 4 74 1.41e-14 75.1
MsG0180005944.01.T01 MTR_7g112360 40.000 90 50 1 24 109 1 90 1.66e-14 70.1
MsG0180005944.01.T01 MTR_2g014470 49.296 71 35 1 39 108 4 74 2.73e-14 74.3
MsG0180005944.01.T01 MTR_7g112360 43.836 73 37 1 41 109 18 90 2.88e-14 70.9
MsG0180005944.01.T01 MTR_4g078850 49.296 71 35 1 39 108 4 74 3.07e-14 74.3
MsG0180005944.01.T01 MTR_3g108020 47.887 71 36 1 39 108 4 74 5.28e-14 73.2
MsG0180005944.01.T01 MTR_2g014480 52.239 67 31 1 39 104 4 70 5.56e-14 73.2
MsG0180005944.01.T01 MTR_8g006430 52.941 68 28 1 41 108 16 79 8.09e-14 73.6
MsG0180005944.01.T01 MTR_2g097690 55.556 63 27 1 40 102 76 137 9.67e-14 70.5
MsG0180005944.01.T01 MTR_7g092380 43.750 96 47 3 41 136 24 112 9.67e-14 71.6
MsG0180005944.01.T01 MTR_7g101070 51.515 66 31 1 37 101 356 421 1.20e-13 73.2
MsG0180005944.01.T01 MTR_5g065860 41.791 67 39 0 38 104 47 113 2.01e-13 67.8
MsG0180005944.01.T01 MTR_5g012530 48.684 76 36 1 38 110 11 86 2.39e-13 72.4
MsG0180005944.01.T01 MTR_4g023490 47.945 73 37 1 35 107 12 83 3.89e-13 71.2
MsG0180005944.01.T01 MTR_5g004570 40.860 93 46 2 41 133 8 91 5.07e-13 69.3
MsG0180005944.01.T01 MTR_2g097690 54.688 64 28 1 40 103 76 138 5.14e-13 69.7
MsG0180005944.01.T01 MTR_7g069480 48.684 76 31 2 39 107 27 101 6.40e-13 71.2
MsG0180005944.01.T01 MTR_2g090705 47.887 71 36 1 39 108 4 74 8.24e-13 69.7
MsG0180005944.01.T01 MTR_2g104030 48.571 70 35 1 35 104 66 134 4.05e-12 68.6
MsG0180005944.01.T01 MTR_4g109510 43.373 83 43 1 33 111 2 84 6.15e-12 68.2
MsG0180005944.01.T01 MTR_1g052110 40.625 96 51 2 41 136 40 129 6.45e-12 66.6
MsG0180005944.01.T01 MTR_8g037810 45.205 73 40 0 41 113 8 80 7.34e-12 67.0
MsG0180005944.01.T01 MTR_8g022310 41.026 78 40 1 38 109 9 86 7.91e-12 65.1
MsG0180005944.01.T01 MTR_8g022310 41.026 78 40 1 38 109 9 86 1.00e-11 64.3
MsG0180005944.01.T01 MTR_8g022310 41.558 77 39 1 39 109 10 86 1.32e-11 64.3
MsG0180005944.01.T01 MTR_8g022310 41.026 78 40 1 38 109 9 86 1.40e-11 64.7
MsG0180005944.01.T01 MTR_5g065160 46.875 64 34 0 38 101 82 145 1.92e-11 66.2
MsG0180005944.01.T01 MTR_5g065160 46.875 64 34 0 38 101 82 145 1.93e-11 66.2
MsG0180005944.01.T01 MTR_5g065160 46.875 64 34 0 38 101 75 138 1.98e-11 66.2
MsG0180005944.01.T01 MTR_5g065160 46.875 64 34 0 38 101 81 144 2.04e-11 66.2
MsG0180005944.01.T01 MTR_1g029470 39.726 73 44 0 41 113 8 80 2.08e-11 65.9
MsG0180005944.01.T01 MTR_1g105540 47.692 65 33 1 39 103 35 98 2.42e-11 65.1
MsG0180005944.01.T01 MTR_1g029460 38.356 73 45 0 41 113 8 80 6.45e-11 64.3
MsG0180005944.01.T01 MTR_6g027110 42.647 68 34 1 39 101 2 69 9.32e-11 60.1
MsG0180005944.01.T01 MTR_4g085070 43.939 66 33 1 45 106 18 83 9.51e-11 60.5
MsG0180005944.01.T01 MTR_2g436560 47.761 67 34 1 39 105 104 169 9.71e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005944.01.T01 AT1G68370 76.136 440 57 6 26 451 4 409 0.0 671
MsG0180005944.01.T01 AT1G24120 51.528 458 157 5 20 443 3 429 8.67e-162 464
MsG0180005944.01.T01 AT1G59980 47.897 428 173 5 37 450 21 412 1.80e-133 391
MsG0180005944.01.T01 AT1G59980 50.565 354 136 2 37 378 21 347 9.54e-123 362
MsG0180005944.01.T01 AT1G59980 45.974 385 158 5 80 450 1 349 8.82e-109 326
MsG0180005944.01.T01 AT3G62600 57.353 68 29 0 41 108 28 95 6.47e-16 79.3
MsG0180005944.01.T01 AT5G01390 51.389 72 34 1 39 109 4 75 1.12e-15 76.6
MsG0180005944.01.T01 AT5G01390 51.389 72 34 1 39 109 4 75 1.15e-15 76.6
MsG0180005944.01.T01 AT5G01390 51.389 72 34 1 39 109 4 75 2.07e-15 76.6
MsG0180005944.01.T01 AT2G20560 50.704 71 34 1 39 108 4 74 2.09e-15 77.8
MsG0180005944.01.T01 AT4G28480 50.704 71 34 1 39 108 4 74 2.43e-15 76.6
MsG0180005944.01.T01 AT5G01390 51.389 72 34 1 39 109 4 75 3.78e-15 76.6
MsG0180005944.01.T01 AT4G28480 50.704 71 34 1 39 108 4 74 4.04e-15 77.0
MsG0180005944.01.T01 AT5G48030 42.727 110 54 3 4 112 66 167 4.30e-15 77.8
MsG0180005944.01.T01 AT3G08910 50.704 71 34 1 39 108 4 74 4.89e-15 76.3
MsG0180005944.01.T01 AT1G56300 44.286 70 35 1 36 101 10 79 4.85e-14 68.9
MsG0180005944.01.T01 AT2G22360 49.398 83 41 1 39 121 86 167 5.32e-14 74.3
MsG0180005944.01.T01 AT2G21510 46.575 73 39 0 41 113 8 80 7.08e-14 73.2
MsG0180005944.01.T01 AT2G21510 46.575 73 39 0 41 113 8 80 7.08e-14 73.2
MsG0180005944.01.T01 AT2G21510 46.575 73 39 0 41 113 8 80 7.12e-14 73.2
MsG0180005944.01.T01 AT2G21510 46.575 73 39 0 41 113 8 80 7.12e-14 73.2
MsG0180005944.01.T01 AT2G21510 46.575 73 39 0 41 113 8 80 7.36e-14 72.8
MsG0180005944.01.T01 AT3G17830 49.315 73 36 1 39 111 63 134 7.95e-14 73.9
MsG0180005944.01.T01 AT3G08970 54.412 68 30 1 39 106 27 93 8.86e-14 73.9
MsG0180005944.01.T01 AT3G08970 54.412 68 30 1 39 106 27 93 8.86e-14 73.9
MsG0180005944.01.T01 AT4G39960 49.398 83 41 1 39 121 85 166 1.61e-13 72.8
MsG0180005944.01.T01 AT4G39960 49.398 83 41 1 39 121 85 166 1.61e-13 72.8
MsG0180005944.01.T01 AT5G16650 44.118 68 38 0 38 105 10 77 1.70e-13 67.8
MsG0180005944.01.T01 AT5G03160 51.515 66 31 1 37 101 368 433 1.80e-13 72.8
MsG0180005944.01.T01 AT5G16650 44.776 67 37 0 38 104 10 76 1.81e-13 68.6
MsG0180005944.01.T01 AT5G25530 46.479 71 37 1 39 108 4 74 1.87e-13 71.6
MsG0180005944.01.T01 AT1G56300 44.286 70 35 1 36 101 10 79 1.90e-13 68.2
MsG0180005944.01.T01 AT1G74250 44.828 87 43 1 30 111 2 88 1.99e-13 72.8
MsG0180005944.01.T01 AT3G12170 35.772 123 69 4 15 136 25 138 2.03e-13 71.2
MsG0180005944.01.T01 AT1G80030 53.030 66 30 1 39 104 75 139 2.72e-13 72.0
MsG0180005944.01.T01 AT1G80030 53.030 66 30 1 39 104 75 139 2.73e-13 72.0
MsG0180005944.01.T01 AT1G80030 53.030 66 30 1 39 104 75 139 2.73e-13 72.0
MsG0180005944.01.T01 AT1G80030 53.030 66 30 1 39 104 75 139 2.73e-13 72.0
MsG0180005944.01.T01 AT3G12170 40.625 96 51 2 41 136 13 102 4.59e-13 69.7
MsG0180005944.01.T01 AT5G06910 45.946 74 40 0 31 104 21 94 5.13e-13 69.7
MsG0180005944.01.T01 AT2G41000 44.928 69 33 1 39 102 3 71 5.73e-13 68.2
MsG0180005944.01.T01 AT1G71000 31.818 132 76 4 28 149 1 128 6.12e-13 67.0
MsG0180005944.01.T01 AT1G28210 31.933 119 62 2 4 109 6 118 1.51e-12 69.3
MsG0180005944.01.T01 AT1G28210 31.933 119 62 2 4 109 6 118 1.54e-12 69.3
MsG0180005944.01.T01 AT2G41000 44.928 69 33 1 39 102 3 71 1.57e-12 66.6
MsG0180005944.01.T01 AT1G28210 31.933 119 62 2 4 109 6 118 1.71e-12 69.3
MsG0180005944.01.T01 AT5G59610 50.000 66 32 1 37 102 71 135 1.99e-12 67.8
MsG0180005944.01.T01 AT4G39150 43.836 73 41 0 41 113 8 80 2.07e-12 68.6
MsG0180005944.01.T01 AT4G39150 43.836 73 41 0 41 113 8 80 2.07e-12 68.6
MsG0180005944.01.T01 AT4G39150 43.836 73 41 0 41 113 8 80 2.07e-12 68.6
MsG0180005944.01.T01 AT1G21080 41.892 74 43 0 41 114 8 81 2.55e-12 68.9
MsG0180005944.01.T01 AT1G59725 43.243 74 40 1 39 110 4 77 2.70e-12 68.2
MsG0180005944.01.T01 AT1G21080 41.892 74 43 0 41 114 8 81 2.76e-12 68.6
MsG0180005944.01.T01 AT1G10350 42.254 71 40 1 39 108 4 74 3.83e-12 67.8
MsG0180005944.01.T01 AT2G33735 42.188 64 37 0 38 101 21 84 4.91e-12 63.2
MsG0180005944.01.T01 AT2G33735 42.188 64 37 0 38 101 21 84 4.91e-12 63.2
MsG0180005944.01.T01 AT5G59610 50.000 66 32 1 37 102 71 135 5.36e-12 66.6
MsG0180005944.01.T01 AT5G59610 50.000 66 32 1 37 102 71 135 5.36e-12 66.6
MsG0180005944.01.T01 AT5G59610 50.000 66 32 1 37 102 71 135 6.11e-12 66.2
MsG0180005944.01.T01 AT5G59610 50.000 66 32 1 37 102 71 135 6.11e-12 66.2
MsG0180005944.01.T01 AT1G76700 38.710 93 48 2 41 133 8 91 2.33e-11 65.9
MsG0180005944.01.T01 AT5G49060 49.254 67 33 1 39 105 99 164 2.63e-11 65.5
MsG0180005944.01.T01 AT5G49060 49.254 67 33 1 39 105 99 164 2.63e-11 65.5
MsG0180005944.01.T01 AT2G35720 41.758 91 46 3 24 110 2 89 4.12e-11 65.5
MsG0180005944.01.T01 AT1G71000 39.286 84 43 2 28 107 1 80 4.12e-11 62.0
MsG0180005944.01.T01 AT5G25530 41.772 79 37 2 39 108 4 82 4.55e-11 64.7
MsG0180005944.01.T01 AT4G21180 44.776 67 35 2 39 104 99 164 6.16e-11 65.1
MsG0180005944.01.T01 AT4G21180 44.776 67 35 2 39 104 19 84 6.89e-11 64.7

Find 120 sgRNAs with CRISPR-Local

Find 433 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACACATATATTTGCCGTTTA+TGG 0.136662 1:+97852029 MsG0180005944.01.T01:CDS
GGAAGTTCTAGCAAAATTTC+TGG 0.196708 1:+97853127 MsG0180005944.01.T01:CDS
GGGTCTAAACGATGGAATTT+TGG 0.238910 1:+97847071 None:intergenic
CAATGTTTGCAGCTTTATTC+AGG 0.268018 1:+97850127 MsG0180005944.01.T01:CDS
TTCCCCAGGGCTCTCACCTT+TGG 0.274890 1:-97853158 None:intergenic
TTTCTTTGTTGCGGGCTGTT+TGG 0.286699 1:+97851889 MsG0180005944.01.T01:CDS
AAAGCAGCCCGTGGATATAT+TGG 0.290376 1:+97853345 MsG0180005944.01.T01:three_prime_UTR
TCAGGCATTGGCACGCTATC+AGG 0.305387 1:+97852369 MsG0180005944.01.T01:intron
TTGAATAGTTCTGAAGCTTC+AGG 0.318305 1:-97849211 None:intergenic
GGATTGTTGGCATTCTTGTC+AGG 0.332047 1:-97849190 None:intergenic
GTATGGATATTATGTCTATT+TGG 0.333645 1:+97851861 MsG0180005944.01.T01:CDS
GAAATCGATTTATCTAATCT+TGG 0.354013 1:+97850093 MsG0180005944.01.T01:CDS
AAAGAGGGGCTTCAGGTCTA+TGG 0.355072 1:+97848204 MsG0180005944.01.T01:CDS
TTCAAGAACATTAGCCGAAA+TGG 0.367637 1:-97850258 None:intergenic
TTCTGAAGCTTCAGGATTGT+TGG 0.367958 1:-97849203 None:intergenic
CCCAATCAAGACTACCATTT+CGG 0.369384 1:+97850244 MsG0180005944.01.T01:CDS
TCTTCAACCTTGTGAAGTTT+CGG 0.371250 1:+97851992 MsG0180005944.01.T01:CDS
TAAAGAGAAAGAGGGGCTTC+AGG 0.371597 1:+97848197 MsG0180005944.01.T01:CDS
GCCGAAATGGTAGTCTTGAT+TGG 0.375333 1:-97850245 None:intergenic
AGATGGAGGGTCAGATAGTA+AGG 0.390540 1:+97853180 MsG0180005944.01.T01:CDS
ATGGTTCAACCTCAATCTTA+AGG 0.396575 1:+97853222 MsG0180005944.01.T01:CDS
TGTGCCGCAAGGCTTGATAA+AGG 0.397229 1:-97853613 None:intergenic
CAACCTCAATCTTAAGGGCT+CGG 0.401801 1:+97853228 MsG0180005944.01.T01:CDS
TGGTTGGTTAATTTGTTCAT+TGG 0.402552 1:+97853422 MsG0180005944.01.T01:three_prime_UTR
GGGCTATGGTTTAGCATTGC+AGG 0.403402 1:+97850645 MsG0180005944.01.T01:CDS
TAAATTATTCAGACCATAAA+CGG 0.405248 1:-97852042 None:intergenic
TCGGAAAATTTGAGTCTCAT+TGG 0.405324 1:-97853504 None:intergenic
GGTTCCTCAAAGTTGTGAAC+TGG 0.407085 1:+97853402 MsG0180005944.01.T01:three_prime_UTR
TAAGGGTCACGTCGAATTGC+TGG 0.410479 1:-97848253 None:intergenic
AAGCAGCCCGTGGATATATT+GGG 0.418295 1:+97853346 MsG0180005944.01.T01:three_prime_UTR
ATTTCGAACAAGATGCAAAC+GGG 0.423149 1:+97850623 MsG0180005944.01.T01:CDS
AAATCGATTTATCTAATCTT+GGG 0.433620 1:+97850094 MsG0180005944.01.T01:CDS
AATGAGCAGCAAGCTGAGTC+CGG 0.438090 1:+97850474 MsG0180005944.01.T01:CDS
AACCTCAATCTTAAGGGCTC+GGG 0.448187 1:+97853229 MsG0180005944.01.T01:CDS
GTTCTTGAAGAAGCTTTGAA+TGG 0.448738 1:+97850272 MsG0180005944.01.T01:CDS
GGTGAGAGCCCTGGGGAAGA+TGG 0.452090 1:+97853163 MsG0180005944.01.T01:CDS
CCAACCAGTTCACAACTTTG+AGG 0.453631 1:-97853406 None:intergenic
AGATAAAGATAAAGAGAAAG+AGG 0.456920 1:+97848188 MsG0180005944.01.T01:CDS
CCGAAATGGTAGTCTTGATT+GGG 0.459457 1:-97850244 None:intergenic
TGGTTCAACCTCAATCTTAA+GGG 0.459920 1:+97853223 MsG0180005944.01.T01:CDS
ACTGGCAAAGTGACATCTGC+TGG 0.462289 1:+97851786 MsG0180005944.01.T01:CDS
TCAGATAGTAAGGATAAATC+AGG 0.462722 1:+97853190 MsG0180005944.01.T01:CDS
ATTCCAAAGGTGAGAGCCCT+GGG 0.470174 1:+97853155 MsG0180005944.01.T01:CDS
TTTATTTGGTAACAGCAAGC+TGG 0.478612 1:+97850217 MsG0180005944.01.T01:intron
GATAAAGATAAAGAGAAAGA+GGG 0.483151 1:+97848189 MsG0180005944.01.T01:CDS
TTCGAAGGAATCATCCGATC+AGG 0.490586 1:+97848291 MsG0180005944.01.T01:CDS
TCTGACCCTCCATCTTCCCC+AGG 0.494682 1:-97853172 None:intergenic
TGACAATGGTGAAGGTAGAA+TGG 0.495930 1:-97853063 None:intergenic
GTACGACAGTGCAGGATTTG+AGG 0.501253 1:+97849285 MsG0180005944.01.T01:CDS
AACCCGAGCCCTTAAGATTG+AGG 0.504980 1:-97853231 None:intergenic
ACTGCCACTTCCACTAGTAC+TGG 0.506538 1:-97853092 None:intergenic
GATTCCAAAGGTGAGAGCCC+TGG 0.509111 1:+97853154 MsG0180005944.01.T01:CDS
TTATTTGGTAACAGCAAGCT+GGG 0.510014 1:+97850218 MsG0180005944.01.T01:intron
GATTGTTGGCATTCTTGTCA+GGG 0.511190 1:-97849189 None:intergenic
AAGTTTGATCCCATGACTGA+TGG 0.511963 1:-97853322 None:intergenic
TGAGGATGCTACAAGGGAAT+CGG 0.513549 1:-97853523 None:intergenic
ACGGCAAATATATGTGTGCC+AGG 0.520233 1:-97852023 None:intergenic
GAAGTTTCGGAACTAAAGCC+TGG 0.523940 1:+97852005 MsG0180005944.01.T01:CDS
GAAACGCCTAAAACTTCGTA+AGG 0.525261 1:-97848271 None:intergenic
TTGGTTTGTGATGCAATCAA+AGG 0.528612 1:+97853441 MsG0180005944.01.T01:three_prime_UTR
CAGGTCTATGGATCAAAAGA+TGG 0.537155 1:+97848216 MsG0180005944.01.T01:CDS
AGAAGGCAGTACGACAGTGC+AGG 0.538322 1:+97849277 MsG0180005944.01.T01:CDS
ATGAGCAGCAAGCTGAGTCC+GGG 0.538924 1:+97850475 MsG0180005944.01.T01:CDS
AGGCTTGATAAAGGAAAAGA+AGG 0.539248 1:-97853604 None:intergenic
ACAGTCAGACCCCTTCCAAT+GGG 0.539807 1:+97850302 MsG0180005944.01.T01:CDS
TATTTCGAACAAGATGCAAA+CGG 0.540322 1:+97850622 MsG0180005944.01.T01:CDS
GGCACTTGATGCTGATAGCA+TGG 0.541278 1:+97850065 MsG0180005944.01.T01:intron
TGACAGATGTTCCCATTGGA+AGG 0.542282 1:-97850313 None:intergenic
CCAACCAGTACTAGTGGAAG+TGG 0.543516 1:+97853088 MsG0180005944.01.T01:CDS
CCACTTCCACTAGTACTGGT+TGG 0.543648 1:-97853088 None:intergenic
CCACTGACAGATGTTCCCAT+TGG 0.546382 1:-97850317 None:intergenic
TACAGTCAGACCCCTTCCAA+TGG 0.549746 1:+97850301 MsG0180005944.01.T01:CDS
CACTACACCCAATATATCCA+CGG 0.551627 1:-97853353 None:intergenic
GAGAGCCCTGGGGAAGATGG+AGG 0.552103 1:+97853166 MsG0180005944.01.T01:CDS
ATAAAGATAAAGAGAAAGAG+GGG 0.553561 1:+97848190 MsG0180005944.01.T01:CDS
TAAGAAAGAGGAATGAGCTA+CGG 0.559189 1:+97852246 MsG0180005944.01.T01:CDS
ATTCGAATCAGAATATAGAA+AGG 0.559792 1:+97852271 MsG0180005944.01.T01:CDS
GCTTGAGTGACCATCAGTCA+TGG 0.560979 1:+97853312 MsG0180005944.01.T01:three_prime_UTR
AGTGGCAGTAATTTAAGCAA+TGG 0.561362 1:+97853106 MsG0180005944.01.T01:CDS
GTTGCGGGCTGTTTGGAAAG+TGG 0.564367 1:+97851896 MsG0180005944.01.T01:CDS
AGAGCCCTGGGGAAGATGGA+GGG 0.564660 1:+97853167 MsG0180005944.01.T01:CDS
AGCTTCAGAACTATTCAAAG+AGG 0.565165 1:+97849216 MsG0180005944.01.T01:CDS
TAGATGAGCTTCTGAAGCAA+AGG 0.568314 1:+97853032 MsG0180005944.01.T01:CDS
GACAGATGTTCCCATTGGAA+GGG 0.577219 1:-97850312 None:intergenic
CCTCAAAGTTGTGAACTGGT+TGG 0.577735 1:+97853406 MsG0180005944.01.T01:three_prime_UTR
AGATGAGCTTCTGAAGCAAA+GGG 0.578480 1:+97853033 MsG0180005944.01.T01:CDS
ACAGATGTTCCCATTGGAAG+GGG 0.585092 1:-97850311 None:intergenic
ATTCAACTGTGAATGCGGTA+TGG 0.586790 1:+97851844 MsG0180005944.01.T01:CDS
GTCAAGCCAACCAGTACTAG+TGG 0.588616 1:+97853082 MsG0180005944.01.T01:CDS
CAGGAAGATAGTGAGAAGAC+TGG 0.589084 1:+97851768 MsG0180005944.01.T01:intron
GCTTTCTTTAAAAGGTTGGA+AGG 0.589624 1:+97851969 MsG0180005944.01.T01:CDS
AGTAACTCTTACTACAATCC+CGG 0.591228 1:-97850493 None:intergenic
CTTGAGTGACCATCAGTCAT+GGG 0.593639 1:+97853313 MsG0180005944.01.T01:three_prime_UTR
TATATGTTGAGGATGCTACA+AGG 0.593654 1:-97853530 None:intergenic
GGGAACATCTGTCAGTGGAA+AGG 0.595107 1:+97850322 MsG0180005944.01.T01:CDS
CTGACCCTCCATCTTCCCCA+GGG 0.596536 1:-97853171 None:intergenic
TAATATTTACGCTCTCTGAA+AGG 0.598724 1:-97853689 None:intergenic
TCTATGGATCAAAAGATGGA+AGG 0.606940 1:+97848220 MsG0180005944.01.T01:CDS
TATCTGACCCAGAAAAGAGA+AGG 0.614795 1:+97849260 MsG0180005944.01.T01:CDS
ACTACACCCAATATATCCAC+GGG 0.622246 1:-97853352 None:intergenic
TGTTGTGGTGCAGTTAGCGA+TGG 0.622724 1:+97851929 MsG0180005944.01.T01:CDS
AGCGATGGCCAAGGATCCTG+AGG 0.626922 1:+97851944 MsG0180005944.01.T01:CDS
GCGATGGCCAAGGATCCTGA+GGG 0.627814 1:+97851945 MsG0180005944.01.T01:CDS
GGTGCAGTTAGCGATGGCCA+AGG 0.631797 1:+97851935 MsG0180005944.01.T01:CDS
ATTTCTGGTGAAGATTCCAA+AGG 0.636229 1:+97853142 MsG0180005944.01.T01:CDS
AATGGATTCAACTGTGAATG+CGG 0.640290 1:+97851839 MsG0180005944.01.T01:CDS
ATATGTTGAGGATGCTACAA+GGG 0.642836 1:-97853529 None:intergenic
TGATGCTGATAGCATGGACA+TGG 0.647234 1:+97850071 MsG0180005944.01.T01:CDS
ATCAAACTTAAAGCAGCCCG+TGG 0.648796 1:+97853336 MsG0180005944.01.T01:three_prime_UTR
TTTAGTTCCGAAACTTCACA+AGG 0.659450 1:-97851999 None:intergenic
TTTCGAACAAGATGCAAACG+GGG 0.666223 1:+97850624 MsG0180005944.01.T01:CDS
GATGGCCAAGGATCCTGAGG+GGG 0.667249 1:+97851947 MsG0180005944.01.T01:CDS
AAACGCCTAAAACTTCGTAA+GGG 0.671059 1:-97848270 None:intergenic
GAGCTTCTGAAGCAAAGGGA+CGG 0.671749 1:+97853037 MsG0180005944.01.T01:CDS
CCAATGGGAACATCTGTCAG+TGG 0.675083 1:+97850317 MsG0180005944.01.T01:CDS
AGTACTGGTTGGCTTGACAA+TGG 0.678755 1:-97853077 None:intergenic
GGTTGGCTTGACAATGGTGA+AGG 0.708781 1:-97853071 None:intergenic
TTCGAACAAGATGCAAACGG+GGG 0.711604 1:+97850625 MsG0180005944.01.T01:CDS
CGATGGCCAAGGATCCTGAG+GGG 0.716333 1:+97851946 MsG0180005944.01.T01:CDS
TTCCAAAGGTGAGAGCCCTG+GGG 0.764572 1:+97853156 MsG0180005944.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTATTTAAAAAAAA+GGG + Chr1:97847525-97847544 MsG0180005944.01.T01:intron 0.0%
!!! TTTTTTTTTATTTAAAAAAA+AGG + Chr1:97847524-97847543 MsG0180005944.01.T01:intron 0.0%
!! AAAGTTACATATTAATTAAA+AGG - Chr1:97850021-97850040 None:intergenic 10.0%
!! AATAGTATATATATAAAGTA+AGG - Chr1:97847304-97847323 None:intergenic 10.0%
!! TATATTTATTTAGTCAAAAT+TGG + Chr1:97849664-97849683 MsG0180005944.01.T01:intron 10.0%
!! TTATTTGATATTATTTGTTT+GGG + Chr1:97853713-97853732 MsG0180005944.01.T01:three_prime_UTR 10.0%
!! TTTATTTGATATTATTTGTT+TGG + Chr1:97853712-97853731 MsG0180005944.01.T01:three_prime_UTR 10.0%
!!! AATTTAATACCAATATATTT+TGG - Chr1:97851006-97851025 None:intergenic 10.0%
!!! TATTTTATTTAACAAAAATC+GGG - Chr1:97847209-97847228 None:intergenic 10.0%
!!! TTTTTTATTTAAAAAAAAGG+GGG + Chr1:97847527-97847546 MsG0180005944.01.T01:intron 10.0%
!! AATAAATATAATATTTGACG+TGG - Chr1:97849654-97849673 None:intergenic 15.0%
!! AATGAGATAATATATTGTTA+AGG + Chr1:97850816-97850835 MsG0180005944.01.T01:intron 15.0%
!! ATGAGATAATATATTGTTAA+GGG + Chr1:97850817-97850836 MsG0180005944.01.T01:intron 15.0%
!! TAATAATCGAATTCAAAAAA+GGG - Chr1:97848019-97848038 None:intergenic 15.0%
!! TATCAAAAATATATATGTTG+AGG - Chr1:97853544-97853563 None:intergenic 15.0%
!! TTATAAAAAACTGAATCTTT+AGG - Chr1:97848573-97848592 None:intergenic 15.0%
!!! AAGAATCTTTTCTTATATAT+AGG - Chr1:97847600-97847619 None:intergenic 15.0%
!!! AATTTGAGATATAAGTTAAT+GGG - Chr1:97851294-97851313 None:intergenic 15.0%
!!! ATAGTTTGCTTTTTATATAT+CGG + Chr1:97849887-97849906 MsG0180005944.01.T01:intron 15.0%
!!! ATGGTTTGTTTTTTATATAT+CGG + Chr1:97849934-97849953 MsG0180005944.01.T01:intron 15.0%
!!! TTAATAGTCATTTCAATTTT+TGG - Chr1:97851204-97851223 None:intergenic 15.0%
!! AAAAACAGTACATATGTATA+AGG - Chr1:97849737-97849756 None:intergenic 20.0%
!! AAAAATATTGAGAATGAATG+TGG + Chr1:97847256-97847275 MsG0180005944.01.T01:intron 20.0%
!! AAATACTATAGATTAGTGTT+TGG + Chr1:97848938-97848957 MsG0180005944.01.T01:intron 20.0%
!! AATACTATAGATTAGTGTTT+GGG + Chr1:97848939-97848958 MsG0180005944.01.T01:intron 20.0%
!! AGAAAATCAGAAAAAATTCA+AGG - Chr1:97847147-97847166 None:intergenic 20.0%
!! ATAAATTGTTTAAACTGTGT+AGG + Chr1:97849046-97849065 MsG0180005944.01.T01:intron 20.0%
!! ATAGTAATCTATGAAAAGAT+AGG - Chr1:97849770-97849789 None:intergenic 20.0%
!! CAATTATCAGAATTTAATAG+AGG + Chr1:97852662-97852681 MsG0180005944.01.T01:intron 20.0%
!! CATAGTAATTTGAATTACAA+AGG - Chr1:97848621-97848640 None:intergenic 20.0%
!! GACTATTAACTTTATATTAC+TGG + Chr1:97851215-97851234 MsG0180005944.01.T01:intron 20.0%
!! GTAATAATCGAATTCAAAAA+AGG - Chr1:97848020-97848039 None:intergenic 20.0%
!! TAAATTATTCAGACCATAAA+CGG - Chr1:97852045-97852064 None:intergenic 20.0%
!! TAAGGTTATGACTTAAAATT+GGG + Chr1:97848820-97848839 MsG0180005944.01.T01:intron 20.0%
!! TAATTCAAATTACTATGTCT+GGG + Chr1:97848624-97848643 MsG0180005944.01.T01:intron 20.0%
!! TCAAAAGTAACAAAGTTTAT+TGG + Chr1:97850867-97850886 MsG0180005944.01.T01:intron 20.0%
!! TTAAGGTTATGACTTAAAAT+TGG + Chr1:97848819-97848838 MsG0180005944.01.T01:intron 20.0%
!!! AAAAATTTAGAATCTTGTCA+GGG - Chr1:97848731-97848750 None:intergenic 20.0%
!!! AAATCGATTTATCTAATCTT+GGG + Chr1:97850094-97850113 MsG0180005944.01.T01:CDS 20.0%
!!! ATCTATGAATCAATTTTGAA+TGG - Chr1:97851663-97851682 None:intergenic 20.0%
!!! GAATTTGAGATATAAGTTAA+TGG - Chr1:97851295-97851314 None:intergenic 20.0%
!!! GTTGATTTACCAAAATATAT+TGG + Chr1:97850994-97851013 MsG0180005944.01.T01:intron 20.0%
!!! TAATTTGTCTGTTATTTTTC+TGG + Chr1:97853000-97853019 MsG0180005944.01.T01:intron 20.0%
!!! TATAATTTTTTCCCTTTTCT+GGG + Chr1:97849476-97849495 MsG0180005944.01.T01:intron 20.0%
!!! TGAATTTTTTCTGATTTTCT+GGG + Chr1:97847147-97847166 MsG0180005944.01.T01:intron 20.0%
!!! TTGAATTTTTTCTGATTTTC+TGG + Chr1:97847146-97847165 MsG0180005944.01.T01:intron 20.0%
! AAAACATGAGTCATTTGTTT+CGG + Chr1:97849705-97849724 MsG0180005944.01.T01:intron 25.0%
! AACTTTGACAACAACAAATA+AGG - Chr1:97850726-97850745 None:intergenic 25.0%
! AATGAAAAAAGGTAGAATTG+AGG - Chr1:97848135-97848154 None:intergenic 25.0%
! AATTGAACAAACCACTTATT+AGG + Chr1:97848060-97848079 MsG0180005944.01.T01:intron 25.0%
! ACTTTGACAACAACAAATAA+GGG - Chr1:97850725-97850744 None:intergenic 25.0%
! AGATAAAGATAAAGAGAAAG+AGG + Chr1:97848188-97848207 MsG0180005944.01.T01:CDS 25.0%
! ATAAAGATAAAGAGAAAGAG+GGG + Chr1:97848190-97848209 MsG0180005944.01.T01:CDS 25.0%
! ATAAATCAGGCAAAAAGAAA+TGG + Chr1:97853203-97853222 MsG0180005944.01.T01:CDS 25.0%
! ATCTCTGCAATAAATACTTA+AGG - Chr1:97850784-97850803 None:intergenic 25.0%
! ATGAAAAAAGGTAGAATTGA+GGG - Chr1:97848134-97848153 None:intergenic 25.0%
! ATTCGAATCAGAATATAGAA+AGG + Chr1:97852271-97852290 MsG0180005944.01.T01:CDS 25.0%
! CATAAAACAGACAACTAAAA+AGG + Chr1:97850913-97850932 MsG0180005944.01.T01:intron 25.0%
! GATAAAGATAAAGAGAAAGA+GGG + Chr1:97848189-97848208 MsG0180005944.01.T01:CDS 25.0%
! GCATAATATTAGTAAACACT+AGG + Chr1:97851364-97851383 MsG0180005944.01.T01:intron 25.0%
! GTAATTCAAATTACTATGTC+TGG + Chr1:97848623-97848642 MsG0180005944.01.T01:intron 25.0%
! GTATGGATATTATGTCTATT+TGG + Chr1:97851861-97851880 MsG0180005944.01.T01:CDS 25.0%
! TATACATTCAAAATGCTCAA+TGG - Chr1:97847752-97847771 None:intergenic 25.0%
! TCAGAATTTAATAGAGGAAA+AGG + Chr1:97852668-97852687 MsG0180005944.01.T01:intron 25.0%
! TCATAACCATTCAAATTGAA+GGG - Chr1:97848902-97848921 None:intergenic 25.0%
! TCTCATTGGACAAAAAATAT+GGG - Chr1:97853493-97853512 None:intergenic 25.0%
! TCTCTGCAATAAATACTTAA+GGG - Chr1:97850783-97850802 None:intergenic 25.0%
! TTAGGAAACATAAAGACTAA+AGG - Chr1:97848555-97848574 None:intergenic 25.0%
! TTCATAGATTACTATCCTTT+CGG + Chr1:97849775-97849794 MsG0180005944.01.T01:intron 25.0%
! TTGTTCTTATTCCACTTATA+TGG + Chr1:97850399-97850418 MsG0180005944.01.T01:intron 25.0%
! TTTAACAAAAATCGGGATTT+CGG - Chr1:97847202-97847221 None:intergenic 25.0%
! TTTATCCAGATGATAAAAAC+AGG - Chr1:97851499-97851518 None:intergenic 25.0%
!! AAAATTTAGAATCTTGTCAG+GGG - Chr1:97848730-97848749 None:intergenic 25.0%
!! CAAAAATTTAGAATCTTGTC+AGG - Chr1:97848732-97848751 None:intergenic 25.0%
!! CTGAAAAAACACTCATTTTA+AGG + Chr1:97848802-97848821 MsG0180005944.01.T01:intron 25.0%
!! GAAATCGATTTATCTAATCT+TGG + Chr1:97850093-97850112 MsG0180005944.01.T01:CDS 25.0%
!! GCATTGTTTCTTACTTTATT+TGG + Chr1:97850203-97850222 MsG0180005944.01.T01:intron 25.0%
!! TCTTTTCTTATATATAGGAC+CGG - Chr1:97847595-97847614 None:intergenic 25.0%
!!! AAAACAAAAGTTTTGGCTAA+TGG + Chr1:97849390-97849409 MsG0180005944.01.T01:intron 25.0%
!!! AAGTTTGAAGGAATTGATTT+TGG - Chr1:97851524-97851543 None:intergenic 25.0%
!!! AATTCGAGTTGATATTGTTT+AGG + Chr1:97852122-97852141 MsG0180005944.01.T01:intron 25.0%
!!! ACAAAGTTTATTGGTTTTCT+TGG + Chr1:97850876-97850895 MsG0180005944.01.T01:intron 25.0%
!!! ATAATTTTTTCCCTTTTCTG+GGG + Chr1:97849477-97849496 MsG0180005944.01.T01:intron 25.0%
!!! ATTGTTTTTTTTTGCTTGCT+TGG + Chr1:97852074-97852093 MsG0180005944.01.T01:intron 25.0%
!!! CTATAATTTTTTCCCTTTTC+TGG + Chr1:97849475-97849494 MsG0180005944.01.T01:intron 25.0%
!!! CTTAAAATGAGTGTTTTTTC+AGG - Chr1:97848804-97848823 None:intergenic 25.0%
!!! GAATTTTTTCTGATTTTCTG+GGG + Chr1:97847148-97847167 MsG0180005944.01.T01:intron 25.0%
!!! TTGTTTTTTTTTGCTTGCTT+GGG + Chr1:97852075-97852094 MsG0180005944.01.T01:intron 25.0%
AACAGACAACTAAAAAGGAA+TGG + Chr1:97850918-97850937 MsG0180005944.01.T01:intron 30.0%
AAGCAATGCAATAATCTTCT+TGG + Chr1:97850369-97850388 MsG0180005944.01.T01:intron 30.0%
AATGAGGTAGAAAGTGAAAA+AGG - Chr1:97848365-97848384 None:intergenic 30.0%
AATTAAACCAAAGCAGCATT+GGG + Chr1:97847722-97847741 MsG0180005944.01.T01:intron 30.0%
AATTCAAGAACACAAGAAAC+TGG - Chr1:97847860-97847879 None:intergenic 30.0%
AGTAGCTGTTGAATGAAAAA+AGG - Chr1:97848146-97848165 None:intergenic 30.0%
AGTAGTTGTGCAATTACAAT+TGG + Chr1:97851712-97851731 MsG0180005944.01.T01:intron 30.0%
ATAGAAGTAAGATGTCAAGA+TGG - Chr1:97849509-97849528 None:intergenic 30.0%
ATCTTTCTATTCGAACAACA+CGG - Chr1:97848172-97848191 None:intergenic 30.0%
ATGAGGTAGAAAGTGAAAAA+GGG - Chr1:97848364-97848383 None:intergenic 30.0%
ATTAAAAGGAGAGTTGTATC+AGG - Chr1:97850007-97850026 None:intergenic 30.0%
ATTAAATGTGTTCTGCTCTT+CGG + Chr1:97852947-97852966 MsG0180005944.01.T01:intron 30.0%
ATTTACCAAGTTATCTAGCT+TGG + Chr1:97849422-97849441 MsG0180005944.01.T01:intron 30.0%
CACAAGATTTGAAAGTTTGA+AGG - Chr1:97851536-97851555 None:intergenic 30.0%
CATAACAGCATGAATTTCTA+TGG + Chr1:97851442-97851461 MsG0180005944.01.T01:intron 30.0%
CTCATAACCATTCAAATTGA+AGG - Chr1:97848903-97848922 None:intergenic 30.0%
CTGATCTCTATATAATTGAC+AGG + Chr1:97849161-97849180 MsG0180005944.01.T01:intron 30.0%
CTTCAATTTGAATGGTTATG+AGG + Chr1:97848901-97848920 MsG0180005944.01.T01:intron 30.0%
GAAACATAAAGACTAAAGGT+TGG - Chr1:97848551-97848570 None:intergenic 30.0%
GATATCACAGAAACTCTAAT+AGG + Chr1:97851102-97851121 MsG0180005944.01.T01:intron 30.0%
GCATATAAAAGACCAAAACA+AGG - Chr1:97852728-97852747 None:intergenic 30.0%
GTATTGTTTGACCTAATAAG+TGG - Chr1:97848074-97848093 None:intergenic 30.0%
GTCTCATTGGACAAAAAATA+TGG - Chr1:97853494-97853513 None:intergenic 30.0%
TAATATTTACGCTCTCTGAA+AGG - Chr1:97853692-97853711 None:intergenic 30.0%
TAATCTATGAAAAGATAGGC+AGG - Chr1:97849766-97849785 None:intergenic 30.0%
TAATTAAACCAAAGCAGCAT+TGG + Chr1:97847721-97847740 MsG0180005944.01.T01:intron 30.0%
TATTTCGAACAAGATGCAAA+CGG + Chr1:97850622-97850641 MsG0180005944.01.T01:CDS 30.0%
TCAGATAGTAAGGATAAATC+AGG + Chr1:97853190-97853209 MsG0180005944.01.T01:CDS 30.0%
TCTGAAAGAAAGAAAGAAAC+AGG - Chr1:97847913-97847932 None:intergenic 30.0%
TGAATGATGATTAATCTCAC+AGG + Chr1:97851153-97851172 MsG0180005944.01.T01:intron 30.0%
TGAGTAAAAAGCGAAAAATG+AGG - Chr1:97848381-97848400 None:intergenic 30.0%
TGATAAAAACAGGAAACACA+AGG - Chr1:97851489-97851508 None:intergenic 30.0%
TTAACAAAAATCGGGATTTC+GGG - Chr1:97847201-97847220 None:intergenic 30.0%
TTCAGAAAAGGATCACATTA+AGG - Chr1:97852343-97852362 None:intergenic 30.0%
TTGACATCTTACTTCTATGA+TGG + Chr1:97849511-97849530 MsG0180005944.01.T01:intron 30.0%
TTGCAATAGCAACATACTAT+CGG - Chr1:97852641-97852660 None:intergenic 30.0%
TTTATAACTGTAGCATGTGT+TGG - Chr1:97852440-97852459 None:intergenic 30.0%
! ACACATATATTTGCCGTTTA+TGG + Chr1:97852029-97852048 MsG0180005944.01.T01:CDS 30.0%
! ACAGGTTAATTAGGATTTTG+GGG - Chr1:97848775-97848794 None:intergenic 30.0%
! ATGGAATTTTGGATTTTGAG+GGG + Chr1:97847082-97847101 MsG0180005944.01.T01:CDS 30.0%
! CAGCATGAAAACAAAAGTTT+TGG + Chr1:97849383-97849402 MsG0180005944.01.T01:intron 30.0%
! CTACAATGTTTTCATTTGCT+TGG + Chr1:97853381-97853400 MsG0180005944.01.T01:three_prime_UTR 30.0%
! CTATTTTGCCTATGTATATC+AGG + Chr1:97850044-97850063 MsG0180005944.01.T01:intron 30.0%
! CTCAATATCCTGAAGTTTTT+GGG - Chr1:97852216-97852235 None:intergenic 30.0%
! GACAGGTTAATTAGGATTTT+GGG - Chr1:97848776-97848795 None:intergenic 30.0%
! GTGAAACACATTTTATCATC+TGG + Chr1:97851553-97851572 MsG0180005944.01.T01:intron 30.0%
! TTGATGACCTTCAAAATCTA+GGG - Chr1:97848489-97848508 None:intergenic 30.0%
! TTGGTTTCTTTTCTTTGTTG+CGG + Chr1:97851880-97851899 MsG0180005944.01.T01:CDS 30.0%
!! AGGCTCAAATTTTAAGAAAG+AGG + Chr1:97852234-97852253 MsG0180005944.01.T01:CDS 30.0%
!! CGTTTTGATATAATTTACCC+TGG + Chr1:97852917-97852936 MsG0180005944.01.T01:intron 30.0%
!! GTCATTTCAATTTTTGGAAG+AGG - Chr1:97851198-97851217 None:intergenic 30.0%
!! TACAAAAGCACCACTTAAAA+AGG - Chr1:97850691-97850710 None:intergenic 30.0%
!! TGGTTGGTTAATTTGTTCAT+TGG + Chr1:97853422-97853441 MsG0180005944.01.T01:three_prime_UTR 30.0%
!!! AAGCAATGTGCTCATTTTTT+TGG + Chr1:97850441-97850460 MsG0180005944.01.T01:CDS 30.0%
!!! ACATTTTCAAGTGTACAGAA+TGG + Chr1:97851821-97851840 MsG0180005944.01.T01:CDS 30.0%
!!! ATAGCTTGAAGTTTGTTTTG+TGG + Chr1:97852316-97852335 MsG0180005944.01.T01:intron 30.0%
!!! ATGAGTGTTTTTTCAGGTTT+TGG - Chr1:97848798-97848817 None:intergenic 30.0%
!!! TGCCTTTTTTACAATGATTC+CGG + Chr1:97850550-97850569 MsG0180005944.01.T01:intron 30.0%
!!! TGTTTCCTGTTTTTATCATC+TGG + Chr1:97851491-97851510 MsG0180005944.01.T01:intron 30.0%
AAAAGGTAGAATTGAGGGTT+TGG - Chr1:97848129-97848148 None:intergenic 35.0%
AAACAGGACATATCGAAAAC+AGG - Chr1:97852815-97852834 None:intergenic 35.0%
AAACGCCTAAAACTTCGTAA+GGG - Chr1:97848273-97848292 None:intergenic 35.0%
AAAGCATAAGAAAAGCTTGC+AGG - Chr1:97849549-97849568 None:intergenic 35.0%
AAAGGTAGAATTGAGGGTTT+GGG - Chr1:97848128-97848147 None:intergenic 35.0%
AAATGCATGAATTGACCGAA+AGG - Chr1:97849793-97849812 None:intergenic 35.0%
AACAGCATGAATTTCTATGG+TGG + Chr1:97851445-97851464 MsG0180005944.01.T01:intron 35.0%
AACTAGCTATGACTAATCAG+AGG - Chr1:97849006-97849025 None:intergenic 35.0%
AACTGCACAAAGCAAATTCA+AGG + Chr1:97850518-97850537 MsG0180005944.01.T01:intron 35.0%
AAGAACACAAGAAACTGGTT+TGG - Chr1:97847855-97847874 None:intergenic 35.0%
AAGGGAAAAGAGAGAGATTA+TGG - Chr1:97848001-97848020 None:intergenic 35.0%
ACACATTTAATAGTAGTGCC+AGG - Chr1:97852938-97852957 None:intergenic 35.0%
ACATATACATCTCAGAAGAG+AGG + Chr1:97849571-97849590 MsG0180005944.01.T01:intron 35.0%
ACCACTTAAAAAGGAACGTA+GGG - Chr1:97850682-97850701 None:intergenic 35.0%
ACTAGCTATGACTAATCAGA+GGG - Chr1:97849005-97849024 None:intergenic 35.0%
AGAAAGCCCTTCAATTTGAA+TGG + Chr1:97848893-97848912 MsG0180005944.01.T01:intron 35.0%
AGACAACTAAAAAGGAATGG+AGG + Chr1:97850921-97850940 MsG0180005944.01.T01:intron 35.0%
AGACACAAGTAAAAGGGAAA+TGG - Chr1:97851340-97851359 None:intergenic 35.0%
AGCCGGAATCATTGTAAAAA+AGG - Chr1:97850555-97850574 None:intergenic 35.0%
AGCTTCAGAACTATTCAAAG+AGG + Chr1:97849216-97849235 MsG0180005944.01.T01:CDS 35.0%
AGGCTTGATAAAGGAAAAGA+AGG - Chr1:97853607-97853626 None:intergenic 35.0%
AGGGAAAAGAGAGAGATTAT+GGG - Chr1:97848000-97848019 None:intergenic 35.0%
AGTAACTCTTACTACAATCC+CGG - Chr1:97850496-97850515 None:intergenic 35.0%
AGTGGCAGTAATTTAAGCAA+TGG + Chr1:97853106-97853125 MsG0180005944.01.T01:CDS 35.0%
ATATGTTGAGGATGCTACAA+GGG - Chr1:97853532-97853551 None:intergenic 35.0%
ATCAAGTGCCTGATATACAT+AGG - Chr1:97850055-97850074 None:intergenic 35.0%
ATCGAAGAAAAGAAGAGCTT+TGG - Chr1:97849341-97849360 None:intergenic 35.0%
ATGGTTCAACCTCAATCTTA+AGG + Chr1:97853222-97853241 MsG0180005944.01.T01:CDS 35.0%
ATTTCGAACAAGATGCAAAC+GGG + Chr1:97850623-97850642 MsG0180005944.01.T01:CDS 35.0%
CACATTTAATAGTAGTGCCA+GGG - Chr1:97852937-97852956 None:intergenic 35.0%
CAGATTGTAATATTGAACGC+TGG + Chr1:97850585-97850604 MsG0180005944.01.T01:intron 35.0%
CAGCATAATCGAATTACCTA+AGG + Chr1:97848701-97848720 MsG0180005944.01.T01:intron 35.0%
CCAAAAACTTCAGGATATTG+AGG + Chr1:97852214-97852233 MsG0180005944.01.T01:CDS 35.0%
CTACTGCTATTACTATGACA+TGG - Chr1:97848101-97848120 None:intergenic 35.0%
GACAACTAAAAAGGAATGGA+GGG + Chr1:97850922-97850941 MsG0180005944.01.T01:intron 35.0%
GAGATCAGTGTTATCAATTG+TGG - Chr1:97849149-97849168 None:intergenic 35.0%
GCAACAAATTGCCATATAAG+TGG - Chr1:97850413-97850432 None:intergenic 35.0%
GCTACAAGACACAAGTAAAA+GGG - Chr1:97851346-97851365 None:intergenic 35.0%
GCTGCTTGCATTAATGTAAA+TGG + Chr1:97849868-97849887 MsG0180005944.01.T01:intron 35.0%
GCTTTCTTAAACTCATTCCA+AGG - Chr1:97848880-97848899 None:intergenic 35.0%
GTCTATGCAATTGTCTATAC+AGG + Chr1:97851749-97851768 MsG0180005944.01.T01:intron 35.0%
TAAAAATACAACCACGTGCA+AGG - Chr1:97851404-97851423 None:intergenic 35.0%
TAAAAGGGAAATGGAGATGA+GGG - Chr1:97851331-97851350 None:intergenic 35.0%
TAAATAACAATCCTTGCACG+TGG + Chr1:97851390-97851409 MsG0180005944.01.T01:intron 35.0%
TAAGAAAGAGGAATGAGCTA+CGG + Chr1:97852246-97852265 MsG0180005944.01.T01:CDS 35.0%
TACAATGATTCCGGCTAATA+TGG + Chr1:97850559-97850578 MsG0180005944.01.T01:intron 35.0%
TACACTTTGCTAAGACACTT+TGG - Chr1:97847559-97847578 None:intergenic 35.0%
TATATGTTGAGGATGCTACA+AGG - Chr1:97853533-97853552 None:intergenic 35.0%
TCGGAAAATTTGAGTCTCAT+TGG - Chr1:97853507-97853526 None:intergenic 35.0%
TCTATGGATCAAAAGATGGA+AGG + Chr1:97848220-97848239 MsG0180005944.01.T01:CDS 35.0%
TCTTCAACCTTGTGAAGTTT+CGG + Chr1:97851992-97852011 MsG0180005944.01.T01:CDS 35.0%
TGCTACAAGACACAAGTAAA+AGG - Chr1:97851347-97851366 None:intergenic 35.0%
TGGTAAATCAACAAGTCGAA+GGG - Chr1:97850986-97851005 None:intergenic 35.0%
TGGTTCAACCTCAATCTTAA+GGG + Chr1:97853223-97853242 MsG0180005944.01.T01:CDS 35.0%
TTCAAGAACATTAGCCGAAA+TGG - Chr1:97850261-97850280 None:intergenic 35.0%
TTGCACTCAACAGAAACTTT+AGG + Chr1:97848664-97848683 MsG0180005944.01.T01:intron 35.0%
TTGGTAAATCAACAAGTCGA+AGG - Chr1:97850987-97851006 None:intergenic 35.0%
TTTCTTATATATAGGACCGG+AGG - Chr1:97847592-97847611 None:intergenic 35.0%
TTTGCTAAGACACTTTGGAT+TGG - Chr1:97847554-97847573 None:intergenic 35.0%
TTTGGAAGAGGTAAAACCAT+GGG - Chr1:97851186-97851205 None:intergenic 35.0%
! AAACAAGGATAAGCATCGTA+TGG - Chr1:97852713-97852732 None:intergenic 35.0%
! AATGGATTCAACTGTGAATG+CGG + Chr1:97851839-97851858 MsG0180005944.01.T01:CDS 35.0%
! ATCTCGCTATAGCTTTTCTA+GGG + Chr1:97849102-97849121 MsG0180005944.01.T01:intron 35.0%
! CCTCAATATCCTGAAGTTTT+TGG - Chr1:97852217-97852236 None:intergenic 35.0%
! GCTTTCTTTAAAAGGTTGGA+AGG + Chr1:97851969-97851988 MsG0180005944.01.T01:CDS 35.0%
! GGAAGTTCTAGCAAAATTTC+TGG + Chr1:97853127-97853146 MsG0180005944.01.T01:CDS 35.0%
! GGACAGGTTAATTAGGATTT+TGG - Chr1:97848777-97848796 None:intergenic 35.0%
! GTTTTCCAAGCTAGATAACT+TGG - Chr1:97849430-97849449 None:intergenic 35.0%
! TAGTAATATTTTGTGCCGCA+AGG - Chr1:97853627-97853646 None:intergenic 35.0%
! TATCTCGCTATAGCTTTTCT+AGG + Chr1:97849101-97849120 MsG0180005944.01.T01:intron 35.0%
! TCCTTTTCTGAATACGTTTC+AGG + Chr1:97852351-97852370 MsG0180005944.01.T01:intron 35.0%
! TGGTTTCTTTTCTTTGTTGC+GGG + Chr1:97851881-97851900 MsG0180005944.01.T01:CDS 35.0%
! TGTAGAACCCTAGATTTTGA+AGG + Chr1:97848479-97848498 MsG0180005944.01.T01:intron 35.0%
! TTATTTGGTAACAGCAAGCT+GGG + Chr1:97850218-97850237 MsG0180005944.01.T01:intron 35.0%
! TTTAGTTCCGAAACTTCACA+AGG - Chr1:97852002-97852021 None:intergenic 35.0%
! TTTATTTGGTAACAGCAAGC+TGG + Chr1:97850217-97850236 MsG0180005944.01.T01:intron 35.0%
! TTTTCCTTTATCAAGCCTTG+CGG + Chr1:97853609-97853628 MsG0180005944.01.T01:three_prime_UTR 35.0%
!! AATATCCTGAAGTTTTTGGG+TGG - Chr1:97852213-97852232 None:intergenic 35.0%
!! ATTTCTGGTGAAGATTCCAA+AGG + Chr1:97853142-97853161 MsG0180005944.01.T01:CDS 35.0%
!! CAATGTTTGCAGCTTTATTC+AGG + Chr1:97850127-97850146 MsG0180005944.01.T01:CDS 35.0%
!! CTTATATGGCAATTTGTTGC+AGG + Chr1:97850413-97850432 MsG0180005944.01.T01:intron 35.0%
!! GTTCTTGAAGAAGCTTTGAA+TGG + Chr1:97850272-97850291 MsG0180005944.01.T01:CDS 35.0%
!! GTTGATGACCTTCAAAATCT+AGG - Chr1:97848490-97848509 None:intergenic 35.0%
!! TACGATGCTTATCCTTGTTT+TGG + Chr1:97852713-97852732 MsG0180005944.01.T01:intron 35.0%
!! TTGAATAGTTCTGAAGCTTC+AGG - Chr1:97849214-97849233 None:intergenic 35.0%
!! TTGGTTTGTGATGCAATCAA+AGG + Chr1:97853441-97853460 MsG0180005944.01.T01:three_prime_UTR 35.0%
!! TTTTGGAAGAGGTAAAACCA+TGG - Chr1:97851187-97851206 None:intergenic 35.0%
!!! AAAGTTTTGGCTAATGGCAT+AGG + Chr1:97849396-97849415 MsG0180005944.01.T01:intron 35.0%
!!! AGCGGTTTTAATTTCCTGAT+CGG - Chr1:97848308-97848327 None:intergenic 35.0%
!!! AGGTTTTGGACAGGTTAATT+AGG - Chr1:97848784-97848803 None:intergenic 35.0%
!!! TGTTATTTTTCTGGTTACCC+AGG + Chr1:97853009-97853028 MsG0180005944.01.T01:intron 35.0%
!!! TGTTTTTTCAGGTTTTGGAC+AGG - Chr1:97848793-97848812 None:intergenic 35.0%
AAGTTTGATCCCATGACTGA+TGG - Chr1:97853325-97853344 None:intergenic 40.0%
ACAACTTAATGGAGCAGATG+GGG - Chr1:97852569-97852588 None:intergenic 40.0%
ACAGTGAGAATCTGCAGAAA+TGG - Chr1:97852841-97852860 None:intergenic 40.0%
ACTACACCCAATATATCCAC+GGG - Chr1:97853355-97853374 None:intergenic 40.0%
AGATACCACCCAAAAACTTC+AGG + Chr1:97852205-97852224 MsG0180005944.01.T01:CDS 40.0%
AGTGTACTTACTACTTCCTC+CGG + Chr1:97847573-97847592 MsG0180005944.01.T01:intron 40.0%
ATGAATGTGGAAGTGACATG+TGG + Chr1:97847269-97847288 MsG0180005944.01.T01:intron 40.0%
ATTCAACTGTGAATGCGGTA+TGG + Chr1:97851844-97851863 MsG0180005944.01.T01:CDS 40.0%
CAATCTGATGCCATATTAGC+CGG - Chr1:97850572-97850591 None:intergenic 40.0%
CACAACTTAATGGAGCAGAT+GGG - Chr1:97852570-97852589 None:intergenic 40.0%
CACCACTTAAAAAGGAACGT+AGG - Chr1:97850683-97850702 None:intergenic 40.0%
CACTACACCCAATATATCCA+CGG - Chr1:97853356-97853375 None:intergenic 40.0%
CACTCAAATTCCAAGTTGCA+GGG - Chr1:97849619-97849638 None:intergenic 40.0%
CAGGTCTATGGATCAAAAGA+TGG + Chr1:97848216-97848235 MsG0180005944.01.T01:CDS 40.0%
CCCAATCAAGACTACCATTT+CGG + Chr1:97850244-97850263 MsG0180005944.01.T01:CDS 40.0%
GAAAAGAGAGAGATTATGGG+TGG - Chr1:97847997-97848016 None:intergenic 40.0%
GAAAAGCTATAGCGAGATAG+CGG - Chr1:97849100-97849119 None:intergenic 40.0%
GAAACGCCTAAAACTTCGTA+AGG - Chr1:97848274-97848293 None:intergenic 40.0%
GATTGTTGGCATTCTTGTCA+GGG - Chr1:97849192-97849211 None:intergenic 40.0%
GCCTGAAACGTATTCAGAAA+AGG - Chr1:97852355-97852374 None:intergenic 40.0%
GGGTTCTACAGTTGTACTAA+TGG - Chr1:97848469-97848488 None:intergenic 40.0%
GGGTTGTGATGATTTGAATG+AGG - Chr1:97848755-97848774 None:intergenic 40.0%
GTAAAAGGGAAATGGAGATG+AGG - Chr1:97851332-97851351 None:intergenic 40.0%
TACCTCGGAATGTGTTTGTT+AGG - Chr1:97847945-97847964 None:intergenic 40.0%
TATCTGACCCAGAAAAGAGA+AGG + Chr1:97849260-97849279 MsG0180005944.01.T01:CDS 40.0%
TCACTCAAATTCCAAGTTGC+AGG - Chr1:97849620-97849639 None:intergenic 40.0%
TCTGAATACGTTTCAGGCAT+TGG + Chr1:97852357-97852376 MsG0180005944.01.T01:intron 40.0%
TCTGCAGAAATGGTGAAAAC+AGG - Chr1:97852831-97852850 None:intergenic 40.0%
TGACAATGGTGAAGGTAGAA+TGG - Chr1:97853066-97853085 None:intergenic 40.0%
TGGATTCACATGGAAAGAAG+AGG - Chr1:97849321-97849340 None:intergenic 40.0%
TTACAACCTCAACCTACTCA+TGG - Chr1:97851045-97851064 None:intergenic 40.0%
TTGATACACTCACCATGAGT+AGG + Chr1:97851030-97851049 MsG0180005944.01.T01:intron 40.0%
TTTCGAACAAGATGCAAACG+GGG + Chr1:97850624-97850643 MsG0180005944.01.T01:CDS 40.0%
! ACCTCGGAATGTGTTTGTTA+GGG - Chr1:97847944-97847963 None:intergenic 40.0%
! ACTGGCATTTTCTTCAAGCA+TGG + Chr1:97851233-97851252 MsG0180005944.01.T01:intron 40.0%
! AGTTGCAGATTTTTCTCACC+TGG + Chr1:97852602-97852621 MsG0180005944.01.T01:intron 40.0%
! CCGAAATGGTAGTCTTGATT+GGG - Chr1:97850247-97850266 None:intergenic 40.0%
! GAGAGCAAGTTTTCTGTAAG+CGG - Chr1:97848326-97848345 None:intergenic 40.0%
! GATTCAAAGTGGCATTGGAT+CGG - Chr1:97847969-97847988 None:intergenic 40.0%
! TCTAGCTTGCCACAACTTAA+TGG - Chr1:97852580-97852599 None:intergenic 40.0%
! TGTTTTCATGCTGCCGAAAA+GGG - Chr1:97849376-97849395 None:intergenic 40.0%
! TTGTTTTCATGCTGCCGAAA+AGG - Chr1:97849377-97849396 None:intergenic 40.0%
! TTTATCTCTCCCTCCCTTTT+CGG + Chr1:97849360-97849379 MsG0180005944.01.T01:intron 40.0%
! TTTTTCTCACCTGGCTTACT+TGG + Chr1:97852611-97852630 MsG0180005944.01.T01:intron 40.0%
!! ACTAAAGGTTGGTGCCTTTA+GGG - Chr1:97848540-97848559 None:intergenic 40.0%
!! AGAAGAGCTTTGGATTCACA+TGG - Chr1:97849331-97849350 None:intergenic 40.0%
!! AGATGAGCTTCTGAAGCAAA+GGG + Chr1:97853033-97853052 MsG0180005944.01.T01:CDS 40.0%
!! CTGATTTTCTGGGGATGTTT+CGG + Chr1:97847157-97847176 MsG0180005944.01.T01:intron 40.0%
!! GAATTTTGGATTTTGAGGGG+CGG + Chr1:97847085-97847104 MsG0180005944.01.T01:CDS 40.0%
!! GGAGTAAAAGAAGAAGCACT+AGG - Chr1:97850956-97850975 None:intergenic 40.0%
!! TAGATGAGCTTCTGAAGCAA+AGG + Chr1:97853032-97853051 MsG0180005944.01.T01:CDS 40.0%
!! TCCCTACGTTCCTTTTTAAG+TGG + Chr1:97850678-97850697 MsG0180005944.01.T01:intron 40.0%
!! TTCTGAAGCTTCAGGATTGT+TGG - Chr1:97849206-97849225 None:intergenic 40.0%
!! TTGCAGCTTTATTCAGGTGT+GGG + Chr1:97850133-97850152 MsG0180005944.01.T01:intron 40.0%
!! TTTGCAGCTTTATTCAGGTG+TGG + Chr1:97850132-97850151 MsG0180005944.01.T01:intron 40.0%
!!! AGTGGTCACTTTTAGTGTTG+TGG + Chr1:97851914-97851933 MsG0180005944.01.T01:CDS 40.0%
AAAGCAGCCCGTGGATATAT+TGG + Chr1:97853345-97853364 MsG0180005944.01.T01:three_prime_UTR 45.0%
AACAAGTCGAAGGGAGATGA+GGG - Chr1:97850977-97850996 None:intergenic 45.0%
AACAGGAAACACAAGGCCAA+AGG - Chr1:97851482-97851501 None:intergenic 45.0%
AACCTCAATCTTAAGGGCTC+GGG + Chr1:97853229-97853248 MsG0180005944.01.T01:CDS 45.0%
AAGCAGCCCGTGGATATATT+GGG + Chr1:97853346-97853365 MsG0180005944.01.T01:three_prime_UTR 45.0%
ACAGATGTTCCCATTGGAAG+GGG - Chr1:97850314-97850333 None:intergenic 45.0%
ACGGCAAATATATGTGTGCC+AGG - Chr1:97852026-97852045 None:intergenic 45.0%
ACTGATGATCAGCTATGCTG+TGG - Chr1:97852538-97852557 None:intergenic 45.0%
AGAGGGTGAAAACTGATAGC+AGG - Chr1:97848988-97849007 None:intergenic 45.0%
AGATGGAGGGTCAGATAGTA+AGG + Chr1:97853180-97853199 MsG0180005944.01.T01:CDS 45.0%
ATCAAACTTAAAGCAGCCCG+TGG + Chr1:97853336-97853355 MsG0180005944.01.T01:three_prime_UTR 45.0%
CAACCTCAATCTTAAGGGCT+CGG + Chr1:97853228-97853247 MsG0180005944.01.T01:CDS 45.0%
CAGGAAGATAGTGAGAAGAC+TGG + Chr1:97851768-97851787 MsG0180005944.01.T01:intron 45.0%
CCAACCAGTTCACAACTTTG+AGG - Chr1:97853409-97853428 None:intergenic 45.0%
CCACAACTTAATGGAGCAGA+TGG - Chr1:97852571-97852590 None:intergenic 45.0%
CCATAGAAGGGACTTCTTAC+GGG - Chr1:97847114-97847133 None:intergenic 45.0%
CCCATAGAAGGGACTTCTTA+CGG - Chr1:97847115-97847134 None:intergenic 45.0%
CCGTAAGAAGTCCCTTCTAT+GGG + Chr1:97847112-97847131 MsG0180005944.01.T01:intron 45.0%
CCTCAAAGTTGTGAACTGGT+TGG + Chr1:97853406-97853425 MsG0180005944.01.T01:three_prime_UTR 45.0%
CTGAGGGGGCTTTCTTTAAA+AGG + Chr1:97851961-97851980 MsG0180005944.01.T01:CDS 45.0%
CTGATGATCAGCTATGCTGT+GGG - Chr1:97852537-97852556 None:intergenic 45.0%
CTTCAGAAGCTCATCTACCT+GGG - Chr1:97853029-97853048 None:intergenic 45.0%
CTTGAGTGACCATCAGTCAT+GGG + Chr1:97853313-97853332 MsG0180005944.01.T01:three_prime_UTR 45.0%
GAAACGCAAAAGAGCTTTCG+AGG - Chr1:97849974-97849993 None:intergenic 45.0%
GAAGTTTCGGAACTAAAGCC+TGG + Chr1:97852005-97852024 MsG0180005944.01.T01:CDS 45.0%
GACAGATGTTCCCATTGGAA+GGG - Chr1:97850315-97850334 None:intergenic 45.0%
GGATTGTTGGCATTCTTGTC+AGG - Chr1:97849193-97849212 None:intergenic 45.0%
GGTTCCTCAAAGTTGTGAAC+TGG + Chr1:97853402-97853421 MsG0180005944.01.T01:three_prime_UTR 45.0%
TAAAGAGAAAGAGGGGCTTC+AGG + Chr1:97848197-97848216 MsG0180005944.01.T01:CDS 45.0%
TCAAATTCCAAGTTGCAGGG+AGG - Chr1:97849616-97849635 None:intergenic 45.0%
TCCCTAACAAACACATTCCG+AGG + Chr1:97847940-97847959 MsG0180005944.01.T01:intron 45.0%
TGACAGATGTTCCCATTGGA+AGG - Chr1:97850316-97850335 None:intergenic 45.0%
TGAGGATGCTACAAGGGAAT+CGG - Chr1:97853526-97853545 None:intergenic 45.0%
TGATGATCAGCTATGCTGTG+GGG - Chr1:97852536-97852555 None:intergenic 45.0%
TGATGCTGATAGCATGGACA+TGG + Chr1:97850071-97850090 MsG0180005944.01.T01:CDS 45.0%
TGTAAGACCAAGTTGCGAGA+TGG - Chr1:97847809-97847828 None:intergenic 45.0%
TTCGAACAAGATGCAAACGG+GGG + Chr1:97850625-97850644 MsG0180005944.01.T01:CDS 45.0%
TTCGAAGGAATCATCCGATC+AGG + Chr1:97848291-97848310 MsG0180005944.01.T01:CDS 45.0%
! AAACCAAAGCAGCATTGGGA+TGG + Chr1:97847726-97847745 MsG0180005944.01.T01:intron 45.0%
! ATTCAACTGCAGAAGCGTGA+AGG - Chr1:97851138-97851157 None:intergenic 45.0%
! CCATCTGCTCCATTAAGTTG+TGG + Chr1:97852568-97852587 MsG0180005944.01.T01:intron 45.0%
! CGTACTGCCTTCTCTTTTCT+GGG - Chr1:97849270-97849289 None:intergenic 45.0%
! CGTGACCCTTACGAAGTTTT+AGG + Chr1:97848265-97848284 MsG0180005944.01.T01:CDS 45.0%
! GCCGAAATGGTAGTCTTGAT+TGG - Chr1:97850248-97850267 None:intergenic 45.0%
! GGGGGCTTTCTTTAAAAGGT+TGG + Chr1:97851965-97851984 MsG0180005944.01.T01:CDS 45.0%
! TCGTACTGCCTTCTCTTTTC+TGG - Chr1:97849271-97849290 None:intergenic 45.0%
! TTTCTTTGTTGCGGGCTGTT+TGG + Chr1:97851889-97851908 MsG0180005944.01.T01:CDS 45.0%
!! AGTACTGGTTGGCTTGACAA+TGG - Chr1:97853080-97853099 None:intergenic 45.0%
!! CTATAGCGAGATAGCGGATA+GGG - Chr1:97849094-97849113 None:intergenic 45.0%
!! CTTTTAAAGAAAGCCCCCTC+AGG - Chr1:97851963-97851982 None:intergenic 45.0%
!! GACTAAAGGTTGGTGCCTTT+AGG - Chr1:97848541-97848560 None:intergenic 45.0%
!! TATAGCGAGATAGCGGATAG+GGG - Chr1:97849093-97849112 None:intergenic 45.0%
!!! CGAAGTTTTAGGCGTTTCGA+AGG + Chr1:97848276-97848295 MsG0180005944.01.T01:CDS 45.0%
!! TAAGTAAAAAAAAAAAAAAA+AGG + Chr1:97847780-97847799 MsG0180005944.01.T01:intron 5.0%
!!! ATATTTTATTTAACAAAAAT+CGG - Chr1:97847210-97847229 None:intergenic 5.0%
!!! ATTTTTGTTAAATAAAATAT+TGG + Chr1:97847210-97847229 MsG0180005944.01.T01:intron 5.0%
!!! TTTTTTTATTTAAAAAAAAG+GGG + Chr1:97847526-97847545 MsG0180005944.01.T01:intron 5.0%
AAAGAGGGGCTTCAGGTCTA+TGG + Chr1:97848204-97848223 MsG0180005944.01.T01:CDS 50.0%
AACCCGAGCCCTTAAGATTG+AGG - Chr1:97853234-97853253 None:intergenic 50.0%
AAGGGAAATGGAGATGAGGG+TGG - Chr1:97851328-97851347 None:intergenic 50.0%
AATGAGCAGCAAGCTGAGTC+CGG + Chr1:97850474-97850493 MsG0180005944.01.T01:CDS 50.0%
ACAGTCAGACCCCTTCCAAT+GGG + Chr1:97850302-97850321 MsG0180005944.01.T01:CDS 50.0%
ACCCTAATCCCTCTCCCTAA+AGG + Chr1:97848523-97848542 MsG0180005944.01.T01:intron 50.0%
ACTGGCAAAGTGACATCTGC+TGG + Chr1:97851786-97851805 MsG0180005944.01.T01:CDS 50.0%
AGGACCATGACTCCCATAGA+AGG - Chr1:97847127-97847146 None:intergenic 50.0%
AGTCCCTTCTATGGGAGTCA+TGG + Chr1:97847120-97847139 MsG0180005944.01.T01:intron 50.0%
ATCTTGTCAGGGGCAACCTT+AGG - Chr1:97848720-97848739 None:intergenic 50.0%
ATGGCAAGCTCCCCAGAAAA+GGG - Chr1:97849490-97849509 None:intergenic 50.0%
ATTCCAAAGGTGAGAGCCCT+GGG + Chr1:97853155-97853174 MsG0180005944.01.T01:CDS 50.0%
CAACAAGTCGAAGGGAGATG+AGG - Chr1:97850978-97850997 None:intergenic 50.0%
CACGCGATTCAAAGTGGCAT+TGG - Chr1:97847974-97847993 None:intergenic 50.0%
CACTCACCATGAGTAGGTTG+AGG + Chr1:97851036-97851055 MsG0180005944.01.T01:intron 50.0%
CATATTGCCTCCCTGCAACT+TGG + Chr1:97849606-97849625 MsG0180005944.01.T01:intron 50.0%
CCAACCAGTACTAGTGGAAG+TGG + Chr1:97853088-97853107 MsG0180005944.01.T01:CDS 50.0%
CCAATGGGAACATCTGTCAG+TGG + Chr1:97850317-97850336 MsG0180005944.01.T01:CDS 50.0%
CCACTGACAGATGTTCCCAT+TGG - Chr1:97850320-97850339 None:intergenic 50.0%
CCCGTAAGAAGTCCCTTCTA+TGG + Chr1:97847111-97847130 MsG0180005944.01.T01:intron 50.0%
CTGTTGCTAGAGTAGCACCT+TGG + Chr1:97848860-97848879 MsG0180005944.01.T01:intron 50.0%
GAAATGGAGATGAGGGTGGA+GGG - Chr1:97851324-97851343 None:intergenic 50.0%
GCTTCAGAAGCTCATCTACC+TGG - Chr1:97853030-97853049 None:intergenic 50.0%
GCTTGAGTGACCATCAGTCA+TGG + Chr1:97853312-97853331 MsG0180005944.01.T01:three_prime_UTR 50.0%
GGACCATGACTCCCATAGAA+GGG - Chr1:97847126-97847145 None:intergenic 50.0%
GGATAGCAGAGCATAGTGTC+CGG - Chr1:97849128-97849147 None:intergenic 50.0%
GGCACTTGATGCTGATAGCA+TGG + Chr1:97850065-97850084 MsG0180005944.01.T01:intron 50.0%
GGGAACATCTGTCAGTGGAA+AGG + Chr1:97850322-97850341 MsG0180005944.01.T01:CDS 50.0%
GGGATTTCGGGCTACTTGAT+CGG - Chr1:97847189-97847208 None:intergenic 50.0%
GGGCTATGGTTTAGCATTGC+AGG + Chr1:97850645-97850664 MsG0180005944.01.T01:CDS 50.0%
GTACGACAGTGCAGGATTTG+AGG + Chr1:97849285-97849304 MsG0180005944.01.T01:CDS 50.0%
GTCAAGCCAACCAGTACTAG+TGG + Chr1:97853082-97853101 MsG0180005944.01.T01:CDS 50.0%
TAAGGGTCACGTCGAATTGC+TGG - Chr1:97848256-97848275 None:intergenic 50.0%
TACAGTCAGACCCCTTCCAA+TGG + Chr1:97850301-97850320 MsG0180005944.01.T01:CDS 50.0%
TCTCACAGGCAGATATCCCA+TGG + Chr1:97851167-97851186 MsG0180005944.01.T01:intron 50.0%
TGTGCCGCAAGGCTTGATAA+AGG - Chr1:97853616-97853635 None:intergenic 50.0%
TGTTGTGGTGCAGTTAGCGA+TGG + Chr1:97851929-97851948 MsG0180005944.01.T01:CDS 50.0%
TTCATGCTGCCGAAAAGGGA+GGG - Chr1:97849372-97849391 None:intergenic 50.0%
TTTCATGCTGCCGAAAAGGG+AGG - Chr1:97849373-97849392 None:intergenic 50.0%
! ACTGCCACTTCCACTAGTAC+TGG - Chr1:97853095-97853114 None:intergenic 50.0%
! GCCTTTAGGGAGAGGGATTA+GGG - Chr1:97848527-97848546 None:intergenic 50.0%
! GGTTTGGTTTCGCTAGAGTC+AGG - Chr1:97847839-97847858 None:intergenic 50.0%
! TGCCTTTAGGGAGAGGGATT+AGG - Chr1:97848528-97848547 None:intergenic 50.0%
! TGGCATTGGATCGGTTACCT+CGG - Chr1:97847960-97847979 None:intergenic 50.0%
!! ATAGCGAGATAGCGGATAGG+GGG - Chr1:97849092-97849111 None:intergenic 50.0%
!! CCACTTCCACTAGTACTGGT+TGG - Chr1:97853091-97853110 None:intergenic 50.0%
!! GAGCTTCTGAAGCAAAGGGA+CGG + Chr1:97853037-97853056 MsG0180005944.01.T01:CDS 50.0%
!! GCTATAGCGAGATAGCGGAT+AGG - Chr1:97849095-97849114 None:intergenic 50.0%
!! GGTTGGCTTGACAATGGTGA+AGG - Chr1:97853074-97853093 None:intergenic 50.0%
!!! CGCTATAGCTTTTCTAGGGC+CGG + Chr1:97849106-97849125 MsG0180005944.01.T01:intron 50.0%
AAGGACGCCATCTCGCAACT+TGG + Chr1:97847799-97847818 MsG0180005944.01.T01:intron 55.0%
AGAAGGCAGTACGACAGTGC+AGG + Chr1:97849277-97849296 MsG0180005944.01.T01:CDS 55.0%
ATCGGCAAGCCAAGTAAGCC+AGG - Chr1:97852623-97852642 None:intergenic 55.0%
ATGAGCAGCAAGCTGAGTCC+GGG + Chr1:97850475-97850494 MsG0180005944.01.T01:CDS 55.0%
CAAGATGCAAACGGGGGCTA+TGG + Chr1:97850631-97850650 MsG0180005944.01.T01:CDS 55.0%
GATGGCAAGCTCCCCAGAAA+AGG - Chr1:97849491-97849510 None:intergenic 55.0%
GATTCCAAAGGTGAGAGCCC+TGG + Chr1:97853154-97853173 MsG0180005944.01.T01:CDS 55.0%
GGAAATGGAGATGAGGGTGG+AGG - Chr1:97851325-97851344 None:intergenic 55.0%
GGTGGCTGCTAACAAGCCTT+TGG + Chr1:97851463-97851482 MsG0180005944.01.T01:intron 55.0%
TTCCAAAGGTGAGAGCCCTG+GGG + Chr1:97853156-97853175 MsG0180005944.01.T01:CDS 55.0%
! GGTTGGTGCCTTTAGGGAGA+GGG - Chr1:97848534-97848553 None:intergenic 55.0%
! GTTGCGGGCTGTTTGGAAAG+TGG + Chr1:97851896-97851915 MsG0180005944.01.T01:CDS 55.0%
! TGGCCATCCCAATGCTGCTT+TGG - Chr1:97847732-97847751 None:intergenic 55.0%
!! AGGTTGGTGCCTTTAGGGAG+AGG - Chr1:97848535-97848554 None:intergenic 55.0%
!! TCAGGCATTGGCACGCTATC+AGG + Chr1:97852369-97852388 MsG0180005944.01.T01:intron 55.0%
AGAGCCCTGGGGAAGATGGA+GGG + Chr1:97853167-97853186 MsG0180005944.01.T01:CDS 60.0%
AGCGATGGCCAAGGATCCTG+AGG + Chr1:97851944-97851963 MsG0180005944.01.T01:CDS 60.0%
ATGGAGATGAGGGTGGAGGG+AGG - Chr1:97851321-97851340 None:intergenic 60.0%
CGATGGCCAAGGATCCTGAG+GGG + Chr1:97851946-97851965 MsG0180005944.01.T01:CDS 60.0%
CTGACCCTCCATCTTCCCCA+GGG - Chr1:97853174-97853193 None:intergenic 60.0%
GAAAGCCCCCTCAGGATCCT+TGG - Chr1:97851955-97851974 None:intergenic 60.0%
GATGGCCAAGGATCCTGAGG+GGG + Chr1:97851947-97851966 MsG0180005944.01.T01:CDS 60.0%
GCGATGGCCAAGGATCCTGA+GGG + Chr1:97851945-97851964 MsG0180005944.01.T01:CDS 60.0%
GGGTGGCACGCGATTCAAAG+TGG - Chr1:97847980-97847999 None:intergenic 60.0%
GGTGCAGTTAGCGATGGCCA+AGG + Chr1:97851935-97851954 MsG0180005944.01.T01:CDS 60.0%
TCTGACCCTCCATCTTCCCC+AGG - Chr1:97853175-97853194 None:intergenic 60.0%
TGGAGATGAGGGTGGAGGGA+GGG - Chr1:97851320-97851339 None:intergenic 60.0%
TTCCCCAGGGCTCTCACCTT+TGG - Chr1:97853161-97853180 None:intergenic 60.0%
!! CGAGATAGCGGATAGGGGGA+TGG - Chr1:97849088-97849107 None:intergenic 60.0%
GAGAGCCCTGGGGAAGATGG+AGG + Chr1:97853166-97853185 MsG0180005944.01.T01:CDS 65.0%
GGTGAGAGCCCTGGGGAAGA+TGG + Chr1:97853163-97853182 MsG0180005944.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 97847082 97853732 97847082 ID=MsG0180005944.01;Name=MsG0180005944.01
Chr1 mRNA 97847082 97853732 97847082 ID=MsG0180005944.01.T01;Parent=MsG0180005944.01;Name=MsG0180005944.01.T01;_AED=0.38;_eAED=0.38;_QI=0|0.8|0.63|0.90|0.9|0.81|11|459|452
Chr1 exon 97847082 97847113 97847082 ID=MsG0180005944.01.T01:exon:10883;Parent=MsG0180005944.01.T01
Chr1 exon 97848186 97848347 97848186 ID=MsG0180005944.01.T01:exon:10884;Parent=MsG0180005944.01.T01
Chr1 exon 97849183 97849306 97849183 ID=MsG0180005944.01.T01:exon:10885;Parent=MsG0180005944.01.T01
Chr1 exon 97850066 97850148 97850066 ID=MsG0180005944.01.T01:exon:10886;Parent=MsG0180005944.01.T01
Chr1 exon 97850232 97850343 97850232 ID=MsG0180005944.01.T01:exon:10887;Parent=MsG0180005944.01.T01
Chr1 exon 97850435 97850503 97850435 ID=MsG0180005944.01.T01:exon:10888;Parent=MsG0180005944.01.T01
Chr1 exon 97850616 97850666 97850616 ID=MsG0180005944.01.T01:exon:10889;Parent=MsG0180005944.01.T01
Chr1 exon 97851771 97852050 97851771 ID=MsG0180005944.01.T01:exon:10890;Parent=MsG0180005944.01.T01
Chr1 exon 97852144 97852292 97852144 ID=MsG0180005944.01.T01:exon:10891;Parent=MsG0180005944.01.T01
Chr1 exon 97852373 97852426 97852373 ID=MsG0180005944.01.T01:exon:10892;Parent=MsG0180005944.01.T01
Chr1 exon 97853031 97853732 97853031 ID=MsG0180005944.01.T01:exon:10893;Parent=MsG0180005944.01.T01
Chr1 CDS 97847082 97847113 97847082 ID=MsG0180005944.01.T01:cds;Parent=MsG0180005944.01.T01
Chr1 CDS 97848186 97848347 97848186 ID=MsG0180005944.01.T01:cds;Parent=MsG0180005944.01.T01
Chr1 CDS 97849183 97849306 97849183 ID=MsG0180005944.01.T01:cds;Parent=MsG0180005944.01.T01
Chr1 CDS 97850066 97850148 97850066 ID=MsG0180005944.01.T01:cds;Parent=MsG0180005944.01.T01
Chr1 CDS 97850232 97850343 97850232 ID=MsG0180005944.01.T01:cds;Parent=MsG0180005944.01.T01
Chr1 CDS 97850435 97850503 97850435 ID=MsG0180005944.01.T01:cds;Parent=MsG0180005944.01.T01
Chr1 CDS 97850616 97850666 97850616 ID=MsG0180005944.01.T01:cds;Parent=MsG0180005944.01.T01
Chr1 CDS 97851771 97852050 97851771 ID=MsG0180005944.01.T01:cds;Parent=MsG0180005944.01.T01
Chr1 CDS 97852144 97852292 97852144 ID=MsG0180005944.01.T01:cds;Parent=MsG0180005944.01.T01
Chr1 CDS 97852373 97852426 97852373 ID=MsG0180005944.01.T01:cds;Parent=MsG0180005944.01.T01
Chr1 CDS 97853031 97853273 97853031 ID=MsG0180005944.01.T01:cds;Parent=MsG0180005944.01.T01
Chr1 three_prime_UTR 97853274 97853732 97853274 ID=MsG0180005944.01.T01:three_prime_utr;Parent=MsG0180005944.01.T01
Gene Sequence

>MsG0180005944.01.T01

ATGGAATTTTGGATTTTGAGGGGCGGATTCCCAAAGATAAAGATAAAGAGAAAGAGGGGCTTCAGGTCTATGGATCAAAAGATGGAAGGAACGTCTGCACCAGCAATTCGACGTGACCCTTACGAAGTTTTAGGCGTTTCGAAGGAATCATCCGATCAGGAAATTAAAACCGCTTACAGAAAACTTGCTCTCAAGTATCACCCTGACAAGAATGCCAACAATCCTGAAGCTTCAGAACTATTCAAAGAGGTTGCATATTCTTATAATATCTTATCTGACCCAGAAAAGAGAAGGCAGTACGACAGTGCAGGATTTGAGGCACTTGATGCTGATAGCATGGACATGGAAATCGATTTATCTAATCTTGGGACTGTGAACACAATGTTTGCAGCTTTATTCAGCAAGCTGGGTGTCCCAATCAAGACTACCATTTCGGCTAATGTTCTTGAAGAAGCTTTGAATGGCACTGTTACAGTCAGACCCCTTCCAATGGGAACATCTGTCAGTGGAAAGGTAGAGAAGCAATGTGCTCATTTTTTTGGTGTGACAATAAATGAGCAGCAAGCTGAGTCCGGGATTGTATTGCTCTATTTCGAACAAGATGCAAACGGGGGCTATGGTTTAGCATTGCAGGAAGATAGTGAGAAGACTGGCAAAGTGACATCTGCTGGAATGTATTTCTTACATTTTCAAGTGTACAGAATGGATTCAACTGTGAATGCGGTATGGATATTATGTCTATTTGGTTTCTTTTCTTTGTTGCGGGCTGTTTGGAAAGTGGTCACTTTTAGTGTTGTGGTGCAGTTAGCGATGGCCAAGGATCCTGAGGGGGCTTTCTTTAAAAGGTTGGAAGGTCTTCAACCTTGTGAAGTTTCGGAACTAAAGCCTGGCACACATATATTTGCCGTTTATGGCGATAACTTCTTTAAGACTGCTAGCTATACAATTGAAGCAGTATGTGCAAAATCACATGAAGATACCACCCAAAAACTTCAGGATATTGAGGCTCAAATTTTAAGAAAGAGGAATGAGCTACGGCAATTCGAATCAGAATATAGAAAGGCATTGGCACGCTATCAGGAAGTGACAGACAGATACACAAAAGAAAAACAGTCTGTAGATGAGCTTCTGAAGCAAAGGGACGGTATCCATTCTACCTTCACCATTGTCAAGCCAACCAGTACTAGTGGAAGTGGCAGTAATTTAAGCAATGGAAGTTCTAGCAAAATTTCTGGTGAAGATTCCAAAGGTGAGAGCCCTGGGGAAGATGGAGGGTCAGATAGTAAGGATAAATCAGGCAAAAAGAAATGGTTCAACCTCAATCTTAAGGGCTCGGGTTCTGATAAGAAGTTGATTTAA
Protein sequence

>MsG0180005944.01.T01

MEFWILRGGFPKIKIKRKRGFRSMDQKMEGTSAPAIRRDPYEVLGVSKESSDQEIKTAYRKLALKYHPDKNANNPEASELFKEVAYSYNILSDPEKRRQYDSAGFEALDADSMDMEIDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTVTVRPLPMGTSVSGKVEKQCAHFFGVTINEQQAESGIVLLYFEQDANGGYGLALQEDSEKTGKVTSAGMYFLHFQVYRMDSTVNAVWILCLFGFFSLLRAVWKVVTFSVVVQLAMAKDPEGAFFKRLEGLQPCEVSELKPGTHIFAVYGDNFFKTASYTIEAVCAKSHEDTTQKLQDIEAQILRKRNELRQFESEYRKALARYQEVTDRYTKEKQSVDELLKQRDGIHSTFTIVKPTSTSGSGSNLSNGSSSKISGEDSKGESPGEDGGSDSKDKSGKKKWFNLNLKGSGSDKKLI*